TCONS_00049587 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049587
Unique NameTCONS_00049587
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2896

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049587 ID=TCONS_00049587|Name=TCONS_00049587|organism=Clytia hemisphaerica|type=transcript|length=2896bp
TAGACTTATTCAAATTAGAAAATTGCCTTATCGCCATATTCGCCAAAAGT
GTGCACTATGGTTGAATAAGCTTTTCAGAGCTAGAATACACGTCAACCAG
ACCACACTCTGACACTGGTTAAGGAAGGTTTGACCATTAAAGACAGGTAG
GGGTTTAAGAATACTTTATGGTACAATTTCATTGAGTGTTTCTGTCATAG
ACATTTTCGGTCCAGAAATCGGTCCTTTTAAGggctttaatttttgaaaa
gtttgtcaAGTGCTTCGACACCTTTAATCCTCTCAAGTGATCCATGGTGT
ACGCGTAAACCACTGCGAAAGAAATTAACTTTTCATTCCCTCAGAATTCA
TCTCATTACATCTTATACAGcgtaaaagaaaagtgtcaaggCATTTCGAG
TTCAACGCAAGTAAACTTGTGCAGACTATGGAGTCATTTAAATTCCTGTT
TATTACAGTGATGTGAGTGTTATATGATGATTCGCTGGAAAATCAGAGAG
TGAAAAATGATGCTAACTTGAACATATAAAACACTATAACGCTGAGAAGC
TACTTTATTCACCATGAAGGACCTCTATCACAACATTTTATACATTGCTA
TAATTGTGGTTGTAATGTTGGATTTAGCCTGTGCTCGAGCATCAAGTAAC
GAATGCAGTCTTTCATCAGAAGCTAAAAATAAACATTTGTTCAAACAGTT
CAGAGAGATCCAAACGGAATACTATACCCTACAACCATATCTTATCGCAT
CCAACTTAGAATATGATGGATCACATGTTAAAATGCAGTATGCCCCATAC
TTACCAACTCCTGAAAACTTGGAGCGCATTGCCAATAAATCTGCACACCT
TTTAAACAAACTGGAACATTGGAATGGTGCCAGATCCGAGTTAAAACCTC
GAGAAGAACGGCTTATACAtcaattcaaatatttcttaaaatcaaacttt
gattCCATATATGAAGGTTATTATGATGGAATGTGGATGCTTGGCCCAGA
CTACTTTTGTGAACAGCCTATATGTTACGCTCTTGAGTATTTCCATCAAG
CCTTACAAAGGATGTTAGAAATTGACGGGTCTATTTTGACTTTAACTGAT
ATGCGTAACATGATCTCCCTAGTTAAAGAACATCGTAAAACATTCGAACA
AtatctgaaaaatatgaaaaacggTGTAAATAGCGGAATGGTATGGAGTG
AAGAAGTCTGTAAAGCAAGCTCTAAAACGTTCCGTAAAATATACAGGGAT
GTTCGCACTAAACCGGAAGGTATTCTTAAAATGAAGTTTGCGAAAGTCTT
AATGAATGGTATACGAACTCAAAAGGGTTTATATAAAAAGCTTGGTGGTC
CAGAATTGGAACAGTTCAGAATAGACCATGGAGATTATGAGACTCAACTG
AACAAAACAATTATTGAATATATTGGAAAGCCTGTTCATGATCTGATAAA
GTATATGAAAGATGAACACATTCAACACTGCCCACCTAGTAGCATTTCAA
GTGGCCTAGGATCGTTACCCTTGAAATATGTTTACAAAAATGGACAAATT
GACGgGGATGCAACACAAAAGTTACCAGGGACGAAAACACCTATCAACGT
TACAGCTGGTTACAAAAGATTATTGGCGTATTACACTTCAGGAAATTACA
CAGGAGACAATGCATTTGAAGTGGGTACTAAACTGGCTGATTCATATTAC
AAAGAGGTTGAAGAACTAGCCATGGAAATTACTGACATTGACAATAAAAA
AGAAGCAATCACTGAATTGAAGAAACGATTGAAATCCAAGGATTTCATCT
TCAATAAAGAGCCTTTTCCAGAAAGTGAATCTGATGACGAAGCTCACGAA
AAATGTGATTCGGAAGAGGatGCCAAGTTAAATTGTCCTAAACGATGGAA
AGCATTCGAGGCTTGGAAAAATAACAATACGGAAATTTTGAAGGAAGCAT
CAAGTAgaatcaaaaatttgttttataccGAAGGGGCTAACAAAACAACC
CCCGATTGTAAAGTCCAAATTGTTCCTGATTATGATCCAACGAATGGTGT
TCCGAGTTATTTAGAAAGTGATCCTGATTGTGACGAACCGGCTGAATATT
TTTTACcgttctttaaaaacaaaatgggACCTTCATTTGATGATTATAAT
ACAAATTTTCATGAAGCAAGACCGGGCCATCATTTACAGATTCAAGGTTA
