|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048960 ID=TCONS_00048960|Name=TCONS_00048960|organism=Clytia hemisphaerica|type=transcript|length=1312bp
caacTGGCAACCTCAAGACCTCCAAAGTGTCATTTTCAAACGAAACATAC
AGCAATTTTAATGACAAAGGCTTAAAAAACAGGTAACAGGAAGAATCCAA
ATgtaaaaaaatgttatttggAGGAAAAGTGCTCTGTTTTGTGACAGGTG
CTAGTAGTGGATTTGGTCGCTCAATATCTAGGTTGCTTCTTTGTCAGAAT
GGTCTGCTATCAAAAGCTCAAGTGGGCTCTCAAATTATCCTGATGTCAAG
AAATCTTGATCAATTGAAGGAGACTCAGAGGTTAATGGAAGATGGATCTA
CAAACAGTGAACATTTTttaatccaatgtgaaaagctGGATCTTAGCGAT
ACAAATGCTgttgaaattaaatttcctgATCTGCTTATGTCTTTAACAGG
AGAATTTGATCATGTCTTATTTTTCAATAATGCTGGTTCAATTGCTGATG
TTTCTAAACCTATCTTAGACTATCAATGGAGTATACAGGATTACACAAAA
TATTTCAACCTATCAATTATTTCTTCCATTTACATGATTAATGCCNTAAA
CCTATCTTAGACTATCAATGGAGTATACAGGATTACACAAAATATTTCAA
CCTATCAATTATTTCTTCCATTTACATGATTAATGCCATGATTCATAAAT
TTTCTCTCCATCCCTCAAAAATTGTAATTATCCAAACATCAAGTCTTGCA
GCTGTTCAAGAAATGGCGTATATGCCATTATATTGTGCTGCAAAAACATC
AATGGATATGTTCATAAAATGTGTTACCAAGGATCATCCCAACATTAAAA
CATTGAATTATGCTCCAGGACCTCTAGATACTGCAATGGGACAGGATATG
AAAAACAAACATGGCTCAGATGACACGAGACAGTTTTTTAATCATTTGTT
TGAATCTAGAACCATCATCAACCCTGATGATTCAGCTGGGAAACTAATGG
GTTTGCTGGAAAAAATGGATTTTGAATCTGGTGCTCACATAGACTACTAT
GATGTATAATTTTATTTAGAAGATTAATAAAAGATTAAAGTTATATTTAT
ATGTCAATAATTCAATTCTTATCATTTACATAAAGACTTTTCGAGGGGCA
CAGCAATATAAGAAGAGTCCTTTCTGGAGGAGGGActttaagttttttaa
tttgCTGTGGTATTGTTTATCTGTTTAATTAATGATCTTCTCCTATAAAG
AATAAAGAGAAAATTCCAAAATCTTATTATTAGCAATGTTGTtataagaa
ataagaatttctgtcctaCTAATAATAGTTTGGGTGGCACTCCACATTGC
ACTACTCATCAT Run BLAST on NCBI transcript from alignment at scaffold_15:10146..19935+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048960 ID=TCONS_00048960|Name=TCONS_00048960|organism=Clytia hemisphaerica|type=transcript|length=9790bp|location=Sequence derived from alignment at scaffold_15:10146..19935+ (Clytia hemisphaerica)
caacTGGCAACCTCAAGACCTCCAAAGTGTCATTTTCAAACGAAACATAC
AGCAATTTTAATGACAAAGGCTTAAAAAACAGGTAACAGGAAGAATCCAA
ATGTAAGTATGGTGTTGTTAGTTAAATCAGAACAAATTCTCCTAATCATG
AAAGTGTTTGGGGCCATttgccattcaaaaagtacgttcgtcgCCGCGCC
GAACGTCGTCGAGGagagggggggagggggtcagtAAAAAAGCAAACGAA
AACAAACAGGGGGGAGGGGgcagaggtgccaactctcacgcattggacGT
GAGACTCACGCATTCCAACACTGTCTcacgcaatttttcaaaagtttgat
ttctcacgcatttttgatccagacggtactaatcgaacgCTTCGATTACG
GAAGTAATCGAAGAtaatcgaagtaatcgaatgattatttatcgattact
gcTTTCGATGACAGGTAATCGAACGCATTCGATTACAATAATCGAATGCA
