TCONS_00048301 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048301
Unique NameTCONS_00048301
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2657

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048301 ID=TCONS_00048301|Name=TCONS_00048301|organism=Clytia hemisphaerica|type=transcript|length=2657bp
TGTTTTGGTCAAAGTACTTGTTATACTTTTTTGGAAAGCATATTTTTTAC
CATCCAAACATTCAGGACTGTTGATTTTCTATATTCTGCATCAATTTAAC
TCAACCCATAGCCATAGTTTTTATATTAATGGGGTACTTAGTCATACTTT
TGTTGCCATTTTATCCTATTTTCTTATTACGTCAATCTTCAGGTAGGTCC
ATTTTAACATGTAGCTTGTTTACTCTTCATTTTTTATCTTAATCTTCTAA
TTTTTTTGAATCTATTAAAATGAAATTTAATCAAGATATCAAAATTGTAT
CAAAATTTGCAACCTTTTTTATCTCCATTGCAGATTATTTTGTGTCAGAA
TTTGCCAGATTTGACAAAGTGTGCTAACATTAAAGGATGTTCAAATATCC
TGTTTGAAGAGTTAGTCTAGGTAGTTCCAATTTTAAAAGTGCTCTAGAgc
aaattttctttaaagattaatataaacaaaattttctacttttactATTA
TAATAGacacaaaataaagaaaattcaaaatgtcttatCCACGAAACTAT
AGAATGCCAATGCCTCCCCAACAATATCAATCCTATAATCAACCACAAAG
ACAAAATTACCCACAGCAAAACAATACATCAAATTACCCCTCATCTTACC
CACAACAGTCCCAACAACCTACTCCGTACCCAACCACCCATGCGGCACCT
TACCCTACTTCAAGTGCACAGCCACCTTACCCAACACCAAACAGTACACA
ATCACGTCAACCAGCACCTTATCCTACATCGCAAGTTCAGTCAATGTCAA
TAAATAACACAACCACAACTAATAGTAATACAACAACGACCACATCACAT
TCAGAAGTTCAACAATGGCTTGAAAGTGCGACTAACAGTCTGAAAGCACT
GATCAAGGATGCAAGTAATGAGGAATTAAACCAACTGGTGGATAATGAAG
ATAAACTGATTGATTTGGTCCAAAGCTCAGAACAGGTCAAGAAAATGCAG
CGAAAAATCGAAGAAATGAGCAGCCAGATCAAGGATACAGCAGTCACCAA
TCTCTCTATGGAGCCTGAAGTCAGACATCTTCAAGAAGAAATTGTTCAAC
TAGCTAACCGTCAGAATGACCTCAAACAAAAATATGCTCAAATGCAAAGT
CAATTAAGTGGAAAAGTGTCTTTGGATGGAATGTTAGCCGTTCTTCAAGC
AGCTACCTCAGAGTCTGAAGAGGAATCAGAGAGCATCGCGCAAGCTTACA
TGGAAGCCGACGAAGGGGATGAACAGATTGATCAATTTGTCGAAGCTTAC
ATGAATAAACGTATCGAGTACCATTTACGGAAAgtcaaaagtgaaaaaat
ggTCGGCTTGGTAACAAACCCTAACCGTTCCACTATGAACAGTCCACCCG
GTGCCGCCCAACAACCACAATTGCCGCCCAGACAGGCAATGCCAAGTGCG
TATGGTTATGGGGGATATTGAATGAGTGGAAGAATTGTGTTGTTTTGGAA
TGGATGTTTGTCTTGTTGGTTTTTATCTGTCATCCTCCAACCTCTATCAC
TATGTTAATTAAAGAGACTTGatagatcttttcataaattaagtCACGAA
CCAGCATGAacaacgcttacctcgttttcaaaatattgctatagTTATTG
ATTCCGAGAGGAGTTCAAAAGAAGTTCCTCTATTTATAATTTAACAATTG
AAGCCTCagggatttaatcaccttggtaatggtttcaaaacgcgGCAGTC
GTTGCACTTCTATTAAAAAGAGAACCGAAATTCTAATTCCAAAAAATGGT
TATGAGACAAAATCTTCTTTTTATGGAACTCGTTAGAAAGAAGGAGAAAC
AACTTCCTCCGGTTATAAGTTGTGAACTTTTTTATTCATCACTATAAGGA
AAACTGTCtaagaattttattattttttgactGTATCGTGATTTAACCTG
TTTAAACTGTGTGCTATCGCGTGAAAGGGTACTCTTGGCTATCGCACAAT
AACACACATAGTTCCAATAGATAAGATTTCATCTCTAGTTTATTGTCACA