TTTGGAGAATTTTATGGACGAATGCGAAGACATTTCAATGTGGATAAACA
ACTTGGTCGATTATTATCCATCGTTCTCAGAAGGTTGGGGTTTATACTCT
GAAAATCCAATCTTACTGAAAGATGTTAACCTATTGGAGGACAAGTTGTA
CCCGAAATATGGCGCCCTAAAATGGCAGATTTGGAGAGCACTGCGCCTGG
TGGCTGATGTTGGTTTTCATCAGCGTGGTATCTCACGTGACGAAAtctta
aagaaatttcaaaaatacacaTGGGACACTTCAGACACCGTTGAAAAAGA
ATTAACACGCTACCAAGgaACACCGGGTCAGGCCACCTCATATACACTTG
GTCAACAGACCATTTTAAAGTTACGTAATTATACACGTCAGCAACTTGGG
AGCAAATTCGACATTCGCGAATTTCATTACGCCCTTTTATCCGTTGGACA
AGCGCCATTTGATTACATCAAACTTCACTTGGAAAATTACGTTAAATGTA
AAAATGGAAACCACAAAGACTTTAAATTTTGTGACCTCGTTTTGAATTCG
GACAGTGGCTCACGAAAACGAGGCTACATGATCAACGACCCCGTCAAAAT
CAAAAGACAGACATTaatcaaaaaattctcaagAACTACCAGAAAATACA
AGCATTTATagctttttatatattttcatcttcatttatttttttt
Run BLAST on NCBI

transcript from alignment at scaffold_161:42163..58896-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049587 ID=TCONS_00049587|Name=TCONS_00049587|organism=Clytia hemisphaerica|type=transcript|length=16734bp|location=Sequence derived from alignment at scaffold_161:42163..58896- (Clytia hemisphaerica)
TAGACTTATTCAAATTAGAAAATTGCCTTATCGCCATATTCGCCAAAAGT
GTGCACTATGGTTGAATAAGCTTTTCAGAGCTAGAATACACGTCAACCAG
ACCACACTCTGACACTGGTTAAGGAAGGTTTGACCATTAAAGACAGGTAG
GGGTTTAAGAATACTTTATGGTACAATTTCATTGAGTGTTTCTGTCATAG
ACATTTTCGGTCCAGAAATCGGTCCTTTTAAGGGCTTTAATTTTTGAAAA
GTTTGTCAAGTGCTTCGACACCTTTAATCCTCTCAAGTGATCCATGGTGT
ACGCGTAAACCACTGCGAAAGAAATTAACTTTTCATTCCCTCAGAATTCA
TCTCATTACATCTTATACAGCGTAAAAGAAAAGTGTCAAGGCATTTCGAG
TTCAACGCAAGTAAACTTGTGCAGACTATGGAGTCATTTAAATTCCTGTT
TATTACAGTGATGTGAGTGTTATATGATGGTAAGATAGTTGTTTTTACCA
TGCCTGAATATAGTTGTCTTGTTTGCTAGACTAGTAAACTCAGAATTATT
CGAAACAGTTTGCACGAAATGTCAATACCGGATGTTTTAGTGTAAAATAC
AACAAATACATTTATATTTTTATGAAATCTGGTGGGGTGAAAACATCATC
AGACAAAAAAATCTAAATTTTTAGTATCTGTAACTAATTTTCGCGGGAAA
ATTAGTCTATCAATGATCTATTCTAATCTATTCTATACATTTTAGAATTT
TCGAACGCTTTTGTTATCCAAAAATCCCTGTTAATTAGCCATTCAGAAGA
TGTGTATACATAATTGATGAAATCAACATGAATATCCTCAAAGTGAGTAA
AAAAACAAAACAAAACAAAAGATTCCAGTATTTTGATTGTTCGAATAATC
GAGGCGAACAATGAAATCGAATGCTTATCCAAATTGAGACCAAAACACTT
AATCTTGATTGGTTGAAAGTGCGGCTTTTTTTCGATTTAGGAAAACATTA
GATTTTTCATTTTCCAAATATCAGATTCGCTGGAAAATCAGAGAGTGAAA
AATGATGCTAACTTGAACATATAAAACACTATAACGCTGAGAAGGTAACA
TTGACTTCTATTTACAGCTTTATTAATTATTAGAGTGGTGAAATTACTCC
TTGTTGGTAGATAGAGTCGATATTTTACGTGGATAGGCGGACTTTTAGAC
AGTCTTTCGATTTTCGGGGTCCATTGCCAGTCGGCTCGGCTATTTATGAA
CTAAACGGAGCATTGGAAGGAGCGGGAATTCGAACCGCCAACTCCTGCTT
TGAGAAGGTGACGAGCTAGACCACTTAGTCATCGCTCCTGGTTGTGGTAA
AAATATTTATTCAGTCTTCGTTTGTTCTTTTGGAGAAAGCAGCCCCATTC
TGTTCAATAATCAAGTTGGAAGAACCCTTCCACACAAATCCCCTGAAAAT
TCTTCTTGGCTTGGAAATTTTCGTACTGCCCCTTCCCCTCCCCCTCCATG
