TCONS_00048853 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048853
Unique NameTCONS_00048853
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length526

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048853 ID=TCONS_00048853|Name=TCONS_00048853|organism=Clytia hemisphaerica|type=transcript|length=526bp
AAGTCTGGAATCCTTGAAAGATTTACAAATTTTCTTGCCGAAAATTTTTA
CCGCTTTGCTTGTGTTTTTGGTGGACATTTTAAAAGAAGAGACATGAAAA
TTGTAAATCCTTAAAACCTGTTATTGGATTTTCGTCATTCACATAATAAC
ACTCAgCACCAATGCGAATTGTGATCTCGATCTTGGTTTCATTATCGATG
AATCTGGCTCCATCACCAGtacagatttcaaaaaatccatcGACTTCGTC
AAATCAGTAACACAACAATTTAACGTTGATACATACAAGACTAGAGTATC
AATTATAACTTTCTCAAATGATGCTGTTCAACATTTTGCATTCCGAGATT
GGTATGGATACAGTCGACAAGGCTTGGATTATTATCTACCACGAATCCGC
CAACGAGGTGGGGGAACGTACACGAACAAAGCGTTGGATTTGGCACGAAC
CAAAATGTACACCCTGAATAGCGGTGAACGACACGATAAAGTCAACGTCC
TTGTGGTGATTTCAGACGGAAAGAGC
Run BLAST on NCBI

transcript from alignment at scaffold_147:157841..176838-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048853 ID=TCONS_00048853|Name=TCONS_00048853|organism=Clytia hemisphaerica|type=transcript|length=18998bp|location=Sequence derived from alignment at scaffold_147:157841..176838- (Clytia hemisphaerica)
AAGTCTGGAATCCTTGAAAGATTTACAAATTTTCTTGCCGAAAATTTTTA
CCGTAAGTTTGTATATACTATTTAGACCTTAGTTGTAGTGGCTCGGTTTG
TATTGTTGACCAACGGGGTTAGTTGGTGGAAGCCAATTTCTCGATTCTTG
GACGTCCATATCTCTTTTAGGTCAAAAGGAACAGTACCATGCTATTAGTC
AATCTGGTCCAATTTTTTATCGACACTTGTTTTAATTTGAGAGATTAAAG
TAAAAGATCGGTTATCATGATTTACTGTAGATTTAGTTTGATTTATAGAG
GTGTTTTTAAAGTTACGTGATTTCCGCCATTATGGAAACAAACGTTCGAT
TTACGTTATTACGAATCGCCTCTACAGATTCGAACGTTTGCTTCCATAAT
GACGTAAAACCTCTATTAAGTAGTATTTGGAACCACTCTTTTTATTACTT
TAAAACAGGGGATTTTTGCAAAGGTTAAAGTAAACCCGAATTGAAAACTA
TCTAAACCCTCGACACATTATCAAAGTTTTGATACGAATGTTGTTTGGAT
ACAAGATACATCAACTCAAGAGCTATAAATTGTTAATTTGCTTTATTTTT
TTGCAGGCTTTGCTTGTGTTTTTGGTGGACATTTTAAAAGAAGAGACATG
AAAATTGTAAATCCTTAAAACCTGTTATTGGATTTTCGTCATTCACATAA
TAACACTCAGGTAAATAAAATATTTTTCTTAAAGTTCCTTCTATTCAAAA
AGATGACATTTTCTATTCGCTTAAAAGTATTTTCAAAGAACGTAGCATGA
GAGGGAAGAGCATCCGGCTAACGACGGGCAAGGTTTTGGGGATGGGCTCA
AAATGGTACTTGATGGTTCTCTGATTGATATTCGGTCATTAAAAACCGGG
CTTCATTTTTTCCCGGACACAATTTAATGAGAACTATTTTTGTGGGATTG
CGAACGCAGGGATAAAAAGGCCATTTTACGGTCGAAGAGAATCAGTGGCG
TTCGGCGTTTTGATTACCAATTTCTGTTGGTCTAAAATTTTGGATGTTTT
TACATCTAACCAATGGAAATCCGCTATAAGGGCAAAATCAGTTCGGCTTA
CCCATAATTCATTTCAAACGTGAAACGGCTTGTTCACTGTAATAAGTTTG
TAGGATCTCAATTTTCGTACTCCATTTCGAAATTTCGGTAGAAACTTGGT
GTGCTATACAGACTACTTTTTCGCAGGGATTAAATTTCGCAGTTGAGTTT
ATCCGCGAAATTTTAACATTTCGCGGGAACTTTAATTTCGCGGATGCCAC
TATTGCGTGACAATATTTTCACGATTTTGTGTCTTTTACTGTCAAATCAT
GCATGTTGGTTATAATGCCTCAGTAAACATTCAAAAAGTATTTATTTGAT
ATTTTTTGAGTTTTGTTTAGAAAGATTTCGTGGATAAGGCGTTTTTCCAA
ATTTCCATTGGGATTAAATTTCGCAGATGACATCAAAATCCGCGAAATCG
TTCCATTTTCTTTAAAGTCAAAGCAAAAGAAACTGAGGTTTAATCTTTAT