CACTTCCGCACGTTAGCACGCTATTGAAACCACGCTTATGatgttttcat
aatttttatgaTTCTCTTCAATGGGAGTACCCCCTTTTAAATCACTATTC
GCAAGCAGCTTTCAATGAATGTTTTACATGATTTCAAGTCAAGCAAGATA
TTGTTTTAGATGGTCGTAAGCACGTGTGGTCTCTCTTTCTCGGATGCTCC
CGTATAAAAGATTTGGGCTAAGGAAAACGATTTGATTTTTTCCATTATTA
CGTTCTTACTTCTTGGCACCTGGCCTTGACTCTAATTTGTTTCACTGACG
AAGTATAAATATTCTGGTCGCAGTGTCTGTGTCCGCGGAACATAGTGTAA
CAAAAAACATGATTATGAATATTATTTTAGCCGCATGGTATTTTTTATGC
TTAATCGTAAAATgacctttaaaaatattttgtaaatacaACAATTAAAT
ACATTAAAAGTTTTATCCGTGTCCTTCTTTTACAGTCGTTTCTCCAAGTT
CGGAAACTTTCATCCAGCTAAAGAATATTAtgagagtgatatcgtttgct
cactctttaattttaatttacaagctttttggacctaccccggtggaggt
cctataa
Run BLAST on NCBI

protein sequence of TCONS_00048301-protein

>TCONS_00048301-protein ID=TCONS_00048301-protein|Name=TCONS_00048301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MSYPRNYRMPMPPQQYQSYNQPQRQNYPQQNNTSNYPSSYPQQSQQPTPY
PTTHAAPYPTSSAQPPYPTPNSTQSRQPAPYPTSQVQSMSINNTTTTNSN
TTTTTSHSEVQQWLESATNSLKALIKDASNEELNQLVDNEDKLIDLVQSS
EQVKKMQRKIEEMSSQIKDTAVTNLSMEPEVRHLQEEIVQLANRQNDLKQ
KYAQMQSQLSGKVSLDGMLAVLQAATSESEEESESIAQAYMEADEGDEQI
DQFVEAYMNKRIEYHLRKVKSEKMVGLVTNPNRSTMNSPPGAAQQPQLPP
RQAMPSAYGYGGY
Run BLAST on NCBI

transcript from alignment at scaffold_142:600436..604560+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048301 ID=TCONS_00048301|Name=TCONS_00048301|organism=Clytia hemisphaerica|type=transcript|length=4125bp|location=Sequence derived from alignment at scaffold_142:600436..604560+ (Clytia hemisphaerica)
TGTTTTGGTCAAAGTACTTGTTATACTTTTTTGGAAAGCATATTTTTTAC CATCCAAACATTCAGGACTGTTGATTTTCTATATTCTGCATCAATTTAAC TCAACCCATAGCCATAGTTTTTATATTAATGGGGTACTTAGTCATACTTT TGTTGCCATTTTATCCTATTTTCTTATTACGTCAATCTTCAGGTAGGTCC ATTTTAACATGTAGCTTGTTTACTCTTCATTTTTTATCTTAATCTTCTAA TTTTTTTGAATCTATTAAAATGAAATTTAATCAAGATATCAAAATTGTAT CAAAATTTGCAACCTTTTTTATCTCCATTGCAGATTATTTTGTGTCAGAA TTTGCCAGATTTGACAAAGTGTGCTAACATTAAAGGATGTTCAAATATCC TGTTTGAAGAGTTAGTCTAGGTAGTTCCAATTTTAAAAGTGCTCTAGAgc aaattttctttaaagattaatataaacaaaattttctacttttactATTA TAATAGacacaaaataaagaaaattcaaaatgtcttatCCACGAAACTAT AGAATGCCAATGCCTCCCCAACAATATCAATCCTATAATCAACCACAAAG ACAAAATTACCCACAGCAAAACAATACATCAAATTACCCCTCATCTTACC CACAACAGTCCCAACAACCTACTCCGTACCCAACCACCCATGCGGCACCT TACCCTACTTCAAGTGCACAGCCACCTTACCCAACACCAAACAGTACACA ATCACGTCAACCAGCACCTTATCCTACATCGCAAGTTCAGTCAATGTCAA TAAATAACACAACCACAACTAATAGTAATACAACAACGACCACATCACAT TCAGAAGTTCAACAATGGCTTGAAAGTGCGACTAACAGTCTGAAAGCACT GATCAAGGATGCAAGTAATGAGGAATTAAACCAACTGGTGGATAATGAAG ATAAACTGATTGATTTGGTCCAAAGCTCAGAACAGGTATACAAATTATAA