TCONS_00048268 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048268
Unique NameTCONS_00048268
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3162

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048268 ID=TCONS_00048268|Name=TCONS_00048268|organism=Clytia hemisphaerica|type=transcript|length=3162bp
AAGAATTTTTCGAACTCTTTTATGTTCGATTGTTataattaatattttct
ttttcacaccTCGCAACATGGACagattttgacgaaaaagaaATCAATTG
GCATCCAAAAGCATTGAATTATAGATTGTTAAGgatagaaaatgaagaag
ataggctttttgattttcctggTTGTGGCTTTTGTTGTAATCCAATCGGG
AGAATCAAAAACAGCTAAACGTGCAAAGAATCCTACGGTACCGAAGGTTG
GAAAGCCGATGAAAGACCCACAAGTTTCAACGAATAAGCAAGGGAAGAAA
CTCACCAAAAAACTTCCGATAACAGATGCCAAAGCATCAGATTATGGGAA
AGAGGAGATGAAAGGAATGAAGGAAACAAACACATACCGTGGAAGAAGCA
AATTTGAAACAGGTCCTGCGCCAAAATTTCCTGAAGCACCGACCACTTCT
GATGTAACTGCTCACGAAAGTGAAGTGAACGGATGTCGAGATCATCCTTT
AGCACAATGCAGTAAATGTTCCAGGGCTTGTTATGGACCAGAACATGAAA
CCTACttgttttcattctgcagaaAATCATGCGGCTTCTGCAACGAAAAA
ACAAATACTTTCCACAACTTTTGGAGATTGCGTGCTAATTCATCCTTCTC
ACCGACCTGGATGTTGAAAGAAGTGCGCATGTACCACGAGGGTGATGGAA
ATGTCAACTTAGCCAAAAATTCATCACGCGCTTTTGCAAGCTCCGAATAT
TCAGGTTTCAAAGCTTCATACGCCTTCGATAACAACAATGATACATACTG
GTACCCAGACCCCTATGGTCCAACACATACACCAGACAGTAGTGATTTCA
TTGGATTCGAATTTCCAGTCGCTGTTCGTATCCACGGCGTTCACCTTTTG
AACGATGCGAAATATCCTTCGGCCGCCCCTGATAATATTTTGGTCGAAGC
ATCAGATGATAAATCGAATGGTTGGGATGTTAAATGGGCTATCCACAACT
CAGAACACATCACTGATAAACGATTCGCAGTTCATGAATGTCCTGTCCTG
TGGAAGAAATATTACGACGCCGACAACACAGCATGGTGTTTCCGCTTGTT
TTCACAAGAAAAGTCATTTGAAGAAGCCAACGATATTTGTGAAGAAGAAG
GCGCTCAATTAGCAAGTGTTGTTTCTGAAGAACAAAAGTCGTTCATCCTT
AAAGATGTCAAGATCTGCTACAAAGCGTGGATTGGTTTACACAAAGAAGA
GAAAGCATATTATTGGCTTGACGGATCAGACTCGTTGTACCACAATTGGA
AAGAAGAACATTATACTGAAAGTCAACGAGATGATGACAAGTGTGTCCTT
ATGAATGAAGATGGAAAATGGGAATTGGAAAAATGTCAAGATAAAAATTA
CTTCAtttgcaaacaaaaaatgtACATTCGTCCAGAGGCGAAACCAGAAG
AAGTACCAAACGTGATGCCATACGAACCAGAAATTCCACCAATGATATTC
TACTATCCTCACGTCACTGAACCAGtCGCCAATACCAAACATTTACCACA
AGGTGTTTTCCCTGATAAGACGGGGAAATTCCCTGACGGCTCAGATGCAG
AAGATGACGATGAAGACACTGCAGTGTCAGCCATACTTTATAAACTCGCT
CTCAAAAATCTCGATGAAATTAAAGGACAAAAAGCACAAACTGGCACTAA
ACCGGAAGGATGGCAAGATCCAACCAACTTCACCATGAAAGTCGATGCCA
TCGCCAAGAAGCTTGGCAACGAAATGAACAAAAACAATAGTGACATCAAA
CCATCTAATCCATTGGACGTCGTTGCTCTTCCACAATTGAAGGAAATCGA
AACACCTAAATTGGACATGAGCAAGGTTCCAGGTGTCCCAAAATGGTCAC
ATGAAGATAGCACCAACAATGATAATGGAAAACAAACTGGGCTCACGTCA
CCAGTGATGCAAGGCAAGCCAGTATCTAACCAACAACCTAAAGATGATGA
TGATTCAGATGAAAATGATGATCAAAAAGACAAAGCTAATAAACAAACAA
CAGGTCAAGCCACACAATCTACAGGCCAGAAAATACAAGCACAAAATTTA
CCAGCAAGTATTGCAAACagtcaaaataatcaaaacaatcaaaagaacCC
AAGCGCTAATCCACCAAACCCCGTGCAACCAACCAAAGATCAAGCTAACA
AACAGCAGGATAAGAACCCACCCTCAGGATCGACCCAGGGACCCGTAGGT
AACGTGAAGCCACCTCCTACAGAGGAGCAAGGATCGAACCCAGATGCTTC
TGTTGGAGAAGCCGGTGAAGAAGGCAAAGAACAAAACGAAAAAGAGGacg
