TCONS_00048539 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048539
Unique NameTCONS_00048539
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1660

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048539 ID=TCONS_00048539|Name=TCONS_00048539|organism=Clytia hemisphaerica|type=transcript|length=1660bp
TcttagcaaaataaaaaatgtcatcaCTTTCAAGAACCACAAATTCAGAT
TCAAGAATCTATGTTGGTAATTTACCACAATTTGTGCGACAAAGAGACTT
GGAGGATCATTTTGATCGATATGGTAAGGTGAGGGGTATTGATATACACA
GCAGATTTGATCCCGCTTTCGCCTTCATTGAATTTGAAGATTCTCGGGAT
GCTGATGATGCAGTATATGGAGAAGATGGCAAAAGGTTTGACGGAAACAG
AATAAAAGTTCAATTTCCAAGAGGAACTCCAAGAGATTCATCTGGCAGAG
GAAGAGGTAGTTCCCGTGGAGGTCGAGGTCCACCTGGAGGAAGCCGTGGA
GGTCGGGGTGGTAGAGGTCCACCCTCTAGAACTGATCATCGTATCATTGT
ATCTGGATTACCAAAATCAGGCAGTTGGCAAGATTTAAAAGATCACATGC
GAGAAGCTGGTGAAGTTGTTTATGCTGATGTTTATAAGGATGGCACTGCG
GTCTGTGAATTCAAAAGTTCTAGCGATATGAAATGGGCTCTCAAGAACTT
AGACGACACAAAATTTAAATCACATGAGCTGGGAACCTCTCTCAGTTACA
CAACCACATCCATCTCATTGATGTTGGGATAATAAAACATAAACCAGACA
GGATACAAAGGAGAAAATTTCCACAGGATCATTCCCTAAGACCTACAAGG
AGCAAGCCAAATAAACAAACCACAACCCAGATGGTCATAAAAGGAAAACC
CCTTGTCCCTCCATGAGCAAATCTGTAAAAGGCACACACCATGTGAAAag
ccagaaaaaaggaaaaccttAATGCTAGATGTGAGGTCAACTATCAATCC
AAGGAAATCCCAGAAGGCAAAAAAGAAAACCCTTAATCAAAAAGGAGCAA
ATACTTCCAAAAACCGAAAGGATTTAGCTGTAAATAAGGAAGACCTATTC
CAAAAACATCAGGAGTTGGATACTGTACATAAATAAATAGGATTAGTTTA
AGATAAATCCACAGGAGGATAAAGCCATATTTCATTTCTTGaacGAAACT
TCATACATTCGCATAAAACAAGACAAATCACGATCTTCAAAATCTCGAAC
TAGAAGCAGATCTCCAAGAAGAAGCCGCTCACCAAGGAGAAGATCTAGAT
CACGCTCAAGATCAAAGTCACCGAAGAAAAGTAGCAGAAGCCCAAGCCGT
AGCAAAAGCCGTAGCAAGAGCAGAAGTAGAAGTCGATCACCACAAAAAAG
CAAAAGCAGAAGTCTTAGTGTAAGCCGTAGCCGTAGCAGGAGTCGCAGTC
GCAGCAGAAGTAAAAGCCAATGAGAATTGTCTTGTGAGGCACTAACGATT
TTAAAACATGCAAATAGCTGTCTATcatatgtttaaaaaaagcgAAACTT
CATATTTCTAGGATTTTTTTATCaggaaactttttttaaaccaaATTGTA
AAGCACTTACATgaactttttttttgcatttacttgtaacaaaaatttac
tgctttttatttaagttttcatttttatcattgtaatattttgcttttta
ctgtggtaattttttttatattatgctACTATAGCTAGTAGTTTTTAAGA
TTACTTTGTGACTAGATGGAATTAGACTTTGGCAtatgtataaaaatttg
aaatacaaaC
Run BLAST on NCBI

protein sequence of TCONS_00048539-protein

>TCONS_00048539-protein ID=TCONS_00048539-protein|Name=TCONS_00048539-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