TGCTTGTTTGCTTTCCTTCCAGATCTTTTGAAAGCCATTAGTTCTAAGAC CAAAATTGTCTAACTATCTCATCCAATTCAATCAATGAATCATTTTACTT TAAATTATTTACTGTGTGTCTTGTAGAATAAGAGGcttttacaaataaat aaaatcaccAAAGNATTTTACTTCAAATTATTTACTGTGTGTCTTGTAGA ATAAGAGGCTTTTACAAATGAATAAAATCAccaaaatgaaaaaggaaata CCATAGTACAGCTCAGGGGGAACAGGTGTAAAACATTCTCGAGTTTAATG CGTGGAATAAATTTCTTTTGAGCTTTGGTTTCTTCTAAGTATACTGGGAG GttcaatgtttttattaaaGCATAAGCTGGATACTTATCTTTAAAGTGTT AATGTTTATTGAAAACCCAAAACGTGTaagacttcaaaataaaattaggt cctctttgtgataaaaatgatcattttcgtCTAAACCTTTTTAGGGCCCC AGAAGTAAGCAAATTATATTCGCTACATCGCCAATATCTATCAAACACCT TTCCACAAATCTTATATGACGGCTTTGGAAACCAGTAATCTTTCTAAGGA ATGAGAACGTGTTTGGAATCTTGTATGAATTTTGCTTTCCTCTTTTTACC AGGTCAAGAAAATGCAGCGAAAAATCGAAGAAATGAGCAGCCAGATCAAG GATACAGCAGTCACCAATCTCTCTATGGAGCCTGAAGTCAGACATCTTCA AGAAGAAATTGTTCAACTAGCTAACCGTCAGAATGACCTCAAACAAAAAT ATGCTCAAATGCAAAGTCAATTAAGTAAGTGATGTTAGGTATACTAATGA TGGATTTCTAacaaaatacttctttgaattAAAGCAGGTTGGTTGGATCG GAACCAAATATGGAAGCTCAATGAGAAATTATGAGCTCCTTCAGAAGTTT TTATCCGTTTCAATCCGTTTTCCTCCCCAAACGATAAAGCAGTGAATTAA AAATCAGAATAACTTGTTAGTTCTGGTCAATTGTATAATAGAATtgttat attcatgatatgtaccattgcaatggttttcacggacccaacagctgatt ggttgcaagtgacgtattggctgattttacgtcacttacaaccaatcagc tattgggtccatgatgatgtaatgtcagaagacattgcaatggtgcatat atCATGAATAAAGTGTTGTTAATAAGTTATGTAAATTTATTAATTGCTTG AGTTACGGGGAGTCTGTTCAATGTGAGTGTTTTTAGGCATAGTACCCTCA GTTTATATTTATTCGTCTTTTCATATTTTCTCTGCAGGTGGAAAAGTGTC TTTGGATGGAATGTTAGCCGTTCTTCAAGCAGCTACCTCAGAGTCTGAAG AGGAATCAGAGGTTAGTTCGTCACGTCGTGTGTTTTACaaagtttttgtt gtttttttaggtGAAATTATCAAGTGGGTAAATTTTCATGTGGTCGTTTT TGCGTGAATTGTTAATCTAAGATTTCGAATCGGtcgccttttttattttt caattcgtaCGGCGTGGTTTCAATCTAACCCTGCCTGGTgatctacttta aaaagtgaatTCAAATTGCCATTTTCAATTTCTGATTTTGCTGTAATTCC ATCATTTTACAGCAGTATAGCACACGTTTCTGTTTATTCTCCATTATAGA GCATCGCGCAAGCTTACATGGAAGCCGACGAAGGGGATGAACAGATTGAT CAATTTGTCGAAGCTTACATGAATAAACGTATCGAGTACCATTTACGGAA AgtcaaaagtgaaaaaatggTCGGCTTGGTAACAAACCCTAACCGTTCCA CTATGAACAGTCCACCCGGTGCCGCCCAACAACCACAATTGCCGCCCAGA CAGGCAATGCCAAGTGCGTATGGTTATGGGGGATATTGAATGAGTGGAAG AATTGTGTTGTTTTGGAATGGATGTTTGTCTTGTTGGTTTTTATCTGTCA TCCTCCAACCTCTATCACTATGTTAATTAAAGAGACTTGatagatctttt cataaattaagtCACGAACCAGCATGAacaacgcttacctcgttttcaaa atattgctatagTTATTGATTCCGAGAGGAGTTCAAAAGAAGTTCCTCTA TTTATAATTTAACAATTGAAGCCTCagggatttaatcaccttggtaatgg tttcaaaacgcgGCAGTCGTTGCACTTCTATTAAAAAGAGAACCGAAATT CTAATTCCAAAAAATGGTTATGAGACAAAATCTTCTTTTTATGGAACTCG TTAGAAAGAAGGAGAAACAACTTCCTCCGGTTATAAGTTGTGAACTTTTT