TCONS_00049577 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049577
Unique NameTCONS_00049577
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1626

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049577 ID=TCONS_00049577|Name=TCONS_00049577|organism=Clytia hemisphaerica|type=transcript|length=1626bp
TCATTGTCATGCAAATTAAGGCTTGTTACATTTTTTGCGTAATATAAAAG
CATGCTGTACTTGAATTTGATACTATGTTCATCTCAAGCTTGGGATAACA
CTAACAGGTTATGAAAGGCGTGTTGTACAGgtAATGAACTCATTCAGCAA
ACTTATTTCGACGAGTAGAGAAGTAGTCGTCGGTAAAAACTTAAAACATC
TTTTTTGAGTTTCACGAAGTGGTATCAAAGGAGACTATCATCaataacat
caaatcaaccaTCAAGAAAAAACTGAAGCTTTTTCCCAACCTTTCATCCC
AAAGAGTCATCAGATCAAGACTCGCATCTACAGTTGAGTACATCACATCT
ACTCCGCCATTATGAAAGACGTTATTTTCAGTCGCCATAGCAACCAAACG
GTTGGTTCGTTTCGAAATGATGTTGACGTTCAAAAGCATTTACCAAGAGA
ATTGTATAATGCGATATTTGGTGATATCCCTAATAATCTGGATGCGCAGC
GTTTAATTACTGTTCCACAGAACAAGaCATTGCTCAATAATGGAGCTTTC
GGTCACGCTTACGACGATGTTCGTAAATTATCGCGCATGTTACGAGATTT
TAGTGAGGATGAATCAGAAATCTTTTTCGATCAAGTTTGTTTACCCCTCG
TTAATCATTCGTATGCTGTTGTGGAGGAATTCATGGAAACTCCAAATGTA
TTGTTGGTACCGAATTGCACTATGGGTATGAAATGCATTGCTGAACATTT
GGTTCGACAACAAGGTCACAAGTCAATCGCCAGTTTATTTCCATTGTATG
GGGCAACAGCAAAATTACTTGAATATTATGATAGTGAGGAATTACTGTCA
ACATTGACTCGCATTTCACCAGGGGAAAATCCGTTGCTGGAAGAAAACCC
TGAGATCATTGTCAATTCATTGGAAGACGCGTATAACCTACAACCATACA
CCGTTCTCTTTTGTGATGAAATCGCAAGCCAAAGTGGCCGCCAATTACCG
CTCAACGCAATCGCGGATTTCTGTGATAGCCATGGAGTAAAGCTTGTAGT
TGATGGCACGCAAAGCTGTCAATTGTTTTTCGGCAGTAAAAAGAATGTTT
TGCAAAAGATCGATTATTTCGTGATGAGCACTCATAAATGGATTGGCAAC
ACCAAAACGTGTGGCATTATTCGATACAAAGACCAAGCGCCCCTACCGCC
CGCCATTTCATTTGGGTGGGAGGCGGACACCAAAAACCGCCCTTCAATTC
AAAAGATTCGTGCACAGTATACTTGGCAAGGAATGATGGATTCTTATGTT
TCATACATCACGTTGAGCAAAGCTATCAAGATTTTCAGcaAATACGGCGA
AGAGCAATTTTTCCAATCGTCTGCACTCCTTCGCAGAGGCTTGTCCAAGC
ATCTTGGCGTCCGCGAAATGTTACCGTCGGGAAAAGAACGCGTAATGAGT
ATTTTTGAGCTAGAATCATCCAACTTGAGCCAAATGAAGGACATCAACGC
CATACAAAACGCCCTTCAAGATTATGGCGTTTTGATCAGTGTGAAGAGAA
TCGGTCAAGATTGCAGTGGCATTACCATTGATGGTCATAAGATCATAAAC
GCCCATGGATCGCCCATCAAGAAGGG
Run BLAST on NCBI

protein sequence of TCONS_00049577-protein

>TCONS_00049577-protein ID=TCONS_00049577-protein|Name=TCONS_00049577-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
