TCONS_00048679 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048679
Unique NameTCONS_00048679
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2705

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048679 ID=TCONS_00048679|Name=TCONS_00048679|organism=Clytia hemisphaerica|type=transcript|length=2705bp
GTTCAATCAAACGAAGTTTTCGAGAGGAAAAAACGTCAATAAGGAATAAA
AACAAGAACAGCAGTCGATGATTGATTATTATTGTTGTGTTACCTGCATG
GAGCGATTTGTAAAAGACAGTGCAGACTGGTGCCGAGGTCAACACCATTG
ACTAGTTCCTGAGAAAGCTCCGGACTGAAGAAATCAAGATAACCAGAAGA
AAGGAGAATCCCCATCGACGACGGAGGGatctgaagatttaaaaaatcta
accaTTCATACTTTATGGCCTAGTAATTTAGACGACGCTGATACAGACAA
GTTCAACCAAAAGCCATCCTTGGAAACAACCATTACGTTTTGGTTTGTGG
ATACAAGATATATCCTTTAACCCATTTACCACTAAGAGAACCTTCTCAAC
ACGTGACAGAACATTATGAAAATGCCAACTAACCGTTTGCTACCCAACTT
TGGCCATGCCTTGGTCGAATACAAGAACATGAGGTTCCTTATTATGGACC
GACCATCGAAAGCCAACATCGGACAATTTGTCGAGGAGCTGAAAAAATGC
GATGTATGCGCAGTGATTCGTGTATGCGAGCCAACCTACGATCCACAGCT
ACTGGTCAAAGAAGGAATCAATGTTTTCGACTGGAAATTCGATGACGGCG
CTGCCCCACCAAGAGACATAGTACAATCATGGCTCGATTTTTTAAAAGCA
ACATTCGTCGAAAATCCTGGTGCCACTATTGCTATCCATTGCGTGGCGGG
TTTAGGGCGAGCGCCAGTTCTCGTGGCACTGGCGCTCATCGAGGGTGGAA
TGAAATATGAGGACGCGGTCCAGTATATTCGTCAACGACGTCGTGGCGCC
ATTAATAACAAACAGTTAGAATACTTGGAAAAATATAAACCCTTGAAAAT
GTTTCGTGGAAAAGAAAAAGGTTGTTGTGTGCAGTGAGAAAAGACAAAGA
ATGCTTTGcaaattgacttttttttggtttattgattgaatgaatatttt
ggacaatttatttttatttatacatAATAATTAGTTGTAGTTATTCTTCG
TCTTACCCTGACCTGTCGAATAAATGTGTATGGTTTGAGACTACACTTCA
TAGGGCCCAGGCCAAGTCTGACCCCTCCATTTCAAGGAGCATTTGCCAAG
AAAGGCTGATTGGGAGTTTTCTTCTGTCTAATAATTTTCTCACGGATTAT
GAGAGTCTTCATCTGAATTTTCTCTTCGTCAGCATATTTTTTTGGTTACT
TTCTAGACTTAGACTTCATTTGACAGATTTTCGAAACAGCTTTTGAATGA
TGATAGACCATTACATAAACTTAATTTTCTGAGCATGTGAAGgtgtaaaa
catttttaaagtaaatttcatttcaatataTCATTCCTCATTTTGTATTG
CTAGGATGTTTATAATTTAGGTCAGTAAATATACAGCTAGTAGTATAAGA
AGCCTTTTCCAACTTTGAAATGTATCTAAATGCCTTAGTCTCCTTTTTTT
GTACGTAGATATAATTTAATTTCTGcgaaacaatttttaaaatgatttac
TAATAGTTTGTTATTTTTGCTTGTggggattttttcaaaatattttattt
agtatatACTGCAACAGTTTGAAAAgtttattaatatttttttgtaaagt
caaaaattttccctttttttccaagcagaattttcaaacgaaattttaaa
tgaaataataCGAATAAAAATGTGATAATAATGGTATAGCAACGTCTTGT
CTTCATTTGGTTTAACCCCTACTACCTGGAACAGAATTCTTAATAAGAAA
AATTCAGAAATTACAAATAAAGATGTAGATGAAGATCATCTAATTGGACT
GGGAATCATTTTGCCACTTAGGTTTAACTAAATATGCATAGAATACATTC
CCTAAAACTTAATCAAATATATCAAACTCAAGCCGTGATCACTTTTGATT
