TCONS_00048929 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00048929
Unique Name	TCONS_00048929
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	684

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_148:214797..228155-
coding sequence from alignment at scaffold_148:214797..228155-

transcript sequence

>TCONS_00048929 ID=TCONS_00048929|Name=TCONS_00048929|organism=Clytia hemisphaerica|type=transcript|length=684bp
GTTACAACGAAAAGAGTTATGAATACTTTATTTATATCGTCGTTGTCGTT
TCCATTCTTCTcatatcttttttcaaagttcATACTCCTCAATTATCCAT
CATGAAGAAAATTGATAACATAAGATAGATAATGAGTGATAAAACAGAGT
GGGCGGCAGATACCACCATGGAAGACAGTCAGCCCAAAAGTGAATACGTG
GACAACGATCAGGTCAAAGAAGATATGGAAATGACACAAAATGATACAGA
AGAATCGAAGATAAATGGAGCGACTGGTCGAAAGAAACGCAAAACCAAAT
CTAAGTATTCCAACCTTGAAGATGATGACCtcgaaaaaatgttgaaatgg
aAAAATGGTATTGGCTTGTTGCCTGGAAGCAATTTGAAGTTTCGTAAATC
CTTGACTGGCGAATTAGAGGTGATCACACCCCTCAGTGATGACGAGAATG
GCGAAGGAACTGTCGATGATTTGAGCCAAGAAGTTGAAAAATTTACTACA
CGAAGAAATCGCAGAGGGACCACTTCTCGACAAGGTACGCCCTCAGGAGA
TACACCCTGTTCCACCCCTCCGCCANTCTGTTttgtgcacaaaggtttct
agacgactaaaattgttccattcgttactttttgctttatttctactatg
tataaattagtcgtctagcttgctagactaattA

Run BLAST on NCBI

protein sequence of TCONS_00048929-protein

>TCONS_00048929-protein ID=TCONS_00048929-protein|Name=TCONS_00048929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
MSDKTEWAADTTMEDSQPKSEYVDNDQVKEDMEMTQNDTEESKINGATGR
KKRKTKSKYSNLEDDDLEKMLKWKNGIGLLPGSNLKFRKSLTGELEVITP
LSDDENGEGTVDDLSQEVEKFTTRRNRRGTTSRQGTPSGDTPCSTPPPXC
FVHKGF

Run BLAST on NCBI

transcript from alignment at scaffold_148:214797..228155-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00048929 ID=TCONS_00048929|Name=TCONS_00048929|organism=Clytia hemisphaerica|type=transcript|length=13359bp|location=Sequence derived from alignment at scaffold_148:214797..228155- (Clytia hemisphaerica)
GTTACAACGAAAAGAGTTATGAATACTTTATTTATATCGTCGTTGTCGTT
TCCATTCTTCTCATATCTTTTTTCAAAGTTCATACTCCTCAATTATCCAT
CATGAAGGTAAGGCTCATTTGTAAAGTCTGTGAAAAGTGGAAGCTGGAAT
CATAAATGTTAGAATTGAAGTTTAACTATGAAAGATTTAACAACCAGGAA
TCACAAAAACTATTGGAATTTTTTAACTGTGTTTTATATAAAAGTACGAC
GAGGGTTACTTTAATCTTACTCGTTTTTGCTTGAGATCTGAATTATAATA
TTTACAAAATTCTATCTAAAATTATGTTCTATCCGCAACGGTTTATAGTA
TAATAATAAATATGTAAATTGTTTCAGTTGTTCGAGAAATATTCCTACTC
TCTAGTCTGCTTTTTTATAATTGATCGATAGTTTTTGAATATTTTCATGC