GTATATTATTGACGTTTGTGATTTTGGTGCAAAAGTTTTACTTTAGTTAA
TCACCACCTTCAAAGGCCCATTGTGATCGTGGTGAAAAAGATGTGCCAAC
CTCGACAGATTCTCATACGAAGCCATGGCCTTTAGAATGAAAACGTGCTA
AGATTATCTGAATCTGCTCAAAGATTAATTTTTGACAAAGATTATGAAAT
CATTTTTCGACACTGGTTCATTGATAATTAAAGTTATAATCGATTAAATT
AAAAATACAGTTTTAACAAGATTTAAAACTATTAATCGTAACCCGTGAAT
GGGATAAAAATATTTTTAAGCCGTTAAACATTTTTGAGCTCTAGCATTCA
CTTTTTAGAACGAAAGGAAGTATTTAGCACTGGTTTAGCACTATTATATC
ATATAATGATTTATAGATGATGCAGTGTCAAAGTTTCGATAGTACAGGAT
AAAGCTTTGAAAAAAATAATTATAATCGCAATTCGTGTTTAGAGATTTGG
ATAAAGAGCAGTGAACCAGACTGAATGAAAAGGGTTTCTACGTGAGATAA
TCGAAATTTTCCAATACTTAAAACTTTTCTACCTTAATAGGTTGGCTAAA
TTTTCTCATTCCCAGGGTAACATTCCCGGGGCATTTCCGGTATCGTTTTA
CGGCTTTTCTTTCGGACATACCGGCCGAAATGCTGCGTATAGATGCGTAA
ACAACACACAACGGCCTTGAGAACATAGTCCGTATAAAAAACTCTGATTT
GGAAGCTTATTGTTTTAACTTTTTGTTACTTTTTCCTTTTGTTAATATCA
AAAGATGAAAATCGATTTGCTCAGTTTTTAATCACGTTACCAAGTATTCC
TCTTGGGATTGGTTTAAGATTTAATCACATGATCAAAAAGCGAGCAAAAC
AAACTTATTTCTCAAACGCAAGTTTAAGTAGGAAACAATGGAAAGAAACC
AAAGGCTTCCAGAGCGGGGTTTTTTATACGGACTATGTTGAGACTTGCCA
CTTTACAATTTGTACTTTTGTACCTACCCAGGTTGTTGGCCGTTGTAAAA
TGGTAATAAGGAAAGTTTTCCCGGGAATGAAAAAGTTTAGCAATTCTACG
TGACTTCGTTTCTTTGCTTCTACGTGAGTAGCTTTGGGTCGCTGACATCT
ATTTTCAAACATAACCATAATTAAATTTTGTGGCCTATATTAAAATATTT
TTTCAACACAATACAATAAAACTGTTTTTTTATAACTTACTTTGGTTTTA
ATACTCACATTGCTTTTGTAATGAATGTATAATGATACTTTATTGAGGGG
AAAGAATTGTAATAATTTCTTTAGATAAAAATAATATACATTGGGAGATC
TCATGCAGATTAATCGTTAAAAAAATACATAGTGAAATTTCCTCGCTAAA
TAGCACTAGCGCTGTGCTTTTTTGTAAAAATCTGAAAAAAATTAATAATT
GGCAGGATCAGTTGATTAATTTTGTTGTGTTTTTTTAATGTTTTTGACCT
GCCATTCTCTAATAGAAATGCTTAGATTGTGAAATTTTTTTAAAAAGCTC
TGATAGAATTTTGTGTATCATATTGTGTTTTGATCTGTTGTATCTTTTTG
ACTTATTATATCTTTGGATTTAATTAGAATTTCTAGCACTTTCTTTTAAA
AGCAGTGCAACTTCCTGGGTTTTACATAGGCGTAGCGAGATACCCTGCAA
GATTTATGGATGAGAGCGGTTTTTACGACACTGTAATTATTGTCTTTGTT
TTATCAAAAGATCATGAATTTGTCATAAACGTCTGCACTCCTTCATAAAT
TTTGCAGGGTATCTCGCTACGCCTATGGTTATTTTCTCAAAAGTATGGAA
GGGCTAATGAAATCAAAGAAATTCTCATTTCATAGATAGATGATGATAAT
AATATGTTTAAATTTTACCTACTTTAATGAGTTTACCATTGCTTTAAATC
GACAGTATCAATTACTGGTTTTTTTTACAAGATACAATAAACTTTTGTTG
AGCCTCGGGAGGGCTTTTTAATTCAGTTTTAACTTTAGAGCAAAATTGAG
GTATTTTCACCCTTCAGGGCATTTGAATTTTGCCATTCCTGGCTTTTCTC
GGTCAAATTTGACAAGTGCTANTCATTTGATTTTTGCCATTCCTGGCTTT
TCTCGGTCAAATTTGACAAGTGCTATGATCATTTTGACCAGTGGTAGATA
TATAGATAAACAAAGATGATTAGAAAAATTTTGGCTCGGCCACCTGCCTA
GTTGATATTTTACAGACTAGGATTTAAACTTGAGTTTAAATCAATTTAGT
CACGTGAGCGGTTGGTATTTTACGGATCTTGTAATCAATACCTAACACTT
GTCAAAGTTTAAAGTCAATAGCATTAGATGCAGTACCCTAGAACAGATTT
AGGCAAAAGGGGCAATTTTAGGCGGGTCTGTAAAATACACGCTACAGGTG
GTAGAAAATTGATCCTATGCACCCCAAAAAATAAATGTCACGTTGAGTCG
TTCTTAAAATTTGAGGGGAAAAAATGAGGTGAAAAAGAAATAATTGGTGC
ACACTTGCAAAATTTCACGTTATTTGGATAAATATTTCAAAAAAAATTTT
CAGTTACATTTTCACCGCTAATTTTATTATGGAGTCAAAATGTTATCGCG