MSSLSRTTNSDSRIYVGNLPQFVRQRDLEDHFDRYGKVRGIDIHSRFDPA
FAFIEFEDSRDADDAVYGEDGKRFDGNRIKVQFPRGTPRDSSGRGRGSSR
GGRGPPGGSRGGRGGRGPPSRTDHRIIVSGLPKSGSWQDLKDHMREAGEV
VYADVYKDGTAVCEFKSSSDMKWALKNLDDTKFKSHELGTSLSYTTTSIS
LMLG
Run BLAST on NCBI

transcript from alignment at scaffold_143:84471..89236-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048539 ID=TCONS_00048539|Name=TCONS_00048539|organism=Clytia hemisphaerica|type=transcript|length=4766bp|location=Sequence derived from alignment at scaffold_143:84471..89236- (Clytia hemisphaerica)
TCTTAGCAAAATAAAAAATGTCATCACTTTCAAGAACCACAAATTCAGAT
TCAAGAATCTATGTTGGTAATTTACCACAATTTGTGCGACAAAGAGACTT
GGAGGATCATTTTGATCGATATGGTAAGGTGAGGGGTATTGATATACACA
GCAGATTTGATCCCGCTTTCGCCTTCATTGAATTTGAAGATTCTCGGTAA
GTATATTGCTCTCTCAAGGCTTACAAGAAATACTTGCATTATTTCATTTA
CCTCAATGTGCATTTTTTCCATGAGCTTTCGCTTTGGTTTGTGCAATCTG
TTTTTTAAACTACTTTCATGCAATACATTGGGCTAATTATTACATGGATA
TACTGGGATATAGGCTTACATAGCATCAAGCTGCCTGTCATTAAAGAAGA
TTAATTGTGACATAAAGAAGCTCTATTTGCATAGAAAATCTAGGGGATTA
AATAATATTGGCTGGGTAGTTCAACTCAATGAGGACACTATACTTTGTTG
AAGATGTTACCCTTTTCGAAGGAATATAACAACCTTATTGCAAAGCTCAA
AAACTGATCATCTTTTATTTCAAAATTGAGATGCTCTTTTTCTTAGAAAA
CATTTGGAATTTATCCTTTTTTGCTAAATTTATTTATTCTGAATATTTTT
TATTCAGGGATGCTGATGATGCAGTATATGGAGAAGATGGCAAAAGGTTT
GACGGAAACAGAATAAAAGTTCAATTTCCAAGAGGAACTCCAAGAGATTC
ATCTGGCAGAGGAAGAGGTAGTTCCCGTGGAGGTCGAGGTCCACCTGGAG
GAAGCCGTGGAGGTCGGGGTGGTAGAGGTCCACCCTCTAGAACTGATCAT
CGTATCATTGTATCTGGATTACCAAAATCAGGCAGTTGGCAAGATTTAAA
AGATCACATGCGAGAAGCTGGTGAAGTTGTTTATGCTGATGTTTATAAGG
ATGGCACTGCGGTCTGTGAATTCAAAAGTTCTAGTGATATGAAATGGGCT
CTCAAGAATTTAGACGACACAAAATTTAAATCACATGAGGTATTTACACA
TTGATTGTATCAGCTCATTTTCTTTTAGGTTCTTACATTAGTTTCCATTC
CATTCTCATAAAAGAAGTATTTACTACCTAGGCTTTAAATTCCTCCTCAT
TTAATTTACTTACCTTTTANCTAGGGGCTAAAAAATCTGAAAATTTTCTG
ACCCTCGGCCCCAACCATGGTGGGGCCTACAGGTGTCACTGTATACCAAA
TTACTTTAGGTGTACAAACTTTCGCGAGCAGAAACTTTCGCAATTTTCGC
GAATTTTGGCCCTTTTCGCGAAAGTAAATGTATTCAAAAATTCTAGGAAG
GACCATTCGCGAAAGTTTATGCTCGCGAAAAATTCTTGACAAAATAGATA
ATTTGTAAATCTTCAAACTTTGACTATAAGACTAATAAGTCAAAGGACAA
ATGTTTTAAGCCAATCCAAGAAGTATTTGTCCCTCTAAGCCATTTTTGCA
TGTGAAAATTCTCTATTCTACGTCTTGATTCGCGAAAGTTTATGCTCGCG
AAATATATTTTCATTCAATTCGCGAAAGTAAATGTCGTGAATTTCGCGAT
TTTTCGTCCTCGCGAAAGTTTCTGCTCGCGAAAGTCGAATCTTATGCAGA