TTTTGTTATAGAGATCTAACGTACGTAATGATTTTCTTTAAACAAAAATA
GCAAACAATTCAATGACATAAAATTAAATTTACAAATCGTTCTACTTTTT
GAAGTTTCCAACCTCTTCCACCCTGTATCTAAACTGACGAAAGGAACCAG
AAGGAACATCAATTTAGAACTCGAAAAGATTTTTCATCTAGAAATTCTCT
GCCATTTTTATAAAACTTTTGATGCGTAAAATAGGCGTGGAATGATTGAT
AGTCTGTACACACACCCAGTATCTACGGCTTATTTCAAAATCCATTGCCG
TAATTCATTGTACTACGAAGTGATAAACGCGAGATACACTACTGTAATGG
TACAAATGAACGGAGATTTTTAACACGTAAAACAAAAGAAACTCATTATT
TAAATTGCTGCAATTTAGATTGTTTCGAAAAGGCCGTTCGACAAGATCTC
TTACTGTATAAATCTGCAATGGAGTATCCACTTTAAAAAAATAGTCGCTA
TTGCGAGTTATTTTTATGTTCATGGATGTGTTGCTAGTTTGGTGGAAATA
TGTGTTAGCTCTGTTGAATAAATAGTGAATACTGTAGTCTCTGCCAGTGT
CATGTTTAATATTTCCAGTTATCCAGTCATTTTAGAAAGATTGGAATTAC
GACAAGTATTTAAAACAACATTCCAATTAATGCGGCCAATACCATAGTTG
GAATTGCACAAAAATATGCAAATTGTTGAGATTAAAATTAGCGAGAGTTG
ATATCAAAATTATTACAAATTATTGAAAATAAATGGACGCCCGGGCCAAA
ACTTGGAAGAACTTAGAACAACGAGCTAGAAAAAAGTGAACGTGTCTGCT
TTTATTGGTATCATCTGATATACCGTATTACTTCAAATAAATCACCTGGG
TGTATATTAAATATTTTTGTTTTTAAGAGGGATGTTCATTCGAGGGGGCG
GGTGTTTAAAAGAAGGGAACGTTTATTTATAACATTATTTTATTCTAATT
TTTTGTTCGATTACATAAGTTGGGCAATTTTGAGTTTCTAGGGAAATTTT
ACTTTGAGAAAGCTTTTTAGATTTACGATAATAATTTTCGATTTATAAAT
TCGAAATCGGTCGTAAAAGTTTTCGCTGGAGATTGTCGAGTATGCAATGC
TAAATTACTTATTGTGGCAAAAGGTTAGTATTTAGAACAGTTCCAAAAAT
CCCCTTCATTTTGGTTTTGTGACATTTTCTGTTTTACAATATTGGTTTTT
CATAAGTGACATTTTTAGACTTACCATAAAGGAAAGGAATTTGCTTTCAT
ATCAAGCCTTATCTTTCATCTCCAAAGTTGTGGGAGAACCAAAAAAATAG
ACTTAGTCTACAAGGAGATATGAAAGTTGTGTGACATTTTTATACTTACT
TTAAATTAGACTTACTCTACTACTAGATCGTTGTTTGAATTTTTAGCAGT
AGATCAAAGGGAGTTCAAATTTTTGGTTAGTGAAAAAATTAGACTTAAAT
ATCTTCCATTTAAGGCTTGGGGACTAGAGAAGTTTTTTTCGCGTTGGTGC
AATGCAACATGCTGCATCCCACCAACCTGAAACGCTTTCTCGTGTCTTCA
CCCCATTTTTCTTTCTACCAATAAAAGTGAAATCTGACTTTTGTCCCAGG
GACAAAATCAGCGTGTCTTTTGGGTATTTCCCTCATTTTTTGTCCCATGA
AACAAAAAAAGAAACCATGGGACACACATTTTTTCCTGTGTTGGTGGGAT
AGACCATGTTATATTGCACCAACGCGAAAAAATCTTCTCGTGTCCCCAAG
CCTTTAGATTTTTCATATCCTTTTTATCAAAAGTTACAGCCCATCAAAAA
GGGTATAAATAGGCGATAAGTTGATAGTAGCCATAACCCTAGATCTAAAG
GAGATATAAAAAATCATATTTCATATTTATACTGCTAAAAAATATCGATG
ATGCTTTATTTTTATTAGCGCGTATATGTTATGTGAGTTTGCAGTATAAT
TGTGTCTTTAGATATCAAGTGTCGACAAAGCAATGTCATACCCGGTTGTT
GGTGTTGTTGTTTTTAACGTACTTATGTCCGGTTCTAAGTTTACGGGTCG
AACAAATAATTTTCTGCTAAACGGAGGAAGATGTACACCCTGTAATCCGA
TTTTCTTGTCTGATCTCCGGCTTTTAAGTAGGGAAAAACGGCCAAAATCT
AATGGCGAAAAAGGATCTCCGTAAGGCTGTCCTAAAATGATACGAAAAAT
CAGCGAGGATCAGATATTCTAAAAGGACTTAAACCAGTACAAAAAATATT