MKDVIFSRHSNQTVGSFRNDVDVQKHLPRELYNAIFGDIPNNLDAQRLIT
VPQNKTLLNNGAFGHAYDDVRKLSRMLRDFSEDESEIFFDQVCLPLVNHS
YAVVEEFMETPNVLLVPNCTMGMKCIAEHLVRQQGHKSIASLFPLYGATA
KLLEYYDSEELLSTLTRISPGENPLLEENPEIIVNSLEDAYNLQPYTVLF
CDEIASQSGRQLPLNAIADFCDSHGVKLVVDGTQSCQLFFGSKKNVLQKI
DYFVMSTHKWIGNTKTCGIIRYKDQAPLPPAISFGWEADTKNRPSIQKIR
AQYTWQGMMDSYVSYITLSKAIKIFSKYGEEQFFQSSALLRRGLSKHLGV
REMLPSGKERVMSIFELESSNLSQMKDINAIQNALQDYGVLISVKRIGQD
CSGITIDGHKIINAHGSPIKK
Run BLAST on NCBI

transcript from alignment at scaffold_161:243093..253598+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049577 ID=TCONS_00049577|Name=TCONS_00049577|organism=Clytia hemisphaerica|type=transcript|length=10506bp|location=Sequence derived from alignment at scaffold_161:243093..253598+ (Clytia hemisphaerica)
TCATTGTCATGCAAATTAAGGCTTGTTACATTTTTTGCGTAATATAAAAG CATGCTGTACTTGAATTTGATACTATGTTCATCTCAAGCTTGGGATAACA CTAACAGGTTATGAAAGGCGTGTTGTACAGGTAAGGCAGNACTTGGGGTA ACACTAACAGGTTATGAAAGGCGTGTTTTGCAGGTAAGGCAGtctaattt ttcttgtttaaCTGGGTTTTTTATTGTAGTATTATAGAGAGTTTGGTTTG GACTGTGTGGTCTAGCTAGCTAGAGGACCGGTTAGACAGACTTTTTTTCA TGCTATGGTGTTTATAAACAGGTTATTTCCTCTCTATCTCTATTGTTGTG TAACTTTATGCATGGCTTTTGTTGATATGTTTTGGTTTTGCAAATTGAAA GAGTCAAAACTGTAGTTGTTGGAATCGCTTCACCTTCCACGTCCTCGAAG TATAAAATCGCTATGAACCAGCACATTTACTGCATATACATGTTCACCTT TTAATGGTATCATAGGGAACTCGTTATCAGGAGGGGCAGGGTTTTGACCA CCTTACAAATTAAGTGTTATTTTTTAATATCAAGATTTTCAAAGCTTCAT TTCTGGGCAAAATCAGTCTTAAGTAGGTCATTTTTAAGACTGACGGCACG CACAAACTTCTTACGCCTCGATCCCGGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccggggcctcG ATATTCACATATTTTTGGCCACTCTTCTTCAAGATCATGGCTCTGATGAc ttttcaagctaaaatctGTTCCGAAAAATTGTCAAATACAGACTCCACtt ataattatcttttcaatgaggCATTACTTTTAGTTGTATCTCTTTTTCTT CAGAAGCATCGAAAGTATCAAAATATGTtgattctttcaattttgttaTG GAGCAGACTTTATATTACATAATCTATGCCATCATACAGACTATATACAT GCGCTGCTTTCTGATTTTGGAATGAAAATTGCTATAGGAGGACCAGGTGG TAAACCAGAAACCCAGGCTATAGTTCTTTAAGGGAGAAAGTGGAAAATTT CTATTCCAGTCGATTGACACTTTTAAAATGGGCCAATTAATTATGTTCTT AAAGTTCTATATTTTGAGCATGATGAAGCATgatatttttaaacattttc aatgaaCCTTGGAGGCTATTATTCCAAAATACCCTTCCAAACCATGTTCT TACTAGTATAAATTTTCTAATTACCAATGCTTTAATTGATCCAAGGAGAT