ACGACAGTACAACATAAAGCAAAAAGTGGAAACTGATGGCTCACGTATTC
AAAATTGAATGTCTTTTGTGTTGTGATGCTTTTAAAGTGTGCTGATTATC
TCATTGTTCAAATTGTTATCTTAGCAAAATAAAAAATGTCGTCACTTTCA
AGAACCACAAATTCAGATTCAAGAATCTATGTTGGTAATTTACCACAATT
TGTGCGTCAAAGAGACTTGGAGGACCATTTTGATCGATATGGTAAGGTGA
GGGGTATTGATATACACAGCAGATTTGATCCCGCTTTCGCCTTCATTGAA
TTTGAAGATTCTCGGTAAGTATATTGCTCTCTCAAGGCTTACAAGAAATA
CTTGCATTATTTCATTTACCTCAATGTGCATTTTTTCCATGAGCTTTCGC
TTTGGTTTTTGCAATCTGTTTTTTAAACTACTTTCATGCAATACATTGGG
CTAATTATTACATGGATATACTGGGATATAGGCTTACATAGCATCAAGCT
GCCTGTCATTAAAGAAGATTAATTGTGACATAAAGAAGCTCTATTTGCAT
AGAAAATCTAGGGGATTAAATAATATTGGCTGGGTAGTTCAACTCAATGA
GGACACTATACTTTGTTGAAGATGTTACCCTTTTCGAAGGAATATAACAA
CCTTATTGCAAAGCTCAAAAACTGATCATCTTTTATTTCAAAATTGAGAT
GCTCTTTTTCTTAGAAAACATTTGGAATTTATCCTTTTTTGCTAAATTTA
TTTATTCTGAATATTTTTTATTCAGGGATGCTGATGATGCAGTATATGGA
GAAGATGGCAAAAGGTTTGACGGAAACAGAATAAAAGTTCAATTTCCAAG
AGGAACTCCAAGAGATTCATCTGGCAGAGGAAGAGGTAGTTCCCGTGGAG
GTCGAGGTCCACCTGGAGGAAGCCGTGGAGGTCGGGGTGGTAGAGGTCCA
CCCTCTAGAACTGATCATCGTATCATTGTATCTGGATTACCAAAATCAGG
CAGTTGGCAAGATTTAAAAGATCACATGCGAGAAGCTGGTGAAGTTGTTT
ATGCTGATGTTTATAAGGATGGCACTGCGGTCTGTGAATTCAAAAGTTCT
AGCGATATGAAATGGGCTCTCAAGAACTTAGACGACACAAAATTTAAATC
ACATGAGGTATTTACACATTGATTGTATCAGCTCATTTTCTTTTTGGTTC
TTACATTAGTTTCCATTCCATTCTCATAAAAGAAGTATTTACTACCTAGG
CTTTAAATTCCTCCTCATTTAATTTACTTACCTTTTATAAACACTTTAGA
AAATCCATTATAGTAAATTCATGTTTATCAAACCAAACCATGTGAAGATG
ATGAACAATATAAATTAGGCTGACATATTCTGTAATAGATGATACAATCA
AGCTAGACTATTATTATTTTCCAAATTAAAACAGAAAACTTTTTTATTTT
GTTACTAGCTGGGAACCTCTCTCAGTTACACAACCACATCCATCTCATTG
ATGTTGGGATAATAAAACATAAACCAGACAGGATACAAAGGAGAAAATTT
CCACAGGATCATTCCCTAAGACCTACAAGGAGCAAGCCAAATAAACAAAC
CACAACCCAGATGGTCATAAAAGGAAAACCCCTTGTCCCTCCATGAGCAA
ATCTGTAAAAGGCACACACCATGTGAAAAGCCAGAAAAAAGGAAAACCTT
AATGCTAGATGTGAGGTCAACTATCAATCCAAGGAAATCCCAGAAGGCAA
AAAAGAAAACCCTTAATCAAAAAGGAGCAAATACTTCCAAAAACCGAAAG
GATTTAGCTGTAAATAAGGAAGACCTATTCCAAAAACATCAGGAGTTGGA
TACTGTACATAAATAAATAGGATTAGTTTAAGATAAATCCACAGGAGGAT
AAAGCCATATTTCATTTCTTGGTAAAACTGTTTTATATATTTTTAACATT
GATTTTTTAAATTTAGAAAATATGATCTTCTTAAGTCTTAAGATTCTATA
TTGATTAAACTCAAATTAAAATCTTCTTTTTTTTAAAACACATAGTTGCT
ATACTACCTTTTTTTAAATCAATGATTTTGAAATTAAAATTCTGTAGTTA
ATTTACTATGAAGAATTTGTAGCCTTTAGGAACTTTTAGCAATTTAACGT
TGTTTATTTCATTTTCAGAACGAAACTTCATACATTCGCATAAAACAAGA
