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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048820 ID=TCONS_00048820|Name=TCONS_00048820|organism=Clytia hemisphaerica|type=transcript|length=1610bp
CgcaatttttttgttaattttttataactCTTAGACAGAGATTTGCATTT
TCATGATAGATTTTCTGCCAAAAATTCTTGTTGTTTGAGtgatatatttt
caattttttcatctcACAAAGTTCTCTCTCTCATCGTATTGAGCAGTTAT
GTCggtgaagaaagaagaaaacagcAGACATGAATTTGCCACTTTCCTAG
TTTCAACTCAGGATCGTGACGAAGGACTTGGACTTTGTACCTGGTTGTTG
ACACTAGCGGCCATGCTCCTTGTTATTTGTACTTTCCCAATATCACTGTT
CTTCTGTATTAAGATTGTACAAGAATATGAACGAGCTGTTATCTTCAGAC
TTGGTCGTTTGTTAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTCGTA
CTACCATGCATTGACACTTACATGAAGGTGGATCTCCGTGTCATTTCATT
TGATGTTCCTCCTCAAGAGATTCTAACCAAGGATAGTGTCACTGTCGCTG
TAGATGCTGTTGTCTATTTCAGAATCTCAAATCCAGTATGGTCTGTAGTC
AATGTTGAAGATGCTCACAGATCAACAAAATTGCTTGCACAGACAACATT
GAGAAATGAGCTTGGTACTAAAAACCTAAGTGATTTATTATTGCAACGTG
AAACTATTTCAGAATCGATTGCAAGGATTCTGGATGTGGCAACTGATCCG
TGGGGGATGAAAGTTGAACGTGTTGAAGTTAAGGATGTAAGATTACCACA
GCAATTACAACGTGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAGCAA
GAGCTAAGGTCATTGCCGCTGAAGGAGAGATGAATGCAGCGAAAGCTTTG
AAGGAAGCTGCCGAAGTCATCCAGGAATCACCACAAGCTTTACAACTCAG
ATATCTTCAAACCTTACAAACCATCTCAGCTGAAAAGAATTCAACCATCA
TTTTCCCACTACCGATTGACATGTTAAATAAAGCACTATCGTAAAGAGGA
AGAATCAAGAAAATTGTGATTTTGATTTACGTTAAAGCACTATCTTTATA
AGTTACTTGAATaactttggaaaaaaaacaacagactTTCGACAACTGAT
AAACAAAATATGGCGGAATGGAATTGTTTATGAACTCACAACTTCTAATG
AAAGCCTTCGATTGCAAAACGTGAAATCTATCGTCCATGACGtctttata
acgtttttatgACGTTAAAACAACTTCGTTTgtcgattttcaaattttca
gaacaaAACTGTAACATTTGGTCAAATGCTACCGCAACTTTATAATGCCA
GATAGTTAATTACGCTAAAAATATCACGCCAATAACCCCTATTACTTTAT
ATTTACTGTAGAAACATCATTTTCCCGTTACCGATTGACATTGTAAAATT
GTATAATAAAGAAATAGTTTTAGCATATTATTATATGAAAAGTGTAAGAT
TGAAggcataaaaattatttttaagagaAGGCACTATACATTAACAAAAT
CACGGTTCTAACTATAGTCGACTTCTAGACTGCTTAATACTGAATCGCAg
gccaaaatcatatattgacctgtgccgaccaatcgagattctattcagcg
cgcaatcaac Run BLAST on NCBI protein sequence of TCONS_00048820-protein >TCONS_00048820-protein ID=TCONS_00048820-protein|Name=TCONS_00048820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MSVKKEENSRHEFATFLVSTQDRDEGLGLCTWLLTLAAMLLVICTFPISL
FFCIKIVQEYERAVIFRLGRLLAGEAKGPGIFFVLPCIDTYMKVDLRVIS
FDVPPQEILTKDSVTVAVDAVVYFRISNPVWSVVNVEDAHRSTKLLAQTT
LRNELGTKNLSDLLLQRETISESIARILDVATDPWGMKVERVEVKDVRLP
QQLQRAMAAEAEASREARAKVIAAEGEMNAAKALKEAAEVIQESPQALQL
