TCONS_00049461 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049461
Unique NameTCONS_00049461
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3097

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049461 ID=TCONS_00049461|Name=TCONS_00049461|organism=Clytia hemisphaerica|type=transcript|length=3097bp
ATTTGATAAATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAA
AAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGAC
TTTCAGCGTGGTTTGGAGGAgcagagagaaaaaaagaaaagACATTAAAA
GAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAATGCTGAGTTT
AGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGG
GAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTG
GTAAGGTGATTTCAACGGCCAACGGCGACAAAGAGTCAGTTCATGTGCGC
ATAAAGCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACACCTTCG
ACAGCCTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTTATCTGA
GACAACCACAAACCAACCCTTATCTTAGACAACCTCGACCTGATCCACGA
TATGCACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGAG
TCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTATC
AGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCA
AACCAGCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAGACCTGG
ACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCAC
CAACAAGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCTGGCAGG
AGAATCAACATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGCTTCAC
TTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACCAGATA
ATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCTACATC
AATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACGAGTGT
AGATGCACGAATTACTTCACCCAACTTACGAGCAGAGCCAGTGAAGCGCG
ATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAATCA
ATGCTGGACCACCATGGTGAACAGAAAGTCATGAATTACACCATCATGCT
CATGAATTCGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGCGCCCA
TCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGTCGTAT
TACCGTATCGTGACCAATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCG
GTATTCAAGAGAAGTTGCTCAACGTAACAACTCGGTGGATTTTCATCTCA
TCTTGACAAGggaGGATATTGGACCAGCAGGGTTTGCAGCTATGTATACA
ATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCCGACAC
TTCTTTCGTCATCACTCATGAACTTGCACACGCTTTGGGTATCGATCATG
ACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATATTATG
GTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAATGTAG
TGCGAAAAtgatttggcaaaatttgaaATACTTCACGTGTTTAAAGAACA
AACCAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCAGGG
GAGCTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTCCGC
TCTTCCTTGCACACCCAGGAATCCATTGACGGCGTGCAGATATTTATGGT
GTCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTCCT
TTGGAAGGCTCAACGTGTGCCAAATCAAAGTGGTGCAAAAGAGGGCGTTG
TGTGACCAAGATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATT
CGGAATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAA
CATCGAAACAGAAGTTGCACCAATCCCAAGCCGAGGTTATCAGGGAAGAA
ATGTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATG
GGATTTGCAAGCCTTTCAACATGCGACAATTGCTCTTAAGCGGAGAAATC
GATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGAATGATAACGT
CACTAAATGGAGAGTTTATCGAGAAAGCGAGCAACGTAGACAAGTAAAGT
CGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAAT
TCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTC
ACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGGA
AATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGG
AGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAGT
GTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAG
AAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAA
GGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAA
CATCGAGTATAAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACG
GAGATATAGCAATTgatgatattcaattttcttacGGGCTGTGTAATGCA
AAGTCAAGTCAAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCA
AGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTA
AATtaccaaaatcgaaaaataatgTTTGCTTTAGACAAGTTTGTCAGccc
GTTAACTGTCATGGTGTTATAAATGGCCGAAAATGCTGACgttacaaaaa
tgatttttgagaaaatttaatgTATTTAATCagttttatttgtaaaactt
atatttttatgaaagaGAATAGAAAAAGTTTAGACCTGAATAGAACGCTG
GAAATATAAATAATATACTGTACATCATTGACCACAAAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..144946-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049461 ID=TCONS_00049461|Name=TCONS_00049461|organism=Clytia hemisphaerica|type=transcript|length=9545bp|location=Sequence derived from alignment at scaffold_159:135402..144946- (Clytia hemisphaerica)
ATTTGATAAATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAA
AAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGAC
TTTCAGCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAAGGTGAAAGGA
TTTTTTTGCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGTA
TTTTCGTTTCAACAAGTGATATTATTTATTATTGTACCATGAGCAAGTTG
TTCGGGATTCAATGTAAGATGACTCTTTTGCAAAACATCAATCACTTCTC
ATGTCATACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTT
TTGAAAAATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTC
GAGATTTTTATTGGCAATTCAGTGGTTTCGAAGTTAATGATTCTAATTAT
TGTGTAACACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAAT
ATTTGGTCTTTGGTTTATGAACATTATTCCACCAAATGCTGAGTTTAGAA
TAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGAGGA
TGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGTA
AGTTTCATCTACACTGTATTTCACTGTATATCATGTNGTTTTAGGCTGAA
AGCTGAAATACAGATATAGCTGACCAGGAACAGACCCAATGGTATGCAGT
ACTCATTTTGTCTTGTGCAAAACAAATACAAACAGAAGAAGATAATCTCC
AAGTCTCCGAATGTTTACACTCACCCAAAATAAAGCTCAAAGAAATTATT
GTACTTGATTGATATCACGGTGAGAAGTTGGAAAAGCCATGCTAAAAGAC
