|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048819 ID=TCONS_00048819|Name=TCONS_00048819|organism=Clytia hemisphaerica|type=transcript|length=1906bp
ggagtgaaaaaaataaataaattctaatGTTTTATTGAACACTAAACATG
ATCTTTATAGTGGGAACTGGGACGTATTTTTTCGTTCAATTTTCACCCTA
AAAAAGCATCACAAAAGAAattaaacgaatgaagaaaaaGGAAGCTGGTT
TTTGTGACCCTTATTCATTTCAGATCTTTTGGTTTCTTTTGCTATACTGG
ACAAAGAAAAATTGATGATATTACAATCTctaaaattgtacaaaataaaT
TCGTTTGCGCTTTTTTTAGTGAGGTGGTTGATGATAATCAGCCCCTATTC
AACTTGAGTCATTTTGTCAACGGTAGTTTGGAAACTTTGGAGTTTCAGCT
GATTTGGCAGACTACAGAGAAGCTGGCGTTAAATAATAGCCGCCATCTGC
CTCCAGTGTCACCGTCGGGTGGTAGTACATGCAGTGCAAGTAAAGAATCT
ACAGAGTTACTGGAGATGAATCATAACAATGTCGATATTAAGATTGACAC
CAATAGAGATCGTGACGAAGGACTTGGACTTTGTACCTGGTTGTTGACAC
TAGCGGCCATGCTCCTTGTTATTTGTACTTTCCCAATATCACTGTTCTTC
TGTATTAAGATTGTACAAGAATATGAACGAGCTGTTATCTTCAGACTTGG
TCGTTTGTTAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTCGTACTAC
CATGCATTGACACTTACATGAAGGTGGATCTCCGTGTCATTTCATTTGAT
GTTCCTCCTCAAGAGATTCTAACCAAGGATAGTGTCACTGTCGCTGTAGA
TGCTGTTGTCTATTTCAGAATCTCAAATCCAGTATGGTCTGTAGTCAATG
TTGAAGATGCTCACAGATCAACAAAATTGCTTGCACAGACAACATTGAGA
AATGAGCTTGGTACTAAAAACCTAAGTGATTTATTATTGCAACGTGAAAC
TATTTCAGAATCGATTGCAAGGATTCTGGATGTGGCAACTGATCCGTGGG
GGATGAAAGTTGAACGTGTTGAAGTTAAGGATGTAAGATTACCACAGCAA
TTACAACGTGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAGCAAGAGC
TAAGGTCATTGCCGCTGAAGGAGAGATGAATGCAGCGAAAGCTTTGAAGG
AAGCTGCCGAAGTCATCCAGGAATCACCACAAGCTTTACAACTCAGATAT
CTTCAAACCTTACAAACCATCTCAGCTGAAAAGAATTCAACCATCATTTT
CCCACTACCGATTGACATGTTAAATAAAGCACTATCGTAAAGAGGAAGAA
TCAAGAAAATTGTGATTTTGATTTACGTTAAAGCACTATCTTTATAAGTT
ACTTGAATaactttggaaaaaaaacaacagactTTCGACAACTGATAAAC
AAAATATGGCGGAATGGAATTGTTTATGAACTCACAACTTCTAATGAAAG
CCTTCGATTGCAAAACGTGAAATCTATCGTCCATGACGtctttataacgt
ttttatgACGTTAAAACAACTTCGTTTgtcgattttcaaattttcagaac
aaAACTGTAACATTTGGTCAAATGCTACCGCAACTTTATAATGCCAGATA
GTTAATTACGCTAAAAATATCACGCCAATAACCCCTATTACTTTATATTT
ACTGTAGAAACATCATTTTCCCGTTACCGATTGACATTGTAAAATTGTAT
AATAAAGAAATAGTTTTAGCATATTATTATATGAAAAGTGTAAGATTGAA
ggcataaaaattatttttaagagaAGGCACTATACATTAACAAAATCACG
GTTCTAACTATAGTCGACTTCTAGACTGCTTAATACTGAATCGCAggcca
aaatcatatattgacctgtgccgaccaatcgagattctattcagcgcgca