TACTCCCTTACGGAACTTCCACGCGTTTTAAATGCATCGAATTTTTCATN
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CAAAACATGATAAACATGGATTAAAGATTTAAAATTGATGGCGAAATACT
GTACTGTCATCAGCGTGCCTTATTTTTGACGATTACGATCTTCATTTTAC
GGGTGCGATTTTGCGATAGCCGCATTCTTTTGTGGTAAATATGGTTTTAA
GATTAAAGATTACAAAAACGCTGGGTCTTTCACTTCACCACGGAAAAGGT
TAGCTTGAAATTGAAAGTTACACTGAAAGAAAGAACATGGGATTTCAATT
AAGTTTCAAGAATTTTGGTAACATTTTATTTGAAAGCTTGCGAAAAATCT
CCATTCTGCAATGAATTCAAATAGGTGAAAATGGAAATTTTTGGTAATCC
ATCCCTGTACCATTAATCATTCTACAGGGCCGGCGAATCGGTTTTAAAAG
TGAAGGGGCTAAATGATATAGTGACTAAGGAGGCCCCACCATGGTTGGGG
CCGAGGGGCCGGAAAATTTTTGAAATTATGGTACTCTAGATTGGCCTAGA
AGTGGTCTAAATTTAATTTTTGTGAAGTTATTGGAATGAAAAAATCAAAA
AAGTTAGGCGTTTTTTTATACTGATAATCACCAAAGAATATANNNNNNNN
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CAAGTTCAACGTAATCTTTTATTATACATTTATATGTAATTTAAAGTCTA
GAATTTAAATACATTTTGATACCCAATGAATTAGAAATTCATCAAAGTTT
TGAACGTAGAATTTTATTCTATTTTAATGCATTTTATATTCGTTTTCAAT
GGAATACGAGCATTTAGTTTCCGTAAGGGCTTCTATACGGATATATAATA
ATAATGACCTATTTTGCACAAGTTGAGGGAAGTTGGTTAAATATTACTTA
AGTATTAAGCTATTAAGGGCTCTGACCATAGTCCAAAAATTGATTTTCGT
ATTTGAACATACAAGTTATATTTCAGGTTCCTTAACACTTTTAACAAATA
ATTGCCTTTATAAATTGCTTTTTAATCGAATCCCTTAAGAGTAATTAAGA
ATTTAATTGCAAAAATGACGTTGTGAACTTTAAAAAGATGTTAATAATAT
GTTGCATCACCCTTTTTTACAAAAAATGCTTAGTTTTAATGGGTAATTAA
CTTTTTTGTTTCAAAATTTCTTAACACTGTCCGCAAAGAATTTAACTATT
TTAAATTTTGCGGAAAATTTTTCTAAAAAGATGTGTTAAAAGTTATGACT
ATTTTATTAAGCAAAATCCAGATAAAAAATTTATGAAAAACCACTATTTT
GAAGATTTCGAGACAAAGAAGCATTTACAAAAATTTTCCGCAAAAATTTT
TATTGTTCGGTAAAAGATACACCATCTACTACAAAAAATTTTTCAAAATT
TTTTTTCTTCGCCAAAACTAAGCTCTTCAAAGTTGAAATACTCTTCCTCA
CAAAAGTCTTCATTTTCTTCTTCATCAAATTTTTTCAATGCAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
CAGAAAATGTATAACATGCCATAGTTTTGTTGGTTACATCAGTCAGAAAA
CACATTTTAAACACGGTAATTATGAAAAATTCACTATGGTCAGAGCCCTT
AACTATTTTTGCAATAATTCTTGTTCCGACCCCCTGTTATTCTCTCATTG
TTTTCTATCAACCAACTACGTCTGAACTACCAACTAACACGTGCTTTTTG
CCTTCTTTTCAGCTACTTTATTCACCATGAAGGACCTCTATCACAACATT
TTATACATTGCTATAATTGTGGTTGTAATGTTGGATTTAGCCTGTGCTCG
AGCATCAAGTAACGAATGCAGTCTTTCATCAGAAGCTAAAAATAAACATT
TGTTCAAACAGTTCAGAGAGGTTTGATATTCACTTCTAACATTTGGGGCT
CAATTTGCCTTAAACATTTGAACTTAAACTATATTCTAATTCTGAGAGTA
AAACCCGGGAGTAAAATTCAAAACACTGTTGGTAAATTTCGGATTGGTTG
CTTAGCAGTTTCGAAATCGTACCTCAATTTTAGTTTGATTATTTTGTTAA
GCCTTTTGTTGTTCTCTTTAATGCTTTCTTGACTCATCTCAGCTTAACGC
GTTTTTGTTTCATTTACGTTTTTTTATAAGAAAGTCCGAAGTTTTTGAGG
TCTAATATGTTCTTAAGATGCATATTCACCTATTCTTATATTCATCATTT
GCGAATATGTTTTAGAGTCCGCAAAGCCTTACAATGTTCTTGACTTGTTC
TTGATATTTGGCCAGCGTTATGCTCTTTTAAAGTTTGTTCTTATAAAAAC
GTTTTCATTTAAGTATGCGTTATTCAATGTTAGACTAGGATTGTTGTTTG
TACCATTTTAGGAATTTAATTTTTTTTTTGACTCTATTTTTACAGATCCA