AGTAATTGATTTTGTATTCTATAAATGCAGTCTCATGTCTAGTATCATTG TCTAGTGGAAAAAATGCCAAACCAAAGCAAAATTAAGAGAATTTTCTCAT gtcaaagacaaaaaaaaacaaaaattaacaaTTTCTGTTATAATTTTTAA GCTCGTCCCCTACCTATCCACCAATCACCAGACGATCGATAAAATCGATT ATCTATTAAAATCGTGGTTTAATTGCTaataatcgatagctaatcgtCTG GGATGTGCCGTTGGTCAGGGTACTTTTTTCCACctccatgagtcccaggt agggtcgcaaaaacaccaaactaGAAAAATCAGACCCTCGTAGGATACCT TTTTGGGGAATTTGGGGAAGAAGTAAAAAAGTTCAGAATTTCGGGATTTC AGtcactttttttccaaattttggcaaaactttcaaaaaaaagaacgatt cccacgtagggtccatttttcaaacctcagcggaacaccccccccccccc NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTTAGCA AGGGTAGGAACCCCCTGGGGGTTAGTCGATAGGTTGGATATCGATTGTAA TCATCTATTACGTTCACTTATCGATAATTATTCATTATTTAACGATCTAC CTCATTATTTCAAGGATCGATTAAAACCAATACAATCGATAGAAATAGTA AATTATTAAACATTGTGAATATCGATTAGTATCGAATATagattttattc aatttttatcgATTCTATCAAGggtactttttttaaattttctttgtacA GATAATAATATTGATCGTTTTGTTAATCACACTTTGACATATTTACATGC TACGAAAAGATATATTAAACCCTTATTATCGTGCCATGACCCCTTTGTTT CGTATCAATTTCAATTCCCATCcattgtttgtctattgattcGTTTAAAT TGGAAACATTACAGAGTTGACAGAGGTCACTTAcagtatttttgattttg tctCCTGAGACTTTTGAAACGAAATCAAAGCataataagaacatttcagt CTAATTATTTTTACTCCCATTGGCTGAAAAaccctactgggtctgtgaga agggggtgttttaagcATAAAAAACTAGTCTCAACAAAAAATTACTTGTT GCTATGAAAAGAGTTCGATCTTTTGTCCTAAACTGTATCTTTAGGACAAG AATTTTCCATTCCTTCAGACCATAATTTCTGTTTTTGTCTCAGTTTTCAC TTCtcatgaatttttaaaaaccaaaaaatccttagttcttgtttttattt catcGGCTCATGAAAGAAAGCTTAACTTTGTAAATCCTTGAAAAGAATGA AAACACCacacgtttcttttataagaacaaactatataagaacataaggc tctgatggcaaaaatgttaagaacattgaaaggctttgtggactcgaaaa cagccaatttcttaggaaaatggacaaaaatactcacaaaatggggaGAT TAAggacatgttaagaacattttaaggcttgaaactcaaaaagttaagaa aaggcttcgaaaattttgaatgttcttataatgttcttaatgTTTTAGAG ACTTTGAGTGACAAAATCCTTTTCTGCTGTTATTGCCAGAAcaaagaaat tcttttgtagGCTCTGTATCCTATTATACTCTAATAAGCTATATAAAAGT TCAGGTTTGttcataaaatgttcttattgttagcgtttttgagcctcatt gttcttataaaaatatttttttttttttatttatgtctCTTTAATTACCA AAAATCTCGGTATATTATGTAAAAGACAGTAGATCTTTATTTCGTGAAAG TTCATAAAGTTATTCTCTGAAGGTATGGATTATTCTTTTGTCTAAAAACC TCAAAAAGCTTTGAGAGAAGAACAAaagaataaagttttttgctcccctt tttatataagaacaatttaattaCTCAAGATCTAGAAAATAATCTACAGT TATCTCTCGTCTCCGagcctctattattcgaatctttctgtaatgcGTGC