atcaac Run BLAST on NCBI transcript from alignment at scaffold_147:30097..42466+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048819 ID=TCONS_00048819|Name=TCONS_00048819|organism=Clytia hemisphaerica|type=transcript|length=12370bp|location=Sequence derived from alignment at scaffold_147:30097..42466+ (Clytia hemisphaerica)
ggagtgaaaaaaataaataaattctaatGTTTTATTGAACACTAAACATG
ATCTTTATAGTGGGAACTGGGACGTATTTTTTCGTTCAATTTTCACCCTA
AAAAAGCATCACAAAAGAAattaaacgaatgaagaaaaaGGAAGCTGGTT
TTTGTGACCCTTATTCATTTCAGATCTTTTGGTTTCTTTTGCTATACTGG
ACAAAGAAAAATTGATGATATTACAATCTctaaaattgtacaaaataaaT
TCGTTTGCGCTTTTTTTAGTGAGGTGGTTGATGATAATCAGCCCCTATTC
AACTTGAGTCATTTTGTCAACGGTAGTTTGGAAACTTTGGAGTTTCAGCT
GATTTGGCAGACTACAGAGAAGCTGGCGTTAAATAATAGCCGCCATCTGC
CTCCAGTGTCACCGTCGGGTGGTAGTACATGCAGTGCAAGTAAAGAATCT
ACAGAGTTACTGGAGATGAATCATAACAATGTCGATATTAAGATTGACAC
CAATAGAGGTCAGTTACAGTTTCTTCACTCTCCCAGGGGTTAAGTTAGGT
CCcggttactttaatgggataaactttcagGGGATTAACTTTGGCAGATG
GGCCTAtctgcgaaattcaaaaattttgcagggacttaatttcgcggatg
atgattaaatctaattttgtaatcaaattttgaaaatagggGTACCAAAC
AAAACTTTGATATGGTGGTGtgcgaaaattcaaaaatcaacgaAGAGATT
TTCTTTAAAGCGTGGTTTGAGTAGTCTGATTTGTGGGACGAAAAAACGAC
gatataaatttaaatttttgcggATCGAAGAAActgaaagaaatttcaaa
atttttgcgggtatttaatttcgcggatgaggcccttccaaatttccatt
tcaaaacTGCAAAATaagcgaaatttaatccccgcgaaagtttatcccat
tagaGTAACTATTTTATCATATAACTCGAACTAACAGTGGACATCGCCAA
TTcgaacttttattattattattactattattcaaatctttctataatat
TTAAACTAATTTTCAGTCCCTATAAAAGGAAAACCCTAAAATGCTTTCTA
TAGNNNNNNNNNNNNNNNNNNNNNNctctgacggagacggaaaattagac
aattttagtgcggaaaaacggaatttagcaaaataatttgcggaatttcg
gaattagtaaaaaatattcaaaatttgcggaattttcgacaaaaatattg
aatttcaaaggaattttcggtgacggaattctggttcaatttaagacggt
ttgacggaaattggagaaaaatttggcggaattgcggaattgGGTACCCC
CTGAACCCCCCCCTTAAGGGAAATGCATTCGAAACGAAAGCAAATCTATA
TCTCCTCCTATCAATAGATAAAAAGGTATTGGAGTTTCATGGCTTTTCCT
TTTCCAGCAGGtctaaaaatacataaaatcatATTTAAGAATTGTAGTTA
TTCAAATGCGAACTACCTTGTCTCAGTGATCTAAGGAGACCATCCACTTG
TCAACAACTCGAGTAAGAGGATAAGTATGTACTTGCCTCCACAGCAAACT
TAAGCTAAGAgtttcccaactttgaaaaaaatcacagccagtaaaattta
gaggttttacttaGTAGAATCGTTGAAGAANATGCTTTCTATAgctcgaa
tctctctgtaattcgaataaattAGACTTCCCATTCGACTTCGAAATGGC
GAAAGTTGTactgtaaaacattggtcccTGCACCTGGATAGTCATATGAA
AATACCTTTGCCTGATCCAAATCATTCGAAGAAAACTTTCGTTCCTTTTT
AATCGAGGTAGAAAGAGTCAGCTCTATACGTTGCTGACGAACTTCTGATA
CTCAGAACCTtaagggggggtttcatggttggcggaggagcggaatcggc
ccttttttcggacggagtggcggaatttggcgaaaatttagacggaatta
cggaaattgggttctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaac
acattttaaacacggcaattatgaaaaattcactatggtcagagcccacG
CGATTTTTTATCACCGTGTCGAGAAAAAAGCGTGGTCCCTAGCGAAAATC
AAAACCGCTGAGGAAAAAATGGCACGTATGGgtatattataatatagatt
AGGGTTCTTCATTGataaaatcatatttcaaaactttatcacatcaatac
aatttttttgtttctttttgaacaaatatgtaaattttcaaaaattaaaa
ttatgctGAAACCAACCTAAGAGTTAACAGCTGGGACATATAATATTACA
AAAGTATCAAGATATAATACCGACTTTAACTTGTTTAAGTATCCTAGATA
CTGTCGTATTTGAAATGACCGTTTGAGTTTacttgagtttttttttaaat
agagcATGTATGTATTTATAATCGTCGCACTTTAAGCTCTATGAAAGTCG
GTTGGTACCTGTAATGGTTGATTCGTTGGTAATGATGCTTTTCATGGAAT
TTGTCGAACGGACCATTATAATTGAATTTGTATTTCCCAATGCAATTTCC
ATCAGTGCCTTTAATCCACCAACCCGTGAATTGATAATCCTTTGCACAAT
TACAAGAAGAATAGTCATCATTATCCTTGTCCCAGGTCGAAAATTCGACT
TTGTTTTGGTAATCTGCGAACTGAGTTGCTGATTTCTGAGTTCCACCACT
AACGTGTAAAAGATAATTACTTCGTTCGCTATCTACCTGGAAATGTGTGA
ATGTGTTGTTATACCAGCTTGTATACCCAAGAAGTTTCATTTGAACCTTT
AATTCTGATCCTTTTGGGTAAACAGCCTGTGCAGATAAAACATGTATGTT
TTCATTTCCAAACCAAAATTCCCGATGCAGTTTCCCAAAGCCAACCTGGT
TAgtaggaaaattgaaaattaaggCGACAAGTCGTTTCTTTGAGCGATGT
ATGTTTTAAATCTTTCACAAATTTAATTTGAGCAACAGAGCAAtaactaa
taaaaaaaaaaggtgAATAACTTACCTTGTATTCATCCCATCTTCTGAAG
AAATTGACCGATCCATCCATACGTCTTTGAATAACGGTCCAACCGCCTCC
TGATGTTGTTTGATCACAATAAACTTGAGTCATTCGATATCCGTTCATTG
TGACCTTATAATAACCATCAATAGCCATCCCGTTTTGCCTGTGTGCTAGG
CAGTCACGTTCTGGTTTTATATTTCGGCAATCACAGTAGAATTTCGTAGG
AATGGTCAAATCATCTTTACAAATACATGAACCACATTTACCTGGAGCGT
GGAGCATGCAATAGgtggaagaaagttttaatcTTTCTAATAATTTTGTA
TAGTTTGCTTGAAGTcgtttaaaatcattttttaaactgCTAACATCGCT
GCTAGAACTGCATGCGCACAAGACAGAGAATGAAAGATAAAACGTTGGAT
GGTGTTTATTACTCCTTTCTCTAGTTTCCAATCAACGAAACCTCCTCTTT
ACACTGAAAAATAGCTTGCTGGAACTGGACATAAACCATTCTTTACAAAC
ATTTGGGATCTACAATCACCGCCGAAATACATtgacaattttgggtattt
tgatgtttttcagaattttaagttttaaagcTCGGACGAGAATTGcgatt
tcagtacttccactttgtttcattggatttcTCGATCTTTGAATGATTAC
CATGGTTATTTTCAGTTCGCTAAATTACCATActgaataaaattgatttt
tgtcgTTGATACAGATCATTTTTGAGTATTAACGCATTAATACTCACCCT
ACTGTCTTGATTCCTCTAGCTGATTGTACTGGGAAGGTGTCACTGGAGCT
CGAAATTTGACCATATCAGCATCCgatttttagcaaaattgtCAGGAAAA
GGCTCGACCAAATGAAAGACGGAATTTGGAAAGGTTGACTCTGTCAGatg
taaatttaaaaatttagtgACTTTGCAAACCTGTCAGACATTTTCAGagc
ttgaaaaaaataattctgatGACCAGTGGGACTTCCCCCGTATCCAATTA
AGCTTAAATGACCCCCGGGGTCTCAAGTACCCAATCATATGGACATTATG
AACATTATATAACATTGAAGAAAAGTTGACCTCGGAGAataaatatttga
tattttgggAAATAAATTTGATATTATCAAGAAAATTCTTGATTACACAT
ATTTGGTTCTAAAGCTAAAtactttgaatatatttttgctaAAAGATAAA