AACGGAATACTATACCCTACAACCATATCTTATCGCATCCAACTTAGAAT
ATGATGGATCACATGTTAAAATGCAGTATGCCCCATACTTACCAACTCCT
GAAAACTTGGAGCGCATTGCCAATAAATCTGCACACCTTTTAAACAAACT
GGAACATTGGAATGGTGCCAGATCCGAGTTAAAACCTCGAGAAGAACGGC
TTATACATCAATTCAAATATTTCTTAAAATCAAACTTTGATTCCATATAT
GAAGGTTATTATGATGGAATGTGGATGCTTGGCCCAGACTACTTTTGTGA
ACAGCCTATATGTTACGCTCTTGAGTATTTCCATCAAGCCTTACAAAGGA
TGTTAGAAATTGACGGGTCTATTTTGACTTTAACTGATATGCGTAACATG
ATCTCCCTAGTTAAAGAACATCGTAAAACATTCGAACAATATCTGAAAAA
TATGAAAAACGGTGTAAATAGCGGAATGGTATGGAGTGAAGAAGTCTGTA
AAGCAAGCTCTAAAACGTTCCGTAAAATATACAGGGATGTTCGCACTAAA
CCGGAAGGTATTCTTAAAATGAAGTTTGCGAAAGTCTTAATGAATGGTAT
ACGAACTCAAAAGGGTTTATATAAAAAGCTTGGTGGTCCAGAATTGGAAC
AGTTCAGAATAGACCATGGAGATTATGAGACTCAACTGAACAAAACAATT
ATTGAATATATTGGAAAGCCTGTTCATGATCTGATAAAGTATATGAAAGA
TGAACACATTCAACACTGCCCACCTAGTAGCATTTCAAGTGGCCTAGGAT
CGTTACCCTTGAAATATGTTTACAAAAATGGACAAATTGACGGGTAAGTT
TTTCTTTTCCAGCCGGTACTCACAGAAATCAAGAAATCATTCTTAACTTT
TTGAGGAAAATCATCCTAAAATATTTTTATGGTATTCTTACGCTAGGGTT
CCAAATCTAACCTATATATCTAACATGTAATACACACCTGAAGCATAAAA
TGGTATTTTTGTAAATCTTAGTGGGGGATAATTGTCAATTTACAGTTAAA
ATGCTCAAAAAAATAGCATTCTCATGGTTTAGTTGCCGGATTTCATGATG
GTGATATATTCAGTATATTCTTAATTTTTGGCATTTTTTGCCAATTTCAT
CATGAATATTCTTATAAAAAGAAAAGCGTCTACGACCATCAAAACGACGT
TCGAAATACTCTATCCTTTGTAGGGATGCAACACAAAAGTTACCAGGGAC
GAAAACACCTATCAACGTTACAGCTGGTTACAAAAGATTATTGGCGTATT
ACACTTCAGGAAATTACACAGGAGACAATGCATTTGAAGTGGGTACTAAA
CTGGCTGATTCATATTACAAAGAGGTAGGTTTATTATATAATATAACCAA
GGATAAGTAAGGTTACTCCGTATAAAAATTTTCTCTAGAAGCCTTTTATT
TCTTGCTGTTGTTAATATCGAACGGTAATCATAAAAACGATTTTGTCCGC
CGTCAGTTTTACTGGAATATGGTGAGTAGTTAGCACTGCATTTTTTCATT
TTTGATTCTAAACGAATATATGAGTATTAATCAGTGGCGTGGTGGGAAAA
TTTCTCTGGGGTGGCCAAGGCAATAACATGGCGCCCTTTTTAAAGGTTTT
TTGTTTTTGGCGCCCCTCTAAATTTATGAACACAAAAAAGAGAGTGTGCG
AGCGAAGCGAGTCAGAAATTTTGAGTTTTTGAGGTGATGAGGGGCGCCAT
TTTTGTTTTTTCATTTGTCAATCTTTCGATATGGGCGCCTGAAAAATCCC
TCTTGGCGCCCCTTATTTTTGGGCGCCCCTTCTCAAAAGGGCTCCGCTGG
GGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATTAATAC
CTGAAAACAAAATAGTCCACGGATATCATTATTTAGATATTATAAAAAAG
GAGGAAATTATTCTGTATGTGTCACACCGTCCAAAAGCTCGATAATAATT
TAAATTCAGACTTCAATAGTCTGGATTAAAATCTGAATTATAATATCAAA
AAGATACAAGAAGATGTGATGATAGTTATTTATGTGTATACACTGTTTTT
TTTATAAAAATAATGAGGCTCAAAATTTCCAAAAAGTAAGAACAATTTAA
GAACAATGCTGGGCCTGAAATTAAAAAGAACTTACTCTATTTCAATCAAT
TCAGAAGTCAAAGTACCGTAGGAAAATTGGGTATAATGCCTATAATACCT
CAATTATTGCACCCCATAAATAAGAACATGATAAGAATAATTTGAGGCTC
AAAGTGCCAAAAAATAAGAATGATAAGAGCAAAATTTTACTGGTTCTTAT
GAAAAAAAGTGTAATCTATAAAGGATCATTTTGGATTATGTTAAAACCAA
TTTATCTCCGGTATAATTTCTATCCACAGGTTGAAGAACTAGCCATGGAA
ATTACTGACATTGACAATAAAAAAGAAGCAATCACTGAATTGAAGAAACG