GCTAGAAAAAGGTCTGTGTTCAAACGGTATGCATTCAGCCCTGGTGTTGG
CTATATATCGAAATCCCTATAATCGACTTTGTGTCAGGGTGTGGGAGATG
TGTTTAACTGAATTCGAATAACCAACACTGTTAGCTCCCTTCGTCTTTGC
AGAGTTTTAATTGGCTTTTGAATTAGGTAAAAATGTCGAATCTGTCTCCT
TGTACATATTATATTATCATTATCTAATTCTTACCATGTACTCAAGCTCT
TTCGAATTTTTGTTTTATAATCAGTAATTTTTCTCTTAGACACTTTTTCT
GTTCATCCCTCGCCCTCGAATTCTGAAAATATTTTAATACTTTTTTTCAG
GCCTCCACATATATTTTAATATATTAGTTATTTTTTCACACTCCCGTTTT
TAAAAACAAATAAACCAGCTGCGCTGGAAGCTCCGGCTTAAGAGATTAAA
AGATGTGAAAGATGAGCTTGTTGAGTTAGTTGTGTCAGAACGTTGCNAAC
ACTGTGAAAATTTCTCCGATCTTGTTCAAATTTACACAGGAATTGTGTTT
TAGTATCCTTTACTGAATTCTCATAGTGATATGTTTGTAAAAAATCTGTC
TCAGGTTTGAAAAATAAAAAGGAACGGTCGACAGCCGCAATGAAATTACG
ACAAAGTCCAAAAACGATCATTTTCAGCCATNTAATCTTAACAAATAAAT
AAACCAGCTGGAAGTTTAGCTCTTCTAAGTGATTACACATGCACTTTCTT
GCCTAAAGAACCAACCCCACCCCCGCCCACTCATTCATGACTAAAAAGTT
CAAAATTGGATCTAAAGGAGATAAACATTTAGAAGTGAATATTTCCAAGT
TCTTGATAAATTTTTTTTTTCTAAACTTGCCAATAGCGAAGCCATGATAC
GCCGTTGATCTGCGTTGATTTGATTGTCCGGATAAAATTTTGGGGAGAAA
AATAGNNNNNNTACGACAAAGTCCAAAAACGATCATTTTCAGCCATAACA
CTGTGAAAATTTCTCCAATCTTGTTCAAATTTTCACAGGAATTGTGTTTT
AGTATCCTTTACTGAACTATCATAGTGATATGTTTGTAAAAAATCTGTGT
CGGGTATGAAAAATCGCAAGCCGCGATGAAATTATTGAAATTACGAGACA
AAGTCCAAAAACGATCATTTTCAGCCATAATACTGTGAAAATTTCTCCAT
TCTTGTTCAAATTTTCACAGGAATTGTGTTTCAGTATCCTTTACTGAATT
CTCATACTGTAGTGATACGTTTGTAAAAAATCTGTGTCGGGTTTGAAGAA
TCAAAACAAAAGGAACGGTCAACAATGCAAAACAGGATCATTTTCAGCCA
TAAACATAACACCACAAAAACTACTCAGATCGTTTTCAAATTCAGAGTTT
GATGGTTTTGTTTAGCCATATATGCAAGATTTAAGCACTCGATCAGCTGA
CGATTCATAGCCAAAATTTCTCCAAAGTCTTTCCACATTGTTAGAGAGCC
AATATGCATCAAACTTCTCATAAATCATGTCCAAAACATTATGAATAATG
ATGAAAATGATCAATTTTTCACTGAGATTTGCCAGTATTTGCTACACAGT
CAGCTAGTCCACTTTCGGCAGCCATCTTTTTCTTAAATACTTTCGGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCAAATCGGAATAGATCATCGGATTAGA
TAAACAAACAAAAAATGTCTTGACCGTCGTCGGACGAGAGAGAATTTAAG
GCTCCTAGGCCGGAGCAAAAAGAAGAAAAAGATCATTTCAGATTTTCGAT
ATGGGGTAAAATTAATTGCTAGTCAATCCAACAAAGTTTCTATGAAGGTT
CATGGAAAAAATATCTTCACCTTTTTTTGTTTAAATCTCTTTTCTTTCTG
TGGTGACAATATGATATTGGGGAAGGAGGGAATTAGTTTGTTTTCATTAG
GCTTGAGAGATCTTTTAGTATGGCCCTCTTTTTTCGCCATATGGTTATGC
AAATTCGCGATCAAATTTTTGGCTGTTTCTTTCGAATTATAATTCTTTGT
AGATTTGGAGATTTGGTTTACGTGACTTTTTTGACGTTTTTGTTGGTTGG
ACCAGCAGGGAAACACTTTGTTTTCATTAGGTGAACATAAAAAACACAGT
TGTGTATGCACAGTTGTGTGTTTTTTATGTTCACCTATAATTTTTGACAC
AAATATACATTGACTTTTACGTTCACTTTGTTTTCATTAGATAGGCTGCA
ACTTTTAGTACACGTTTTTTTTTTAATTAATAAGAACATCCAAAATTTTT
GAAGCCTTCAGATGTTCTTAACTTTTCGGCTTTCAAGCCTAAAAATGTTT
TTAAAATGTTCTTATTTTCGCCATTTTTGGAGTCTTTTTTGTCCATTTTC
TAAAGAAATTGGGCCTTTTAGAGTCCACAAAGCCTTAAAATGTTCTTAAC
TTGTTCTTAACATTTTAGCCATCGAAGCCTTATGCTCTTATATAGTTTGT
TCTTATATATAAAAAACAACGTGTATGACCCATCTCTTTGGTTTATAAAT
ATTTGTGCTCAATTTTGCGCTCGTTATTCAGTTTCTCACAAATTCTTTGC
AGTTTTGAAGATTTTGGACTTTGCGACACGACAGTTGTTTTTTGCTTTGT
TTTTGCTAGACCAGTAAATGACGAATTTACTTTGTCGAATTCTGGAATCT