GACCTGGGAAGGGGGGTTAATTTCTTGATGAAGAACCATCAGGTTCATCa
gggaaaaaaaagtttttcaatcttgattaaaaagcaatcaTTTTGAGATT
TTCAAAGGTGGTATATTTGGACGTTGAAAATACTATACACAGTTTTTAAG
AAGCTTCTAAGGTCCTATCCTAAGGTCAATTGAAAGCTTCAATATTTCAC
AGTACTTAATTTTTACTAATTTTCTCTGCTTCCAacttttgatttggttt
ttaGTATTTCAATTAATTTGTTTTATAAACTTTAACATCGACTTCCCAGA
GATTGACTTTATTTTTCTACCCCCTTTTAACatcttttttttctatattt
tcacttgtatatttttgcaaaaaaaattattttgaaaacaagaataattt
ttatttttttatgcgCAATTTTAAACTTGTTCATTACAATGGAATGAACG
TTGTAAAACAGCTTGCTGTCTTTTATGCAAGCCGTCAATACGTTGAACTT
GTACTCCCAATGTGATCTGAtgtgtttctttaaaaattgaGTTCACCCAG
CACGAAAGCTTAAACAACgtcaaaattgtttcaaaatatgTCACTATAGA
ACTTTTATCtgaaagcaaaaaatatttaaaaacaattcACAGCattcatt
gaaaatgtttttcaaaacttgatgaAGACGCTCTTGGTTGTCTGTCTTGA
AAACAAACGATTGGAAAGTCTAAAAGACGATACTATGACCGTCCCGAAAC
TTTAAGAAGCTTTACCAAATAATCTACTGTGGTTATGTTTTGAAAGAAGA
TTTTTACTTTCATTCTAcaacaaaaaattgaagaatattTCTTCATATAA
AACGAAATCGAAAACTTGtcacttttattttcaaactagaAAAAGTATTG
ATGAAAGACATAGACCgcaatttttttgttaattttttataactCTTAGA
CAGAGATTTGCATTTTCATGATAGATTTTCTGCCAAAAATTCTTGTTGTT
TGAGtgatatattttcaattttttcatctcACAAAGTTCTCTCTCTCATC
GTATTGAGCAGTTATGTCggtgaagaaagaagaaaacagcAGACATGAAT
TTGCCACTTTCCTAGTTTCAACTCAGGgttagaaacttttttgaatcttg
acatttttttagatttctaggACTAGGACAAAATACATATCGATTTTATC
TCGCGAATGTTAAGAACACTTGAGCCAATTTTGCGGTCCTTTTTGACCAG
CCTTAACTTCCACCATTATGGGAGTAACTTTCAATTTGCGCAACGTGTGT
TGAATTTAAGGATAAGAATTTAAAGATCaggagattcgaattataaatcA
TTTGTCGTCAGTCTGCAAATAGAGATTTAATCATTATGTTGACGAATTTG
atattcgaaatttattttctttaatttgtaTTGCTTACTCATTAAATCTT
CTATAACACGAAATCATCCTATAACTTAAATCATTTTTTCTGGTTTCCTG
CTAGaataattttacattttcagCATTTCTTTTACTGGATTTCTCCTTAA
ATCGGATGACTTCTTATGCTACAGACCTGGTGGAACAACCATtgaaagtg
gggaggctgaaaatgagataaaatttgctaggaatttgagagaaaacctc
atttgctcaaaagttgggaggctgaagtctctcCAGTCTCCCTTCCACCG
GGCCTGTGCTAGTTacagataccttatcggggaaagaaatgtcggagttt
tattcagttagggttttttttttgcggTATAAAATTTTAGGTANCAAAAT
GAGATAAGatttgctaggaatttgagagaaaacctcatttgctcaaaagt
tgggaggctgaagtctctcCAGTCTCCCTTCCACCGGGCCTGTGCTAGTT
acagataccttatcggggaaagaaatgtcggagttttattcaGTTAGGGT
TTTTTTTTGCGGTATAAAATTTTAggtaaatgttttggtcggTGATAAAA
AATCGGGTCCAAGTTTTGGTCAGGTGATAAGATGTCGGAAAATATTTCGT
CGGCGAAAGATTTCGTCAacacctcaaaattttcgtccctttcccccgac
attttttttccCGATAAGGTACCACATTTCCTATAAAACAACGTTACCGt
ggttttaagatttttaaggTTTAGGTGGGGTTTAGGTACGACATTGTTCA
GAGAGCAGCTCTTATCAAAGAATGTGGAATGTCCTAACTAACGGTGCTCT