RYLQTLQTISAEKNSTIIFPLPIDMLNKALS Run BLAST on NCBI transcript from alignment at scaffold_147:37062..42466+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048820 ID=TCONS_00048820|Name=TCONS_00048820|organism=Clytia hemisphaerica|type=transcript|length=5405bp|location=Sequence derived from alignment at scaffold_147:37062..42466+ (Clytia hemisphaerica)
CgcaatttttttgttaattttttataactCTTAGACAGAGATTTGCATTT
TCATGATAGATTTTCTGCCAAAAATTCTTGTTGTTTGAGtgatatatttt
caattttttcatctcACAAAGTTCTCTCTCTCATCGTATTGAGCAGTTAT
GTCggtgaagaaagaagaaaacagcAGACATGAATTTGCCACTTTCCTAG
TTTCAACTCAGGgttagaaacttttttgaatcttgacatttttttagatt
tctaggACTAGGACAAAATACATATCGATTTTATCTCGCGAATGTTAAGA
ACACTTGAGCCAATTTTGCGGTCCTTTTTGACCAGCCTTAACTTCCACCA
TTATGGGAGTAACTTTCAATTTGCGCAACGTGTGTTGAATTTAAGGATAA
GAATTTAAAGATCaggagattcgaattataaatcATTTGTCGTCAGTCTG
CAAATAGAGATTTAATCATTATGTTGACGAATTTGatattcgaaatttat
tttctttaatttgtaTTGCTTACTCATTAAATCTTCTATAACACGAAATC
ATCCTATAACTTAAATCATTTTTTCTGGTTTCCTGCTAGaataattttac
attttcagCATTTCTTTTACTGGATTTCTCCTTAAATCGGATGACTTCTT
ATGCTACAGACCTGGTGGAACAACCATtgaaagtggggaggctgaaaatg
agataaaatttgctaggaatttgagagaaaacctcatttgctcaaaagtt
gggaggctgaagtctctcCAGTCTCCCTTCCACCGGGCCTGTGCTAGTTa
cagataccttatcggggaaagaaatgtcggagttttattcagttagggtt
ttttttttgcggTATAAAATTTTAGGTANCAAAATGAGATAAGatttgct
aggaatttgagagaaaacctcatttgctcaaaagttgggaggctgaagtc
tctcCAGTCTCCCTTCCACCGGGCCTGTGCTAGTTacagataccttatcg
gggaaagaaatgtcggagttttattcaGTTAGGGTTTTTTTTTGCGGTAT
AAAATTTTAggtaaatgttttggtcggTGATAAAAAATCGGGTCCAAGTT
TTGGTCAGGTGATAAGATGTCGGAAAATATTTCGTCGGCGAAAGATTTCG
TCAacacctcaaaattttcgtccctttcccccgacattttttttccCGAT
AAGGTACCACATTTCCTATAAAACAACGTTACCGtggttttaagattttt
aaggTTTAGGTGGGGTTTAGGTACGACATTGTTCAGAGAGCAGCTCTTAT
CAAAGAATGTGGAATGTCCTAACTAACGGTGCTCTTTTCAACGGTGCTCA
TTTGAGGGGGTGCTTAATAGAGGAAATACTTTAAGGTCCCGAATAAATGT
CCCCAGACCCCCTCATTCTTAAAGACCCTCTCCCGTTCTGAGCTGCTCAA
AATTGTCGGGTTTTAGTATATATTTACCTCATTTGGGGGATTTTAGAGGT
ACGATTTCAGAACCCCCGGCAATAAGTTCCTCCCAGTTTATTATACTATA
AAAATCGGACCCCTCATCTTTTATTCGGGGACTTAGATTACGCTAATCGA
TTCATAGACTATCATTTTCTTTAGATCGTGACGAAGGACTTGGACTTTGT
ACCTGGTTGTTGACACTAGCGGCCATGCTCCTTGTTATTTGTACTTTCCC
AATATCACTGTTCTTCTGTATTAAGGTAAGTCTTTTCATTAAATGCTGTG
TTTTTCTAAGGAGCTAAAGAAAATGACTTTCTTGGGTTTCAAGGTTGTGG
GAGTAATAGCATCGGCCCATTTTTCGAACGTGAGGGatatatttcaacaa
aaatttaaatggGGTTTTTGAAATTTGGTCCTTTGTCAAAGACGGAATTT
GGGCTGCTTTATTCCAAAAAGTTTCTAGGTTGGATTTTTGGAATTGTCAA
TAATTATatatataaaacaaatttttggtTACGGGGTGACAGAAACTAGG
GAAAAACTTATTTTGAGAGAAATGATTTCTCTTTGAGTCAGGTCCAGGAT
ATCCCGAATCTAGTACAACCCAACCGGAAAAAAATCTTCACAAATCTTTT
TGAATGACTTGTGATTAGAGCAACGAGTCTCTATCGATTAAGAGGAGAGC
TTGAATTATCCTTGATTTCTGAGTTAAGGTGTAAGCTTATGAGTCTAgtt