CTTAGTATCACCCAAAGTACGTACCACCAGCACAATGTTTATTATTGAGC
GGTGATGAAGGCCCACTCACATTGTATACATTTGTTGATAGTTTATCGTA
TCTGACTTTCATAGCTCTTTGTTTATCACTCATCAATCGAGAAGTCGTTT
TCATTTGAGAATTATAaaacttcaattctttttctaattttcgatccaaa
agtttatttttactCAAAACAAATTCGCAATATTCACTACACTTTGGTTT
GTATACTAATTCCCGTTTCGTAGGTGGTGGTTTTGATTCTTggatctttt
caattttttcacgtTTCATCTTATAGGTGCCATCTTTTCGTTTATGAACG
CGCCCCATCAGTGGGCTGTGAGGAGGTGCCATTTCTGTCATATTTTGTAA
GAATCCGAAATCATGCTCACCTTCTCTTAACATTTCTTGGTAATCCACTT
GACTAGAGTCCAGACCTTTCACCATTACTGATATTGTAATTTCTTTTCGT
GCTGAATTCTAAACAGGTTCCTTTTATACTGCCAGCAAACCAAAGATTGA
AGAAATTCTGTAGGTCATCTAAACTTTATTCAAAACAACGCGTGTGGATT
CTCTTTGATTATGAGTTTCCGAACTTTTTGCTCCCGTCGTTAATTCCAAT
CTGTTTCATGTACAATTGGAAACTTACGGCTCCAACAACCAGCAAGATAT
CAAAAATGattctcttctttttcttattaatttcttttttttttcaactg
aaaat
Run BLAST on NCBI

transcript from alignment at scaffold_145:230780..237492-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048679 ID=TCONS_00048679|Name=TCONS_00048679|organism=Clytia hemisphaerica|type=transcript|length=6713bp|location=Sequence derived from alignment at scaffold_145:230780..237492- (Clytia hemisphaerica)
GTTCAATCAAACGAAGTTTTCGAGAGGAAAAAACGTCAATAAGGAATAAA
AACAAGAACAGCAGTCGATGATTGTAAATTAACCTTATTTACTATGTCAA
ACATCTAATCTAGGGTTGTTTTTGAAAAGTCTTTTTAGTTATCAGACACT
TGATTGTCTTTTGTAATATTGTATTACTATTTTGGTTTATTTAGACTTTC
TCTTTCGTCTTCCCCTTTATATAATGAGATGAGGTTCCAATCAATCCTAC
TTTTTTCTAGTTAGTCATGTAGTAAGTCTCCATCATAAAATATCTGACGC
AAAACTGTATGAAAAGATATGTTTTTAAGAAAGTTTAAAAAAATCAGCAG
ATTATTATAGTTTATCAGTTTCTTATGTATAGTATGTAAGTATGTCATTT
TAAAGTAACTTTAGAACGTCGTTTTTTGCTACAGAATTCTACATAATAAA
AGTTAGACTTTGTCCGTAAATTATAAAACAGCTTTTAAACAGCCCATGAT
TATTTTTTGATTGTGAAAGTTTTGTAGTATCTTTTACATTTCACCATTTT
TCCATCTTAGTCTGTCTGTCTTTTTTGACATGATAAGCAACCAAAGTCCG
AAATATAAAACNGCTAAAACTTTGGGGCTGCCTGGAGACTTCAAAAATTG
TTCGATTTGGCTGAAATTTTGCACACAATATCTGGGGTTCTACAATTGGG
CCTATGAATAGTTTGAAGACACTGAAGTTGAGCCCAGTGCGTTGCGCACG
TTCGATTTTGTAGTATCTTTTACATTTCACCATTTTTCCATCTTAGTCTG
TCTGTCTTTTTTGACATGATAAGCAACCAAAGTCCGAAAAATAAAAAATT
ATACAGATTTTTTTAACTGTCCTTTACTTTCGTTTTTCTTTATAGGATTA
TTATTGTTGTGTTACCTGCATGGAGCGATTTGTAAAAGACAGTGCAGACT
GGTGCCGAGGTCAACACCATTGACTAGTTCCTGAGAAAGCTCCGGACTGA
AGAAATCAAGATAACCAGAAGAAAGGAGAATCCCCATCGACGACGGAGGG
ATCTGAAGATTTAAAAAATCTAACCATTCATACTTTATGGCCTAGTAATT
TAGACGACGCTGATACAGACAAGTTCAACCAAAAGCCATCCTTGGAAACA
