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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048812 ID=TCONS_00048812|Name=TCONS_00048812|organism=Clytia hemisphaerica|type=transcript|length=1084bp
cacaactaaaaaatatcatcaatgctttttaaaacgagtcagtgatagag
aatcataacatattatttcgattcaattaaaagtgacacttccataatta
atagttattactgttatacatttggggatcatgtaaaagatttctttcga
aagaaactcacttcgattacacttggaggtttctggggaattcgtaaata
gtaaactgcattatattctttgaaaacttaacctctgatactcagggtat
tgattagctttttttattttttcatcaaggtgacggtcaaaggccagctt
ttgatcaagtatgagaccaagatgtttttgatgatcctGAACTGCGATGG
CAGCATTATTGAAAGTAATTTCTGGGGGGTTGAATTAAACCTCCGGGTAA
AGTACACTTCAACTGCCTGTTTAGAAAGATCAGGGTTGAAGGACattttc
cattgatgagcccactCACTTATCTTCTGCATGTCACTGTTCATATGGTA
CTTTCAGTCAATCGTGTACCAGTATCGTAAATTAGGTattatattgatat
ttttgcGGTGGAGAAACGCTGGACCAGCGAGGGCTTTGGGCGAATCGTCT
ACCAGTGGAAACGGTAATTAGGGCAAACGCTGGATCAGTGGAGCTTTGGG
CGAATCATGTACCAGTGGAAACGGTAATTAGGGCAAACGCTGGATCAGTG
GAGCTTTGGGCGAATCATGTACCAGTGGAAACGGTAATTAGGGCAAACAC
TGGACCAGTGGAGCTTTGGGCGAATCGTGTACTAGTGGAAATGGTGATTA
GGGTAAACGCTGGACCAGTGAGGGCTTTGGGCGAATCGTGTACTAGTGGA
AATGGTAATTTGGGCTAACCCTGGACCAGTGAGGGCTTTGGGCGAATCAT
GTACTAGTGGAAACGGTAATTAGGGCAAACGCTGGACCAGTGAGGGCTTT
GGGCGAATCATGTACTAGTGGAAACGGTAATTAGGGCAAACGCTGGACCA
GTGAGGGCTTTGGGCGAATCGTGTACTAGTGGAAATGGTGATTAGGGCAA
ACGCTGGACCAGTGAGGGTTTTGGGCGAATCGTC Run BLAST on NCBI transcript from alignment at scaffold_146:467221..468304 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048812 ID=TCONS_00048812|Name=TCONS_00048812|organism=Clytia hemisphaerica|type=transcript|length=1084bp|location=Sequence derived from alignment at scaffold_146:467221..468304 (Clytia hemisphaerica)
GACGATTCGCCCAAAACCCTCACTGGTCCAGCGTTTGCCCTAATCACCAT
TTCCACTAGTACACGATTCGCCCAAAGCCCTCACTGGTCCAGCGTTTGCC
CTAATTACCGTTTCCACTAGTACATGATTCGCCCAAAGCCCTCACTGGTC
CAGCGTTTGCCCTAATTACCGTTTCCACTAGTACATGATTCGCCCAAAGC
CCTCACTGGTCCAGGGTTAGCCCAAATTACCATTTCCACTAGTACACGAT
TCGCCCAAAGCCCTCACTGGTCCAGCGTTTACCCTAATCACCATTTCCAC
TAGTACACGATTCGCCCAAAGCTCCACTGGTCCAGTGTTTGCCCTAATTA
CCGTTTCCACTGGTACATGATTCGCCCAAAGCTCCACTGATCCAGCGTTT
GCCCTAATTACCGTTTCCACTGGTACATGATTCGCCCAAAGCTCCACTGA
TCCAGCGTTTGCCCTAATTACCGTTTCCACTGGTAGACGATTCGCCCAAA
GCCCTCGCTGGTCCAGCGTTTCTCCACCgcaaaaatatcaatataatACC
TAATTTACGATACTGGTACACGATTGACTGAAAGTACCATATGAACAGTG
ACATGCAGAAGATAAGTGagtgggctcatcaatggaaaatGTCCTTCAAC
CCTGATCTTTCTAAACAGGCAGTTGAAGTGTACTTTACCCGGAGGTTTAA
TTCAACCCCCCAGAAATTACTTTCAATAATGCTGCCATCGCAGTTCagga
tcatcaaaaacatcttggtctcatacttgatcaaaagctggcctttgacc
gtcaccttgatgaaaaaataaaaaaagctaatcaataccctgagtatcag
aggttaagttttcaaagaatataatgcagtttactatttacgaattcccc
agaaacctccaagtgtaatcgaagtgagtttctttcgaaagaaatctttt
acatgatccccaaatgtataacagtaataactattaattatggaagtgtc
acttttaattgaatcgaaataatatgttatgattctctatcactgactcg
ttttaaaaagcattgatgatattttttagttgtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048812-exon-scaffold_146-1491911889:467221..468304 | TCONS_00048812-exon-scaffold_146-1491911889:467221..468304 | Clytia hemisphaerica | exon |
| TCONS_00048812-exon-scaffold_146-1510915933:467221..468304 | TCONS_00048812-exon-scaffold_146-1510915933:467221..468304 | Clytia hemisphaerica | exon |
| TCONS_00048812-exon-scaffold_146-1575043694:467221..468304 | TCONS_00048812-exon-scaffold_146-1575043694:467221..468304 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_146 | supercontig | scaffold_146:467221..468304 . |
Blast
The following BLAST results are available for this feature:
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