aatcaaattaataaactTTGTGAGGCAAAACTGTTTGATTTAACAGTCAG
TTGTTAATCATAAATTTCCTTAACATTtgtctaaattttcaaaaagaata
aGTCGTCAGTTGATAATTCTCGTaatcatgaaaattttccaatcctattt
tgatttttcaaaacgaCTATAATTCAATTtactaaatttttatttttcaa
atatttttttctttttcattttggaagaaaattgaaatttatatAATTGA
TTCACTCATAAAGAAACTCTGTGTAAAATAGTTTTGTTTTCCAGAGGACC
CAGCAAGAACAATCTTGCATAGACAACAGACCCCTAACTGATTTTTCATA
AGCCTTAGAATATTTTGTTGTCAGGAGAAGTTGCCCTTCAAATGCAATAG
ATTGAAGAAGAATTTCCCATCGTTCGTACGTCTGGGTCAAAACAGatctt
gaaaatttcattgaaaaatatactATTTATTGGAATTTTCCACCTGCAGt
cgtattttcaaaaaatgagatTTCTGAAAAAGTGTATTAAAATCCATATA
GCGCCGATTGTCTCGATTTTCTGTCAATCAAAATTATAGTTACCCCCCAC
CCTATCGTGAGCATCCCATTCTTGAACTATTTCTTTATAGTTAACCAAAA
TCTACTCTTTAGGTCATTCATGATCACTCATCTTTATATACCCTTTGAcc
ggaattttttttcgaaagtggCACCCTaatcacagatttataaagcccga
agggcacACTTTAAGGCatcacaggcaaaaaaattgaatatcgcaaaaaa
tattgttgctattgttttcaaaaacccgcgaagcttctgattggtcaagc
actgaaatttcattgtaatgtcacgtgacctaggtaggatttcctaccta
accacggcacacttttcagccaaatcgcgacatctaacccttcgggcttt
ataaatctatgaccTTAATCCACGTAGTAGAGAGCTACTACTTAATAGCG
GTGTAAATACATCGAGAGCGTTAGATGCACTTTTAATCGAATACTTTAGA
TGATGTAGctccgttagacgttaatttttgacACGGCagtggcttcttta
cgggtacaactttaaaaaaaactccgatcaaaaatGACGAGtatagcttt
gtccagggtCAGTGGTCGTAGTCATCCTATTTGAATGATAAAGGTCTTAT
GAAAGTAATatcaatggggatgaaatatcTTCCAATtgggcgaaatcata
gatttctGAATTTGcaagtattttatattttttcaaaacctaacCAATTA
AGTGTCACTTTGGAATCAGAAAGGGtttttgaagtcaatttttccatACA
TATAGCCTTTCCTAGATCTAAAATGCCTACAATTTTACGTGTATTTCCTC
ACACTACCTTGGTTGTTAAAAATGTATCATACCTTATTTTTTTCCTCTAA
GATTGTACAAGAATATGAACGAGCTGTTATCTTCAGACTTGGTCGTTTGT
TAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTCGTACTACCATGCATT
GACACTTACATGAAGGTGGATCTCCGTGTCATTTCATTTGATGTTCCTCC
TCAAGAGATTCTAACCAAGGATAGTGTCACTGTCGCTGTAGATGCTGTTG
TCTATTTCAGAATCTCAAATCCAGTATGGTCTGTAGTCAATGTTGAAGAT
GCTCACAGATCAACAAAATTGCTTGCACAGACAACATTGAGAAATGAGCT
TGGTACTAAAAACCTAAGTGATTTATTATTGCAACGTGAAACTATTTCAG
AATCGATTGCAAGGATTCTGGATGTGGCAACTGATCCGTGGGGGATGAAA
GTTGAACGTGTTGAAGTTAAGGATGTAAGATTACCACAGCAATTACAACG
TGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAGCAAGAGCTAAGGTAT
ATTCAAATCTTACGTCATCTTGTCTACGTAAATATCAGtctaaaaagtca
attttttcgccacacataccgtcagttggtaaatcCACTGCCCTCTGGAT
CTGTGGTAAGGGGTGTGCTTATCAAAAAGGAGGTAACAGGGACTTCAGTG
GACCTTTCAAACTGTCATAAACCACGAAAATAAGCAACTCCCAACGATTT
GTAGGGTTCTCGCTAATCGCTGCACATGGtattttgattaaaatattCAA
CATTGAAATCTTTGAATATGGATCTTTAAGTTTGAGTGGACTTAAGGACC
TCAAATGAAGTATTCCCGCTCAAATTCCTGCTATATTCTAATATCCCGCT
CAGCTCTTTAGCCATCTGGCTGTAGATCCCGTGAAATAAACTATCCAAAA
TTTTCAGATTACTTGACTAGTTAAATATAATATTGATTCAATCTATTTTC