atgatgaagatgaagaggAAGATAAAAACGATCAAGATGAAGGAACCATT
GTTCCCAACAAACCTCCACAAAATAAAGACCAGAATCAAAAGAACGCACA
ATTAGCTGGCCAACAAAATACTAATTATCAAAATCGGTTGGTGAAGAACC
CATTGAGCAGATTACACATTGGACGTTCAAAAGTTGCCAGTACCGCAGAC
GCCGCTGAAAATGGCAGTGGATCTGGAGATGCTGAGACTAAAGAAATAAA
CGATATTTTAGACTCAATGAACAAAGAATAAAAATGTACAAATTGAATGG
GATCTTTATCAAGAAGAAACAATtacaaagaacatttttcttggACGAAG
AACGACATTTTGATGCTGTGATCGAAGTATTTAACGCATTGTAGTTTTTG
TACAAAGAAATAATTGTAAGCTAGGTACAAAGTACAAATGAGATTTTCTC
AGAATGGATTTCTCGCCTTAATTTTTTACCGTAATTATTCTCTGAAAGGG
AAATAATGATACCAACGGAATTGTGACTTACACGTGTCGAGGGGGATGGT
GATCTTCGCCCACGTATGAATTACCAGATTCGAAGGTAGTGTCTAAGTAT
CAGCAACAGTTTTTTTTGttaggaaatttatttttctaaaatgcaCAATG
ATTGCTAAATGTAGAACATagtttttttgtatttaaattttaagaaaata
gacaaaaatattattaatgaCATCGGTTAACTTACCCCTAGATATCAATA
AAGGTCTTCCTTACATATTTGTCGATGATAATTTCTAATGCTTTTTAAGA
AAGGCTTTTGTA
Run BLAST on NCBI

transcript from alignment at scaffold_142:52815..61725+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048268 ID=TCONS_00048268|Name=TCONS_00048268|organism=Clytia hemisphaerica|type=transcript|length=8911bp|location=Sequence derived from alignment at scaffold_142:52815..61725+ (Clytia hemisphaerica)
AAGAATTTTTCGAACTCTTTTATGTTCGATTGTTataattaatattttct
ttttcacaccTCGCAACATGGACagattttgacgaaaaagaaATCAATTG
GCATCCAAAAGCATTGAATTATAGATTGTTAAGGTATGCAACATTTTTGG
AATCAGAGGGTTTTGTTCAGATAGTCTTTCAGACATTTCGCCAAATTAAC
TTAACGTTCTTAATGGGTTGtacagaaaatgagtaaattatAGAAAGAGA
TCAAAACAGATCCCGGCTGATGgcttgaataaaaatttcatcgtgatttt
tattataatttcgCATGTaatatcaaagttttttttgcaaaactaGCTTT
CAACGAAAATTTCTCGCTCGGCTTTTAAATTGCTGAAATCCGcaaaaaat
ttcataagaatacgtataatataatttattttctttacaggatagaaaat
gaagaagataggctttttgattttcctggTTGTGGCTTTTGTTGTAATCC
AATCGGGTAAGAAAACAACACATTTATATCGGTGACACCTCGCTTTCAAT
CTTGTTGATAATTTCCAGCGCGATCAAGAGAAGATGAGAAGAAAAACCTA
GAATATTTTAGCTACTTTATATTTGTGAAGACTATGTGTTGTATCCTGCG
TTATGATACCTAGTAAGCTTCGAGCTATAGGTAGTACTATGTAATTAAAA
TCTCGATTGGTAATAGCACGTCCGACATAGTATTCATCGTTGTATTCCCC
AAGAAATTTCAGGGATGTCTACGATTCCAAAGAGGTCTAATCTTCACTTA
CAACATAAATTGAAAGTAGCATGCTCCGAAAAATTCCTAAGTTTTTAGAC
ATCTAAGGAATAGTTTCCAACGGAGGGCCATGTTTGAGTCAATTATAGAA
GATTTTACTCGATCGAAAACACCTACAGTtatactcaatttttacaattc
aAAATCTTCCAGGAGAATCAAAAACAGCTAAACGTGCAAAGAATCCTACG
GTACCGAAGGTTGGAAAGCCGATGAAAGACCCACAAGTTTCAACGAATAA
GCAAGGGAAGAAACTCACCAAAAAACTTCCGATAACAGATGCCAAAGCAT
CAGATTATGGGAAAGAGGAGATGAAAGGAATGAAGGAAACAAACACATAC
CGTGGAAGAAGCAAATTTGAAACAGGTCCTGCGCCAAAATTTCCTGAAGC
ACCGACCACTTCTGATGTAACTGCTCACGAAAGTaagaatttttcttata
aaatattgATCCAAATGAACGGGTCATTTTATTacaaacattttgttttt
tgttggaaTTCTAGGAAAGAGAAGACCACGTACGTAATGATTTCACTAAG
ATTTCAATTTCCTTGATTCGAAATcggaaatgaaaaaatttacaaatagc
aTAATCTAGAATCCCACACTAGAATCTGGTTGGCCTGGCCAAATAAATTC
TGAAAACTGTCTGAACATTCAATATTCTCAACAGGTGAAGTGAACGGATG
TCGAGATCATCCTTTAGCACAATGCAGTAAATGTTCCAGGGCTTGTTATG