TTCGATCACTGAAATTTCGTAAATTGGGTGAGTATTCGATTACCCGTTCG
ATTACTTTTCAATGACCCttcgatgacgttcgataacCCTTTGATGACTT
CGATGACCCTTCGATGACTTCGATGACGTTCGAAAACCCTTCGATGACTT
TGATAACGCttcgatgacgttcgataacCCTTCAATGACTTTGATTATTG
AAAATTATTCGATTATCTTCGACAGTCagcaaatccttgcatttgcacgg
ggtgtGCAGTTTTCCCGACCCTGTGCAATGAGCTAGAACGCGTCAGGCAA
ATACgtcaatttcaactttaaagtgaaaacgggggaaaatgaagatgagc
ggggctttcattttttctttacgaGATTCTTCATTCGTTAATAAAGAATT
GTGTCCATTGAAAAAAGATTCCacccattcaatcttttttaatcAAGCAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGTAAGTA
CGGTAATTTTTCGAAGTACAATCCAATAGTTCCCTTAACAATTAAAAGCG
CCAAAGTTGTAAAATCGTGGCTTTACCCCAGCTATCtgaatttttgcgat
tttggatTGTAAGGGAACTACTGTATTGTTGAACTTATAATAGGTAAGTA
CGATAGTTTGTTTACTGTGTTTTCGGTGGTTGTACCTGTCAATTTCCATT
CTTCTCAGTCGCTCAGTCTATATACATGCCGATACTAATGTTTTTTGAGC
TACCAAGTTACCTAAAacggaaaaaaaatattgaaaccttATTTTGTGTA
GAAGAGATACGGGTAAGAACCCAAAAATAGCTGTTGCGTTAAGTATCGAA
TTAAAAAGGAGTTGAAATCATATCACGGCCCTGAAATAGACAAAGATTGT
GACTCAAGTTATAGTCAAAAAcccaagaaaaatgaaagaatcaAGTTGAA
AAACTCTAGAATCAAAACTATGACTATCATCAGGTTCGAGTCGTCGCTCA
GGTCAGAACGGCAGTCACGTCGCAAAGTAAGAGTAGTGCAAAGGTGCTTC
ACTAGAGAACGTGGAGAAGAGTGCAGGGGTTGATTCTCAGGAAATCTTTA
TTCTTTATCAATTTTCTGTTTAACTTCTGTGTAATTTTTACACCTTCCTT
TCAACGCAAAATTAACGCGGTCAACCAGATCAGATCCCACATTCGCAGAA
CGGAGCACGGGTGTGTGCAGAATGATCCGTTCCCAGcagacacacaacgt
tgttttaacgtccatctaacgttatatggacgttagataaacgttgaaac
aacgtgccagctgggttattaGAGTACGATTTCGCCCTACCCAGGCTCTC
CCGTGTGCACAGTACAACGTACGGCCTGGTTCgattaaaattttctgttg
AAATAAACGAGGGAATAAAGAGATCGAAGCCTTCCATGACTAGTCGAAGT
AATCGAATGGTAATCGAATGGTAATCGAAGTAATCTAATAAATCTTACAA
ACCGATAGTATATCGAATTAATCGAAGagtaatcgaattaatcgaagaGT
CATCGAAGGGTCATCAAACGTTCATCGAACGGTAATCGAAGAAGATGCAG
ATATTCTGAGGCTGGTGAGTATTcgattatttcaaaatttcggcGTAATC
GATAAGTCATCATTCGATGACGTTCGATTAtattcgattattatcgatta
caatcgaacgttcggaacattcgattagtaccgtctggtttgatatttga
aagaaatttccccgattttccgatgATTTTCCGaataaatttccccgatt
ttctgatttttgggaaaatttttttcctgattttccgattttcggaataa
atttccctgattttccgattttttggaaaaatttttctgttttcCGAAGT
CGTAAAACCGGAAAAATTGGGCTAAGATTTTGgattttccttcgaaattt
ttatctcatgcCAAATGCAAATGAACATCTTAAGTTGGCAGGTCTGGGGG
GTCAATTCGATCTGTGTACGTTCGCTTTTGCGAGGGGGGGGTGCTTGTCA
CAAGCGTGACTTTTAACTTATAGtctatgaaaaatctttttctatctatc
tcctaattatatacattttttctttgaatcgaTAACCGCAAAGATAATTG
TTAATCCCCTAAACAATTGTGTATGTTATAATTGTTTAGCAATTATTAGA
TAATTAGAGAGCAAAAACTTAAGGTGCGATAAGATTAAAGAATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAATGAAAGTTAC
CTTTTCAacataatcttacaatagacagagGGTGAAAGTTTAAACAATGC
TCAACcgtcaagaaatatttttgctctcagTTTTAACAATTATAATCGAA
AAGAACATATTGGCGAACAATATGTTTTGCGCACCATAATGTACGAAACA
AAAAACGGGTGCTCTATTacgagaaagaattttcttttggtaaacaattc
ccctattGATTCAGGTTGAAAAAGAGAGAAAGTACAGAGGCTGAATGCAC
gtggctttcactttcttttaatcTATGTACTATGActgaatttaaattga
aaagagaaaGGGATCATAGTATAATCAGGAAAATTGCgtaaaatataatt
tgtataatcttacataaatgattttttttttaaataaataaagtttcagc
gaatgaaagtttgtaaattgcctaaatattttatcatgattagcacaatt
acgcatgaattaatCTATTTTATGCACTTTGGATCATGAATTGTGTATCA
TAGAttgttagatcgtgcatcttaaattacaccaaccagcaaaatggcaa
tgccccaGCCATTCTAATTCGCGTCAGCATAGCCGAATGCCGACGCAAAT
GCCGACGCAAATGCCGACgtaaatttgactaaaaattgCTGACGTAAAAG
TGCTTACTGTACTATAAAACCCAGAATTTTTTGCTGACGCAAATAAATCT
GAATTAGAAAGGCTGCCCAAAATATGACAAAGCttgattttcccaaaata
atttttgggcaaatttgggcaaaaatcAGTTGTGCAAAATAGTTTCACTA
agtctttttctgatttttggtagaaagatagagttctctaaaaagtggct
ggagtgatttttcccgaaaaaaatttaccttgaaatacacattttaattt
ttttcctgatATGTATCTCATGTTATCTCATGATTGGAAGCTGCTATGAA
TCAGTCACCTGATTTACTGGTATTTTACAAACCAGAATCTATTATTTACT
CACTTACTTCTTCTGACTAGCTCGTGTTTGCAGATGCCAACATTGAGGGG
TTAGGTTTCTTTTTTTCAAGACCTATGTAGAACTCGTCTGCTGACCGACC
ATCAAGCACGTGATCTTTGAGTGTTTTGATTGGTCGGCCTCTTTTCTTGT
TACCGTTGTTGTTGAAAAACAGTCTTTTGACAATGCTGGTGTTCTTTTGT
CTTGCAATATGGCCAAGAAAATTTTGCTGCTGTCATTTGACATATTGAAG
GATGTCTTCAGTTATGCAAACGCGTAGAACATCTTCACTTGACATGACAA
AGTGGAAAGTTTGTTCATTGTTTTCATTGATTCTTCTTTCAAAGCTGCCT
ATCACCATCTCATGAAGTATATTAACGTAGGTGTATCGGATTATTAAAGG
GTTTTGTTTAATGCTTGATAGCTAAATCAACCTCCCAgcctttttaaata
atatgacaAATTTGGGAAGTGCTATgaacttgttttatttttcagtctgt
ttcttattattattgtaatttttcatattttcttattaaatcaatcttca
ggtaggtccattcagcatgtagcttgttctatttgcttttttaaaatttt
taaggttATGTTTAATGTCAGTAATGCTGATTGCTGACTTGAAATATGAG
GACTATTTGGTTTGTTTGCATTTCTTGTAggtaaaaaaatgttatttggA
GGAAAAGTGCTCTGTTTTGTGACAGGTGCTAGTAGTGGATTTGGTCGCTC
AATATCTAGGTTGCTTCTTTGTCAGAATGGTCTGCTATCAAAAGCTCAAG
TGGGCTCTCAAATTATCCTGATGTCAAGAAATCTTGATCAATTGAAGGAG
ACTCAGAGGTTAATGGAAGATGGATCTACAAACAGTGAACATTTTttaat
ccaatgtgaaaagctGGATCTTAGCGATACAAATGCTgttgaaattaaat
ttcctgATCTGCTTATGTCTTTAACAGGAGAATTTGATCATGTCTTATTT
TTCAATAATGCTGGTTCAATTGCTGATGTTTCTAAACCTATCTTAGACTA
TCAATGGAGTATACAGGATTACACAAAATATTTCAACCTATCAATTATTT
CTTCCATTTACATGATTAATGCCNTAAACCTATCTTAGACTATCAATGGA
GTATACAGGATTACACAAAATATTTCAACCTATCAATTATTTCTTCCATT
TACATGATTAATGCCATGATTCATAAATTTTCTCTCCATCCCTCAAAAAT
TGTAATTATCCAAACATCAAGTCTTGCAGCTGTTCAAGAAATGGCGTATA
TGCCATTATATTGTGCTGCAAAAACATCAATGGATATGTTCATAAAATGT