CAGGTCATTGCCGCTGAAGGAGAGATGAATGCAGCGAAAGCTTTGAAGGA
AGCTGCCGAAGTCATCCAGGAATCACCACAAGCTTTACAACTCAGATATC
TTCAAACCTTACAAACCATCTCAGCTGAAAAGAATTCAACCATCATTTTC
CCACTACCGATTGACATGTTAAATAAAGCACTATCGTAAAGAGGAAGAAT
CAAGAAAATTGTGATTTTGATTTACGTTAAAGCACTATCTTTATAAGTTA
CTTGAATaactttggaaaaaaaacaacagactTTCGACAACTGATAAACA
AAATATGGCGGAATGGAATTGTTTATGAACTCACAACTTCTAATGAAAGC
CTTCGATTGCAAAACGTGAAATCTATCGTCCATGACGtctttataacgtt
tttatgACGTTAAAACAACTTCGTTTgtcgattttcaaattttcagaaca
aAACTGTAACATTTGGTCAAATGCTACCGCAACTTTATAATGCCAGATAG
TTAATTACGCTAAAAATATCACGCCAATAACCCCTATTACTTTATATTTA
CTGTAGAAACATCATTTTCCCGTTACCGATTGACATTGTAAAATTGTATA
ATAAAGAAATAGTTTTAGCATATTATTATATGAAAAGTGTAAGATTGAAg
gcataaaaattatttttaagagaAGGCACTATACATTAACAAAATCACGG
TTCTAACTATAGTCGACTTCTAGACTGCTTAATACTGAATCGCAggccaa
aatcatatattgacctgtgccgaccaatcgagattctattcagcgcgcaa
tcaac Coding sequence (CDS) from alignment at scaffold_147:37062..42466+ >TCONS_00048820 ID=TCONS_00048820|Name=TCONS_00048820|organism=Clytia hemisphaerica|type=CDS|length=3384bp|location=Sequence derived from alignment at scaffold_147:37062..42466+ (Clytia hemisphaerica)
ATGTCggtgaagaaagaagaaaacagcAGACATGAATTTGCCACTTTCCT
AGTTTCAACTCAGGATCGTGACGAAGGACTTGGACTTTGTACCTGGTTGT
TGACACTAGCGGCCATGCTCCTTGTTATTTGTACTTTCCCAATATCACTG
TTCTTCTGTATTAAGATTGTACAAGAATATGAACGAGCTGTTATCTTCAG
ACTTGGTCGTTTGTTAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTCG
TACTACCATGCATTGACACTTACATGAAGGTGGATCTCCGTGTCATTTCA
TTTGATGTTCCTCCTCAAGAGATTCTAACCAAGGATAGTGTCACTGTCGC
TGTAGATGCTGTTGTCTATTTCAGAATCTCAAATCCAGTATGGTCTGTAG
TCAATGTTGAAGATGCTCACAGATCAACAAAATTGCTTGCACAGACAACA
TTGAGAAATGAGCTTGGTACTAAAAACCTAAGTGATTTATTATTGCAACG
TGAAACTATTTCAGAATCGATTGCAAGGATTCTGGATGTGGCAACTGATC
CGTGGGGGATGAAAGTTGAACGTGTTGAAGTTAAGGATGTAAGATTACCA
CAGCAATTACAACGTGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAGC
AAGAGCTAAGGTCATTGCCGCTGAAGGAGAGATGAATGCAGCGAAAGCTT
TGAAGGAAGCTGCCGAAGTCATCCAGGAATCACCACAAGCTTTACAACTC
AGATATCTTCAAACCTTACAAACCATCTCAGCTGAAAAGAATTCAACCAT
CATTTTCCCACTACCGATTGACATGTTAAATAAAGCACTATCGTAAATGT
CggtgaagaaagaagaaaacagcAGACATGAATTTGCCACTTTCCTAGTT
TCAACTCAGGATCGTGACGAAGGACTTGGACTTTGTACCTGGTTGTTGAC
ACTAGCGGCCATGCTCCTTGTTATTTGTACTTTCCCAATATCACTGTTCT
TCTGTATTAAGATTGTACAAGAATATGAACGAGCTGTTATCTTCAGACTT
GGTCGTTTGTTAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTCGTACT
ACCATGCATTGACACTTACATGAAGGTGGATCTCCGTGTCATTTCATTTG
ATGTTCCTCCTCAAGAGATTCTAACCAAGGATAGTGTCACTGTCGCTGTA
GATGCTGTTGTCTATTTCAGAATCTCAAATCCAGTATGGTCTGTAGTCAA
TGTTGAAGATGCTCACAGATCAACAAAATTGCTTGCACAGACAACATTGA