CAAATCACGATCTTCAAAATCTCGAACTAGAAGCAGATCTCCAAGAAGGT
AAAAATAATTTAGTAATATAGTGTTTTCAAAGTTTTCAAAGTTGTTTTCT
TCTCATAGACAGCCAAAAAAGGCAAATTCATTTATCGAAAGTCTCACGCT
CAGTCAGCTAATAATAAAATGTCTACATCATTGAAGCTTACAATATAAAT
TTGAAAATATTCCTTTTTCTATAAATAGGTTGGGAAATAATTAGTTTATC
TAGCAAGGTCAGTGAAAACTTGTTGGTGTTGACACAATGTCGGTGTTAAA
GTATTAATTAAAAAAGTAAGTAACTTTAAAAAGTTAATCTCTTTTGAAAA
TGTAATAAAGATGATTATTCTTTTTAGAAGCCGCTCACCAAGGAGAAGAT
CTAGATCACGCTCAAGATCAAAGTCACCGAAGAAAAGTAGCAGAAGCCCA
AGCCGTAGCAAAAGCCGTAGCAAGAGCAGAAGTAGAAGTCGATCACCACA
AAAAAGCAAAAGCAGAAGTCTTAGTGTAAGCCGTAGCCGTAGCAGGAGTC
GCAGTCGCAGCAGAAGTAAAAGCCAATGAGAATTGTCTTGTGAGGCACTA
ACGATTTTAAAACATGCAAATAGCTGTCTATCATATGTTTAAAAAAAGCG
AAACTTCATATTTCTAGGATTTTTTTATCAGGAAACTTTTTTTAAACCAA
ATTGTAAAGCACTTACATGAACTTTTTTTTTGCATTTACTTGTAACAAAA
ATTTACTGCTTTTTATTTAAGTTTTCATTTTTATCATTGTAATATTTTGC
TTTTTACTGTGGTAATTTTTTTTATATTATGCTACTATAGCTAGTAGTTT
TTAAGATTACTTTGTGACTAGATGGAATTAGACTTTGGCATATGTATAAA
AATTTGAAATACAAAC

Coding sequence (CDS) from alignment at scaffold_143:84471..89236-

>TCONS_00048539 ID=TCONS_00048539|Name=TCONS_00048539|organism=Clytia hemisphaerica|type=CDS|length=1845bp|location=Sequence derived from alignment at scaffold_143:84471..89236- (Clytia hemisphaerica)
CTGGGAACCTCTCTCAGTTACACAACCACATCCATCTCATTGATGTTGGG
ATAAGGATGCTGATGATGCAGTATATGGAGAAGATGGCAAAAGGTTTGAC
GGAAACAGAATAAAAGTTCAATTTCCAAGAGGAACTCCAAGAGATTCATC
TGGCAGAGGAAGAGGTAGTTCCCGTGGAGGTCGAGGTCCACCTGGAGGAA
GCCGTGGAGGTCGGGGTGGTAGAGGTCCACCCTCTAGAACTGATCATCGT
ATCATTGTATCTGGATTACCAAAATCAGGCAGTTGGCAAGATTTAAAAGA
TCACATGCGAGAAGCTGGTGAAGTTGTTTATGCTGATGTTTATAAGGATG
GCACTGCGGTCTGTGAATTCAAAAGTTCTAGCGATATGAAATGGGCTCTC
AAGAACTTAGACGACACAAAATTTAAATCACATGAGATGTCATCACTTTC
AAGAACCACAAATTCAGATTCAAGAATCTATGTTGGTAATTTACCACAAT
TTGTGCGACAAAGAGACTTGGAGGATCATTTTGATCGATATGGTAAGGTG
AGGGGTATTGATATACACAGCAGATTTGATCCCGCTTTCGCCTTCATTGA
ATTTGAAGATTCTCGCTGGGAACCTCTCTCAGTTACACAACCACATCCAT
CTCATTGATGTTGGGATAAGGATGCTGATGATGCAGTATATGGAGAAGAT
GGCAAAAGGTTTGACGGAAACAGAATAAAAGTTCAATTTCCAAGAGGAAC
TCCAAGAGATTCATCTGGCAGAGGAAGAGGTAGTTCCCGTGGAGGTCGAG
GTCCACCTGGAGGAAGCCGTGGAGGTCGGGGTGGTAGAGGTCCACCCTCT
AGAACTGATCATCGTATCATTGTATCTGGATTACCAAAATCAGGCAGTTG
GCAAGATTTAAAAGATCACATGCGAGAAGCTGGTGAAGTTGTTTATGCTG
ATGTTTATAAGGATGGCACTGCGGTCTGTGAATTCAAAAGTTCTAGCGAT