TATTCATCACTATAAGGAAAACTGTCtaagaattttattattttttgact GTATCGTGATTTAACCTGTTTAAACTGTGTGCTATCGCGTGAAAGGGTAC TCTTGGCTATCGCACAATAACACACATAGTTCCAATAGATAAGATTTCAT CTCTAGTTTATTGTCACACACTTCCGCACGTTAGCACGCTATTGAAACCA CGCTTATGatgttttcataatttttatgaTTCTCTTCAATGGGAGTACCC CCTTTTAAATCACTATTCGCAAGCAGCTTTCAATGAATGTTTTACATGAT TTCAAGTCAAGCAAGATATTGTTTTAGATGGTCGTAAGCACGTGTGGTCT CTCTTTCTCGGATGCTCCCGTATAAAAGATTTGGGCTAAGGAAAACGATT TGATTTTTTCCATTATTACGTTCTTACTTCTTGGCACCTGGCCTTGACTC TAATTTGTTTCACTGACGAAGTATAAATATTCTGGTCGCAGTGTCTGTGT CCGCGGAACATAGTGTAACAAAAAACATGATTATGAATATTATTTTAGCC GCATGGTATTTTTTATGCTTAATCGTAAAATgacctttaaaaatattttg taaatacaACAATTAAATACATTAAAAGTTTTATCCGTGTCCTTCTTTTA CAGTCGTTTCTCCAAGTTCGGAAACTTTCATCCAGCTAAAGAATATTAtg agagtgatatcgtttgctcactctttaattttaatttacaagctttttgg acctaccccggtggaggtcctataa

Coding sequence (CDS) from alignment at scaffold_142:600436..604560+

>TCONS_00048301 ID=TCONS_00048301|Name=TCONS_00048301|organism=Clytia hemisphaerica|type=CDS|length=3768bp|location=Sequence derived from alignment at scaffold_142:600436..604560+ (Clytia hemisphaerica)
atgtcttatCCACGAAACTATAGAATGCCAATGCCTCCCCAACAATATCA
ATCCTATAATCAACCACAAAGACAAAATTACCCACAGCAAAACAATACAT
CAAATTACCCCTCATCTTACCCACAACAGTCCCAACAACCTACTCCGTAC
CCAACCACCCATGCGGCACCTTACCCTACTTCAAGTGCACAGCCACCTTA
CCCAACACCAAACAGTACACAATCACGTCAACCAGCACCTTATCCTACAT
CGCAAGTTCAGTCAATGTCAATAAATAACACAACCACAACTAATAGTAAT
ACAACAACGACCACATCACATTCAGAAGTTCAACAATGGCTTGAAAGTGC
GACTAACAGTCTGAAAGCACTGATCAAGGATGCAAGTAATGAGGAATTAA
ACCAACTGGTGGATAATGAAGATAAACTGATTGATTTGGTCCAAAGCTCA
GAACAGGTCAAGAAAATGCAGCGAAAAATCGAAGAAATGAGCAGCCAGAT
CAAGGATACAGCAGTCACCAATCTCTCTATGGAGCCTGAAGTCAGACATC
TTCAAGAAGAAATTGTTCAACTAGCTAACCGTCAGAATGACCTCAAACAA
AAATATGCTCAAATGCAAAGTCAATTAAGTGGAAAAGTGTCTTTGGATGG
AATGTTAGCCGTTCTTCAAGCAGCTACCTCAGAGTCTGAAGAGGAATCAG
AGAGCATCGCGCAAGCTTACATGGAAGCCGACGAAGGGGATGAACAGATT
GATCAATTTGTCGAAGCTTACATGAATAAACGTATCGAGTACCATTTACG
GAAAgtcaaaagtgaaaaaatggTCGGCTTGGTAACAAACCCTAACCGTT
CCACTATGAACAGTCCACCCGGTGCCGCCCAACAACCACAATTGCCGCCC
AGACAGGCAATGCCAAGTGCGTATGGTTATGGGGGATATTGAatgtctta
tCCACGAAACTATAGAATGCCAATGCCTCCCCAACAATATCAATCCTATA
ATCAACCACAAAGACAAAATTACCCACAGCAAAACAATACATCAAATTAC
CCCTCATCTTACCCACAACAGTCCCAACAACCTACTCCGTACCCAACCAC
CCATGCGGCACCTTACCCTACTTCAAGTGCACAGCCACCTTACCCAACAC
CAAACAGTACACAATCACGTCAACCAGCACCTTATCCTACATCGCAAGTT
CAGTCAATGTCAATAAATAACACAACCACAACTAATAGTAATACAACAAC
GACCACATCACATTCAGAAGTTCAACAATGGCTTGAAAGTGCGACTAACA
GTCTGAAAGCACTGATCAAGGATGCAAGTAATGAGGAATTAAACCAACTG