AGTTTTGTCAATCCTTTGCAATGTCGGTTATTGATTACCAAGAATATTAG
CCCTCCAGGACAGGTAAAAATATTCAGACCGATGAACAATAAATCTTTCT
TTTTTTGTTAGCCGGTCACCATTCTGGGAGTATTTTTGTCATTTCCCTAA
GAAAATAGATGTTTTAGGGTCCGCAAAGCCTTAAAATGTTCTTAACTTGT
TCTTATCATTTTGGCCATCGAAGCCTTATGTTCTTATATAGTTTGTTCTT
AAAAAAAAAGATGGTTACTGATATATGCAAGTGAAAACTTGGTAAAATGA
GGGAACATATTTTGGCGAGAATGAATTTTTTATGCTAAAAAAACTGCGGT
AGTGGTAAGGGTTTGGGTGTGTTTTACCAATAATTTAGCTATTTTTTAAA
ATACTGCGGGGTGGATTTCTAAAGCTTAAAAGAATTGGAAAGTTTAGGAT
GTTTTAGTGACTCTGAGAAAACTTAAGGAAATTGCTGATTTAAGAAAAAT
AAACTAGGATGTAGATAGCCTGGATAAGATAAGCTGTGAATTATATTTTG
ATATTTTTTCTATTTACTGGTCTTGCTCTACTTAGATGCTTGTAAACCCT
AGGTATGAAATTTTTAGCTTTGCGTCATAATTGAATTGACAGTGTACGCA
TGCGTTAGCCTTCTGCGGTATTGGAATACAAATCACTTTAGAAAGACCAG
GTGTTAAACAAGAAACATCTCGAATAAAAAATAATTTAAAGCTCGATACT
TATAAGGTTAGAAGAATGTAGGCTAAAAGGTACTATAGTCTAAAAGGTAC
TATAGTCAAAGATTTCATGACTTGATAAAATTAGTTTTGTCTTTGTAACT
ACCATACTGTTGCATTGAAAGTAATTATTCCAAGGCACGATTTTCTTACT
CTCCATTTTAACTACACTGTTTATATTATTTTGCTTCGCACTCTTCTAGC
CCGGAGTCCACATAAAGCTTTTTTATAGACTGGATGGCGGGATTAAGTGG
CCCGGTAGTATATGGTAATATGCTTTTGCTTCAGAATTTCGTTGTTTTTG
CCAGGTGAAAAGAATGAAGCAATGTTTTTATTTGAAAATAAGGGATTCAA
AATCTGTTAATAATGTTTGTTTCTCATTCTTAATTATATTTTTAAACTTC
AAGTAGCTTTTTTTGTTATTTCGTAAAATGTTCCTAGTCTACTTCACTCG
AGTCAGCGTCATCAAAAATTATTAGAAAGCAAAATTCAGCCAGAAGTAGA
CTCTAGTATAGTAATTATCAGGCTTAAACGTTCTTGAAATGTTCATAATA
TGCTGACTTTATTTATCTATTGACTTTAAAAAGTGGCTTAAAATCAGTAT
TTCCTTAACAATTTCAGAAATATCTGGCTTAGATTGTTCTTAATTTTTTT
TTTGGTTGGGGGGGGGGGGGGCTTTTTATAGTACGGCAGAAATCGACCGT
TTTTACTTCGGTAGGAAGTCTATAAATACTTTTCGGTATTGTGGAATCCT
AAAATCAGTTTGGTATCGGACATAGATGTTTACGTCGAAATCTCAGTGTA
ATGACGAGATTGCTAAATTTGAGTATTTGCAAAGTGGTTAAAAAAACATC
GTTATTGAAACAATTTTACCCTGAATGTCTAAACCATTCGCTACAAGAGA
TCTCGGTATTTAGGAAATCAGAACCCTCATCCATCCCTTTATGTTTCTGC
CAAAATTGAGCCTCGTTGTTCTAATAAGAATTGTCTATATATAACTTTTT
TTTCATCTAAACATTTCAGTATGTCAAATAATCATACACAATATGGATAC
TGTCAGAATCTTAAAATTCATCTCACTCCTGATCATACAACTAATCGCAG
TATTTGGTAATTGCCTTATGATCATCGTTGGTTTCAAATGCAAATCATTA
CGTAATTTTCAAAATGCTTTCATATTCAATATGGCGTTTGCTGATTTCCT
TCAAGGCGCTCTAATCATGACGTCAGCATTAATTAACATATATTACGGTC
ATTGGGCAAAAGGTTATACTGCATGTGAGATTTTTGGAATCTTAAAAGTG
ACGCTAACTTTATCTTCAGTGTATTCACTATCTGGTACTAGTATTTTACG
GTATTTCTATGTCGTCAAACGCACCAAAAGAATGAATACAATAAAGAAAG
CAGCTACCTGTATCGTTGCTTCATGGTTGATATGCATTTTCCTGGCAATG
ACTCCATTATTCAATTGGGGCATCTTAGGGTACGAAGACGGTAAAGAAGT
CTGTACTGTTTTATTTCATTTAACGACTTCACATACTCTGGTTGTTTTTA
TTACTGGATTATTCTTAAATGTGATTATAATGGTTGTATGTTATTTTTTC
ATCTTTTTAACGTTACATCGAACTAATAAACGTATGGGAGTCAATAGCAC
TGTATCGGCTATCAGTAAAAATGTAGGTGTCGTTGCAAGCCCTACTGGGT
CCACAATCAGCTCCATTGAGTTAGTAGCTAATGAACACGCCCTGATAAAC
AGCCCACCGCTAAATGGCTCGAAATCAGATATGAAGAGATACGATCAAAA
ATACAATGATTATAAAACATGTGTCGGTTCCGTGATACAAAATGATAAAA
CTCAGGCACAACAAATACCGCCGAAGTCTTTAATAACCCGAGAGAATTCG
GTACCAATAGATAATACTCGGAATAATTCAGCACCAGGTCATAAACGAGC