GTTTCAGCTTCAGTTTCAGTTTATCCCGTCCGTTCGTCCGTCTAAAAAAA
ACAGTTTTCCTCGGAATACACGGGTTGCGAAATTATATCAGTGCAGTCAA
AACATGTGATTACTCGAAAAAGTTCAGTTACAACTGATAACTTTATTAGT
GTCAATAAATTCGAACCAATCAGAATAAATGTCATGTAACAAGCACATAG
AAATCTTGTCTTCAGATTTTAAAATTTTGCAGCCTGTGTATTGGCTCATT
AGTTTTTTCCGGTTTTTGGCACAATGATGCAAAATGGCAAAAACGAAAAA
GTCTCGAAGCCCAATTAAAAATTTTTTTGGGGTAAATTTTGGTTGAGAAG
TGCCTTAAAATAAGGTATAGGCTATTTTTTGGCGAGGTTTCATAAAAGAT
GGCCGAAGTAATTTTTCCCGGAAATGTTTTTTCAACTTAAGATATGAATT
TTTCATCAGAATTTATCACAGAATTAATAAGTCAATGATAATTGTAGAAG
ATCGACTTATTTTCAAACGATATCTCTCGATTTGAAAGTGCTATGATTTT
ATAGAAAATAGTAAATACAAATACAAATTATGCAAATTAAAATTCTATTG
TTTTGATCCAGTCTTCTAATGTGTTGGTATTTTGCTGACCAGAATCTATA
TTTAGAGGAATTTAGTTTAATGCTTGAAAACAAAATCGTTCTATTTTAAT
TTTAAATGATACACTTTATCTTGATTGGAACGCCTTTTACCCCTCTTTCA
TATTACATTAATCTTCAGTAGGTCTATTCAGCATGTAGCTTGTTCATTTT
CGTTTTTCTTCTCCATTTTTCACTTTTCCATAAATGTTTCACTTATATAT
CTATTGGAAAATATTTTTACGAAAGATGGGAAAGATTCCAAATGAAGAAG
AACGACGATTTTCTTGTTTAGTACCTAGAAGACCAACCAAATTTATTTTT
CCTCTAGTATCCGAAACGCTGCGATCAACTGTTTTGACGGATACGACTTT
TCGGTGGTCGATAAAAAAAGTAAAGGTCAGCCAGCTACATCTTTTTTTGC
CAATCTTTCCAGTCCAGCCAAGTTATTCGCTAAAACGAAGCTAAAAATTT
GGCGCAGAAAACTTTAAAAAAAATGGTCCGATGCCCTTTAATTTACACAC
CCGGGGGAGTACTAGAGTTGGTGAGTGAGGGGTATGTGCGGACGGGACCT
CCGAAAACCGACCCTTAGAGAGACCAAATTTAAGTGAAAAAGTGACCCTT
AGAGAGACTTTTTCGAAAAATTTTCTCTGATTTTCANTCCTCTAGTATCC
GAAACGCTGCGATCAACTTTTTTGACGGAATTTTGACTTTTCGGTGGTCG
ATAAAAAAAGTAAAGGTCAGCCAGCTACATCTTTTTTTGCCAATCTTTCC
AGTCCAGCCAAGTTATTCGCTAAAACGAAGCTAAAAATTTGGCGCAGAAA
ACTTAAAAAAAAATGGTCCGATGCCCTTTAATTTACACACCGATGCTTTT
TAAGGGAGTCTTTCTTATTCTTCCTAAGTTTTGCCCCTTTTGCTCTGAGA
ACCCTTTTTGGCCAAAATGAGGCATAGACTTTGGGCAGTTTTCTGCTAGA
TACGAAGTTCCCAAAAGGTTGGCAGTTTGCAATTTTCGATATATTGAAAA
AGAGAAGATCATAATTTTTGAACATCACTTATCTCAATTAGATCAAAAGT
TACAACCCTCGAACATAAACTAAAAGATTTCTTAAAGTAGTTGACAATGG
GAACTAGCAAATAGGGCCCATTTGCAAGCGACTTCAAATAACTGGTTGAC
GATATATCAAAAGGCTTTGTTAATTCTTAAGGCCTTTTTTTAGACTGAGT
GTACATTTTGATGAGAATTTTTTTCTAAGCGAACATAGTGTTGATGCTAT
GGCATGATTCTACTAGAAGTTAATTTTCAACATAATAATATTCCACTCGC
AATTATCTTTTCAACCAGCACAGAATTGTAGTTGATTGGACTTGATTTTT
AATATAATTTACATGTCAATCTGCTTTAAAGGGTTCCTCGTCATAAAAAT
GAGCGATGAGAGATTTTGTTCTCAATCTAACACAACAACAATTTTTGTTT
GTATATTACATTTTGCTTTTTTTTCATCTCTAGTTATTAACATTAGCAAA
AAAGATTTGTAACAAACTTCTGAATGCAAGTCAATTTTTTCAATCTGGGT
CAGCAATACTTACTTAAAATAAACGCCCAAATAATCTACATCCAAGATCA