ACCATTACGTTTTGGTTTGTGGATACAAGATATATCCTTTAACCCATTTA
CCACTAAGAGAACCTTCTCAACACGTGACAGAACATTATGAAAATGCCAA
CTAACCGTTTGCTACCCAACTTTGGCCATGCCTTGGTCGAATACAAGAAC
ATGAGGTTCCTTATTATGGACCGACCATCGAAAGCCAACATCGGACAATT
TGTCGAGGTAAATTAATCTTATTATTATCACTGCCTTATTTTAATTACAA
ACATTCGAAGCATTTTATCGAATACTCTCACGAAGGCAACTAGCTGGACT
TGCAACCATGGCAAGTAAGAAAAGGAAAAATTGTGATATTTTTTGTTATT
ATATTGTGTAAGAAAAACCACACCGCAAAACCCTTCGCAATAAAAATAGC
AAAAACTTTTGACATTATTTGAATTTCTCTATTATTGCCAGAAAATAGCA
TTTTTCAGATGCTCTTTTTGAACCACTCGAGGAAGTTACATATAACCACA
AAATTACTTGCGATTTTTATGTATCTGTCTTCCCTTCTTAAAACTGATAA
GAGCCATGAAATCAGATTTTACTCAGCTTACAATTATTTTGTAGAACTTT
GATCCTCAAATACCTACATAATTTCTACCTGTTGTGGTCTTTATACATTA
TTTACGTATAATTTGTTTTGTATTTCGACAGGAGCTGAAAAAATGCGATG
TATGCGCAGTGATTCGTGTATGCGAGCCAACCTACGATCCACAGCTACTG
GTCAAAGAAGGAATCAATGTTTTCGTAAGTAATTTTTCAATTGTTTTTCC
TAAAAAAAATTCGTATCTGCCATTCCCTCTTTTTTTGTTTGTTTGTCCTT
ACATTTTCATTCATTTTTGCGTGAAGATGAGGAGTTTGAAATTTGAATTA
ATGATGATGAACGAATTATACCTATTTCCTGTTGAAAAGCCAAAAAGGTT
TTACCAGTTCCTCTTACCGTTATTTTTGGAATTTATTCGAGGTCATTTCA
GAAGCATGGTGATACATCGAGTCAGAAATTTTTCTTTTAATTTTCCCATC
AAAAAAGGAGATGATTTAACAATTATGAAGCATAAGGAGTTTCTAGTATA
AATTATAAAGGTTATTTACTCCAATTCGAATGAAACAAATGCAACAGCAT
TCTTAATTACGAATCAAATGAAGTATTTGATTTTTTTATCTATTTCTAAT
TGGCCTACGATCTCCCCTTTTCATATGAAAATGATATCATCAAAGAAAAG
ATAGTCATACTTTTTTATCCGTCCGTTATTTGCTCGAATTGATTAAATCG
TCATGTCATCGTCATGTTGATGGATTTTCATGTTAATAACACATTTAAAT
ACCTGCCAAACAGGTTTTTTTTAACTTTTTTTTTGATAGAATACCAACAG
TTACATGGCCCAAACTTGCCAAATTTGTTAATTTTTTCTCAAATAATAGT
GAGCCTCAAAAATTGTTAGAATTTTTTAATATTATAAGGGGGCCCTTATA
AGGCTCAAAATTGAAAATTTTAAAGAATCATGAGACTCGTCTCTCTATTT
ATGTAATTCTTATAAAAAATTGTGTGTCGTGCATCGATTTTAAATTAATT
TTAATTGAATACACTTTAGTAAATGGAAATAGAGGGTATAGGTATATGGT
ATATGGTATAGAGGGCACTCACTCACTCCGATGTTTTTCAAATACCTACT
ATTCAGGTCATGATAGATATCCCAAACCAGGGAAGCAAAAAAAAACACGG
TACTAGAAATAGTCTTGCTATTTGCTTAGTTAGTCATGTCACGACCAACA
GAACAAACACGAATCAATTTTTTTTCTTTTTACTTAATCCAATTATAATC
CGTTTTTCCTTGTGTAAAAAAGCAGATAACTATCTGCTGCCTTTGTTTGC
GTGTTGTGTGATAGGGGAACGAACTATTTTATCCTGAACTTGAAAGTGAT
GATATCCATTAGCCCTAATTCTGAGCTCTCTTGAGAAGTATACAGATGTT
TAATGATCGACTTTTATTATCCAATCAACAATCAACTTTTCCTAAAATGC
CAGGCAAAATTTGAATTTATTGGATTAAATAAAACGGCATTTTAATGAAG
GTGTTCTTAGTCTTTTTTTGTATGTTTAGTATGATCATATCAAAATGTCA
AAAGTCTCGTTAAAGAGCTCTCTCCTAAATTAAACCCCGGAAATTTGTTT
TTCGTGACATGCGATGGACAAATATTGAGCTTCTATTTTGGACATAGAAG