GCGTCGGGCGTCATCTTTCCAGAACATCCCACCGACAGAGATGAATTTAT
TGAAAACAGTTGTCACTATTGTGGTTGTCTTTATATGTTGTTGGACGCCG
TATGTATTGTTTAATATGATTCGGATGTTTGGTAGTTCCGATGATAACAA
TATAGCGGACACCATTACTATGTGGCTTGGTTTTATTAACAGTGCTGTGA
ATCCTGTCATTTATGGAGTGATGAATAAACAGTTCCGGAATGCGATGAAA
GAAATCCTGTGCCTACGGAAAAGATCCTCTGTTTATTCGCCACGATAATT
GGCCAGTACCAGATTTTCTTGCGCAATAAAAATTGGTGTATGCAGTTGGT
GTTTGGTCTGATACAAGCTTACTACTGCGTGATCTTTATATTAAATGGAT
TTGTATATTTTGGTGTCTATACAGGGGGGGGCACACAGTTACTACAAGAC
ATGATGTGTAGTAAGTGCTTTTTCAACACTTTCTTTCAGGACCACCACCC
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCC
CTGGTCTATACCGAATCTTTTCTTTATATTTTATATCAAGGATTTTCATG
TATTTATTTTTAAAGAATTATTTTTGTAATACTCGTAAAAATGATATAAT
TTTTTTTAGATATACCATTTCATTAACCCGATTTAGATTAATATTATTAC
TAATTAATTTCAGTTAATTTGACCCATTTGTGATGCCAGGACCACTCCAA
AGAGAATTCGATTGTATTGGTCCAACTTTTTCTGAGGTCTGATGGACGTC
AAATATAAAGTTTTTATCAAGTCAATATAACGGCATAATGATTTGGTGAC
AAGACCTATAATTATAAAAAAGCGTGTAAAATCGTAAATTCACTAAATTT
TGAAAGTTTCTTATCTGACAGGGTAGATTTTTTGGCCATTCCGGCTACCA
CTTTTCAGGGTACGGAAAATTTTTGAAATTTTGCATTTGGCAGAGCTTTA
GGTTTTGCGTCTGCTAAGATCTAAGTTTTGTCGGGAATTTGTTTCTGATA
GGGTCCATTTTTCCAAAATCCATTGAATCATCCCCGTGGGCTGCCAAGGA
CATTACCCCCCTGGACCATCATACTAAATGATTTAGGAGTGCAGTAGCGC
TATTAAAAGATTGCCATAATCCCAGGGTAACTGATGAGGTTGTTAGATTT
TTTTTGTTAAAACCTTTGCCATACACCTTGGAAAATGTTTATTAAATTAC
TATATGTTGGCAAACTTGAAATCTTTTACATCCAGATAAAATTTCAAGAG
GATTTCTTTTCATTTCGACCGCGCAACCCACATTTTTGAACCATTTCAAA
ATAATTAAGAAATTCCATGAATTTGTAGGTCTGTGTCAAAAGACATAGAT
TATTATCCTCTATAATCAAAAATTTGAACCCAAACAAACTCCAAACAACA
ATACTAATAAAACAAAAGAAAAAATCCCTTTTTATTGACTCAGCTGCAAT
TTGAAAAATTAATTTTCGATAAGATATGAAAAAATCATGGATTGAAAATG
ATTAAACTTTTGATGTGTAAGAACAAATTACATTTACATTTTTTATAAGA
ATCATTTTAAATAAATGAGTCACTAATTTGATCCTTATAATCCTTGTGGT
CCCTCAAATACTGTAGTCCATTAAGGGATGTCACGAACTACTGGCAAACG
ACACGACTCGCCCCTGATATGGTTAGGATTTTCTTCTTTTGACCGCCACA
CCATTTAAATGGTTAAGAAAAACGAGAGAAAAACGAAATATCGTAACAGA
ACACCTATTCTCTGTGCACACAATGCTCTGCGCTAAAGATAAGTGTAATG
TCCGGATCTGGTTATCCTATCGAGTCGTAACAATCAAAACCGTGTAGCCA
TTTGGCCAAAAAACAGAAGCGACTGGATTTACTGTTTATGCTTATGATAG
ACGCTTGATCAAAATCATCAAACCATAATGAGCCCCCCCTCCCTCTCATA
TAAAAAGTTCATACATTATGGAGAGGGTTCGAGCCCATTTTCACATTTCC
CACTGGGGGGCTTCGCATAATCATAAATCAAAATCTCACGGTGGTACACA
AATCTCCAGTTTTGCAAGAAGACTTGAAAGTCTCCANTGCGTGAATGGGC
ATTTTCGGTTACGTGAATACGTGAAAATTGGAAAATAATCCACTTAATTG
CGTGGATCTGGGCTATTATGTGGTTGAAAACGTGTATTTTCTCTTTTTTC
CACTGATAATGTGCAGGATTTTTCCGGATTTCAAATAATTATTTCCTCGA
TTTTCTGAAAAATCGAGTTTGCGTGAAACTTTAGAAAAATTTGCGTGAAT
GCGTGAAATGAGGGTCACATCATTGGCATATCCTCTTACGAAGGCACGAC
CTTTAGAATGAGTACGTCCCATGCGCGGAGTAATTGGAATCTGCTCGAAG
ATCAAATTATCTCAGTTGACCTTAGCAAGTAATGGTCCTGTAGTACTCAT
CGCTAGTTGTTTAAAAGACGTGTCCATATAAAAAGTTCATACATTATGAA
GAGGCTTCGAGCCCTTTTTCACATTTTCCAGGGGGCTTCGCATAATCATA
AATCAAAATCTCATGGTGGTGCACAAATCTCCAGTTTTGCAAGAATACTT
GAAAGTCTCCAGTTAGTAAGTTTTACGGGGTTGTTTCAATAACTGACTTT