GACCAGAACATGAAACCTACttgttttcattctgcagaaAATCATGCGGC
TTCTGCAACGAAAAAACAAATAGTAAGTACTATACAGGCTGTTTGTTTCT
AAGTCCATTCGTACTGCAGTTGGCTCTCCATATCTTGCACCTCCATAACT
CAAATTTCGCCATAAATCGAACAGCTTTTTCCTCACTGTTATTCAAACTC
CTCATTAGCCGTGCAATTACTGACAATATAGTGTAGTTATCATAAGATAC
GACTGTTcacattttctttcttcaagTAAGTATTAATCTCAAATTTTTCA
CCGTCTAACTACAGCTTTCCACAACTTTTGGAGATTGCGTGCTAATTCAT
CCTTCTCACCGACCTGGATGTTGAAAGAAGTGCGCATGTACCACGAGGGT
GATGGAAATGTCAACTTAGCCAAAAATTCATCACGCGCTTTTGCAAGCTC
CGAATATTCAGGTGagatttgtactagtaataacatggtttagaggggct
ttagagggtgatttgggattaataccttaagggaagaaattttcgccgAA
Gacattttcgcggaatttaatttcgcgaattcgggcataattcgcgaaat
taaattccgcgaaacacaccaaaattgttaaatcgcgaaattgaattccg
cgaaattcgattttttttcttcttcttttattttgttgtttttgaccagg
tattaccaaaaaagatggacacaattgatttttaagcattataacNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
ttgattggcttaaaaatttcgtacgatattttgttaaccaatcaaaatat
cgtacgatacttttctttcaaccaatagaaatttttgtttacatcagggg
ctattacggatttatcgccccgctcgtcctttacaaatctaagctaaata
taatcaaccatataattaggGGAAAAACACCTTGGAGATTTTTCAACGTA
TGGTTTAAATCTTAACTAGAAGACCAGTAAGAATTGAATCCAAATTCATA
TTTGAATTATAGTAGATGAGATGTCATTTGCTCTCATCTTGAATGCATGC
GTGAATGTGTCCAACATTAAACCCAAATTTATTCAACCCAAAATaatcaa
taatcaaaataaCAGGCAATCTTTGATCTACTTCATTCCCAGGTTTCAAA
GCTTCATACGCCTTCGATAACAACAATGATACATACTGGTACCCAGACCC
CTATGGTCCAACACATACACCAGACAGTAGTGATTTCATTGGATTCGAAT
TTCCAGTCGCTGTTCGTATCCACGGCGTTCACCTTTTGAACGATGCGAAA
TATCCTTCGGCCGCCCCTGATAATATTTTGGTCGAAGCATCAGATGATAA
ATCGAATGGTTGGGATGTTAAATGGGCTATCCACAACTCAGAACACATCA
CTGATAAACGATTCGCAGTTCATGGTAAGTGTGCACGGACGaagttgaaa
aagttttatatagttttaaatttcaaaatggtttgCAGTAGCGAGAACTG
TTAATACATATATGTCAATACATGAAAAATAATTGACCAGTAACACGCCA
TCAACAAACTGATCTCATCTTTTTAGAATGTCCTGTCCTGTGGAAGAAAT
ATTACGACGCCGACAACACAGCATGGTGTTTCCGCTTGTTTTCACAAGAA
AAGTCATTTGAAGAAGCCAACGATATTTGTGAAGAAGAAGGCGCTCAATT
AGCAAGTGTTGTTTCTGAAGAACAAAAGTCGTTCATCCTTAAAGATGTCA
AGATCTGCTAGTAAGCAAAGATATTTGGTCTTGTTAAGCTTTGAGTTTTA
ATCTTCTTACTTATGATATGTCTATTTGANTTGCTAGTAAGCAAGGATAT
TTGGTATTGTTAAGCTTTGAGTTTTAACCTTCTTATGATATGTCTATTTG
ATTCAAGTAATAAGAGGCTTGCATGTATACCATCTATACTTAAAGTGTAC
GTGATGAAAGATACCTTTTCTATTTATTGGGTCTGACTTCAATGAGCACT
TTGCAACATCAATCACAAAGAAGACAATACAAAAAGGGGTAATTCAACGA
ACCCTGACTCTTATACATAGCTCGTATATATGATGCTTTAGCGTTCACAT
ACATCAGTTCGCCGCACTGAAAAGTAGTGGAAGTGGCTCTGCTTTGCAAA
ATTTATAATCATAACTGATTTTTATATTGCACCATTTTTATCCCCTGTAT
TCCAGCAAAGCGTGGATTGGTTTACACAAAGAAGAGAAAGCATATTATTG
GCTTGACGGATCAGACTCGTTGTACCACAATTGGAAAGAAGAACATTATA
CTGAAAGTCAACGAGATGATGACAAGTGTGTCCTTATGAATGAAGATGGA
AAATGGGAATTGGAAAAATGTCAAGATAAAAATTACTTCAtttgcaaaca
aaaaatgtgtAAGTACCAGAAAATGACGGATTTCATACGAAAGAACCTAC
TTAAAAAACAACCATTATTTTTGGGTAAACCCATTGTGAAAGATGCAGAT
GAATTTGTCTAAAAGTcatgaaatttctttttaatcatcTATCAAAACCA
GTATCTAGGATAACATTCAGAGTTCTTAAACCAGCAACAATAAAGTAAGA