TTTCAACGGTGCTCATTTGAGGGGGTGCTTAATAGAGGAAATACTTTAAG
GTCCCGAATAAATGTCCCCAGACCCCCTCATTCTTAAAGACCCTCTCCCG
TTCTGAGCTGCTCAAAATTGTCGGGTTTTAGTATATATTTACCTCATTTG
GGGGATTTTAGAGGTACGATTTCAGAACCCCCGGCAATAAGTTCCTCCCA
GTTTATTATACTATAAAAATCGGACCCCTCATCTTTTATTCGGGGACTTA
GATTACGCTAATCGATTCATAGACTATCATTTTCTTTAGATCGTGACGAA
GGACTTGGACTTTGTACCTGGTTGTTGACACTAGCGGCCATGCTCCTTGT
TATTTGTACTTTCCCAATATCACTGTTCTTCTGTATTAAGGTAAGTCTTT
TCATTAAATGCTGTGTTTTTCTAAGGAGCTAAAGAAAATGACTTTCTTGG
GTTTCAAGGTTGTGGGAGTAATAGCATCGGCCCATTTTTCGAACGTGAGG
GatatatttcaacaaaaatttaaatggGGTTTTTGAAATTTGGTCCTTTG
TCAAAGACGGAATTTGGGCTGCTTTATTCCAAAAAGTTTCTAGGTTGGAT
TTTTGGAATTGTCAATAATTATatatataaaacaaatttttggtTACGGG
GTGACAGAAACTAGGGAAAAACTTATTTTGAGAGAAATGATTTCTCTTTG
AGTCAGGTCCAGGATATCCCGAATCTAGTACAACCCAACCGGAAAAAAAT
CTTCACAAATCTTTTTGAATGACTTGTGATTAGAGCAACGAGTCTCTATC
GATTAAGAGGAGAGCTTGAATTATCCTTGATTTCTGAGTTAAGGTGTAAG
CTTATGAGTCTAgttaatcaaattaataaactTTGTGAGGCAAAACTGTT
TGATTTAACAGTCAGTTGTTAATCATAAATTTCCTTAACATTtgtctaaa
ttttcaaaaagaataaGTCGTCAGTTGATAATTCTCGTaatcatgaaaat
tttccaatcctattttgatttttcaaaacgaCTATAATTCAATTtactaa
atttttatttttcaaatatttttttctttttcattttggaagaaaattga
aatttatatAATTGATTCACTCATAAAGAAACTCTGTGTAAAATAGTTTT
GTTTTCCAGAGGACCCAGCAAGAACAATCTTGCATAGACAACAGACCCCT
AACTGATTTTTCATAAGCCTTAGAATATTTTGTTGTCAGGAGAAGTTGCC
CTTCAAATGCAATAGATTGAAGAAGAATTTCCCATCGTTCGTACGTCTGG
GTCAAAACAGatcttgaaaatttcattgaaaaatatactATTTATTGGAA
TTTTCCACCTGCAGtcgtattttcaaaaaatgagatTTCTGAAAAAGTGT
ATTAAAATCCATATAGCGCCGATTGTCTCGATTTTCTGTCAATCAAAATT
ATAGTTACCCCCCACCCTATCGTGAGCATCCCATTCTTGAACTATTTCTT
TATAGTTAACCAAAATCTACTCTTTAGGTCATTCATGATCACTCATCTTT
ATATACCCTTTGAccggaattttttttcgaaagtggCACCCTaatcacag
atttataaagcccgaagggcacACTTTAAGGCatcacaggcaaaaaaatt
gaatatcgcaaaaaatattgttgctattgttttcaaaaacccgcgaagct
tctgattggtcaagcactgaaatttcattgtaatgtcacgtgacctaggt
aggatttcctacctaaccacggcacacttttcagccaaatcgcgacatct
aacccttcgggctttataaatctatgaccTTAATCCACGTAGTAGAGAGC
TACTACTTAATAGCGGTGTAAATACATCGAGAGCGTTAGATGCACTTTTA
ATCGAATACTTTAGATGATGTAGctccgttagacgttaatttttgacACG
GCagtggcttctttacgggtacaactttaaaaaaaactccgatcaaaaat
GACGAGtatagctttgtccagggtCAGTGGTCGTAGTCATCCTATTTGAA
TGATAAAGGTCTTATGAAAGTAATatcaatggggatgaaatatcTTCCAA
TtgggcgaaatcatagatttctGAATTTGcaagtattttatattttttca
aaacctaacCAATTAAGTGTCACTTTGGAATCAGAAAGGGtttttgaagt
caatttttccatACATATAGCCTTTCCTAGATCTAAAATGCCTACAATTT