TTTTCAGGATTTGACCAAGTTGAGTATACAGATCCACAAGGGGAACGTGA
TCTGACTTCGAATAAACAAAACATTTTAATATTTGAGAGGGGGTGTTTCT
AAAGAATCCTACATTTACTAAAAATAGCCAAAAAGAACGACAAAGTTCCT
AAAAAACAACAAATTTCGCCGTCCACAACCCCGACCCGGTTAGTTTGTCT
ACCCTTACGAGTTCATTCCATTTTGTTTATCACGGGAGTTAACTACATAT
GGTTAAAAGAACCACAAATTACGCATGCGTCTTACAATGCAGGAGGAACA
GCGGAACAGCTCTCTATCTACTAAACGGGACTCTACTCTATATTGCTTAT
GGTTGACAAATGTTTGCGACATGTATCCATCCTTCTAAAGTTTCCCTAAA
AACATTATTTACTAATTCTTATAAAAAAATCCAATAAAACTGTACCTTTT
TTCAATTCACCTGTTTTCATTCTTCACAATATACAGTCGTGATTTCTTCA
TTTAATTTTCAATTTCATATCTTTTCGCGATTCAATGTTAATACAGTAAT
ACCATTAAAGTATATTACATACGAGGATTCAATTCGAAACTCCTTACCAG
CTACTTTCATCTTTTCCTACCCCCTTGTTTCAGGTTACAGTCTCTTTTTA
TATCTTCGGATAATTTTTGTGGATTTATTTCAAGTGACTCCTTTACGGAG
GTCAGACAGACAGACAGAAAAATGAAGATTCTTAATATTCTAATAATTTT
AGTTAATTACTTGGTGGTTAGGTAAGATTTTACTTGTTGAAGGGGGAGGG
GGTGAAATGATTTCAAAATGAGGACATCAAGAAATTCATTTTTCAATATA
AATTTCTCAATACAGTGGGCACCATCTGAGAATAGGGTCAGTGTCCGCTA
ACTAAAAGTGTCCGCATTTTAGAAACTTTTCATCTATGTTCTAATTTTGG
TATAACGTACTATTAAGGGGTTAAANAACTTTTGATCTATGTTCTAATTT
TGGTATAAGGTACTATTAAGGGGTTAAGTATGTAAAATTTTGGACCTAAA
TGCGTATTTAGAGACACTAGGACATGGAAGAACAAGAAAATGATAATTCA
AATGTGACAATTTTAGTTTTTATGAATCATAGTAGTCTTCAGGGTCCTGC
AGTTTATCATTTTTATTACTTAAGAAAATTCACCGACTGAATAAAAGGAG
TGCTCGTCTTTAAACAATTAGTTTAATGAAACATTCAAGTATTTTTATAA
GAAATAAATAGTTTGGATAAATCAATCCTATCTAATCATGGATATTGCCC
TTATGTATTACATTGAGGTGAAATCTTTAATAAATTTTTAAAGTTTGTGA
CCAGTTTGACCGTCGATGTCTGCTAATTAGAGAGGAAAAAGTAGGGTTTC
GTCTATTTCGTGCAGAAAACTTTGTCCACTAAATGGATTGTCCGCTAATT
GAGTGTCCGCCTTTTGGAAACTTTATTATGACGATTTGAGTAGGAAATGA
CCGGGGAAAATTGAATTGTTCACTAATCAGAGGTGTCCGCCTTTTAGAGT
GTCCATTGATTAAAGGTTTTACTGTATAATATTTTTTTTCGAAAAAGATG
ATTGCATTTTTATCTTTGAAACTATTGTTCAGTTAGTAGCTCTACCTCCA
TCTATTTCGAACATTCATTGTCGAGAACAATATAGAATGAAGTCAGAGCA
GGGGTGTGTTGGTCCAGTGGTCTAACGCGTTAGGGCAACAAGGTAGAGGT
TCCAAGGAGTTCGTCCATATCAAAATTATCCGATAGGCAGGTCAGTTGGC
CACCAATAAATGGACCCCGTGAAAATAATTGGGAGACTGTTTCAAGGTTC
CTATGTTACTGAGCCTTTCAAATGAAGTATCGACACTGCAGGCACAGTGG
AAGCCTTTTATATCTGGTACGGCGAATGAGGAAAATTAAGCGATTTTATA
GCGATTTTATAGCGGTTTTACCGACGAAGAAGAAAATTTCGGGGTTTTTT
GTGAAAATCTGGTACGGTGGCCGCCGTACCTGCCGTACCCTTTGCGTCGT
TCCTGCACTGTATATACAAACGATTGTCAATATTTTCAGATCAGTTCATA
ACAGTTAAAATGAAATACCATATACGTTAAAACGGGGAATAATTTTGAGA
CCAACAAAGGCTTAATCATCAGGAACATCGTGGACCATAAATATTTTTAT
GCTTAACGCAAACAGAGCTGCATTCACATTATTTTTTTCAAGCAAGATTC
TCATCATAGAAGGTAATTTACCTCTAATAAAAACACGTGCTCATCTCAAT
TAGTCTCACTGTTGTTTTAGCTCAGTTAAATCAAGTCTTGTATCAGTCAA
ACCAAGTCTTGTATTGTTTTAATTTTTAAAAGAAAAGTTACCCATAGTGA
CACTCTCGCTATCAAAATATACGACAGCGGTACGCCTAATTGTATAGAAA
TTACATCACGTAATTCTACTCTCTCCTCGTCTTTATGATATTCCTTGTTG
TTATAATCTTTTTTACTCTCGGGTACCTAATATTCGGGAGGGCGGGGGCT
GAAAAAATCTCAAAACTTAATAAGAGGCTGGAATAAAAATGTCCTGGCTN
CTGAAAAAATCTCAAAACTTAATAAGAGGCTGGAATAAAAATGTCCTGGC