TGAATGCCTGTAGCCACTTGCTTCTAGAGATGTTGTACAGGCTACTCTAA
CCATCGTAAATTTCGAATGAGTCAGCCTAGTTTAAACCCCATTTCGGTCG
CGAAAGATTATTCTCAGTCTTATCGAGGATAacttttcaaatcatttttt
tccaacAGACATTCGTCCAGAGGCGAAACCAGAAGAAGTACCAAACGTGA
TGCCATACGAACCAGAAATTCCACCAATGATATTCTACTATCCTCACGTC
ACTGAACCAGGTGAAGCTTACCTAACAAAATTATGCAACTTCCCCGTTCA
CGTTATTTATGACCAGTGTTGCCATGGTGACGTAATGTAAAGGGTAGCAT
ATTCTGAATTAATAATATACCCACCACAAGGATTTCACGAAATTATGTAA
cttaactgttttttttttcacccaatacgtcacttgcaactaATCAGCTG
CCCTAAAAGTATCACCCTTTATTTTAAtaggaattttattttctttcagt
CGCCAATACCAAACATTTACCACAAGGTGTTTTCCCTGATAAGACNATTT
TAGTCGCCAATACCAAACATTTACCACAAGGTGTTTTCCCTGATAAGACG
GGGAAATTCCCTGACGGCTCAGATGCAGAAGATGACGATGAAGACACTGC
AGTGTCAGCCATACTTTATAAACTCGCTCTCAAAAATCTCGATGAAATTA
AAGGACAAAAAGCACAAACTGGCACTAAACCGGTGAGGCACAGTCTGTCA
CAAATCAATTTGCTTTCTATGTGTTCTTCTTTTTGGTCCTCAGGACCTGG
GATGGGATGACGATTCAAGTTTGTTAATTCATTGAGGAAAAAAAGCCGgt
ctgaaattaaaaataaatgcaCAATTTTAACAATTATTCTATTCACCTTT
CGATCTTTCTTCTGTACAGGAAGGATGGCAAGATCCAACCAACTTCACCA
TGAAAGTCGATGCCATCGCCAAGAAGCTTGGCAACGAAATGAACAAAAAC
AATAGTGACATCAAACCATCTAATCCATTGGACGTCGTTGCTCTTCCACA
ATTGAAGGAAATCGAAACACCTAAATTGGACATGAGCAAGGTTCCAGGTG
TCCCAAAATGGTCACATGAAGATAGCACCAACAATGATAATGGAAAACAA
ACTGGGGTAAGTTGGTTTAAGAGCTCTTTATTGCTAATATTCTCAGTTAT
GGTTAGAGAAATGGACCTTTAAGAGAAcaattttaagaacaataaggctc
aaaacctcaaaaactaacaacaatcaaagaaaaaggcTGAGTCTGTTATG
ATTAATGAGAAACAAAGTTTCATccaagaagaagaaacaaaacattttca
atgtaaaaaacACATCGTTTCACATGAGAATtcaactaaaaatcaaaaaa
ggtcCATATCGGGTTTTCAGCAACCTTTACCTATGCAAGCGAAATGGTTT
TTCTTCAATGAAAATTAAATGACCAAGTATCCAACccggctggcacacaa
cgttgtttcaacgttcacctaacgttatatggacgttatgaacattagat
aaacgttgaaacaacgatgtgtgccagctgggaaataAATAAACCCATGT
AAATTTTTGCAGCTCACGTCACCAGTGATGCAAGGCAAGCCAGTATCTAA
CCAACAACCTAAAGATGATGATGATTCAGATGAAAATGATGATCAAAAAG
ACAAAGCTAATAAACAAACAACAGGTATAAATAGTATCTTTATACTCTCT
GACATTCTCTTTGAATTTCCTGTTGCAAATCTATTCCTAGTAAACTTTGT
TGTAGGGATCTTTAAGATTAGGGTGTGGCTTAAACATATAGCCCTCCAGG
TAGACTGTCCATGCTCTTTATCattgataaataaaataaagtaaattttg
aaatgCGTAGGGATTTCACATCAGACTTAGAAACAAATACGTAGAAAATT
CTCATTCGACGAATCCCTTAACATGATTCATTCCCAGGTCAAGCCACACA
ATCTACAGGCCAGAAAATACAAGCACAAAATTTACCAGCAAGTATTGCAA
ACagtcaaaataatcaaaacaatcaaaagaacCCAAGCGCTAATCCACCA
AACCCCGTGCAACCAACCAAAGATCAAGCTAACAAACAGCAGGATAAGAA
CCCACCCTCAGGATCGACCCAGGGACCCGTAGGTAACGTGAAGCCACCTC
CTACAGAGGAGCAAGGATCGAACCCAGATGCTTCTGTTGGAGAAGCCGGT
GAAGAAGGCAAAGAACAAAACGAAAAAGGTGAGCTTCTTACCTTTTGACT
GTTTGCAATACTTCCTGCCAGTGGCGTTGTGGTAGGGGGGAGGGCacgcc
ccccccccagcggagctttttggaaggggcgccgaagagcgAGGGGCGCC
AAATAAGATTgttttaaacgccccaatcttaaaaatcatactttatgcgc
cttaaattgcgccccaagaccaattttactgaaatAATTTTACATTACTT
GCAATtgttttcgctcgcttcgctcgcaataaagtcaattggtaacttct
ttgcaatctagctaatttatgcctgggcaaatgaattagtaaaagtttag
aaactggtgggtTGGGCActtctttggaaaattgggggcgCCATTTTCAA
CAAATTGACTTTGGTCCCTCCAGAAAAACTTTCCCACGACGCCACTGCTT