ATTGAAATCCAAGGATTTCATCTTCAATAAAGAGCCTTTTCCAGAAAGTG
AATCTGATGACGAAGCTCACGAAAAATGTGATTCGGAAGAGGGTAGGATC
TATTTTACAATTTCTCTAACACCGTTATGTTAACACAGCCAATAGTGTAG
TCTGTTGACCGAAATTTGGTCGAACTGGGGAGGCAATTTTTGAAATTGGC
AATTTTACCGCCTCCTACCTATTAAGAAAAAAGTTTTTCGAAAAATCTCG
CGATCGACGCGAGCACGTAAAGCTTTGGATAATTTTTTCTTCTATGACTA
AAAACTGCTGCTAATTTTGAGGTAAAAAAGCAAAGGGGCTTAAGTTGGCA
ATCCGTTTAAATGATATCAAAACCAGATAGTAATCACGAATTTTTCTTAT
CTTTAGATGCCAAGTTAAATTGTCCTAAACGATGGAAAGCATTCGAGGCT
TGGAAAAATAACAATACGGAAATTTTGAAGGAAGCATCAAGTAGAATCAA
AAATTTGTTTTATACCGAAGGGGCTAACAAAACAACCCCCGATTGTAAAG
TCCAAATTGTTCCTGATTATGATCCAACGAATGGTGAGTCATATCAAAGT
AGTGGCCATAGCCAACATCACAGATTTCTGTAAAGCCCGAAGGGCTAGAT
GACGCGCTTTAAGCTCTTCCAAGAAAAAAAAGTGAATACCGCTAAAAATA
TTGTTTCCTTTTGTTTTCGAAAATCTGCGAAGCTTCTGTTTTGTCAAGCA
CCGAAACTCTATTGTAATATCACGTGCTGTCGGTAGGATTTCCTATCGAA
ACACGGCACAGTCAAAGCACGACATCTCTAGCCACTCGGGTTTTATAAAT
ATGTGGCTGTTGTCTAAAGATATAGAATTTTGGAAGGATACAGATCCCTG
TGCCACAGATCGGATCCGGTGGGGCCCACTGGAAAATCTGGCAAAGATTT
CGTCTTTGGTGGAAAAAAAACTCTACAGTCTAATCCTCACTGGAAAATTG
ACTTTGATTTCATTCCCATCTGAAATTCAATGCAAAAAAAATTGCACCCT
AAAATCATCCCCACTTGATTTTTTGAGCTTGGAACAATAGAGTTTTTATC
CCCATTGGGGTTTTGATTGAAATTCTTATCCTCGCTGCGGGAAAAGATTC
AACCGGGGCTGTGAGACGGGTGTGTTTCGTCAAGGGCTTGAATAATGGTT
TTTAAGTTCATTAAGTCTCCCTGATTAATTTTTCATATTCACGATCAAAG
AAAATCTCAATGAAGTCAATCCCAATTTTTCGACTAACTTTTTTGGGGTT
TCGCCGCCCTCGTTTCTCGATATTTTGATCTTTATCTAGCACCTAGATGC
AGGAATTTTCATCCGACACGCTAAAGCTCTGAAGGTTGGGAAAATTTGCA
ACACCTGGAAGTTTTATATTACGGAATTTTGCGAGAGGATTTTGCAGTGG
GAGATCTGATAACCTATTCCTCGTAGTTGAACCATACTGGGGATGCGGCA
CATCAAAGGCTGACTATCAATCATCTCCGATGGGAAATTGGCTATTTAGT
GCCTTCCCACAAACCAAATTTTTTCTTTGTTTAAAACGCGATAAAAAGTG
GGTTTTGTCTAACAGGCTAGAAATTGGCCTGCTCCTTTAGATTTTTAGCG
TTGGTGGCCGCTATAATTCACCATCGGAATGCCAGATAGTTTTAATCTCA
ACATTCATGTATTCATTTTTTTAGGTGTTCCGAGTTATTTAGAAAGTGAT
CCTGATTGTGACGAACCGGCTGAATATTTTTTACCGTTCTTTAAAAACAA
AATGGGACCTTCATTTGATGATTATAATACAAATTTTCATGAAGCAAGAC
CGGGCCATCATTTACAGGTAAATCAAGGGTCTTGGCGAATTTCCCAGCTA
AAAGACCTGAAAATATTTAATTCAAAATTTTTTAATACTTAAGACTCATA
TATCATATAATCTAAACTTTTGCCAGGTTTTGCTGGAGTTAAGGGCTCTG
ACCATAGTCGGGAAATTGATTTTATGATTTGACATAAAAGTTATGTTTTA
GGTTCTTTAACACTTTCAACAAAGAATTACCTTTATAAATTGCTTTTTGA
TCAAATCCCTTCAGAGTAATTAAGAATTTAATTGCAGAAATGACGTTATG
AACTTTAAAAAGATGTTAATAATATGTTGCATCACCTTCTTTTATAAAAA
GTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTTTCAAAACTTCTTTAC
ACTGTCCGCAAAGAATTGAACTATTTTAAATTTTGCGGAAAATTTTTCTA
AAAAGATGTGTCAAAAGTTATGACTGTTTTTTTAAGCAAAATCCAGATGA
AAAATTGATGAAAACCCACTATTTTGAAGATTTCGAGACAAAGAAGCATT
TACAAAAATTTTCCGCAAAAATTTTTATTGTTCGGTGAAAGATACACTAT
CTACTGCGAAAATTTTTTCAAAATGTTTTTTCTTCGCCGAAACTAAGCTC