TGGATAATGTTTGAAAAATTAATTAGCGGAGGCTGCTATTAGGTACCCGA
GTGTAGTAGGCTTTCCTTTTTTAAATAGAGTGGTTCTTGGCGTGCAAGAA
TCAACCCTTGAAGAGTCTTTTTCTTTTTCAAAATCAACTTTTAATGTTTA
CGGCGTTCGAGACCTAACATGAACTACAGCTGACCTAGCCTGTTAGACGA
AAACCGATTTTTTATCGCGATTTAACTTTAATCTTAAAACAAAGAAAAAG
TTTGGTTTGTGGGAAGGCACTGGCTACAGATGACCCTTATCGCTTATACA
TATCTAGTACTATTTTGCCATAAGTTCTTGCGCTAAACCTCTATTGGTGA
CGTGAAAACTAAACGTAACCTACTAACGTGCTTCTTATATACTCTGGTAC
GCTCGTACCAGAGTGTCGGTATTGACCTTTTTTTGCGTCGGTATTTCGGT
ATAATTTTCAATCGGTGATACGGTAATTTTGGAGAAACGGTGCTAAATCA
AGGGCTATTTCTCAGAAATTCCTCTTATCCTCTTATCTCATATTAGAATT
TTGAAAAAACTATGAAAAAATGACGGTGTCGGTATTTCGTAAAAAATGTG
TCGGTATTGCAGTGATTTTGTGAAAAACTGTTGGTATTTCGGTGTCCTGG
ACCCTCGTACGCTCCCACTATAGAGGTCTGCGATTCAGACTAATGAATTG
CAGCATTATATACTTCCTTGAAATATAGGAGACTTTATCGGTAGAAGTCG
TGTGGAAAATCTTAAAACGATTTTCACCACAAAGTTTTCTTTCTTTTTCC
TTACATACAGCACCAATGCGAATTGTGATCTCGATCTTGGTTTCATTATC
GATGAATCTGGCTCCATCACCAGTACAGATTTCAAAAAATCCATCGACTT
CGTCAAATCAGTAACACAACAATTTAACGTTGATACATACAAGACTAGAG
TATCAATTATAACTTTCTCAAATGATGCTGTTCAACATTTTGCATTCCGA
GATTGGTATGGATACAGTCGACAAGGCTTGGATTATTATCTACCACGAAT
CCGCCAACGAGGTTTGAAAATCTTTGTTTTTTAAAGTGTTTGATTATAGA
TATATCTATATGATAATAAAACTCTAACCGGTGTAACAGAAAATAAGTAC
TTCCCGCAAAATAAGTACTCCCACTCCCACTCTCCGGTATTTTTTTTCCG
AGGAAATTTGTCCCACTAAACTTGTACTTGCTACAAAAGATATTTAAATT
TTAAGAAAAAGTGAATATCTTTATAGAGAGAAGACGCCCTCTTGGATATA
TACTTTCGGGAGTACATTTTTTCTAGGAAAATGGTACTGTATACCATAGA
CCTTCACAAACACCGGGTTGAAAGTAAAATCTATCGCTAAGGTTTAAAAA
AATGCAGTCCTCGAAAACAAAGGATTGCGGCGTGTTCTGGATGGGAAATA
AGTGGCTTCACTTTTTCTTGCCTGGGAAAGGTTAGAGATTCTACTGTATC
CTTTCGGGCTTTAAACTCAATGCATATACTGTTAACAGTGAAGATTCTGT
TTGCGTTCGAAAAAATGGCGTTTCTATACGACTCCATCGAGATAAAATGT
TCTCTTGTTATTGCTATCCTAAAGTCTGTTAAAAGTTTATTTATACTTCG
TTTCATTTTAATCATTGCTCTTGGTTAGAAAATTAACATATAATCATCAG
TATTACCTCGTTGAAAAGATAATTTTGAGTGGATAGGTTTAAGCATTTTC
TGAAATTTCTTTTGAAATTGAAGATGAAGAATGAAAATGAAGAAAGTGAA
GATCTTTTCCATCTTCTCCTTGTACAAAGAATTTCTTCACTGCAATTTTT
TTTAACAGACTGTAATAAAATTAATATTTTCTTATGTACAGGTGGGGGAA
CGTACACGAACAAAGCGTTGGATTTGGCACGAACCAAAATGTACACCCTG
AATAGCGGTGAACGACACGATAAAGTCAACGTAAGCTCATGCTACATTCT
GTTTTTGTTAACAAAATATTCTTCTCCTGATTTTTCAAATTTAGCCTTTC
CAGAAAGAAATTGAATTTGGAGGTAGAGGATACAAAATATTTTAGAAATT
CACCCCCCCCCCCCCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGACACTATATCCTATATATGTACGAACATTTTCTGGAAGAGCCCATTCT
TAGATCTTCCTTTTAGTTTTTGTGATAAACTTTTGGATTTTTAATCATTC
ATATACAGAAAAATCCTTGTTTTCACTTTACTATTTGAAGAACGAAAGCA
GACAAAATCTTCCTCTTTTTCAAGTACTTTACGATTCTAATTGGACAGAG
TAAACTGTGTTCACCCCCTGTATAAGTATCGGAGAAAGAAGTTTTTTCAG
AAGAAAGTGGATCAGTTTTTTGTATAGAGTAACATTTCATAGAATGCACA
GGGGTCCAGCCCCTAGCAATTTTTAGAAGGGGGAGGGCTATGAAAATAGC
CCCCAGCTAAATTTTAAAAAGCCCCCACCTCCACGAAAGGGAAAATAAAA
AAATTTAGCTTGAAAAAAGCTAAATTGATGCGCAATTTTAAGGCAGGAGA
TAAAGACTCATCTCATAAAAGATAAAATATACCTCAGTTTGATTACTCAA
AACATAGCCCCCTTATTGAGTTAGCCCCCAGCATTTTTTTTAATCGTCCC