CCTGCTTGTAATGTTGGTGTGCTCTGGGGCTTTGGAGAGgatgaacaaaa
agaaaagtgtTTTAATGTTCTTGATTTAATACAAAGTCACATGGCGTGGA
AAATTTTTATACAGAGACTAATATTAAAGTCATGCGATGTTCCCCGATAA
AAAGGATTTAGGAATCTCTTACAAGACTTTTTCAACCACCTAAAAGACAC
ATATGtgtctttcaaactttttaaactCCTCCAGCTCTTGTTCTACTTTA
GTTCACAAAAAGATAACTCGAAGATGGAGTGTCTTTAGATCCTTTGAACT
taccaatttttaattttcacactcCTCCACCCCTGCTTTTCTTTACTCTA
CAGAGGacgatgatgaagatgaagaggAAGATAAAAACGATCAAGATGAA
GGAACCATTGTTCCCAACAAACCTCCACAAAATAAAGACCAGAATCAAAA
GAACGCACAATTAGCTGGCCAACAAAATACTAATTGTAAGTTGTTCACAT
ATACCTTTCAACACTGGGTTCTAGTAATGATCAGCATTGGTATAAGAAAG
CCCTTGTCAATTTTAATCCCCTCGGAATAGCATACTGAATTGcaatctct
gaaaatttcgGCCATTCATCTCCAAGATCAACTCAACAATGCCTATGAAA
TGATAACTAATAAATAAATTCGAAAGGTTTATGCTTTAATCGGATGATTT
TCGCGAGATATAATTTTGCTAGTCAAAAAGAAAAGTCAGGATTTGATTTC
ACGTTTGTAGTGGTTCAACCCGAAAAAATACAGAATTTGGGATCCACGCA
GATCGAATTTCGCGAGTCTGGATTTTCAAgcgattttgcaaaaaaaattg
gcgAATCTTCGAAACGTCCATCCGATTAAAGTTTTGCATCCCGGTTAGAA
ATTATGATAGTAAAAACTTCCTTAGTTATACGAATCGTAATATCTTACCA
GAAGAAAACTGTTCTTTCTTTATAGATCAAAATCGGTTGGTGAAGAACCC
ATTGAGCAGATTACACATTGGACGTTCAAAAGTTGCCAGTACCGCAGACG
CCGCTGAAAATGGCAGTGGATCTGGAGATGCTGAGACTAAAGAAATAAAC
GATATTTTAGACTCAATGAACAAAGAATAAAAATGTACAAATTGAATGGG
ATCTTTATCAAGAAGAAACAATtacaaagaacatttttcttggACGAAGA
ACGACATTTTGATGCTGTGATCGAAGTATTTAACGCATTGTAGTTTTTGT
ACAAAGAAATAATTGTAAGCTAGGTACAAAGTACAAATGAGATTTTCTCA
GAATGGATTTCTCGCCTTAATTTTTTACCGTAATTATTCTCTGAAAGGGA
AATAATGATACCAACGGAATTGTGACTTACACGTGTCGAGGGGGATGGTG
ATCTTCGCCCACGTATGAATTACCAGATTCGAAGGTAGTGTCTAAGTATC
AGCAACAGTTTTTTTTGttaggaaatttatttttctaaaatgcaCAATGA
TTGCTAAATGTAGAACATagtttttttgtatttaaattttaagaaaatag
acaaaaatattattaatgaCATCGGTTAACTTACCCCTAGATATCAATAA
AGGTCTTCCTTACATATTTGTCGATGATAATTTCTAATGCTTTTTAAGAA
AGGCTTTTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030725XLOC_030725Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048268-exon-scaffold_142-1491911889:52815..52947TCONS_00048268-exon-scaffold_142-1491911889:52815..52947Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:52815..52947TCONS_00048268-exon-scaffold_142-1510915933:52815..52947Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:52815..52947TCONS_00048268-exon-scaffold_142-1575043694:52815..52947Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:53255..53320TCONS_00048268-exon-scaffold_142-1491911889:53255..53320Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:53255..53320TCONS_00048268-exon-scaffold_142-1510915933:53255..53320Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:53255..53320TCONS_00048268-exon-scaffold_142-1575043694:53255..53320Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:53777..54046TCONS_00048268-exon-scaffold_142-1491911889:53777..54046Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:53777..54