TGTCCAAAGAATTCGATTGATTTGCCAGTCTAAACAAACAAAATTCCACA
AATATCTAGCCACAGGATATCATGAAATTCACTTTGTGCGAATCGAATTA
GTCCAGCAAGCTAGACGAAAAAAATAGATAGACGACTTATTCAGACATAG
TAGAAATAAAGCAAAAAGTGATGGAGGGAACGATTTTAGTTTATACAAAC
TAAATCCCGTTACAATTATCGTATTATCATATAATACTACTGTATTACAT
GCATTATAAACGACTCCAGTCTAGAATCGAATCAATCAAATGAACACATC
ATAATACAAACATCGAGAGTTAAAAATGACCAAAGAAGAATCTTTCATTT
CATTTGCTTAAATGCTTATTTCCCATCTAAAGTGTGTTAATGGTGTATTT
GCCAGATTGAAAGTAAAATTTGTCTTCAGATTTATGATCCTTATCTGGGG
GGATTATCATCTTCTTCAATACGCGTTTTTATAAGAACAGCCAAAATTTT
CGAAGCCTTCGGATGTTCTTTTTTTTAATTTTAAGCCTTAAAAATATTTG
GAAGTTGTTCATAATTTCACTATTTTGTGGGTATTTTTGTGCAAAGTCCT
AAATTGTGATTTTTAGAGGCCAAAAAAGCCTTAAAGGTTTTATTTCTACA
TAAGTGTTCTGGTTTCATATCAGACACAAATTTCATATCATGGCATTGTC
TGCTTTTTGTTATTATGCTGATATAAGCAAAAAATGATGAGTAAGCAAAC
GATATCACTCTTATTTAAAAACAAAACCTTTAACTTGTTCATAATATTTT
GGCTAGTCTCGAACTTAATTTTCTTATATAGTTTGTTTCCTTGTCTTTCA
CAGGACTGGAAATTCGATGACGGCGCTGCCCCACCAAGAGACATAGTACA
ATCATGGCTCGATTTTTTAAAAGCAACATTCGTCGAAAATCCTGGTGCCA
CTATTGCTATCCATTGCGTGGCGGGTTTAGGGCGAGCGCCAGTTCTCGTG
GCACTGGCGCTCATCGAGGGTGGAATGAAATATGAGGACGCGGTCCAGTA
TATTCGTCAACGACGTCGTGGCGCCATTAATAACAAACAGTTAGAATACT
TGGAAAAATATAAACCCTTGAAAATGTTTCGTGGAAAAGAAAAAGGTTGT
TGTGTGCAGTGAGAAAAGACAAAGGTAACCCTTCAATTTTTTTTTTAACA
ATCTCCTCCCTTTTTTATAGATAATCTCTATATAATTGACTAGAAAAGTT
TTTATTTTTAACAAAGTAATTATTTTATCATGTGTCTAGAAATTCACCCT
CAGCAATAATTAATCGACTGCGAAGCCTTTTTCATCAAAGAATATAATTT
GCTTTTTCTTTTAAAACTTGAATTGACAAGCAAACGAGTAGATTGACCTA
TTTCGCACATTGCTGCAGGTTTTGGATTTTTTGAGAAAAAAAAAGAGAAA
AAACGATAAAAATTTTTGGACCCTACTGACTTGCTTACTTATTTTCTCGT
TAATTTTTATCAAATAATTTACTGGTGTTTATGTATGCTGACATATTTTA
ATTTTAGAATGCTTTGCAAATTGACTTTTTTTTGGTTTATTGATTGAATG
AATATTTTGGACAATTTATTTTTATTTATACATAATAATTAGTTGTAGTT
ATTCTTCGTCTTACCCTGACCTGTCGAATAAATGTGTATGGTTTGAGACT
ACACTTCATAGGGCCCAGGCCAAGTCTGACCCCTCCATTTCAAGGAGCAT
TTGCCAAGAAAGGCTGATTGGGAGTTTTCTTCTGTCTAATAATTTTCTCA
CGGATTATGAGAGTCTTCATCTGAATTTTCTCTTCGTCAGCATATTTTTT
TGGTTACTTTCTAGACTTAGACTTCATTTGACAGATTTTCGAAACAGCTT
TTGAATGATGATAGACCATTACATAAACTTAATTTTCTGAGCATGTGAAG
GTGTAAAACATTTTTAAAGTAAATTTCATTTCAATATATCATTCCTCATT
TTGTATTGCTAGGATGTTTATAATTTAGGTCAGTAAATATACAGCTAGTA
GTATAAGAAGCCTTTTCCAACTTTGAAATGTATCTAAATGCCTTAGTCTC
CTTTTTTTGTACGTAGATATAATTTAATTTCTGCGAAACAATTTTTAAAA
TGATTTACTAATAGTTTGTTATTTTTGCTTGTGGGGATTTTTTCAAAATA
TTTTATTTAGTATATACTGCAACAGTTTGAAAAGTTTATTAATATTTTTT