ATGAAATGGGCTCTCAAGAACTTAGACGACACAAAATTTAAATCACATGA
GATGTCATCACTTTCAAGAACCACAAATTCAGATTCAAGAATCTATGTTG
GTAATTTACCACAATTTGTGCGACAAAGAGACTTGGAGGATCATTTTGAT
CGATATGGTAAGGTGAGGGGTATTGATATACACAGCAGATTTGATCCCGC
TTTCGCCTTCATTGAATTTGAAGATTCTCGCTGGGAACCTCTCTCAGTTA
CACAACCACATCCATCTCATTGATGTTGGGATAAGGATGCTGATGATGCA
GTATATGGAGAAGATGGCAAAAGGTTTGACGGAAACAGAATAAAAGTTCA
ATTTCCAAGAGGAACTCCAAGAGATTCATCTGGCAGAGGAAGAGGTAGTT
CCCGTGGAGGTCGAGGTCCACCTGGAGGAAGCCGTGGAGGTCGGGGTGGT
AGAGGTCCACCCTCTAGAACTGATCATCGTATCATTGTATCTGGATTACC
AAAATCAGGCAGTTGGCAAGATTTAAAAGATCACATGCGAGAAGCTGGTG
AAGTTGTTTATGCTGATGTTTATAAGGATGGCACTGCGGTCTGTGAATTC
AAAAGTTCTAGCGATATGAAATGGGCTCTCAAGAACTTAGACGACACAAA
ATTTAAATCACATGAGATGTCATCACTTTCAAGAACCACAAATTCAGATT
CAAGAATCTATGTTGGTAATTTACCACAATTTGTGCGACAAAGAGACTTG
GAGGATCATTTTGATCGATATGGTAAGGTGAGGGGTATTGATATACACAG
CAGATTTGATCCCGCTTTCGCCTTCATTGAATTTGAAGATTCTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030861XLOC_030861Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048539-proteinTCONS_00048539-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048539-exon-scaffold_143-1575043694:89041..89236TCONS_00048539-exon-scaffold_143-1575043694:89041..89236Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1575043694:86430..86811TCONS_00048539-exon-scaffold_143-1575043694:86430..86811Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1575043694:85666..86128TCONS_00048539-exon-scaffold_143-1575043694:85666..86128Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1575043694:85339..85418TCONS_00048539-exon-scaffold_143-1575043694:85339..85418Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1575043694:84471..85009TCONS_00048539-exon-scaffold_143-1575043694:84471..85009Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1510915933:89041..89236TCONS_00048539-exon-scaffold_143-1510915933:89041..89236Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1510915933:86430..86811TCONS_00048539-exon-scaffold_143-1510915933:86430..86811Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1510915933:85666..86128TCONS_00048539-exon-scaffold_143-1510915933:85666..86128Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1510915933:85339..85418TCONS_00048539-exon-scaffold_143-