CAAATAAAAAATTTGCCTCCCTCCTAATCTCAGGGAAAGGGCACCCCTGA
CCACAATACATGATTTCTAATCCAAGAAAAATGTCCAATCGATTAAAAGA
AATTTTGTTCATGTAAATTCTGTTTCACTTTTTTCCTACTCTTGTTTCGG
GGTTTACCTTTTTTTCAGGTCCTTGTGGTGATTTCAGACGGAAAGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031044XLOC_031044Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048853-exon-scaffold_147-1575043694:176787..176838TCONS_00048853-exon-scaffold_147-1575043694:176787..176838Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1575043694:176129..176232TCONS_00048853-exon-scaffold_147-1575043694:176129..176232Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1575043694:159778..160028TCONS_00048853-exon-scaffold_147-1575043694:159778..160028Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1575043694:158859..158947TCONS_00048853-exon-scaffold_147-1575043694:158859..158947Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1575043694:157841..157870TCONS_00048853-exon-scaffold_147-1575043694:157841..157870Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1510915933:176787..176838TCONS_00048853-exon-scaffold_147-1510915933:176787..176838Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1510915933:176129..176232TCONS_00048853-exon-scaffold_147-1510915933:176129..176232Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1510915933:159778..160028TCONS_00048853-exon-scaffold_147-1510915933:159778..160028Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1510915933:158859..158947TCONS_00048853-exon-scaffold_147-1510915933:158859..158947Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1510915933:157841..157870TCONS_00048853-exon-scaffold_147-1510915933:157841..157870Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1491911889:176787..176838TCONS_00048853-exon-scaffold_147-1491911889:176787..176838Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1491911889:176129..176232TCONS_00048853-exon-scaffold_147-1491911889:176129..176232Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1491911889:159778..160028TCONS_00048853-exon-scaffold_147-1491911889:159778..160028Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1491911889:158859..158947TCONS_00048853-exon-scaffold_147-1491911889:158859..158947Clytia hemisphaericaexon
TCONS_00048853-exon-scaffold_147-1491911889:157841..157870TCONS_00048853-exon-scaffold_147-1491911889:157841..157870Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_147supercontigscaffold_147:157841..176838 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.186205	0.180816	0.279676	0.123974	0	0	0	0	0	0.0373572	0	0.594823	0	0	0	0.224484	0	0	0	0.922548	0	0.480728	0.311949	0	1.73593	0.791873	0.440801	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048853 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top