TGTAAAGTCAAAAATTTTCCCTTTTTTTCCAAGCAGAATTTTCAAACGAA
ATTTTAAATGAAATAATACGAATAAAAATGTGATAATAATGGTATAGCAA
CGTCTTGTCTTCATTTGGTTTAACCCCTACTACCTGGAACAGAATTCTTA
ATAAGAAAAATTCAGAAATTACAAATAAAGATGTAGATGAAGATCATCTA
ATTGGACTGGGAATCATTTTGCCACTTAGGTTTAACTAAATATGCATAGA
ATACATTCCCTAAAACTTAATCAAATATATCAAACTCAAGCCGTGATCAC
TTTTGATTCTTAGTATCACCCAAAGTACGTACCACCAGCACAATGTTTAT
TATTGAGCGGTGATGAAGGCCCACTCACATTGTATACATTTGTTGATAGT
TTATCGTATCTGACTTTCATAGCTCTTTGTTTATCACTCATCAATCGAGA
AGTCGTTTTCATTTGAGAATTATAAAACTTCAATTCTTTTTCTAATTTTC
GATCCAAAAGTTTATTTTTACTCAAAACAAATTCGCAATATTCACTACAC
TTTGGTTTGTATACTAATTCCCGTTTCGTAGGTGGTGGTTTTGATTCTTG
GATCTTTTCAATTTTTTCACGTTTCATCTTATAGGTGCCATCTTTTCGTT
TATGAACGCGCCCCATCAGTGGGCTGTGAGGAGGTGCCATTTCTGTCATA
TTTTGTAAGAATCCGAAATCATGCTCACCTTCTCTTAACATTTCTTGGTA
ATCCACTTGACTAGAGTCCAGACCTTTCACCATTACTGATATTGTAATTT
CTTTTCGTGCTGAATTCTAAACAGGTTCCTTTTATACTGCCAGCAAACCA
AAGATTGAAGAAATTCTGTAGGTCATCTAAACTTTATTCAAAACAACGCG
TGTGGATTCTCTTTGATTATGAGTTTCCGAACTTTTTGCTCCCGTCGTTA
ATTCCAATCTGTTTCATGTACAATTGGAAACTTACGGCTCCAACAACCAG
CAAGATATCAAAAATGATTCTCTTCTTTTTCTTATTAATTTCTTTTTTTT
TTCAACTGAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030929XLOC_030929Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048679-exon-scaffold_145-1575043694:237420..237492TCONS_00048679-exon-scaffold_145-1575043694:237420..237492Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1575043694:236136..236597TCONS_00048679-exon-scaffold_145-1575043694:236136..236597Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1575043694:235569..235661TCONS_00048679-exon-scaffold_145-1575043694:235569..235661Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1575043694:232919..233239TCONS_00048679-exon-scaffold_145-1575043694:232919..233239Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1575043694:230780..232535TCONS_00048679-exon-scaffold_145-1575043694:230780..232535Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1510915933:237420..237492TCONS_00048679-exon-scaffold_145-1510915933:237420..237492Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1510915933:236136..236597TCONS_00048679-exon-scaffold_145-1510915933:236136..236597Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1510915933:235569..235661TCONS_00048679-exon-scaffold_145-1510915933:235569..235661Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