GTTACCAAGGATCATCCCAACATTAAAACATTGAATTATGCTCCAGGACC
TCTAGATACTGCAATGGGACAGGATATGAAAAACAAACATGGCTCAGATG
ACACGAGACAGTTTTTTAATCATTTGTTTGAATCTAGAACCATCATCAAC
CCTGATGATTCAGCTGGGAAACTAATGGGTTTGCTGGAAAAAATGGATTT
TGAATCTGGTGCTCACATAGACTACTATGATGTATAATTTTATTTAGAAG
ATTAATAAAAGATTAAAGTTATATTTATATGTCAATAATTCAATTCTTAT
CATTTACATAAAGACTTTTCGAGGGGCACAGCAATATAAGAAGAGTCCTT
TCTGGAGGAGGGActttaagttttttaatttgCTGTGGTATTGTTTATCT
GTTTAATTAATGATCTTCTCCTATAAAGAATAAAGAGAAAATTCCAAAAT
CTTATTATTAGCAATGTTGTtataagaaataagaatttctgtcctaCTAA
TAATAGTTTGGGTGGCACTCCACATTGCACTACTCATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048960-exon-scaffold_15-1491911889:10146..10247 | TCONS_00048960-exon-scaffold_15-1491911889:10146..10247 | Clytia hemisphaerica | exon |
| TCONS_00048960-exon-scaffold_15-1510915933:10146..10247 | TCONS_00048960-exon-scaffold_15-1510915933:10146..10247 | Clytia hemisphaerica | exon |
| TCONS_00048960-exon-scaffold_15-1575043694:10146..10247 | TCONS_00048960-exon-scaffold_15-1575043694:10146..10247 | Clytia hemisphaerica | exon |
| TCONS_00048960-exon-scaffold_15-1491911889:18726..19935 | TCONS_00048960-exon-scaffold_15-1491911889:18726..19935 | Clytia hemisphaerica | exon |
| TCONS_00048960-exon-scaffold_15-1510915933:18726..19935 | TCONS_00048960-exon-scaffold_15-1510915933:18726..19935 | Clytia hemisphaerica | exon |
| TCONS_00048960-exon-scaffold_15-1575043694:18726..19935 | TCONS_00048960-exon-scaffold_15-1575043694:18726..19935 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:10146..19935 + |
Blast
BLAST of TCONS_00048960 vs. Swiss-Prot (Human)
Match: SPRE (Sepiapterin reductase OS=Homo sapiens GN=SPR PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.319e-25 Identity = 60/173 (34.68%), Postives = 91/173 (52.60%), Query Frame = 2
Query: 488 GLHKIFQPINYFFHLHD*CXKPILDYQWSIQDYTKYFNLSIISSIYMINAMIHKFSLHPS-KIVIIQTSSLAAVQEMAYMPLYCAAKTSMDMFIKCVTKDHPNIKTLNYAPGPLDTAMGQDMKNKHGSDDTRQFFNHLFESRTIINPDDSAGKLMGLLEKMDFESGAHIDYYD 1003
GL ++ IN L D K +D S Q Y+ L++ S + + ++++ F P ++ SSL A+Q LYCA K + DM + + + PN++ LNYAPGPLDT M Q + D R+ L +++ SA KL+ LLEK +F+SGAH+D+YD
Sbjct: 91 GLQRLLL-INNAGSLGD-VSKGFVDLSDSTQ-VNNYWALNLTSMLCLTSSVLKAFPDSPGLNRTVVNISSLCALQPFKGWALYCAGKAARDMLFQVLALEEPNVRVLNYAPGPLDTDMQQLARETSVDPDMRKGLQELKAKGKLVDCKVSAQKLLSLLEKDEFKSGAHVDFYD 260
The following BLAST results are available for this feature:
|