TTCAAAGTTGAAATACTCTTCCTCGCAAAAGTCTTCATTTTCTTCTTCAT
CAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGTATAACATG
CCATAGTTTTGTTGGTTACATCAGTCAGAAAACACATTTTAAACATGGCA
ATTATGAAAAATTCACTATGGTCAGAGCCCTTAATTGATTTATAACTGGA
CTCGAAAAAGCAAAGTAAAGTATGAATGAATGATTTTTTGCCGCCTCATT
CTAATTCAAACGCCGAGGGAATTGCTCTGGGGTATGATATCGATATAATA
ATAAGTTGATTAAATAAGATTGAAATGGGCCATTAATGTAGATGGATAGA
GTCGTTATTTTACGTGTAAAGCCCAGTGAACAAGGACTTTCTAGATAATC
TTTTAATTGTTTTCAAAAGGGTCCGCGGTCAGCCGACTCGGCTATTTAAA
CGAAGAGAGTGGGAACAAAGAACCCTTGGTTTTAGTGTTAGAATCTTTCA
AATCGTTTGTTACAGATTCAAGGTTCTTTGGAGAATTTTAGGGATATTTT
TCAAGATTATTTGGAAAATTTGTGTGTTAAAATCTTTCAAATCTTTCGTT
ACAGATTCAAGGTTATTTGGAGAATTTTATGGACGAATGCGAAGACATTT
CAATGTGGATAAACAACTTGGTCGATTATTATCCATCGTTCTCAGAAGGT
TGGGGTTTATACTCTGAAAATCCAATCTTACTGAAAGATGTTAACCTATT
GGAGGACAAGTTGTACCCGAAATATGGCGCCCTAAAATGGCAGGTGAGAG
AAAAAAGGTTTTAGTTTCATTTAAGTGTTCCCGTTTCATATCAAACACAT
GTTTCATATCGGGACAGTGTCTCCCTATTGTGCTGAATAAACAAAAATTG
TTTTTCTTTTCCTTTTTCTGACCAATCTTGCTCCACATCCGTATCAATTC
AATATCAAAAAGCTAGTGAATTAAAATTGATGAGTAAGCAAACGATATCA
CTCTTACTTAAAAAAAACAAACCTTTAAAGACCGGTCTCCACTTTCGCGC
GAAATGGGCTAAGTTTTTTTCCTAACCTTTTTTGCCTGAAGAAAAGATTA
CGTCATAAAAAAGTTTTGCACGAACAAAAAAAAAGTTGAAGGAAGTTCTA
CTTTTTTCATCCGTTACGTCAATTTCGACCAATGGAATTGCTTCTTTTTA
GATTTATTTCATTTTGAGTTATCCAAACTTTGTTTAGTTTATGGCATGCC
GGGACTGCCTCCGCGCGTTTATAAAAAAATAAAATAAAATAAATGGAATT
GCTTCATTTTTCAACTGACCAACGACCTTACAAAAACGTCAAAAAGTTTT
CACTCGTGTCGCACGAAAGTGGAGACCGGCCTTTACGTCAATCTCGACCA
ATGGAAATGCTTCATTTTTCAACCGACCAATGACCTTACAAAAACGTTAA
AAAGTTTTCACTCGTGTTGCGCGAAAGTGGAGACCGGCTTTAAGACAATA
CATGATATTAAAAGTTTGTGTTTATTAGCAGGGTGCTGGTTTTAGTTTAC
CAGGGTCGAATAATGTGATAAAAGGGTGGACTCATTGCGTCAAAGTGATC
ACAGATACAGATTATTTAGATCCTATCCTCTTGAAATACAGCTACAGTAT
GGTTTTGACACCCCTGTTTCTGTGCTCAAGTGGGTGGGATTTTAAAAATC
TGAAAGCGGTGCAAGAAAAAAATGGAATTGATCTGAATTGAGTGGTAAAC
ATTTCATTTGAATTTTCTACTGAGGCGGGAAAAATGTTGACAACTTTTTA
CATGAAGTAGAGCGCTTTGGACTAAGGATATTAAATCTTAAAATTAGTAC
ACTATACACAGTTTTGCGATATACATTTTTGTTCATTNTGATATGAAATG
CGAACACTTAAATGAAACTAAAACCTTTAAGATAATATGTATACATGATT
CTTGATAGATTTGGAGAGCACTGCGCCTGGTGGCTGATGTTGGTTTTCAT
CAGCGTGGTATCTCACGTGACGAAATCTTAAAGAAATTTCAAAAATACAC
ATGGGACACTTCAGACACCGTTGAAAAAGAATTAACACGCTACCAAGGTA
TAATATAAACTTTTTGTAAAGAAAAGCAAAATTTCGATGAGGCTTGGCTA
CAGCGAGAATAACTTGTGATATAGTCTTGTGATATAATGTACCTTAAGGG
AACTTATTTTTGTGGGAACTAATTTTGGCGGGCAGCAAAAATACTAAAAA
GAATTAATTTTGGCGAGAACTTATTTTGGCGAGTGAGCAAAATATTTAAT
TTTGGCGGGAACTAATTTTGGCGAATTTCGTCTAAATTCGCCAAATCCGC
CAAAATTAGTTCCCGTTAAGGTATTTCGTTTGTTTGCCTTAGTTAGAGCT
TAACTCATTCTAAAGTGTGTTGAGTTGCCTAAGATAGAAACAGGATAAAA
AGAATTTTAGGCTCAAAATGGGATTTTCCAGAAATAGTCCGTGCCCCTCC