1510915933:85339..85418Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1510915933:84471..85009TCONS_00048539-exon-scaffold_143-1510915933:84471..85009Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1491911889:89041..89236TCONS_00048539-exon-scaffold_143-1491911889:89041..89236Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1491911889:86430..86811TCONS_00048539-exon-scaffold_143-1491911889:86430..86811Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1491911889:85666..86128TCONS_00048539-exon-scaffold_143-1491911889:85666..86128Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1491911889:85339..85418TCONS_00048539-exon-scaffold_143-1491911889:85339..85418Clytia hemisphaericaexon
TCONS_00048539-exon-scaffold_143-1491911889:84471..85009TCONS_00048539-exon-scaffold_143-1491911889:84471..85009Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:84471..89236 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.76381	2.55999	2.2154	0.927523	2.45922	4.51765	7.40266	2.11386	3.73309	5.29367	1.34046	0.761358	0.893042	1.17885	1.35402	2.64577	2.937	1.51323	0.947136	0	0.382017	0.569061	5.36873	1.65947	5.82298	2.16275	2.30882	0.645753	1.66529	3.37547
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00048539 vs. Swiss-Prot (Human)
Match: SRSF1 (Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.568e-47
Identity = 96/180 (53.33%), Postives = 120/180 (66.67%), Query Frame = 3 
Query:   42 NSDSRIYVGNLPQFVRQRDLEDHFDRYGKVRGIDIHSR-FDPAFAFIEFEDSRDADDAVYGEDGKRFDGNRIKVQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRIIVSGLPKSGSWQDLKDHMREAGEVVYADVYKDGTAVCEFKSSSDMKWALKNLDDTKFKSHE 578
            N+D RIYVGNLP  +R +D+ED F +YG +R ID+ +R   P FAF+EFED RDA+DAVYG DG  +DG R++V+FPR       G G G   G      G    R          +R++VSGLP SGSWQDLKDHMREAG+V YADVY+DGT V EF    DM +A++ LD+TKF+SHE
Sbjct:   13 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE--------NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE 184
The following BLAST results are available for this feature:
BLAST of TCONS_00048539 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SRSF11.568e-4753.33Serine/arginine-rich splicing factor 1 OS=Homo sap... [more]
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