TCONS_00048735 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048735
Unique NameTCONS_00048735
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048735 ID=TCONS_00048735|Name=TCONS_00048735|organism=Clytia hemisphaerica|type=transcript|length=3146bp
CAAGAACATTCAGCAATATGTCAAGCCCAAAATACACAACGCGGATGTCA
ATCAGAGAGCTTGATACACCAAAGCATAAAAAGACAAGAGATCGCTTCTT
GTTGGCATGGAAACTATTCAAAGAGAGAGATGACACGTGCAAGAAATCGT
TCCACAGTATTGCTGAATATCATGGTATGCCCTTTGACAAAGGAGACGTC
GGTCCTGAAGGTTGGGGTGGTTATTGCCAGCACGGTAACGTCCTATTCCC
AGTATGGCATCGATATTACTGCCACGAACTTGAACAAGGTTTGAAAGATG
CCATGCTTGAATACATGAAGAAATGTAAAGGAACTGAAAATGCAAGTGAA
GAGGATGTTTGTGACATTGCTCTTCATTATTGGGATGAGAGCGTTCCCAT
TGATAAAGATGACACGGAAgatcaaaaaatcgaaaaacttgTTCCTAAAT
TGCTTACTAATGAGAAGGTTACCATTACATATCCGGGGACCGACGGTCAA
GAAGTAACTGAGCAGATTATGAATCCTTTGACACATTTCGAGGTGAAAGC
AGGAATTTCCGGAAATGCTGACAGCTGGTATTTGAAGCCAAAGAATTACC
AGACTGTTCGATTCCCATTTTCAGGAATTAAGAACCCACCAAACCAGAAA
GATATTGCGGACGATCACAATGATAGTATTAGCGACCTCGACCACACGGA
GACACTCCAGAAAAACCTTGTTCATACTATTGCTGATGTAGGACGTCATG
AAGCTGATGATACGGTTatacaacttttcaaaaattgcttGGATGACGAT
GCACAAATGTACAACAAGTTTTCAAACACAAATTCAAACCCTCATAATTC
TATGGAACAACCTCATAATGATGTTCATGTTGCGTGTGGTGGTTACACTA
AATTCAAGATCGATAAAAATGGCCATTTGGATTATGCCGATAAAAGTGGT
ATTTTGGACGGAGCTAACGGTGACATGGGAGCTAACGAGGTCGCATCTTT
TGATCCCATCTTCTTTCTACATCATGCAAACATTGATCGGATGTTTTGGG
TGTGGCAAAAGAAATGGCATAAAACTGGACGAGAAGGGGATGAGAAGTTT
ATAATCACTAATGACGATAAAGGTTCAAAAGTGAATGGAGGCAAAAGCGG
CGGACAAGGACCAACTCCCGGACAGAACATGGGAGATGATTTGACAATGG
ACAGCGAATTGAGACCGTTCAAAGCTAAAGGTATGCttcccagctagcac
acaaagttgtttcaacgtttatttaacgttcacaacgttcaggtaacgtt
agatgaacgttgaaacaatatttgtgtgccagctgggttaaaAGTCGTGA
AAATATTGGAAAGTTATAAGGCCCCTTATAACATAACCAACGCAATATTa
ctaaatatgaaaaattcgaaaagaaaattggaaaaacgaagatgaaaaat
gaagaagaaaaaaacaacttcTGGAAAAAGTGTACTTTTAATCGTTTTCT
TAATCTTAGAACATTATCACTATGAAAAAActtattcaaaaatattattt
taatcaaaagatatgGCCAAAAGTTCGTCACTGTTTGACTTtaaaaagca
taaaaaataacaaagagaAGCCCATAGGCAACCAAAGAGAAGTTTAAAGA
TGCAGTTCTTGactgaataattattttttgatttttttctccatttcttA
TAATATGAAAATGACGATAATGGCAAAATTCTACTCGAAGTTGatttgtt
tcttcttcatttttcatcttcgttttccAAACTATTTATATTTCTTTCTA
TTTTATGATATTCGACTcctaattatcttttcaacgagcgcAGAAAACCG
CTTAGGTTTCCTAATGTATTACGGGAGGTTTCCAAATGCATTATGGAAGT
TTTACCAATGCATTATGGGAGGTTTCTTAATGTATTATGGGAGGTTTCTT
AATGTATTATGGGAGGTTTCCTAATGAATTATGGGAGCTTTCCAAATGCA
TTATGGAAGGTTTCTTAATGCATTATGGGAGCTTTTCCAATGTATTATGG
AAGCTTTCCCAATGCATTATGGGAGCTTTCCCAATGCATTATGATGCACA
ATGAGGTTATGACTATGTTCTATTTGTAGTATTTATTATCCTTGGTGAAT