GTGGATAATGAAGATAAACTGATTGATTTGGTCCAAAGCTCAGAACAGGT
CAAGAAAATGCAGCGAAAAATCGAAGAAATGAGCAGCCAGATCAAGGATA
CAGCAGTCACCAATCTCTCTATGGAGCCTGAAGTCAGACATCTTCAAGAA
GAAATTGTTCAACTAGCTAACCGTCAGAATGACCTCAAACAAAAATATGC
TCAAATGCAAAGTCAATTAAGTGGAAAAGTGTCTTTGGATGGAATGTTAG
CCGTTCTTCAAGCAGCTACCTCAGAGTCTGAAGAGGAATCAGAGAGCATC
GCGCAAGCTTACATGGAAGCCGACGAAGGGGATGAACAGATTGATCAATT
TGTCGAAGCTTACATGAATAAACGTATCGAGTACCATTTACGGAAAgtca
aaagtgaaaaaatggTCGGCTTGGTAACAAACCCTAACCGTTCCACTATG
AACAGTCCACCCGGTGCCGCCCAACAACCACAATTGCCGCCCAGACAGGC
AATGCCAAGTGCGTATGGTTATGGGGGATATTGAatgtcttatCCACGAA
ACTATAGAATGCCAATGCCTCCCCAACAATATCAATCCTATAATCAACCA
CAAAGACAAAATTACCCACAGCAAAACAATACATCAAATTACCCCTCATC
TTACCCACAACAGTCCCAACAACCTACTCCGTACCCAACCACCCATGCGG
CACCTTACCCTACTTCAAGTGCACAGCCACCTTACCCAACACCAAACAGT
ACACAATCACGTCAACCAGCACCTTATCCTACATCGCAAGTTCAGTCAAT
GTCAATAAATAACACAACCACAACTAATAGTAATACAACAACGACCACAT
CACATTCAGAAGTTCAACAATGGCTTGAAAGTGCGACTAACAGTCTGAAA
GCACTGATCAAGGATGCAAGTAATGAGGAATTAAACCAACTGGTGGATAA
TGAAGATAAACTGATTGATTTGGTCCAAAGCTCAGAACAGGTCAAGAAAA
TGCAGCGAAAAATCGAAGAAATGAGCAGCCAGATCAAGGATACAGCAGTC
ACCAATCTCTCTATGGAGCCTGAAGTCAGACATCTTCAAGAAGAAATTGT
TCAACTAGCTAACCGTCAGAATGACCTCAAACAAAAATATGCTCAAATGC
AAAGTCAATTAAGTGGAAAAGTGTCTTTGGATGGAATGTTAGCCGTTCTT
CAAGCAGCTACCTCAGAGTCTGAAGAGGAATCAGAGAGCATCGCGCAAGC
TTACATGGAAGCCGACGAAGGGGATGAACAGATTGATCAATTTGTCGAAG
CTTACATGAATAAACGTATCGAGTACCATTTACGGAAAgtcaaaagtgaa
aaaatggTCGGCTTGGTAACAAACCCTAACCGTTCCACTATGAACAGTCC
ACCCGGTGCCGCCCAACAACCACAATTGCCGCCCAGACAGGCAATGCCAA
GTGCGTATGGTTATGGGGGATATTGAatgtcttatCCACGAAACTATAGA
ATGCCAATGCCTCCCCAACAATATCAATCCTATAATCAACCACAAAGACA
AAATTACCCACAGCAAAACAATACATCAAATTACCCCTCATCTTACCCAC
AACAGTCCCAACAACCTACTCCGTACCCAACCACCCATGCGGCACCTTAC
CCTACTTCAAGTGCACAGCCACCTTACCCAACACCAAACAGTACACAATC
ACGTCAACCAGCACCTTATCCTACATCGCAAGTTCAGTCAATGTCAATAA
ATAACACAACCACAACTAATAGTAATACAACAACGACCACATCACATTCA
GAAGTTCAACAATGGCTTGAAAGTGCGACTAACAGTCTGAAAGCACTGAT
CAAGGATGCAAGTAATGAGGAATTAAACCAACTGGTGGATAATGAAGATA
AACTGATTGATTTGGTCCAAAGCTCAGAACAGGTCAAGAAAATGCAGCGA
AAAATCGAAGAAATGAGCAGCCAGATCAAGGATACAGCAGTCACCAATCT
CTCTATGGAGCCTGAAGTCAGACATCTTCAAGAAGAAATTGTTCAACTAG
CTAACCGTCAGAATGACCTCAAACAAAAATATGCTCAAATGCAAAGTCAA
TTAAGTGGAAAAGTGTCTTTGGATGGAATGTTAGCCGTTCTTCAAGCAGC
TACCTCAGAGTCTGAAGAGGAATCAGAGAGCATCGCGCAAGCTTACATGG
AAGCCGACGAAGGGGATGAACAGATTGATCAATTTGTCGAAGCTTACATG
AATAAACGTATCGAGTACCATTTACGGAAAgtcaaaagtgaaaaaatggT
CGGCTTGGTAACAAACCCTAACCGTTCCACTATGAACAGTCCACCCGGTG
CCGCCCAACAACCACAATTGCCGCCCAGACAGGCAATGCCAAGTGCGTAT
GGTTATGGGGGATATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030744XLOC_030744Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048301-exon-scaffold_142-1491911889:600436..601420TCONS_00048301-exon-scaffold_142-1491911889:600436..601420Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1510915933:600436..601420TCONS_00048301-exon-scaffold_142-1510915933:600436..601420Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1575043694:600436..601420TCONS_00048301-exon-scaffold_142-1575043694:600436..601420Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1491911889:602088..602259TCONS_00048301-exon-scaffold_142-1491911889:602088..602259Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1510915933:602088..602259TCONS_00048301-exon-scaffold_142-1510915933:602088..602259Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1575043694:602088..602259TCONS_00048301-exon-scaffold_142-1575043694:602088..602259Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1491911889:602773..602846TCONS_00048301-exon-scaffold_142-1491911889:602773..602846Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1510915933:602773..602846TCONS_00048301-exon-scaffold_142-1510915933:602773..602846Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1575043694:602773..602846TCONS_00048301-exon-scaffold_142-1575043694:602773..602846Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1491911889:603135..604560TCONS_00048301-exon-scaffold_142-1491911889:603135..604560Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1510915933:603135..604560TCONS_00048301-exon-scaffold_142-1510915933:603135..604560Clytia hemisphaericaexon
TCONS_00048301-exon-scaffold_142-1575043694:603135..604560TCONS_00048301-exon-scaffold_142-1575043694:603135..604560Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048301-proteinTCONS_00048301-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:600436..604560 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.9105 40.7407 78.4223 77.6079 37.0758 29.8094 30.874 34.8695 21.2865 25.6995 28.94 17.0936 23.1387 25.0543 18.7794 18.5988 24.0553 25.7368 28.0802 26.9223 29.2417 29.1705 23.2968 25.6066 28.0869 30.7595 27.8386 22.0072 24.2747 24.4683
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009851Mod_r
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048301 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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