ACGAAAATGGTGATGGAAATACGCGTTAACAAAGATAAGTAACGCTTAAT
AAACGCTGGCTGATTTGATAAATATTGACAATCACTTCAAACAAAGAATT
TCACACTCACAAAAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACAG
TTCCTTATTGACTTTCAGCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAA
AATGTGAAAGGATTTTTTTGCGAAGGGTTTGAGTCATGATAATAAAACGC
GTTTGTTGAGTATTTTCGTTTCAACAAGTGATATTATTTATTATTGTACC
ATGAGCAAGTTGTTCGGGATTCAATGTAAGATGATTCTTTTGCAAAACAT
CAATCACTTCTCATGTCATACTACACTGTGTACTACAAAAAAGAAAGCAA
GAAAAAAAAGTTTTGAAAAATTGATGTGTTGTTGAATTGAAAAAGCTGGA
AGTTTGAAACTCGAGATTTTTATTGGCAATTCAGTGGTTTCGAAGTTGAT
GATTCTAATTATTGTGTAAAACTTTCAACCTTGTTCCTTTCTTTCTTAGA
CATTAAAAGAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAATG
CTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCT
TTTTTTGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACA
TCTTTGTGGTGTAAGTTTCATCTACACTGTATTTCACTGTATATCATGTC
ACTTATTATTAAGTAGTATGTTTGAACGTTAATTAGTACAAATAACCTAA
AGTTTAGGCAACACTTTGTTTCTAAACAATTCACTTTATTTTAGAAGGTG
ATTTCAACGGCCAACGGCGACAAAGGTATGAGTCATTCCTAATACAAACT
TTATACTATGCTGCTTTCTATGACGGAAGGGTTTTTGCGGTGATGAATAT
TTTGTTCTTAAAACAAACAATAATGACACCCTTCATTTCATTTTTACAGA
GTCAGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAAC
TTCCACCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGA
CTTCCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAACC
TCGACCTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGTT
TTCCCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGA
CCTGACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCC
TAATCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAAC
CACCACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCAT
GGTTACCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCAT
CAACAAATCTGGCAGGAGAATCAACGTAAGTTTAACAACAAAGTCTTCTT
ATTCACCATTCAAAACGTGACCGAGATGAGCACGTAATTCCCTTTCCACC
TTCTTTCATTACAGATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGC
TTCACTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACC
AGATAATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCT
ACATCAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACG
AGTGTAGATGCACGAATTACTTCACGTAAGAAGGCTCTCTCAGTGGAAAC
AATTCAATATCTATTTAACAAGTAATTTGAAAAATATTTAGTGTACAGCA
ATTCTTCTCAAATATCTAATTTTAACTTTAATTCCTTGCAGCCAACTTAC
GAGCAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACA
CAGGTGGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGT
CATGAATTACACCATCATGCTCATGAATTCGGTACGTTAGAGTGCAAAAC
CTTCTTCAAAGTATAATGAAAATCTTAAGAAGGTGATTGTTACCATTTTT
CATCTTCATCTACAGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGC
GCCCATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGG
TCAGTACAACATATATTGTCTCAACACCACACACAGTACCAGACCCCTTC
ATTCACATTGTATTCTTCCCTTTCACATTTTCAGTCGTATTACCGTATCG
TGACCAATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAGA
GAAGTTGCTCAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAAG
GTATACATATTGCAGCATTTTCTCTAACCATTCATTATTTTACATCCCTA
CATCAATTTCTAATAATTGATCAAGGTATTTTCCTAAGATTTTCCAAACC
TTCTCTTCAATGGCAGATTTATATAAAAAGTTGTTTATTCCTTTTCCAAG
CTCTATCTCTTGAACTGGAGCAAGAATCATCATTTTTAAAAGAGATTTAT
TTTATTTTCAGGGAGGATATTGGACCAGCAGGTAAGTTGATTTCTTGAAA
AAATTCTCCACCAGTGATTTGCTTATATAGATTTTGTACTGCTCAAAAAC
CTTCTTCACTCAATTTTATCTTTCCAACACACACAGGGTTTGCAGCTATG
TATACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACC
CGACACTTCTTTCGTCATCACTCATGAACTTGCACACGCGTAAGTTATAC
AACAGAGATAGGAGATCTTTATTTATTAGCTGTTACCCGTTATATTTTCT
AACGTTGACCATGTCTACAACACTGTGTTTTCACACCTTGGTAAAGTTTA
AGCAACCGACACTAAGGTTTGCTGGCTGTTACTTATGATAATAGTTTCCC
GATTACCCGATTACCGTAATCCGTTTTTGTGATTCAGTTTGGGTATCGAT
CATGACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATAT
TATGGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAAT
GTAGTGCGAAAATGATTTGGCAAAATTTGAAGTAAGCAAATGTGTCAAAA
GAGAACTAATTTTATTGATGAATATTGCTTTGAAAGAGGTAAATAGAATA
AATACCGTAGATAACTAGATAAATAGCAATTTCTTTTTCCATTGTTTAGA
TACTTCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAA
AAGCATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTC
GAAGCTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGGTTTGTTCC
ATCATTTTTGTTTTTCATGTATTCTATAACAGATATACTCTACTAGAATC
GTAAGTTGACATAATTCGATGTGAACTCATCATCGAAGGACGATTTGTAG
TGTACTCTTTCACAATTTCAGAATCCATTGACGGCGTGCAGATATTTATG
GTGTCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTC
CTTTGGAAGGCTCAACGTGTGCCAAATCAAAGGTGAGATTTCTTTTGGAG
TTTATGTGTCTTATTTAAAGCTTACAGACAAAGAGGTAATTAATCATAAA
GTTTCTCATAAAAACATGAATTTATCGAACAATTTGTGGCTAATTTGGCT
AACCATCATCTCTTTTTGGACAGTGGTGCAAAAGAGGGCGTTGTGTGACC
AAGATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAATT
CACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAA
ACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAG
CTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCATA
CTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTC
AAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGATT
TGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGAA
AGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTTT
TTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACATA
CGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGT
TTATCGCGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTACG
TTCTTTCATTGGATTCGTCAATGTAAAACAACAATCTCCTTAAGAAAATG
AAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAGT
AAAGTCGTTAAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGA
AGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACG
CCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGAC
AGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTC
TGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCA
CAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTC
GTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTA
AGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCT
ATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTT
AAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTAT
TCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTTC
TTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTTT
CTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGAT
ATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTC
AAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTAT
TTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAA
TGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTC
TTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCA
AGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTA
AATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTA
AATAAACATTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAGATCAAACCAGTTAACGGTGGGTGGTCCAAGTATTC
GGAATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAAC
ATCGAAACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCT
TCGAAGCTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACT
ATCATACTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGA
AATGTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAAT
GGGATTTGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACA
AGAGAAAGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATC
ACCTTTTTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAA
AACATACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATG
GAGAGTTTATCGAGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGT
TTTACGTTCTTTCATTGGATTCGTCAATGTAAAACATCAATCCCCTTAAG
AAAATGAAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTT
TGCAGTAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCG
GATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGA
GCAACGCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGAC
CAAGACAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCA
CCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTC
TCATCACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGT
TGGCTCGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGT
GGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAA
CTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACT
CACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTAC
CATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCT
CCTTTCTTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCT
CTGTTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTAC
GGAGATATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGC
AAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATG
AAGTATTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAG
CTTAAATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTT
TTCTTCTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTAT
TACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATC
CCTGTAAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGT
CAGGTAAATAAACATTTTATTNGAAATACACATTCGAAGGGGCAAGCATT
CACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAA
GCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAAC
AATATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGT
TGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTC
AGAATACTTGCTCCTTTCTTGATGATGAAAAGAAGGAATTACCGACCATG
ACCAATATATCTCAATATGTTTCTTATTAGATCACGATCGAAGCAGTGCG
TGGTAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCTT
ACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAA
GTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAATAAG
TCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTACCT
GTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGATCT
GTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGA
CTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGTTTG
CTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTGCAAATGATCCAG
ATAAAGGTATTGAACCGCATTGAATATCTTTAATCTTTATTCTCATTCAC
CAAAGAATGAGAGATAATGACAATTTATCATTCTTAATTTTTCAGCCCGT
TAACTGTCATGGTGTTATAAATGGCCGAAAATGCTGACGTTACAAAAATG
ATTTTTGAGAAAATTTAATGTATTTAATCAGTTTTATTTGTAAAACTTAT
ATTTTTATGAAAGAGAATAGAAAAAGTTTAGACCTGAATAGAACGCTGGA
AATATAAATAATATACTGTACATCATTGACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049461-exon-scaffold_159-1575043694:144806..144946TCONS_00049461-exon-scaffold_159-1575043694:144806..144946Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:143337..143497TCONS_00049461-exon-scaffold_159-1575043694:143337..143497Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:143172..143202TCONS_00049461-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:142572..143047TCONS_00049461-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:142272..142482TCONS_00049461-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:142016..142155TCONS_00049461-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:141848..141931TCONS_00049461-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:141647..141762TCONS_00049461-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:141416..141435TCONS_00049461-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:141208..141310TCONS_00049461-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:140866..141009TCONS_00049461-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:140