GAAATGAGCTTGGTACTAAAAACCTAAGTGATTTATTATTGCAACGTGAA
ACTATTTCAGAATCGATTGCAAGGATTCTGGATGTGGCAACTGATCCGTG
GGGGATGAAAGTTGAACGTGTTGAAGTTAAGGATGTAAGATTACCACAGC
AATTACAACGTGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAGCAAGA
GCTAAGGTCATTGCCGCTGAAGGAGAGATGAATGCAGCGAAAGCTTTGAA
GGAAGCTGCCGAAGTCATCCAGGAATCACCACAAGCTTTACAACTCAGAT
ATCTTCAAACCTTACAAACCATCTCAGCTGAAAAGAATTCAACCATCATT
TTCCCACTACCGATTGACATGTTAAATAAAGCACTATCGTAAATGTCggt
gaagaaagaagaaaacagcAGACATGAATTTGCCACTTTCCTAGTTTCAA
CTCAGGATCGTGACGAAGGACTTGGACTTTGTACCTGGTTGTTGACACTA
GCGGCCATGCTCCTTGTTATTTGTACTTTCCCAATATCACTGTTCTTCTG
TATTAAGATTGTACAAGAATATGAACGAGCTGTTATCTTCAGACTTGGTC
GTTTGTTAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTCGTACTACCA
TGCATTGACACTTACATGAAGGTGGATCTCCGTGTCATTTCATTTGATGT
TCCTCCTCAAGAGATTCTAACCAAGGATAGTGTCACTGTCGCTGTAGATG
CTGTTGTCTATTTCAGAATCTCAAATCCAGTATGGTCTGTAGTCAATGTT
GAAGATGCTCACAGATCAACAAAATTGCTTGCACAGACAACATTGAGAAA
TGAGCTTGGTACTAAAAACCTAAGTGATTTATTATTGCAACGTGAAACTA
TTTCAGAATCGATTGCAAGGATTCTGGATGTGGCAACTGATCCGTGGGGG
ATGAAAGTTGAACGTGTTGAAGTTAAGGATGTAAGATTACCACAGCAATT
ACAACGTGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAGCAAGAGCTA
AGGTCATTGCCGCTGAAGGAGAGATGAATGCAGCGAAAGCTTTGAAGGAA
GCTGCCGAAGTCATCCAGGAATCACCACAAGCTTTACAACTCAGATATCT
TCAAACCTTACAAACCATCTCAGCTGAAAAGAATTCAACCATCATTTTCC
CACTACCGATTGACATGTTAAATAAAGCACTATCGTAAATGTCggtgaag
aaagaagaaaacagcAGACATGAATTTGCCACTTTCCTAGTTTCAACTCA
GGATCGTGACGAAGGACTTGGACTTTGTACCTGGTTGTTGACACTAGCGG
CCATGCTCCTTGTTATTTGTACTTTCCCAATATCACTGTTCTTCTGTATT
AAGATTGTACAAGAATATGAACGAGCTGTTATCTTCAGACTTGGTCGTTT
GTTAGCTGGTGAAGCCAAAGGCCCTGGTATCTTTTTCGTACTACCATGCA
TTGACACTTACATGAAGGTGGATCTCCGTGTCATTTCATTTGATGTTCCT
CCTCAAGAGATTCTAACCAAGGATAGTGTCACTGTCGCTGTAGATGCTGT
TGTCTATTTCAGAATCTCAAATCCAGTATGGTCTGTAGTCAATGTTGAAG
ATGCTCACAGATCAACAAAATTGCTTGCACAGACAACATTGAGAAATGAG
CTTGGTACTAAAAACCTAAGTGATTTATTATTGCAACGTGAAACTATTTC
AGAATCGATTGCAAGGATTCTGGATGTGGCAACTGATCCGTGGGGGATGA
AAGTTGAACGTGTTGAAGTTAAGGATGTAAGATTACCACAGCAATTACAA
CGTGCCATGGCTGCTGAAGCTGAAGCGTCAAGAGAAGCAAGAGCTAAGGT
CATTGCCGCTGAAGGAGAGATGAATGCAGCGAAAGCTTTGAAGGAAGCTG
CCGAAGTCATCCAGGAATCACCACAAGCTTTACAACTCAGATATCTTCAA
ACCTTACAAACCATCTCAGCTGAAAAGAATTCAACCATCATTTTCCCACT