TTTTGATAATGTGAATTATCTTGCCTACCTTACTTTGCCTGTTCAATCAG
TATCCCTTTAACTGCCGATGTCGGCATATGCCGACATGAGCATTTTCAAT
TTCTTTGCCGATGTCGGCAAATGACGACATGCGAAATCTCGACCTATTTG
CCAGAAATTTATCATTTTCTACAGAGATTTTGCATTCGATGGTTTTTTAA
TTATGCTTCTTTGCAGCTACTTGAGTCAAATAAACGCCCCTCCTAGACAG
TACTAGAGGGCAGCATTTATTCGAAGGAGAAGGGCGTTTATTTGATGGGG
GAAGTTCGTTAAAAATTTTCCTCAAAGGAGGGGTGTTTATTCGAGGGGGC
GTTTAAAAGAAAGGGGCGTTCATTCGCAGTAATTTGGTAAACAAAAAAAT
ATCCCTTAATCTAGCAATCTTAACTCTAAACTTGAACCTTTCACAGCTGT
TTTTTAAGGCAGTTGGCTCAAATTGAGTCTAAGTTTGCTAGAAATTCAAG
AACTAATTTTTTCACCGCCGTGGCTTGGAAATATTGATATATCCATATAT
ACGCCCCCTTTCTCACAGACCCGGTGGCATTTTATCAGCCGGTGGGGATA
AAAATAACGGCGCAAAGCGCGATGGGGATTTGAACTCCCTTGTTTTCTAG
CCATAAAATTCAGTGGGGACGGAAAAAATGGCACAATCTTTTTATCGAGG
ATTTGCTTATCTATAATTATTTTCAGCGGCTACGAAAATCAGAGTATAAT
TTTTTAACGATATTTCGGTCATTTTTTCCAGTGGGAAGGGTTCTCAGTCT
ATCTGTGAGAAGGGGGTGTATAGAATATCCATAGAGTGCGTTCGTTTACA
GCCGGCGGGTTTTGTTATGTATTTCACTGAGAAGGTGGATGCGTACGTTC
TTGATTTTCTTTTCTTTTTCATGCTAACAATATTGATGATTGGAACTTGG
TTTCTCTCCGTGGTGAATTGTGGGGAATAAGGAATTTTCGTCTATCCATC
TACAGTAAACAGTAGAAATAGATACATATCCCCATAGGTAATTGTTCCGT
CAATCCAACGATTTAGAACTCTGAAGTGAATGGAAAGATATCAGTCACTG
AGACAGGGATTTCTTTCAATTGCTCAACAATTTGTAATTAGGGGAATTTG
AAGGTCGGACACTGTTCGAATCGAACAATTTTCCAGCTTTTTATCAGAAT
TTTACGACTTTCGGGTATGTTAGAGGTACGGCAGCACATGGCCAGTGTCT
TTTGCCTGTTATATAATTTTGTACCCGATAAATTCGATATGCTACACGTT
GCAATAGAGGAGCGATAAAACGCGTTTTTATAATCTGAACATTTTCTTTG
CACAAACACAAGACGCTACTTTACTCTCGCCTTTCTCTGATATAGAAGTA
GTATAAATTTTCAAAACGTTTCTCAATAACTATTTTGATTGGCTATCAAA
CAATAACAACAGTCAAGCACAGGCCCCGCACTGCAATTCCTTTTTTTGTT
ATTTTCTTAATTATGACACTCTCCTTGATTCTTTTATCATAATCGTTTGA
GGAAGGTTTTAGTCGTTTCAAAGCACAACGGTGGAGTGCAACTTATTGTG
GCAAATGGAGAAGCTAGAAAGAGAGAGAGGAGAAGAGAACATCCAAGGGA
ATAGTTTGAAAGCCTTCGAACGAACTACGACTACTGTGTATTCTATAACA
TCGTTCTACATACAACTACTATTAGATTTTTGTTTCTTTTGCGTACACAA
AGATGTCCGTGGAAAAACTTTGTATCGTTCAGAATGAAACTTTTTTCTGT
TTAGACTCTTGTCTAGAGCTCTGTAAGTCAATGATAAAGGCTAATTTGAC
TTTGATTGAATTATCATAGGTTAACGTTTTACTCGTTTCGCCAGGGACTC
TTAGCTTTAAAACTGTCACCAATGAAACCCTCCAGTGTCCAGAGCTTTCT
CTTCATAAAATAGGCCCTTTTTACACTTTTTTTTATTTTTCGAGATTTTT
TTCTGCAGTTCAATATTTTCTTTTATCTTCCAATGTTTTTTTTTCAGTGA
AGTTGAATTATTTTTCTTTTTTCATCGTTGAAGTCTTTATGAAAAATCGT
GTTATTTCATGAAATTTTATCATTTAATTTTCCTTATAATAAAGGACTTT
TCCAGGTAGGAAGGAATTTGTAAAATTTAATAATTTAAAATGTCTTCTGT
TTTAATCCAAAAAAATTGGTCAATCTGTGCAATTTTTCAGAAAAGTTACA