606..140747TCONS_00049461-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:140365..140475TCONS_00049461-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:140075..140223TCONS_00049461-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:137764..137866TCONS_00049461-exon-scaffold_159-1575043694:137764..137866Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:137562..137673TCONS_00049461-exon-scaffold_159-1575043694:137562..137673Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:137023..137441TCONS_00049461-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:136017..136116TCONS_00049461-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:135728..135861TCONS_00049461-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1575043694:135402..135601TCONS_00049461-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:144806..144946TCONS_00049461-exon-scaffold_159-1510915933:144806..144946Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:143337..143497TCONS_00049461-exon-scaffold_159-1510915933:143337..143497Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:143172..143202TCONS_00049461-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:142572..143047TCONS_00049461-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:142272..142482TCONS_00049461-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:142016..142155TCONS_00049461-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:141848..141931TCONS_00049461-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:141647..141762TCONS_00049461-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:141416..141435TCONS_00049461-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:141208..141310TCONS_00049461-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:140866..141009TCONS_00049461-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:140606..140747TCONS_00049461-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:140365..140475TCONS_00049461-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:140075..140223TCONS_00049461-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:137764..137866TCONS_00049461-exon-scaffold_159-1510915933:137764..137866Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:137562..137673TCONS_00049461-exon-scaffold_159-1510915933:137562..137673Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:137023..137441TCONS_00049461-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:136017..136116TCONS_00049461-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:135728..135861TCONS_00049461-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1510915933:135402..135601TCONS_00049461-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:144806..144946TCONS_00049461-exon-scaffold_159-1491911889:144806..144946Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:143337..143497TCONS_00049461-exon-scaffold_159-1491911889:143337..143497Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:143172..143202TCONS_00049461-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:142572..143047TCONS_00049461-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:142272..142482TCONS_00049461-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:142016..142155TCONS_00049461-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:141848..141931TCONS_00049461-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:141647..141762TCONS_00049461-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:141416..141435TCONS_00049461-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:141208..141310TCONS_00049461-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:140866..141009TCONS_00049461-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:140606..140747TCONS_00049461-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:140365..140475TCONS_00049461-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:140075..140223TCONS_00049461-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:137764..137866TCONS_00049461-exon-scaffold_159-1491911889:137764..137866Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:137562..137673TCONS_00049461-exon-scaffold_159-1491911889:137562..137673Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:137023..137441TCONS_00049461-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:136017..136116TCONS_00049461-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:135728..135861TCONS_00049461-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049461-exon-scaffold_159-1491911889:135402..135601TCONS_00049461-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..144946 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0002105	0	0	0.000219298	0	0.00133542	0.000405416	2.5509e-10	0.903413	0.150394	1.95274e-06	7.84119e-05	1.19266e-10	0.000115448	0.723928	2.04375	0.000175847	0.697714	0	0	0.000112108	0.000920462	0	2.42913e-10	0	2.02242e-09
Blast
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BLAST of TCONS_00049461 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.200e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 3 
Query: 1113 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 2081
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049461 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS142.200e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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