046TCONS_00048268-exon-scaffold_142-1510915933:53777..54046Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:53777..54046TCONS_00048268-exon-scaffold_142-1575043694:53777..54046Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:54299..54436TCONS_00048268-exon-scaffold_142-1491911889:54299..54436Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:54299..54436TCONS_00048268-exon-scaffold_142-1510915933:54299..54436Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:54299..54436TCONS_00048268-exon-scaffold_142-1575043694:54299..54436Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:54679..54825TCONS_00048268-exon-scaffold_142-1491911889:54679..54825Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:54679..54825TCONS_00048268-exon-scaffold_142-1510915933:54679..54825Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:54679..54825TCONS_00048268-exon-scaffold_142-1575043694:54679..54825Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:55907..56188TCONS_00048268-exon-scaffold_142-1491911889:55907..56188Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:55907..56188TCONS_00048268-exon-scaffold_142-1510915933:55907..56188Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:55907..56188TCONS_00048268-exon-scaffold_142-1575043694:55907..56188Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:56341..56524TCONS_00048268-exon-scaffold_142-1491911889:56341..56524Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:56341..56524TCONS_00048268-exon-scaffold_142-1510915933:56341..56524Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:56341..56524TCONS_00048268-exon-scaffold_142-1575043694:56341..56524Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:56970..57172TCONS_00048268-exon-scaffold_142-1491911889:56970..57172Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:56970..57172TCONS_00048268-exon-scaffold_142-1510915933:56970..57172Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:56970..57172TCONS_00048268-exon-scaffold_142-1575043694:56970..57172Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:57523..57624TCONS_00048268-exon-scaffold_142-1491911889:57523..57624Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:57523..57624TCONS_00048268-exon-scaffold_142-1510915933:57523..57624Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:57523..57624TCONS_00048268-exon-scaffold_142-1575043694:57523..57624Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:57864..57890TCONS_00048268-exon-scaffold_142-1491911889:57864..57890Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:57864..57890TCONS_00048268-exon-scaffold_142-1510915933:57864..57890Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:57864..57890TCONS_00048268-exon-scaffold_142-1575