TTATTTAATCTTTTCTCTCAAATAGAAAATTTCCAAACTGCAAACGGTTG
TGTAGACATAGAGGGCCAACTTGGTTATACTTATACAATTGGATCATTGG
ACCAAGAATATTGGCCAAGATTACCCAAACGGAAATATGAAGATATTGGT
GAACCGGAAAGCAACGTACCAGCCGCCCCGGGACTGCCCACCGTTCGAAA
GACAACTGGTGAACATTTGAAGTCCAAGATGAAATCTTTGaaagagaaaa
tcaaaaagaaaaagtcaggCCCGTCGGCCGCCCCTAAACCTAGTACGGGT
GGGGGCGGAACACCCATAGAAATTATGTATGAGATGAACCACAAGATTAC
TTCTTTGGgaaaagaaagtgaagaaaaacagGAAGGATGGCCTGAAGAAT
TCAAGATGGTTAATGACAGCTTTGAAATAGACGGCACTAATTTCAAACGT
GAATTTTATACCAAAGTGGAAGGGATTGACATGAATCAGTTTTATGGGTC
GTTTATCGTTATCACTGGAAGAAGGATTTATGACGAGCAATCCAATAAGT
ACGTGTGGACAATTATTCATCAGAAAGCTGTTCTCGCAAGaTGGGACAAA
AGCGCATGCAAAAATTGTCAGAATCACAGCTCTGTTGATCTGTGCTTTTC
AATGGGAAAAGTTCTTCCAGgagatttattgaaaaataattggaATGTTT
GGTTCGTCTTTCGCAGAATGGATAATCACAGATTTGCTATTTTTCCTGTT
GTCCCTTACTCAGATGGTAATGGAGAAAGAGTCCCAGAGAATTCGTATCG
CGAGATCAATCACTTTGTCAGAATTTGTGAAATGCCCAGTAAGAATTGAA
CTGAGGTGTCCAGTATAAATTAAACTGTGAGGTGCCAATTATAAATTGCA
TTTTGAGGTGCCCATTATTGAATTAAACTGAGGTGCCCAGTATGAATTAA
ATTGTGAGGTGCCCAATATGAATTAAATTATGAAGTGCCCAGTATG
Run BLAST on NCBI

transcript from alignment at scaffold_146:267508..279189+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048735 ID=TCONS_00048735|Name=TCONS_00048735|organism=Clytia hemisphaerica|type=transcript|length=11682bp|location=Sequence derived from alignment at scaffold_146:267508..279189+ (Clytia hemisphaerica)
CAAGAACATTCAGCAATATGTCAAGGTAATATGGATATTTCTCATTCATT
ATTGcaatctacacgcttttttcataagaacaaactatataagaacatta
ggctttgatggccaaaatgttaagaacaaattaagaacattttaaggctt
tatgaactcgaaacacccgatttcttgggaaaatgggtaaaaatagtcaa
aaaatgttgaaaataataacatgttaagaacttttttaggcttaaaactc
aaaaagttaagaaaatcccaaggcttcaaaaattttgaatgttcttataa
aaacgtgtagtttaTAATTTCATATTACGGGATCAGCTCGGtcagccagg
gggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcggccggg
gggggggggtacttaaaTTAATTGAGGATACGAGTATGTGTCCCCTTtga
gggtacctttttggacttggacttgggtttgaaaaatcagaaaatcaaat
tttagacCCACTAGAGACCAGAAAACCGATTAGTCTCTACTAAGGGTCTC
AAActtgacaaaaagtttttttctcctttttagtctcgCTAAGAGACTAA
AAAGGAGGTCAGGTTCAAGAAGGTCAGAATTTGGGCGGCACACACCTAAC
ATCCCTCGGTGGACCAGCTACCGTGAAGTAACTTGCATCAGCGGAGGGAA
ACTttcatagccatcaaatgactgaccaaaaAAAAGCAGCAAAGtgtcaa
aacaaatgaactacgcagtaccactcgcagctctactctaccgttttgtt
ttgattcaactttgtattttaaggaccagccaggtcattcatttgacggg
catgcatgttagcctccactgatgcaagttaccgatctcacggtagttta
TAAGAAAATAGGCTAGTAAGAAATTATCTTCGGAAcctttttttatatac
attttacacccctgtctcaatcgCCCGGCAGAGCTTTCACTAGTCACAGT
GGAAATCAAAACTTATACacgatttttttaataagaatacactttataag
aatgtccatgatgaaaatggccaaaaaattaagaataatgctaaaaatat
caccatcatggaattttgctactcaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCAAAGCCATTGTCTGACTCTCAAGTTA
GAAACTTTGCGTGTCGGTTTGAAACTTTGATTAATAAAGAAGTTTGTGCA
CTGGAAATAAGGTTGACGTAATTTCTTTCGATTTTTTGTTAGCCCAAAAT
ACACAACGCGGATGTCAATCAGAGAGCTTGATACACCAAAGCATAAAAAG
ACAAGAGATCGCTTCTTGTTGGCATGGAAACTATTCAAAGAGAGAGATGA
CACGTGCAAGAAATCGTTCCACAGTATTGCTGAATATCATGGTATGCCCT
TTGACAAAGGAGACGTCGGTCCTGAAGGTTGGGGTGGTTATTGCCAGCAC
GGTAACGTCCTATTCCCAGTATGGCATCGATATTACTGCCACGGTAAGAA
AATTCCCTTTTATCTAATCGCTGgaaaatacacctttttccgGTTNTTAA
TCTATGACATAATCTTTAATTCATAAGGCTTTGGAGGGTGTATTAAGAAA
TGTTAAGACTGACTCGAAGAGTGATCTAAGCTACATTAGTGGATTTAAAG
CTTTAAACCCGAGTTATAACCCTGCCAATGTACTGAAACTTAAAGCCATA
ACTCCTAACCACTTACTTTAAAAGGGCATAAACAGTATGCTTTCAGAAAG
ACTATAAAAATACTTTTCCAAAGCCATTGTCTGACTCTCAAGTTAGAAAC
TTTGCGTGTCGGTTTGAAACTTTGATTAATAAAGAAGTTTGTGCACTGGA
AATAAGGTTGACGTAATTTCTTTCGATTTTTTGTTAGCCCAAAATACACA
ACGCGGATGTCAATCAGAGAGCTTGATACACCAAAGCATAAAAAGACAAG
AGATCGCTTCTTGTTGGCATGGAAACTATTCAAAGAGAGAGATGACACGT
GCAAGAAATCGTTCCACAGTATTGCTGAATATCATGGTATGCCCTTTGAC
AAAGGAGACGTCGGTCCTGAAGGTTGGGGTGGTTATTGCCAGCACGGTAA
CGTCCTATTCCCAGTATGGCATCGATATTACTGCCACGgtaagaaaattc
ttttttatctaATCGCTGgaaaatacacctttttccgGTCAGCCGTTTCG
Tataaaaattcaccaaaatttcgagtaagcaaaccatctcattggctaaa
agcaaaaacatcaacaaaaaaaaatgtccaGAGTAAGAGCACAAAAAGCA
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNaaattcaccggggtgttttgaaaccacaatcg
atttgtaagtgctctaaagtaggttggaagggtagagttttaactctgag
ttttaacaagAGACTTAAGActtctgaggatccaaaagttcaaaaatgat
cCAGTAgcgcttgaaatatagcctagaaaccaataaatccctcccagatc
gaaataatcgataaaatcaagttgagggcctgaagttgacattctcgctc
gaacttcaattttcgaaaaatggtaaattagccaaaagtgcaaatatatt
atggcacggattccATTTTTTAGAACTTGAACAAGGTTTGAAAGATGCCA
TGCTTGAATACATGAAGAAATGTAAAGGAACTGAAAATGCAAGTGAAGAG
GATGTTTGTGACATTGCTCTTCATTATTGGGATGAGAGCGTTCCCATTGA
TAAAGATGACACGGAAgatcaaaaaatcgaaaaacttgTTCCTAAATTGC
TTACTAATGAGAAGGTAaaagctttttataagaatatttaaaaattttga
agtgatcggatgttcttaactaaaAATGctctaacatgttcttattttca
tctttttgtgaatatttttgtccgttttcctaagaaaatagattttttaa
gGTCAGCGaagtcttgaaatgttcttaacttgttcttgatattttggcca
tcgaagccttatgttcttatataaaaaaacgtgtggtCAGAGTTTCAGGC
GTGATGTAGCCAGAGTGGCAGGTGTGTcaacttttttgtttcgattcttt
ttttaatttttaaattgtctgcgaaaaatttattataatttgTTCAgaag
ttgccataaagccattatggtaataaccgggagggcacattgctatacat
tgtaatttgttatattatatataactatttgaaatttttctgagaaattt
tCTAATTGATGTGTATTGAAAGTTATGACTCTTTGAGGCCTTTGAGTACG
AAAAattggaatgaaaaattaatcaaaaatcactattttcataattttta
ggagggagaagcttttacaaaattttcaaaaagatttttttttattcggC