TAAAATACAaatcccctcagctggaaagtggtaTAAACTACTCTCTGTAA ATCGAATTTTTCTCGAattcgaataaaaatttttgtcccttgaagatcga gtTAGAGAGTTGCACTTACttcattcttataaataaatctTCTTTTCAAA CAATATTAACTGGATTTCCCTCTGTCTTGTACATGTACAGTGCTACAgta gatattttgaaatattacttTTGAAGCTATAATAGAACAGAGCACGCAGG AACTATGATTATGAAGTGGACAATAAAATGGGTGAAATATGGGACCTCCC AGCTGGTATCCAACGCTGTTTCAatgtccatctaacgttatatacaCGTT GTAACGTTATTGATGTCAGATGAACTTTGAAACAATGTTTTGTTCCAACC GGGCGCTCTTTGATTCCATTATTTTTAAGTAATTTGGGAATATTTATGAT CAAAAAGTTCTGAAatatattcttatttttataagaaccagtagatTTCT TGATGAGGCTTACcttgttgatatttttcgacactttgagcctcagattg ttcttatcttgttcttatcttgttcttatttataTCTTTACAGGGTAAAA TTGTggtattttaggctttatacTAAATCTTTTATACTTCGATctataaa tttcttaaaattaagTAATTCCATTGTTcgtttaaattgttcttattttt ctgtgattttgaGCCTCCATTGTTCTTATTAgataaaaaagtgtatatac ttttttttgtaagaatcagtaaattatttttaaaaaattgagctATTTTA GTTTCAGAGTTAGGTTTGCAGTTATGTAAGTGCAAATGCTTGGTGATTTG AGCCACaatgctcttataaaattgttcttataagtaTTTATAAGTAATTA TCAACTATTTTGTAGATAATTATTTGGAATGTTATATTCTAAGTCTCTTT GGGAAAGAAGTATTTGAAACACGAGgaagggagtttctaaacgcAATGCT TGATGGGAATTGCTACTGTAAaatagttgattttttttgaaattatggtc TGTGTGCGGTTGTGTATCTTGCTTcctcttctctttctttctccTCTTTA TCTCTCAATCTCTCttacaatattttattttatttggcTTGAGGGAGAAC AAAAGGAGCTTCTCGACTTCCTTTCTCTAATACTGGAACGCAAATTTGTG AGTCAGTAACCTGGTAACAGATTTGAGCTAAAGAGAGAACAAGAGAGTAT GCTCAAATTATAGATTTTGAGCTACAGACGTCTACACTAGCGTCATGGGA GCAACGGTTCATATGAATAAAGTCTTGCATTCGGATTTCTTTTGAACCCT AACAGGTTGACTTGACTGTGTTTGAAAGTATGCATTCCATATAATTTGCG TGGCTGCGTGATGAGCTCCGGCTGTGTTCTTCGTTtgctaaattgattga aatctCCTTTAAAATCAAGTCTTTCCGTAAAAAGTTTCTCCCGCCCataa gggccgataaggtacctaAAAGTCTCTACCCATATTACATTTACGTGGAA GAGTGTCGAGGGTACCTATGCTCATACTACATCTCTCtgtatttctttca tttttttcaggtAATGAACTCATTCAGCAAACTTATTTCGACGAGTAGAG AAGTAGTCGTCGGTAAAAACTTAAAACATCTTTTTTGAGGTAAGCTCATC TTCATAGTCTGGGAGGGGGATCTGACCCCTCTCCTTGGCATCCCTCCCAA AATTGAATACTNGTGGGAGGGGGGTCTGACCCCTCTTCTTGGCATCCCTC CCAAAAATGAATACTGCTGGTAATGTcgtactctaaggtcccgaatataC GTCTTTtagagaacaaactatataagaacataaggcttcaatggccaaaa tattaagaacaagttaaggaacatttttaggctttgcagactcttaAAAG ACCCAACTTCTTAGGAAGTTAGACAAAATACTCACACAAtgacgaaaata agaacacgttaagatcatttttaggtttgaaagtcaaaattttacGAACC