TACGTGTATTTCCTCACACTACCTTGGTTGTTAAAAATGTATCATACCTT
ATTTTTTTCCTCTAAGATTGTACAAGAATATGAACGAGCTGTTATCTTCA
GACTTGGTCGTTTGTTAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTC
GTACTACCATGCATTGACACTTACATGAAGGTGGATCTCCGTGTCATTTC
ATTTGATGTTCCTCCTCAAGAGATTCTAACCAAGGATAGTGTCACTGTCG
CTGTAGATGCTGTTGTCTATTTCAGAATCTCAAATCCAGTATGGTCTGTA
GTCAATGTTGAAGATGCTCACAGATCAACAAAATTGCTTGCACAGACAAC
ATTGAGAAATGAGCTTGGTACTAAAAACCTAAGTGATTTATTATTGCAAC
GTGAAACTATTTCAGAATCGATTGCAAGGATTCTGGATGTGGCAACTGAT
CCGTGGGGGATGAAAGTTGAACGTGTTGAAGTTAAGGATGTAAGATTACC
ACAGCAATTACAACGTGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAG
CAAGAGCTAAGGTATATTCAAATCTTACGTCATCTTGTCTACGTAAATAT
CAGtctaaaaagtcaattttttcgccacacataccgtcagttggtaaatc
CACTGCCCTCTGGATCTGTGGTAAGGGGTGTGCTTATCAAAAAGGAGGTA
ACAGGGACTTCAGTGGACCTTTCAAACTGTCATAAACCACGAAAATAAGC
AACTCCCAACGATTTGTAGGGTTCTCGCTAATCGCTGCACATGGtatttt
gattaaaatattCAACATTGAAATCTTTGAATATGGATCTTTAAGTTTGA
GTGGACTTAAGGACCTCAAATGAAGTATTCCCGCTCAAATTCCTGCTATA
TTCTAATATCCCGCTCAGCTCTTTAGCCATCTGGCTGTAGATCCCGTGAA
ATAAACTATCCAAAATTTTCAGATTACTTGACTAGTTAAATATAATATTG
ATTCAATCTATTTTCCAGGTCATTGCCGCTGAAGGAGAGATGAATGCAGC
GAAAGCTTTGAAGGAAGCTGCCGAAGTCATCCAGGAATCACCACAAGCTT
TACAACTCAGATATCTTCAAACCTTACAAACCATCTCAGCTGAAAAGAAT
TCAACCATCATTTTCCCACTACCGATTGACATGTTAAATAAAGCACTATC
GTAAAGAGGAAGAATCAAGAAAATTGTGATTTTGATTTACGTTAAAGCAC
TATCTTTATAAGTTACTTGAATaactttggaaaaaaaacaacagactTTC
GACAACTGATAAACAAAATATGGCGGAATGGAATTGTTTATGAACTCACA
ACTTCTAATGAAAGCCTTCGATTGCAAAACGTGAAATCTATCGTCCATGA
CGtctttataacgtttttatgACGTTAAAACAACTTCGTTTgtcgatttt
caaattttcagaacaaAACTGTAACATTTGGTCAAATGCTACCGCAACTT
TATAATGCCAGATAGTTAATTACGCTAAAAATATCACGCCAATAACCCCT
ATTACTTTATATTTACTGTAGAAACATCATTTTCCCGTTACCGATTGACA
TTGTAAAATTGTATAATAAAGAAATAGTTTTAGCATATTATTATATGAAA
AGTGTAAGATTGAAggcataaaaattatttttaagagaAGGCACTATACA
TTAACAAAATCACGGTTCTAACTATAGTCGACTTCTAGACTGCTTAATAC
TGAATCGCAggccaaaatcatatattgacctgtgccgaccaatcgagatt
ctattcagcgcgcaatcaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048819-exon-scaffold_147-1491911889:30097..30604 | TCONS_00048819-exon-scaffold_147-1491911889:30097..30604 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1510915933:30097..30604 | TCONS_00048819-exon-scaffold_147-1510915933:30097..30604 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1575043694:30097..30604 | TCONS_00048819-exon-scaffold_147-1575043694:30097..30604 