AAAAGATATTCCATGTAGTGCAGTTTAtttctcaaaatgttttttcttcg
ctgaAAATAAGAATTCGAAGACcgaaattttggatattcttataatataa
aaaacgtgtatttaaaaCGCAAAACTTTGAATGTTTTTAGGTTACCATTA
CATATCCGGGGACCGACGGTCAAGAAGTAACTGAGCAGATTATGAATCCT
TTGACACATTTCGAGGTGAAAGCAGGAATTTCCGGAAATGCTGACAGCTG
GTATTTGAAGCCAAAGAATTACCAGACTGTTCGATTCCCATTTTCAGGTT
CGTGAATATCTAGGCGGGAGTTGGCGGAAGGGGCGTCGGAAAGGGGATAG
GCTAGAGGATATTCGTTAATATCctagattgattgattgataaaatCGAT
ATTTTATGTGGAtaacccagtaatctaggacttataggcaatgttttttt
atgattGCAATTTCTATGTCTCtaacggggtccacggccagctgACTTGG
CTAATTTATGAAAGAGGAGCGATACGAACTACGAACCCCTGGAGACGCTT
ACGTCTTTTACCGCTTGTTCATCGCTCCTTTTCTCCTTTNATGAAAGAGG
AGCGATACGAACTACGAACCCCTGGAGACGCTTACGTCTTTTACCGCTTG
TTCATTGCTCCTTTTCTCCTTTACAAGGTTTTGCCAGATGACAGGTGGGC
GTTGCCCGGCTTTCGAAAATCGGAAATTTTTGGTTCAAAAGTTGAGGAAA
GAACTCAAACATTTGGTAAATTTCGGACCTTTTTCCCCGAAGGACGGAAA
TCGGGatttttttgtaatatttcctttcaaaaaaagaatgaaaaagatca
aagatGCTAGGTGTAACTTTGTCCGGGGTTTATGAATGTCAATGGTCTGA
AagcgttttgttttttttcaattgtttcTAATTTGAGCTTTGAGAAGTTA
ATTTATTTATTGCCAACTTTTTCATCCGAGGAGTATTTGGTAACCTGAtt
aaaaactgagcaaatcgatctTTATCTCTtttcatgaaaagaaaaaacCT
GACCAAATGTTAAAGTAAAACGCTTCCTGACCAGGGTTTTTTTCTATAGA
CTGTatgtttattttgataaaagtttaaatATGTTAGTCTACATAATATA
TAGCTCCAGGCTTGTAGGTCTTTCTTTtagtctataggcactgctatagg
ggGCCCCTAATGGCCCCCACCAGGAATTTGCTTTTTGATAGGATTAAaca
taatataatttttaacaAACGAAATTTATCAATGACGTAGCCTAAAATAT
GTTTTCCTTCATAGAATATTTGTTTTATCACTTTGTCATATGTGGTgaga
ccactgacctttatataccctggacaaagcttctcaatcccagccaagca
aaatctttgatcggagttttttgaaaattggtaccctaatgtcggcacta
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNgatgtagcggcgttagacgttaat
ttttaacattgcaatggcttctccttgggtaccaattctaaaaaaactcc
aatcaaagatggcaggtattgtttggtccagggttatataaaggtcagtg
ggtgaGACGGGAGGGGGGTTACGATAACAGGGGAAAAAATGTCTGTACAA
ATCCTTCATTCAATAGTAAGTAAGTAGGTAGATTCATCTAATGGCTGTCG
GCGGAACCGGGCGAGGGAGTCAGTCCCCTTTTCTATTCACGCTAAAACta
gggagatcgaatgctgaggaaGGCGGCATATCTACTCTCAGTTGGctgtg
accggggatcgaacccacaacccttagattgtaaggcgaatgctctaccg
actgagctacccgacCATGAATACTTTAGAAGGAGAAGATTGTTGAACTC
ACCAATAAAACCTTTCTCTTGCAGGAATTAAGAACCCACCAAACCAGAAA
GATATTGCGGACGATCACAATGATAGTATTAGCGACCTCGACCACACGGA
GACACTCCAGAAAAACCTTGTTCATACTATTGCTGATGTAGGACGTCATG
AAGCTGATGATACGGTTatacaacttttcaaaaattgcttGGATGACGAT
GCACAAATGTACAACAAGTTTTCAAACACAAATTCAAACCCTCATAATTC
TATGGAACAACCTCATAATGATGTTCATGTTGCGTGTGGTGGTTACACTA
AATTCAAGATCGGCAAGTCATTTTTTGATCACacacttttttttcataag
aaccagtaaattttggttcaggctgaactgttcttaatttctttcaaatt
ctcaagctcgttaaatgttcttacagtattcttaaaGTTGTtttaaaaac
tggtaaaatcagTACTCATTcttaatattttctaaaatctgaggctcaga