ATTGAAGAaagcttcaaaaagttttggatgttcttataaaaaacgtgtaa acgtTCCCCATGGTTATTAATTTTCAAACGATTTTCGGATCCACCCTTTT ATTTGGACCCCCTTTTAATTCGGGGTCATAGAGTACAAGAGCCACATGCA CAACTTTTTATTTGACTGATTTGTATCCCAGACCAAAAAATttggcacct gtttgtgtattttacagaccagaattgttccaaagtatgtcatgttacat accgCTGGAAAGCAAATCTTTGACGCTGATTACATCACACCCtacttctg aaaatgaagccaattCACTAACCTTTAAATATCCCTGGacaaagctatat ccgccatcatTGATTGGAGTTTTATTTAAACTGGTatccgcaaagaagcc atttcAATGTTAGAATTAACGTTTAGCGGCGCTACATCATTAAAAGTATT CAAGGAAAAGTAGATATAGCGCTCTCGATGCTTCTACACCGCTATTAAGT AATGCTGCCATTatggtaccactttcaaaaaaactccgatcagagatttt gcttggccgggatatAAAAAGGTTAGTGAGCCAATTAAAGTTACAGGGGA GTAAAATTTAATAGATATTTGTTTGTATTTCAGTTTCACGAAGTGGTATC AAAGGAGACTATCATCaataacatcaaatcaaccaTCAAGAAAAAACTGA AGCTTTTTCCCAACCTTTCATCCCAAAGAGTCATCAGATCAAGACTCGCA TCTACAGTTGAGTACATCACATCTACTCCGCCATTATGAAAGACGTTATT TTCAGTCGCCATAGCAACCAAACGGTTGGTTCGTTTCGAAATGATGTTGA CGTTCAAAAGCATTTACCAAGAGAATTGTATAATGCGATATTTGGTGATA TCCCTAATAATCTGGATGCGCAGCGTTTAATTACTGTTCCACAGAACAAG GTAAGATGCTTTAAACAGCCATTAGTATATAATTACCTTTTTGGAGGGGG GGTTAGAGGTACAATTTTCAAccctcccccgtttattataattttttcaa aaatttcggacACCCctcataggcggttttagaccacgtCGAACTTGTCA GaagaagagatttgtaattgtaatctTTTAACGAGTGTTGCACTCCTTCA CATGTTACCGACGTACTTGCTCCATTGTCCTAAATCCGCCAGTGCCCCTC TTAccattcgggaccttagagtagttTCTTCCTTACTTCCTTGACATCTT GATTTTTAATACAATCGAGATGCAAATTTCTAGTAGATTTTTCAACAGCA AGTAAATTcaattttgtgattttagaCATTGCTCAATAATGGAGCTTTCG GTCACGCTTACGACGATGTTCGTAAATTATCGCGCATGTTACGAGATTTT AGTGAGGATGAATCAGAAATCTTTTTCGATCAAGTTTGTTTACCCCTCGT TAATCATTCGTATGCTGTTGTGGAGGAATTCATGGAAACTCCAAATGTAT TGTTGGTACCGAATTGCACTATGGGTATGAAATGCATTGCTGAACATTTG GTTCGACAACAAGGTAGGacttcattttgaaatactctCGCGATAATTCG ATCTTGAATGGGGAGAATAATTTATTCGACCTAGAGGGAAATTCGAAAAA AAGAGGTTTGGATTAGCGAGACTTCACTGAATAGCCTCGTTTTCaaagat atttgattttttctattttacatAATTGGTACTAATTATATGTATTCCAG ACAGATATTACCTCTAGAAGTGAACCTATCAAAAATCCCTTGTCATTATT GAGCTTCTTAGCAGATTATAGCAATCTTTGCAATTATTATTTTGCACATC TCTGGGATGCATTTATCCAACTTTGAAAGCTGAAGAAACTGCATTAGAGT TTACCAGGAACTGCTTAGAAAATCAATTCAACGTATCAATTCAAGCATTT GACTTCAATTCAACAATGTCCTTATCAACCCTGCGCCGACAGCGCCGGCT TTTGAGGGGACTAATGAATTTACAAACGAAATGATGTCaaagtttgttgt ttttgagaatatcaatgcagcgacttcagacattttgacgtcattctgTC