CCTGTTGAGGATATCGGACATCGGGTTAACGTTTTTTGTTCAAGGGAAGG
GAACGGATATCCAGGGGGTAAAGTGTCTTTTCAAGTAAAAAATACGATAT
CCGGAAAAGCCCAATTGCAACAAATAAGAACAGCCGAGTCTCATAAACAA
AATTTACTGGTTCTTATAATAGAAAAAATAATTTCGTTTTTTCAAAATTT
TTCAGGAACACCGGGTCAGGCCACCTCATATACACTTGGTCAACAGACCA
TTTTAAAGTTACGTAATTATACACGTCAGCAACTTGGGAGCAAATTCGAC
ATTCGCGAATTTCATTACGCCCTTTTATCCGTTGGACAAGCGCCATTTGA
TTACATCAAACTTCACTTGGAAAATTACGTTAAATGTAAAAATGGAAACC
ACAAAGACTTTAAATTTTGTGACCTCGTTTTGAATTCGGACAGTGGCTCA
CGAAAACGAGGCTACATGATCAACGACCCCGTCAAAATCAAAAGACAGAC
ATTAATCAAAAAATTCTCAAGAACTACCAGAAAATACAAGCATTTATAGC
TTTTTATATATTTTCATCTTCATTTATTTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031444XLOC_031444Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049587-exon-scaffold_161-1575043694:58418..58896TCONS_00049587-exon-scaffold_161-1575043694:58418..58896Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:57803..57872TCONS_00049587-exon-scaffold_161-1575043694:57803..57872Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:51627..51784TCONS_00049587-exon-scaffold_161-1575043694:51627..51784Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:50254..51101TCONS_00049587-exon-scaffold_161-1575043694:50254..51101Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:49723..49873TCONS_00049587-exon-scaffold_161-1575043694:49723..49873Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:47805..47967TCONS_00049587-exon-scaffold_161-1575043694:47805..47967Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:47314..47490TCONS_00049587-exon-scaffold_161-1575043694:47314..47490Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:46030..46172TCONS_00049587-exon-scaffold_161-1575043694:46030..46172Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:44454..44642TCONS_00049587-exon-scaffold_161-1575043694:44454..44642Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:43150..43288TCONS_00049587-exon-scaffold_161-1575043694:43150..43288Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1575043694:42163..42541TCONS_00049587-exon-scaffold_161-1575043694:42163..42541Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:58418..58896TCONS_00049587-exon-scaffold_161-1510915933:58418..58896Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:57803..57872TCONS_00049587-exon-scaffold_161-1510915933:57803..57872Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:51627..51784TCONS_00049587-exon-scaffold_161-1510915933:51627..51784Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:50254..51101TCONS_00049587-exon-scaffold_161-1510915933:50254..51101Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:49723..49873