ttgttcttaattcgttcttaggttttggccaattttcagcctcgtgtttg
tataaaaatgttcttataaaaagcgtgtatttccaATTACCACTTTTCCT
ATATTTTGGCGTCAcaccaaaaaagttaaaaaagtgtCTTCGTGCCGCAC
TCTAAAAAGTGTCGCAACTAATTCTTTAAGTGTCACaactaattttttga
aaactttgagaTCCCTGCGATCACCGCGATGCTTATTTGAGAAAATATGA
TAGAACTTCATTACAACTCTTGAAATTTTCCTAGAAAGATTTTCTTGTCA
AAATTTCTAGACTCTAGTCCACACCGGGTGAAAAAAAAGCTTTCGAAGGT
GTCGAAGGTGTGGAAAGACATGTGTGATAATTCTACAAAGTTAGTACGGC
TGAAACATCCATGTatcacagccccactggaaaatctggcaaaaattttg
tccccagTAGGAAactaccctgaaatttcagcccgACTAAGATATTGACT
TAGATTTTATCCCCACTCAAAattaaatgtttgaaaattgcactccaaaa
acaTCCCAagtggattttttaaccttcgAACAATAGagtttctatcccca
ttggaatttcaataggaatttttatcccactgAGGGGAAATCTtccatcg
gggctgtgagactGTGGTGTGCTGAAGTGTGCAAAATTAAATCATGTGAC
CATTTAGCCTGTTTCGAGCCTTTGCTTCAAACTATGACCTGATCACACGT
GACctgcatttttttcaaaagaattctaaatGCGCGGCGAACCTAAGGCT
TCACTGCTTCTTGTTGGAGAAAAAttgaagattcatctctagccccttcg
ggacTTTAAACTCAATACACAATAGCTTAAACCCAAACCCCAACACACGC
AGCTGCTGAGTGGCCAAGAATTTTACCTTCGTTTCTTATTAATGATAACT
ACTCCCTCATAGATAAAAATGGCCATTTGGATTATGCCGATAAAAGTGGT
ATTTTGGACGGAGCTAACGGTGACATGGGAGCTAACGAGGTCGCATCTTT
TGATCCCATCTTCTTTCTACATCATGCAAACATTGATCGGATGTTTTGGG
TGTGGCAAAAGAAATGGCATAAAACTGGACGAGAAGGGGATGAGAAGTTT
ATAATCACTAATGACGATAAAGGTAAAACGTTGTTTGGACGTTCATCGAa
cgttaaggccggtctccgctttcgcgcgaaatgagtGAAATGAGCGAAtt
ctttttaacgtttttgtacggtcattggtcggttgaaaaatgaagcaatt
ccatttgTCAAAATTGATGTAACAGTTGTAAAAAGTTGAGCTTTCTTGtt
tgcgcgaaacttttttatgacgtaatcttttcttcaggaaaAAATGGGTA
ggaaaaaactgtcgcccatttcgacGCATGGAGGTTGGGTATTGTTGACT
AAAGGGGTGGAAAAAAAgcttttcgagttaaaaagttGAATAGCCTTCAc
tgtaatacaccttttcgaccgtagccacctaTTGCCGCGCAGGCATTTTT
TCCTGCTTTATCCCActtaaaccgtcccagtccttttttcgcaccaatag
acaatagaaaaatgcgtaAAAAAAGGATCGGGACAGTTTTAGTGGGAAAA
AGAGGACGAAAAAATGgtcgcgcgactacggtcgaaaagatgtacATTCT
TGCTCTGTCGTTAAAAAGGTTCAAAAGTGAATGGAGGCAAAAGCGGCGGA
CAAGGACCAACTCCCGGACAGAACATGGGAGATGATTTGACAATGGACAG
CGAATTGAGACCGTTCAAAGCTAAAGGTATGCttcccagctagcacacaa
agttgtttcaacgtttatttaacgttcacaacgttcaggtaacgttagat
gaacgttgaaacaatatttgtgtgccagctgggttaaaAGTCGTGAAAAT
ATTGGAAAGTTATAAGGCCCCTTATAACATAACCAACGCAATATTactaa
atatgaaaaattcgaaaagaaaattggaaaaacgaagatgaaaaatgaag
aagaaaaaaacaacttcTGGAAAAAGTGTACTTTTAATCGTTTTCTTAAT
CTTAGAACATTATCACTATGAAAAAActtattcaaaaatattattttaat
caaaagatatgGCCAAAAGTTCGTCACTGTTTGACTTtaaaaagcataaa
aaataacaaagagaAGCCCATAGGCAACCAAAGAGAAGTTTAAAGATGCA
GTTCTTGactgaataattattttttgatttttttctccatttcttATAAT
ATGAAAATGACGATAATGGCAAAATTCTACTCGAAGTTGatttgtttctt
cttcatttttcatcttcgttttccAAACTATTTATATTTCTTTCTATTTT