CTGGTAAACTCTAACCCAGTCTCCTTGTTAATAGCTGTATTCTATAAGAA AATCAATGCACTTAAGCTTTAAGTTTGGATAGGTATATTTGTAAGGCATT CCGAATCTAAATTATCAACTCAATCTCCATCCATACTTTTTTCAGGTCAC AAGTCAATCGCCAGTTTATTTCCATTGTATGGGGCAACAGCAAAATTACT TGAATATTATGATAGTGAGGAATTACTGTCAACATTGACTCGCATTTCAC CAGGGGAAAATCCGTTGCTGGAAGAAAACCCTGAGGTAGGATAGCcagtt ttgcatttttcacCTATCATCAAGAATCTTAGTTCTAGGGAACTGTCTAA GTACTTTGACATCGTCATTCTTTTCACAGCTCAAATGTAAATAATTTGCG TTTGGTTAATTGGAACAACCAGGGAGAAAGGCTGATGCCCTCcctcgggt agatagctatcgagagaggagcctttgggtcgcctACGAATGTGGTGGCA GACTTACTTATAACCccatccagttttaaactttaGTTCTCTtggtaaaa ttattttgttctatcactttaaaattttgactttaacaTCAGATCATTGT CAATTCATTGGAAGACGCGTATAACCTACAACCATACACCGTTCTCTTTT GTGATGAAATCGCAAGCCAAAGTGGCCGCCAATTACCGCTCAACGCAATC GCGGATTTCTGTGATAGCCATGGAGTAAAGCTTGTAGTTGATGGCACGCA AAGCTGTCAATTGTTTTTCGGCAGTAAAAAGAATGTTTTGCAAAAGATCG ATTATTTCGTGATGAGCACTCATAAATGGATTGGTATGTAAATCGTTTGT ATTTGTAACATCCCCAGAAAATAACTAGAACcatgtgttttattttatac aCCATGTACAATGCTCATATGAAGTAACGGGGAAGTCTTTTTTAGAAATG ATACAAAATTAACAACCCTTGATCCCAATCCCATTTCACGTAGATGTATT ACTGTTAAAAAGCGCAGTACGAAATTTTCCCTAGATGTATCATGCATAAC TCCAATCTATAATAGGTTAACAAGATTAAGATTTTATAAACCTTTTGCTT ATTCTCCCAAGTCCGAACTAGCCGTAGAGGCATGCTGGTCATCCCTCTTG ACTCCTGCTGGGAAGTCCGAGTTCGATTCCAACTGTAGCTCTACGGGTCA TTTACCAATTGAATTTATCTTCGCCTGGGTCAACCTATGCCATATGAGGG GAATAGTATAccactactctgatacaagagtgttaGTGATATGCCAGGCA TTGTGATGCGCCATAGCACTGTCTATGCTTGAGATGAGTTATATCCTCTC CCGCGCAGTTCGAGTGCCATCACTATGCATCATGGTATCTGTGTCTCACG TGCGTATAACCAGTGCTGTCGCTGGACAATAATATGCattcctttaaaaa aaaggaGAATTCCTACTTCGTAAAGACCcagaatttcaattttgaattcc tTCTCAAAAGCAATATAATTTCAACGTGAAAGGAACGCGTGGAGGTATGG AAATCGTGCAACTTAATCTTTTATCTCCGGAATGTTAGTTAGTAAGAACA TCTGATAATCTTTCCATGAAAGACATCTTTgatccaaaatttcatactgG TTTTCTTTATATCTCATCGAATTTTACATATAGGCAACACCAAAACGTGT GGCATTATTCGATACAAAGACCAAGCGCCCCTACCGCCCGCCATTTCATT TGGGTGGGAGGCGGACACCAAAAACCGCCCTTCAATTCAAAAGATTCGTG CACAGTATACTTGGCAAGGAATGATGGATTCTTATGTTTCATACATCACG TTGAGCAAAGCTATCAAGATTTTCAGGTAATACAATTGTTTGGTACTGTT ATTAGCTTTTGTTGGgaattttaaaatatcaaatttctaaaaacggttct tacacggttcttacgtcgaaattctgttgttttttttgcaaaaattaaaa aacttgcGTAACTTGAATTCTcggtttgaaaaaaatctaggccaaaatat