TTTCTATCGAACCAGCTTTTACACGGCGAGGTTCTTTTAAATCAGAAAAT
AATTTTTCTAGAAACGGTATTGAAAACTAACAGTTTTCAACTTTCGGGAT
TTATATTTCACAAATTGTCGAATAGGTAGGTTCAAAAAATCTTTTAATAT
TTGTACACGATTTATAGTTCGTTTGATACTGCTTGGGAAAAATAATTGAT
TACTTTTATCGAGTTCTTGTATTTTGAAATCAATGAAACAGGACAGTAAA
ATGGTCATTACTCAAACAATAAACGGGCTATAATTTCTTTCTCAACCAGT
TTTGATTAAAAATAAAACTTATCTAAATCATTTCAAATCTTATTGCTCAA
ATAAATTTGAATATCTGATTCGGTGAATTGGGTCTGTGATAAAAAGGTTA
CCATTTTCTATCTGTTTCATTGTGACAAGTTTATGGGCTTAGTTCGGAAA
TAAGATACCATTCAAGCATAACAGACATGCTTTAAACTGATGACAAATAG
CTTATGATCTTTTGGTTGCCTTTACTGCCAAGAGAATATGAAATTTTCCA
ACCTTTGAATTTGTTTGTAGTAGTAGCGCGTTAGACATTTTCAAACAGAG
ATCGATGGAACATAATTTGTCGAATAATTCTCATATTTCGTCTTTAAAAC
AATTTGTTCAGATGTTGAGGAGAGATATTATGCTAATGTTAAAAGTAAGT
AAGATAGGATGAATAATCAATTAGTTTTACTTCTTTTGAGCCAGCTTTAA
TTGATTGTACGCTATGTTCGAAAAGAAATTTGGACAACTGCTTTCAAAGA
ATGAGAATAGTCTGTTTTGTAACAGATTTAACATGTAATTGCGTTGTCGT
AAGAAACTGTTGGCTCAGACAAAAATATTTTTCAGAGACTTTACTGTAAA
ATTTCGGTTGTTCTCATTTTAGGATCGGGTTGCTGGTATAAACCGAAATT
TTTGATTTCCCGTTTCGTTTCAACGAAAATAATTTCCTTATCCAATTTGA
CATTTTTATATTTTTTAACCCTGCAATTTGGCGTCAATTTGATGTTTATG
TGTTTCAAATACAAATGAAATGGCCCAACGAGAACGATGATATACTCTAT
TTTTCCTTTCTTACTTATTTTTTGTCAGAATCAAGTAAAAGAATTAGTTT
GTATCCGAAATATACTCGAAAATTGCTTCAGATTGTTTGTTCTTATTTGT
AACCGGAGAAGGAATTCCTTTTGATGAAATTTCAACCATGTAGTTGTGTG
ATGCGTGGATGACATGTTGCACACCATACCTTTACACTTGAGTCATCATC
AAGTCAAATATCCTTCATCTAAGTAACAACCGGAATTTTTGAACGAATTT
CTCTTTAATTGATTAAGGATTTCCCTTGTTGAATCTTGGTAGTACTAGGT
TTGATTCGTTCTTTTTTCAGCCCTAGAAAAGAGATATATGTTTAGCACTC
GGATATAGGTTATAAAATAAATATAGGAATGGGTCTTCCAGTAAATGTTT
CATGATCTCTTCTATGAAGTTCTGATTTGATAGAACTTTATCACAGTTTT
AATTAAGTCTAGCAATAAAGTAGTAGTTAATTTATCTAGTAATTTGGGAA
AGCAACTTCATTATGGGTTTCATTGCAAAAAGAATGATGAAAATTGATCG
GCATAAATCTCAAATGAACAAACAATGTTTCTTGGATAGAAAAGGTGACT
GATGAACAAAATGAGAATTTTTCATTTTTTTTCCTTCAACAATGGGAAGG
CGATGCCAGGTGCAAATTGCTCAATGTACGGATGCGGCACCTCTCGTAAA
CACAAAGATATTGGTATATTCAAACTACCCTTACCCAAAGATGATTTCCA
TCGAAAATGGCGGCAAGAGCTGATCGATATCATCTTGAGATATCGAGTAC
TTGACGAGAATCTTGAGCGACAAATTCAAGAAGATCGAATACATATTTGT
CAACGCCATTTCCGAGAAGATCAGTTTTATATTTGTAAGTTTTCTTTTCC
ATTCATTACACGAAATTCACTTCTCAAAGAAATTGTCTAAGTAATGATGC
TATGCAAGGCTTACGAATAAAACCCTGAAATGGGCTACCTTAAATTCAGC
ATTCCCCCTTTTATCTGAGAAATATTATTGTTATTTAAATTAAATTAATT
AAGTATTAATATTATTACTATTATTTGGATATGGAATGATTTTTACTGTA
AACAATGTATGCATCTTTTAAGCTAATAAGCCAACACTTTTACCTCCCTT