TCONS_00049587-exon-scaffold_161-1510915933:49723..49873Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:47805..47967TCONS_00049587-exon-scaffold_161-1510915933:47805..47967Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:47314..47490TCONS_00049587-exon-scaffold_161-1510915933:47314..47490Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:46030..46172TCONS_00049587-exon-scaffold_161-1510915933:46030..46172Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:44454..44642TCONS_00049587-exon-scaffold_161-1510915933:44454..44642Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:43150..43288TCONS_00049587-exon-scaffold_161-1510915933:43150..43288Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1510915933:42163..42541TCONS_00049587-exon-scaffold_161-1510915933:42163..42541Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:58418..58896TCONS_00049587-exon-scaffold_161-1491911889:58418..58896Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:57803..57872TCONS_00049587-exon-scaffold_161-1491911889:57803..57872Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:51627..51784TCONS_00049587-exon-scaffold_161-1491911889:51627..51784Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:50254..51101TCONS_00049587-exon-scaffold_161-1491911889:50254..51101Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:49723..49873TCONS_00049587-exon-scaffold_161-1491911889:49723..49873Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:47805..47967TCONS_00049587-exon-scaffold_161-1491911889:47805..47967Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:47314..47490TCONS_00049587-exon-scaffold_161-1491911889:47314..47490Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:46030..46172TCONS_00049587-exon-scaffold_161-1491911889:46030..46172Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:44454..44642TCONS_00049587-exon-scaffold_161-1491911889:44454..44642Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:43150..43288TCONS_00049587-exon-scaffold_161-1491911889:43150..43288Clytia hemisphaericaexon
TCONS_00049587-exon-scaffold_161-1491911889:42163..42541TCONS_00049587-exon-scaffold_161-1491911889:42163..42541Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:42163..58896 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.133375	0.130062	0	0	0	0.568523	0.00386014	0.349994	2.36049	0.0492365	2.89565	2.12392	0	0.184239	0	0	0	0	0	0	0	0	0	0	2.00478	1.04535	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049587 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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