ATGATATTCGACTcctaattatcttttcaacgagcgcAGAAAACCGCTTA
GGTTTCCTAATGTATTACGGGAGGTTTCCAAATGCATTATGGAAGTTTTA
CCAATGCATTATGGGAGGTTTCTTAATGTATTATGGGAGGTTTCTTAATG
TATTATGGGAGGTTTCCTAATGAATTATGGGAGCTTTCCAAATGCATTAT
GGAAGGTTTCTTAATGCATTATGGGAGGTTTCCTAATGCATTATAGGAGC
TTTCCTAATGCATTATGGGAGCTTTCCAAATGCATAATGGAAGCTTTCTT
AATGCATTGTGGGAGGTTTCCTAATGCATTATAGGAACTTTACCAATGTA
TTATGGAAACTTTCCTAATGCATTATGGAAGCTTTCCCAATGCATTATGG
GAGCTTTTCCAATGTATTATGGAAGCTTTCCCAATGCATTATGGGAGCTT
TCCCAATGCATTATGATGCACAATGAGGTTATGACTATGTTCTATTTGTA
GTATTTATTATCCTTGGTGAATTTATTTAATCTTTTCTCTCAAATAGAAA
ATTTCCAAACTGCAAACGGTTGTGTAGACATAGAGGGCCAACTTGGTTAT
ACTTATACAATTGGATCATTGGACCAAGAATATTGGCCAAGATTACCCAA
ACGGAAATATGAAGATGTGAGTACAAGTTTGATTTCAAATTACACCCTGG
GCACCCTCCTACttgaaaaatttgccaaaatatcaTCTCCAGTGTAAAAT
AGTATATACAACTGATGTCtttgctgaaaataatcaggTGAAATAATCCC
TACCTGCAAAATATTGACCTTTTTTCATcaccactgaattttttaactta
aaaatACTTTTACTGAAATTCGAATTCCCCAGTCATGCAAATATAAGATA
ATATAAGTGAATATCATCTGTTGGACTGGCTGCCTCACTCGTCCCTGGAA
GTCTGAGATCTAGTAAACAATGGAATTCTAGGATAGAGCACGAGGGCGGT
CCGCCAATATTCCACGCTGTCGAAAGCGTGTCAAATGCAGTTTTACTTTA
ACATCAAAATCTCATATTGTATCATGGCAGATTGGTGAACCGGAAAGCAA
CGTACCAGCCGCCCCGGGACTGCCCACCGTTCGAAAGACAACTGGTGAAC
ATTTGAAGTCCAAGATGAAATCTTTGaaagagaaaatcaaaaagaaaaag
tcaggCCCGTCGGCCGCCCCTAAACCTAGTACGGGTGGGGGCGGAACACC
CATAGAAATTATGTATGAGATGAACCACAAGATTACTTCTTTGGgaaaag
aaagtgaagaaaaacagGAAGGATGGCCTGAAGAATTCAAGATGGTTAAT
GACAGCTTTGAAATAGACGGCACTAATTTCAAACGTGAATTTTATACCAA
AGTGGAAGGGATTGACATGAATCAGTTTTATGGGTCGTTTATCGTTATCA
CTGGAAGAAGGATTTATGACGAGCAATCCAATAAGTACGTGTGGACAATT
ATTCATCAGAAAGCTGTTCTCGCAAGGTAAAAAAGGATTTCATTTCAACG
TATATTTACTTTTAAAACAATGTTCAGACCGTTTCTTATTGCTCCAGTAT
GGTTTTCGTTACGGACCGaatgtgttcatattggtttcggaacgtttcgg
agcaagaaaacggtgCAATTCCGTTCCAATGAAAGTAGtagagcgaaacc
gtttcgatctgttttgctttgtaacgtcttcttttctgacgtttcgaatt
ttgacgttcacactggCTTCGAAACTGTATTGTTTCGTTTCGGAatggaa
ccgtaacgtctgaacatggtctaagtgTGTACTATTTTGTCCTGCCACAT
GGGaaccaaaaaaatcaatacaCTCTATGAAAGGGtaaaaaaattacgaa
attCACCGGGCTGTGAACCAGGGATATATTTATATATATAGAAAGCTATT
AAAAATATCTATACTAGACGAAAACTAAAcacattttttttccatttaga
TGGGACAAAAGCGCATGCAAAAATTGTCAGAATCACAGCTCTGTTGATCT
GTGCTTTTCAATGGGAAAAGTTCTTCCAGgagatttattgaaaaataatt
ggaATGTTTGGTTCGTCTTTCGCAGAATGGATAATCACAGATTTGCTATT
TTTCCTGTTGTCCCTTACTCAGATGGTAATGGAGAAAGAGTCCCAGAGAA
TTCGTATCGCGAGATCAATCACTTTGTCAGAATTTGTGAAATGCCCAGTA
AGAATTGAACTGAGGTGTCCAGTATAAATTAAACTGTGAGGTGCCAATTA
TAAATTGCATTTTGAGGTGCCCATTATTGAATTAAACTGAGGTGCCCAGT
ATGAATTAAACTGTGAGGTGCCAATTATAAATTGCATTTTGAGGTGCCCA