ACCGATTGACATGTTAAATAAAGCACTATCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048820-exon-scaffold_147-1491911889:37062..37273 | TCONS_00048820-exon-scaffold_147-1491911889:37062..37273 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1510915933:37062..37273 | TCONS_00048820-exon-scaffold_147-1510915933:37062..37273 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1575043694:37062..37273 | TCONS_00048820-exon-scaffold_147-1575043694:37062..37273 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1491911889:38686..38786 | TCONS_00048820-exon-scaffold_147-1491911889:38686..38786 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1510915933:38686..38786 | TCONS_00048820-exon-scaffold_147-1510915933:38686..38786 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1575043694:38686..38786 | TCONS_00048820-exon-scaffold_147-1575043694:38686..38786 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1491911889:40713..41207 | TCONS_00048820-exon-scaffold_147-1491911889:40713..41207 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1510915933:40713..41207 | TCONS_00048820-exon-scaffold_147-1510915933:40713..41207 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1575043694:40713..41207 | TCONS_00048820-exon-scaffold_147-1575043694:40713..41207 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1491911889:41665..42466 | TCONS_00048820-exon-scaffold_147-1491911889:41665..42466 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1510915933:41665..42466 | TCONS_00048820-exon-scaffold_147-1510915933:41665..42466 | Clytia hemisphaerica | exon |
| TCONS_00048820-exon-scaffold_147-1575043694:41665..42466 | TCONS_00048820-exon-scaffold_147-1575043694:41665..42466 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_147 | supercontig | scaffold_147:37062..42466 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
Blast
BLAST of TCONS_00048820 vs. Swiss-Prot (Human)
Match: STOM (Erythrocyte band 7 integral membrane protein OS=Homo sapiens GN=STOM PE=1 SV=3) HSP 1 Score: 339.732 bits (870), Expect = 1.832e-112 Identity = 175/252 (69.44%), Postives = 213/252 (84.52%), Query Frame = 2
Query: 221 EGLGLCTWLLTLAAMLLVICTFPISLFFCIKIVQEYERAVIFRLGRLLAGEAKGPGIFFVLPCIDTYMKVDLRVISFDVPPQEILTKDSVTVAVDAVVYFRISNPVWSVVNVEDAHRSTKLLAQTTLRNELGTKNLSDLLLQRETISESIARILDVATDPWGMKVERVEVKDVRLPQQLQXXXXXXXXXXXXXXXKVIAAEGEMNAAKALKEAAEVIQESPQALQLRYLQTLQTISAEKNSTIIFPLPIDML 976
+GLG C W+L + L + TFPIS++ CIKI++EYERA+IFRLGR+L G AKGPG+FF+LPC D+++KVD+R ISFD+PPQEILTKDSVT++VD VVY+R+ N +V N+ +A +T+LLAQTTLRN LGTKNLS +L RE I+ ++ LD ATD WG+KVERVE+KDV+LP QLQRAMAAEAEASREARAKVIAAEGEMNA++ALKEA+ VI ESP ALQLRYLQTL TI+AEKNSTI+FPLPIDML
Sbjct: 25 KGLGPCGWILVAFSFLFTVITFPISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDML 276
The following BLAST results are available for this feature:
|