043694:57864..57890Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:57945..58096TCONS_00048268-exon-scaffold_142-1491911889:57945..58096Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:57945..58096TCONS_00048268-exon-scaffold_142-1510915933:57945..58096Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:57945..58096TCONS_00048268-exon-scaffold_142-1575043694:57945..58096Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:58284..58520TCONS_00048268-exon-scaffold_142-1491911889:58284..58520Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:58284..58520TCONS_00048268-exon-scaffold_142-1510915933:58284..58520Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:58284..58520TCONS_00048268-exon-scaffold_142-1575043694:58284..58520Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:58977..59088TCONS_00048268-exon-scaffold_142-1491911889:58977..59088Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:58977..59088TCONS_00048268-exon-scaffold_142-1510915933:58977..59088Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:58977..59088TCONS_00048268-exon-scaffold_142-1575043694:58977..59088Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:59352..59642TCONS_00048268-exon-scaffold_142-1491911889:59352..59642Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:59352..59642TCONS_00048268-exon-scaffold_142-1510915933:59352..59642Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:59352..59642TCONS_00048268-exon-scaffold_142-1575043694:59352..59642Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:60418..60549TCONS_00048268-exon-scaffold_142-1491911889:60418..60549Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:60418..60549TCONS_00048268-exon-scaffold_142-1510915933:60418..60549Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:60418..60549TCONS_00048268-exon-scaffold_142-1575043694:60418..60549Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1491911889:61040..61725TCONS_00048268-exon-scaffold_142-1491911889:61040..61725Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1510915933:61040..61725TCONS_00048268-exon-scaffold_142-1510915933:61040..61725Clytia hemisphaericaexon
TCONS_00048268-exon-scaffold_142-1575043694:61040..61725TCONS_00048268-exon-scaffold_142-1575043694:61040..61725Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:52815..61725 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	15.3307	11.7118	64.4053	72.8287	13.4636	10.5971	36.49	26.8207	40.3543	33.8323	27.0689	84.1714	46.2382	47.8394	0	0	24.0292	26.6429	22.9622	22.7223	37.0616	39.3476	2.3254	0.689674	0.129764	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048268 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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