1510915933:232919..233239TCONS_00048679-exon-scaffold_145-1510915933:232919..233239Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1510915933:230780..232535TCONS_00048679-exon-scaffold_145-1510915933:230780..232535Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1491911889:237420..237492TCONS_00048679-exon-scaffold_145-1491911889:237420..237492Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1491911889:236136..236597TCONS_00048679-exon-scaffold_145-1491911889:236136..236597Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1491911889:235569..235661TCONS_00048679-exon-scaffold_145-1491911889:235569..235661Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1491911889:232919..233239TCONS_00048679-exon-scaffold_145-1491911889:232919..233239Clytia hemisphaericaexon
TCONS_00048679-exon-scaffold_145-1491911889:230780..232535TCONS_00048679-exon-scaffold_145-1491911889:230780..232535Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:230780..237492 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0617606	0.124532	0.152308	0.081708	0	9.3041e-05	0.15438	0	3.2439	1.78575	1.30335	1.40149	3.27231	4.26159	2.62598	2.05623	8.43978	5.27304	0.240557	1.59941	0.107537	0	0.0141365	0.0727772	3.47913	0.951658	1.30933	0.162404	0.0592697	1.21868e-08
Blast
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BLAST of TCONS_00048679 vs. Swiss-Prot (Human)
Match: TP4A1 (Protein tyrosine phosphatase type IVA 1 OS=Homo sapiens GN=PTP4A1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 2.504e-62
Identity = 101/162 (62.35%), Postives = 116/162 (71.60%), Query Frame = 2 
Query:  464 VEYKNMRFLIMDRPSKANIGQFVEELKKCDVCAVIRVCEPTYDPQLLVKEGINVFDWKFDDGAAPPRDIVQSWLDFLKATFVENPGATIAIHCVAGLGRAPVLVALALIEGGMKYEDAVQYIRQRRRGAINNKQLEYLEKYKPLKMFR-----GKEKGCCVQ 934
            V YKNMRFLI   P+ A + +F+EELKK  V  ++RVCE TYD  L+ KEGI+V DW FDDGA P   IV  WL  +K  F E PG  IA+HCVAGLGRAPVLVALALIEGGMKYEDAVQ+IRQ+RRGA N+KQL YLEKY+P    R     G    CC+Q
Sbjct:   12 VTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173
The following BLAST results are available for this feature:
BLAST of TCONS_00048679 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TP4A12.504e-6262.35Protein tyrosine phosphatase type IVA 1 OS=Homo sa... [more]
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