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1491911889:38686..38786 | TCONS_00048819-exon-scaffold_147-1491911889:38686..38786 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1510915933:38686..38786 | TCONS_00048819-exon-scaffold_147-1510915933:38686..38786 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1575043694:38686..38786 | TCONS_00048819-exon-scaffold_147-1575043694:38686..38786 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1491911889:40713..41207 | TCONS_00048819-exon-scaffold_147-1491911889:40713..41207 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1510915933:40713..41207 | TCONS_00048819-exon-scaffold_147-1510915933:40713..41207 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1575043694:40713..41207 | TCONS_00048819-exon-scaffold_147-1575043694:40713..41207 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1491911889:41665..42466 | TCONS_00048819-exon-scaffold_147-1491911889:41665..42466 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1510915933:41665..42466 | TCONS_00048819-exon-scaffold_147-1510915933:41665..42466 | Clytia hemisphaerica | exon |
| TCONS_00048819-exon-scaffold_147-1575043694:41665..42466 | TCONS_00048819-exon-scaffold_147-1575043694:41665..42466 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_147 | supercontig | scaffold_147:30097..42466 + |
Blast
BLAST of TCONS_00048819 vs. Swiss-Prot (Human)
Match: STOM (Erythrocyte band 7 integral membrane protein OS=Homo sapiens GN=STOM PE=1 SV=3) HSP 1 Score: 339.347 bits (869), Expect = 4.413e-111 Identity = 175/253 (69.17%), Postives = 213/253 (84.19%), Query Frame = 1
Query: 517 EGLGLCTWLLTLAAMLLVICTFPISLFFCIKIVQEYERAVIFRLGRLLAGEAKGPGIFFVLPCIDTYMKVDLRVISFDVPPQEILTKDSVTVAVDAVVYFRISNPVWSVVNVEDAHRSTKLLAQTTLRNELGTKNLSDLLLQRETISESIARILDVATDPWGMKVERVEVKDVRLPQQLQXXXXXXXXXXXXXXXKVIAAEGEMNAAKALKEAAEVIQESPQALQLRYLQTLQTISAEKNSTIIFPLPIDMLN 1275
+GLG C W+L + L + TFPIS++ CIKI++EYERA+IFRLGR+L G AKGPG+FF+LPC D+++KVD+R ISFD+PPQEILTKDSVT++VD VVY+R+ N +V N+ +A +T+LLAQTTLRN LGTKNLS +L RE I+ ++ LD ATD WG+KVERVE+KDV+LP QLQRAMAAEAEASREARAKVIAAEGEMNA++ALKEA+ VI ESP ALQLRYLQTL TI+AEKNSTI+FPLPIDML
Sbjct: 25 KGLGPCGWILVAFSFLFTVITFPISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDMLQ 277
The following BLAST results are available for this feature:
|