AAAACTGTATTTTTCTTTTCTTCAGATCCGAGCCGAAAGCTGCTGAAGGA
AGGAGCGTTACCGACATTGAATCTTGTACCTTCTCATATGAACAAAATGG
TGACGTCAGGCAGACGCAAGCTCTCGACAAGTCCGAACACATTTTCCACA
TATATACCAACTAACGATAGAGTTTCTAGCGAAAGTACACCTTCAGACGA
AATACCAGAAACAAGTAGGACCTCTCCTTCAAAACTTTGGACTGAAAGAT
ATTCTAAAGGGACAAAAAGAACCAGGCAACCTGGACCTCCTCCACTAAAG
CTAATCCACGGTGAAGAAGATTACATCAACAGACCTCCTCCCTTGGAGAA
AATCCAAGATGAAAAACTTTATTCTGAAAGCGAAAACATGCGAGTGAATG
TGAATGGTGAAGAATTTCAATACCGAAAACAAAGCGAAGGTGGAACTCTC
AAAGAATTTTATTCAAGACGACGCTCAGAAACTTTCTCACCGAGACCTGA
TATGCCACTGTTGATTCAAGACACTATTGCGATTCCAAGAGAGGAGACAT
GGAGATTAGGACCACATCACACAGCAACGACAACAACCACCACCACACAA
ACAAACACAATAGCTACCTCCCATTACACGCCTTATCCGTCGTACTCAAG
AGGAGCGAGTAAGGGTAGAGGCGACAGACACTTCAAACACTACGAAACAC
TCAATCACACCCACCGTACAAAACCATACAATAGATGTGATCATACGCGA
ACACACATTCACGACCACGACCACATCGAGATATACCACGAAGACTATTC
GCGCAACGTTAAGAGACCACACTTAGATAAACAAAGATATGAGGGAAATA
GTAGTGACACGTACAAACGATCTGCTTCCATTGATAATGGTTCTCAGTAC
AGATACACTTCACCAAGGCACAGTAGTGCCACAGACTCATTCCATCGTGG
AAAAGATCCTTATACCAAAAGACGTATGGAAGACCATTGCGCTCTGGAAG
ACGATGACGTAATCGTTCCCAGGAATTTTTACGGAAGCAATAGAAATGTT
GAGGAAGACCAGCACCAACTAGATACAAGAGCACATCATGATTTTATTGA
CGTCATCTCAGTGGAAGAGAGCAAACAAAAGAAAAATCACCACAAAAATT
CTGAGCCTCGACCGATGTCTCCGGTCTATAGTTACCTGTATGAACCTTGA
GAAGTGATTGGTTCGTGCGTTCTCTTTCCATTCAGTTATTTAGTTCGATT
ATCTTTTATACCATTCACGATATTTTTAAATTACGCATCATTTTAAGTAA
ATCCATATTATTAAAAGTTTGTATCATAATTTTTTTACATACCACGCATT
ATTTCCAATGAAGTTTAAAATCAATTTAAAACGATTGCTTTCATCTCTCC
ACACTCAACCATTTTGGAAAAGTTCAAATACCTGTTTTTTCGTCCTTGTT
GACAACTAAACCTTTCCTGATTTCAGAAAATTGATAACATAAGATAGATA
ATGAGTGATAAAACAGAGTGGGCGGCAGATACCACCATGGAAGACAGTCA
GCCCAAAAGTGAATACGTGGACAACGATCAGGGTATGTTATTTCATCATT
TATCACACAAAAATTCCACCTTTATCACATTAATCAACATCTTTATTTAG
TTCTTGTTTCGAAAACGCTTCCAGATAGTGGGAGATCTGCTTCGGTATGT
GTATGCTCTTTAGAATCTCATCAGTGTTGGCCATGAGACAGGGGTGTCTA
TGATATGTCAGTCTATCATTGATCGTGAAAGAAATAGATAATCATTGGTT
TTGATTACTAAACAGTAAATTTGTGACTAAAGCAACTACCTACTTGCTCT
CTCCCGAAAATTGATTTAGAATAAAACATGTTTCGAGAAATATACCCACA
CACACGCCTAGGATTGATGTTTGTTATTGAAGCATAGCTCACTTTCATTT
TAGTCAAAGAAGATATGGAAATGACACAAAATGATACAGAAGAATCGAAG
ATAAATGGAGCGACTGGTCGAAAGAAACGCAAAACCAAATCTAAGTATTC
CAACCTTGAAGATGATGACCTCGAAAAAATGTTGAAATGGAAAAATGGTA
TTGGCTTGTTGCCTGGTAGGAATCTCTGTCCATCGTATATAGAAATTGAT
TTGGGAAAGTAAAATGGGTATAATCGAAATATTATAACACAGGTCAAAGC
TAAACTTCTCTGACCATAGTGAATATTTCATACTAGCAATGTACAAAATA