TTATTGAATTAAACTGAGGTGCCCAGTATGAATTAAATTGTGAGGTGCCC
AATATGAATTAAATTATGAAGTGCCCAGTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030975XLOC_030975Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048735-exon-scaffold_146-1491911889:267508..267532TCONS_00048735-exon-scaffold_146-1491911889:267508..267532Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:267508..267532TCONS_00048735-exon-scaffold_146-1510915933:267508..267532Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:267508..267532TCONS_00048735-exon-scaffold_146-1575043694:267508..267532Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:269845..270095TCONS_00048735-exon-scaffold_146-1491911889:269845..270095Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:269845..270095TCONS_00048735-exon-scaffold_146-1510915933:269845..270095Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:269845..270095TCONS_00048735-exon-scaffold_146-1575043694:269845..270095Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:270981..271171TCONS_00048735-exon-scaffold_146-1491911889:270981..271171Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:270981..271171TCONS_00048735-exon-scaffold_146-1510915933:270981..271171Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:270981..271171TCONS_00048735-exon-scaffold_146-1575043694:270981..271171Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:271898..272054TCONS_00048735-exon-scaffold_146-1491911889:271898..272054Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:271898..272054TCONS_00048735-exon-scaffold_146-1510915933:271898..272054Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:271898..272054TCONS_00048735-exon-scaffold_146-1575043694:271898..272054Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:273832..274119TCONS_00048735-exon-scaffold_146-1491911889:273832..274119Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:273832..274119TCONS_00048735-exon-scaffold_146-1510915933:273832..274119Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:273832..274119TCONS_00048735-exon-scaffold_146-1575043694:273832..274119Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:275270..275479TCONS_00048735-exon-scaffold_146-1491911889:275270..275479Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:275270..275479TCONS_00048735-exon-scaffold_146-1510915933:275270..275479Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:275270..275479TCONS_00048735-exon-scaffold_146-1575043694:275270..275479Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:276026..276934TCONS_00048735-exon-scaffold_146-1491911889:276026..276934Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:276026..276934TCONS_00048735-exon-scaffold_146-1510915933:276026..276934Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:276026..276934TCONS_00048735-exon-scaffold_146-1575043694:276026..276934Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:277111..277373TCONS_00048735-exon-scaffold_146-1491911889:277111..277373Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:277111..277373TCONS_00048735-exon-scaffold_146-1510915933:277111..277373Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:277111..277373TCONS_00048735-exon-scaffold_146-1575043694:277111..277373Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:277788..278233TCONS_00048735-exon-scaffold_146-1491911889:277788..278233Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:277788..278233TCONS_00048735-exon-scaffold_146-1510915933:277788..278233Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:277788..278233TCONS_00048735-exon-scaffold_146-1575043694:277788..278233Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:278707..279023TCONS_00048735-exon-scaffold_146-1491911889:278707..279023Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:278707..279023TCONS_00048735-exon-scaffold_146-1510915933:278707..279023Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:278707..279023TCONS_00048735-exon-scaffold_146-1575043694:278707..279023Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1491911889:279101..279189TCONS_00048735-exon-scaffold_146-1491911889:279101..279189Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1510915933:279101..279189TCONS_00048735-exon-scaffold_146-1510915933:279101..279189Clytia hemisphaericaexon
TCONS_00048735-exon-scaffold_146-1575043694:279101..279189TCONS_00048735-exon-scaffold_146-1575043694:279101..279189Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_146supercontigscaffold_146:267508..279189 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00603979	0.00588975	0.0205157	0	0.199748	0.226448	0.306091	0.306456	0.0916131	0.12948	0.0367147	0.0636929	0.260983	0.0959521	2.18559	2.40145	0.0391087	0.0534468	113.78	140.459	0.058997	0.0427254	0.062326	0.0566634	0.033615	0.0729922	0.0539939	0.0254123	0.0481859	0.01366
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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