TAGATTTCTGCCTGATGTAGCCAACAAAACTATGGCATGTTATACATTTT
CTGTTAGGCCAACTATTCCTGAATCTGAAAATTTAAAAATCGTAATTAAA
AAAAGTTGATGAAGAAGAAAGTAAAAACTTTTGCAAAGAACGGTATTATA
TCTATGAAGACCTTCCTTTCGGCGAAGAAAAAAAATTTTGAAAAAAAAAA
TGCGTTAAAAATGGAGTATGTATCAAACCAATAAAAAAATATTGTCGGAA
AAATTTTTGTAAAAGCTTCTTTAAAATCTTAATAAAATCAAAATCTTCTG
TTTCCAAAGCGGTTTTTTGACCGACTTTTGTAGTAAAACAGTTATAATTT
TTGATACATCAATTTAGAAAATTTTATCGAAAAATTTCAAAAGTTCAATT
ATTTACTGACAATTTAAAAGAAATTCGAAGGAAAAAAGTGGATCACCCAT
TGAAACTTTGTATTCTTAATTACTCTTGTTATTGTAAAGGCGATTTTTTA
TTAAAAACCTAATTTTAACAAAAGTTTTATCTTGAGTCCCTTAACAAATT
TTTCTGACTATGGTCAGAGCCCTTAAACACGATGTTTTTAATAGATAAAT
ACTGAAACAGAGATGCTGCGTTAATCTCAACGTAAAATGGCTTTCATTTG
ACAGGAAGCAATTTGAAGTTTCGTAAATCCTTGACTGGCGAATTAGAGGT
GATCACACCCCTCAGTGATGACGAGAATGGCGAAGGAACTGTCGATGATT
TGAGCCAAGAAGTTGAAAAATTTACTACACGAAGAAATCGCAGAGGTAAT
CTTTTGATTCTCCCCCCCCCCCCCCGAAATTTAAGAATCCTCCTGATTGA
AGCGCTCAAAGTTATAACTTACGAAGATAAGGGTGAATTTTCATCATTTG
AGAATATTTGAGTAGTATTTTGAGTAAATTTGATTTAATACTCTTAACAG
ACAATGACTTGACTTCCTTCCAGTTTTAAAAGGTATTTGAAAATGTTGGA
ATGTGTAAACAGGAGAGGCAGAATGTGAAAATAAGAGATTTTGGTGAGAT
TTCTGCTTGCGTTTATTGCTTAAATTCTGTATCGATAAAATTTGCGTTTG
TTTGAAGACAATGACCTAAGCATTTTTTTGTGTAATTTTGAAGGCTGAGG
AATAATGCTAATGGGGCTGGGAGCTTTTCTGGCTAATTGTTTGTCTCCAT
CAACAGATCATTATGTATGCTAGTCGTTTGATGAGTGTTCAATCAGTTTT
TTGTTGATTGACATTTGAGCTAGATATATTCAATTATAACTAATTAATCG
TCATCATTCATTCCATGTGTAGTGTAGGAGAGAAAGAAAATTTTTACATT
AGTTAGTAAATTACTGAACATGACAATTACTCAGTCCGATATGCTGCATT
CCATCTTTATAAACACATGCACTTCCTGTTTTCATACACAGGGACCACTT
CTCGACAAGGTACGCCCTCAGGAGATACACCCTGTTCCACCCCTCCGCCA
NTCTGTTTTGTGCACAAAGGTTTCTAGACGACTAAAATTGTTCCATTCGT
TACTTTTTGCTTTATTTCTACTATGTATAAATTAGTCGTCTAGCTTGCTA
GACTAATTA

Coding sequence (CDS) from alignment at scaffold_148:214797..228155-

>TCONS_00048929 ID=TCONS_00048929|Name=TCONS_00048929|organism=Clytia hemisphaerica|type=CDS|length=1884bp|location=Sequence derived from alignment at scaffold_148:214797..228155- (Clytia hemisphaerica)
GGACCACTTCTCGACAAGGTACGCCCTCAGGAGATACACCCTGTTCCACC
CCTCCGCCANTCTGTTTTGTGCACAAAGGTTTCTAGGAAGCAATTTGAAG
TTTCGTAAATCCTTGACTGGCGAATTAGAGGTGATCACACCCCTCAGTGA
TGACGAGAATGGCGAAGGAACTGTCGATGATTTGAGCCAAGAAGTTGAAA
AATTTACTACACGAAGAAATCGCAGAGTCAAAGAAGATATGGAAATGACA
CAAAATGATACAGAAGAATCGAAGATAAATGGAGCGACTGGTCGAAAGAA
ACGCAAAACCAAATCTAAGTATTCCAACCTTGAAGATGATGACCTCGAAA
AAATGTTGAAATGGAAAAATGGTATTGGCTTGTTGCCTGATGAGTGATAA
AACAGAGTGGGCGGCAGATACCACCATGGAAGACAGTCAGCCCAAAAGTG
AATACGTGGACAACGATCAGGGGACCACTTCTCGACAAGGTACGCCCTCA
GGAGATACACCCTGTTCCACCCCTCCGCCANTCTGTTTTGTGCACAAAGG
TTTCTAGGAAGCAATTTGAAGTTTCGTAAATCCTTGACTGGCGAATTAGA
GGTGATCACACCCCTCAGTGATGACGAGAATGGCGAAGGAACTGTCGATG
ATTTGAGCCAAGAAGTTGAAAAATTTACTACACGAAGAAATCGCAGAGTC
AAAGAAGATATGGAAATGACACAAAATGATACAGAAGAATCGAAGATAAA
TGGAGCGACTGGTCGAAAGAAACGCAAAACCAAATCTAAGTATTCCAACC
TTGAAGATGATGACCTCGAAAAAATGTTGAAATGGAAAAATGGTATTGGC
TTGTTGCCTGATGAGTGATAAAACAGAGTGGGCGGCAGATACCACCATGG
AAGACAGTCAGCCCAAAAGTGAATACGTGGACAACGATCAGGGGACCACT
TCTCGACAAGGTACGCCCTCAGGAGATACACCCTGTTCCACCCCTCCGCC
ANTCTGTTTTGTGCACAAAGGTTTCTAGGAAGCAATTTGAAGTTTCGTAA
ATCCTTGACTGGCGAATTAGAGGTGATCACACCCCTCAGTGATGACGAGA
ATGGCGAAGGAACTGTCGATGATTTGAGCCAAGAAGTTGAAAAATTTACT
ACACGAAGAAATCGCAGAGTCAAAGAAGATATGGAAATGACACAAAATGA
TACAGAAGAATCGAAGATAAATGGAGCGACTGGTCGAAAGAAACGCAAAA
CCAAATCTAAGTATTCCAACCTTGAAGATGATGACCTCGAAAAAATGTTG
AAATGGAAAAATGGTATTGGCTTGTTGCCTGATGAGTGATAAAACAGAGT
GGGCGGCAGATACCACCATGGAAGACAGTCAGCCCAAAAGTGAATACGTG
GACAACGATCAGGGGACCACTTCTCGACAAGGTACGCCCTCAGGAGATAC
ACCCTGTTCCACCCCTCCGCCANTCTGTTTTGTGCACAAAGGTTTCTAGG
AAGCAATTTGAAGTTTCGTAAATCCTTGACTGGCGAATTAGAGGTGATCA
CACCCCTCAGTGATGACGAGAATGGCGAAGGAACTGTCGATGATTTGAGC
CAAGAAGTTGAAAAATTTACTACACGAAGAAATCGCAGAGTCAAAGAAGA
TATGGAAATGACACAAAATGATACAGAAGAATCGAAGATAAATGGAGCGA
CTGGTCGAAAGAAACGCAAAACCAAATCTAAGTATTCCAACCTTGAAGAT
GATGACCTCGAAAAAATGTTGAAATGGAAAAATGGTATTGGCTTGTTGCC
TGATGAGTGATAAAACAGAGTGGGCGGCAGATACCACCATGGAAGACAGT
CAGCCCAAAAGTGAATACGTGGACAACGATCAGG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031079	XLOC_031079	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00048929-protein	TCONS_00048929-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_148	supercontig	scaffold_148:214797..228155 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.6807	15.2048	3.46801	2.26539	4.43184	4.21844	17.7648	17.9796	9.46201	11.3823	9.9129	6.52617	6.41303	7.75231	5.11409	6.08187	10.3847	12.4134	5.02177	5.68281	5.1893	6.31898	12.3319	13.4573	9.78334	8.51669	2.67396	2.40732	7.81876	13.1336

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00048929 vs. Swiss-Prot (Human)

BLAST of TCONS_00048929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00048929 (transcript) - C. hemisphaerica