tttgaggttttgctcAGAACCATTAAAGGAATCCACATGCTAAATATCTT AAACCGTTTGATTATACCTTGCAGATAAGATAACTTGGAAATTCAAGaat attctttttctttcttagcaAATACGGCGAAGAGCAATTTTTCCAATCGT CTGCACTCCTTCGCAGAGGCTTGTCCAAGCATCTTGGCGTCCGCGAAATG TTACCGTCGGGAAAAGAACGCGTAATGAGTATTTTTGAGCTAGAATCATC CAACTTGAGCCAAATGAAGGACATCAACGCCATACAAAACGCCCTTCAAG ATTATGGCGTTTTGATCAGTGTGAAGAGAATCGGTCAAGATTGCAGTGGC ATTACCATTGATGGTCATAAGATCATAAACGCCCATGGATCGCCCATCAA GAAGGG

Coding sequence (CDS) from alignment at scaffold_161:243093..253598+

>TCONS_00049577 ID=TCONS_00049577|Name=TCONS_00049577|organism=Clytia hemisphaerica|type=CDS|length=7578bp|location=Sequence derived from alignment at scaffold_161:243093..253598+ (Clytia hemisphaerica)
ATGAAAGACGTTATTTTCAGTCGCCATAGCAACCAAACGGTTGGTTCGTT
TCGAAATGATGTTGACGTTCAAAAGCATTTACCAAGAGAATTGTATAATG
CGATATTTGGTGATATCCCTAATAATCTGGATGCGCAGCGTTTAATTACT
GTTCCACAGAACAAGaCATTGCTCAATAATGGAGCTTTCGGTCACGCTTA
CGACGATGTTCGTAAATTATCGCGCATGTTACGAGATTTTAGTGAGGATG
AATCAGAAATCTTTTTCGATCAAGTTTGTTTACCCCTCGTTAATCATTCG
TATGCTGTTGTGGAGGAATTCATGGAAACTCCAAATGTATTGTTGGTACC
GAATTGCACTATGGGTATGAAATGCATTGCTGAACATTTGGTTCGACAAC
AAGGTCACAAGTCAATCGCCAGTTTATTTCCATTGTATGGGGCAACAGCA
AAATTACTTGAATATTATGATAGTGAGGAATTACTGTCAACATTGACTCG
CATTTCACCAGGGGAAAATCCGTTGCTGGAAGAAAACCCTGAGATCATTG
TCAATTCATTGGAAGACGCGTATAACCTACAACCATACACCGTTCTCTTT
TGTGATGAAATCGCAAGCCAAAGTGGCCGCCAATTACCGCTCAACGCAAT
CGCGGATTTCTGTGATAGCCATGGAGTAAAGCTTGTAGTTGATGGCACGC
AAAGCTGTCAATTGTTTTTCGGCAGTAAAAAGAATGTTTTGCAAAAGATC
GATTATTTCGTGATGAGCACTCATAAATGGATTGGCAACACCAAAACGTG
TGGCATTATTCGATACAAAGACCAAGCGCCCCTACCGCCCGCCATTTCAT
TTGGGTGGGAGGCGGACACCAAAAACCGCCCTTCAATTCAAAAGATTCGT
GCACAGTATACTTGGCAAGGAATGATGGATTCTTATGTTTCATACATCAC
GTTGAGCAAAGCTATCAAGATTTTCAGcaAATACGGCGAAGAGCAATTTT
TCCAATCGTCTGCACTCCTTCGCAGAGGCTTGTCCAAGCATCTTGGCGTC
CGCGAAATGTTACCGTCGGGAAAAGAACGCGTAATGAGTATTTTTGAGCT
AGAATCATCCAACTTGAGCCAAATGAAGGACATCAACGCCATACAAAACG
CCCTTCAAGATTATGGCGTTTTGATCAGTGTGAAGAGAATCGGTCAAGAT
TGCAGTGGCATTACCATTGATGGTCATAAGATCATAAACGCCCATGGATC
GCCCATCAAGAAGATGAAAGACGTTATTTTCAGTCGCCATAGCAACCAAA
CGGTTGGTTCGTTTCGAAATGATGTTGACGTTCAAAAGCATTTACCAAGA
GAATTGTATAATGCGATATTTGGTGATATCCCTAATAATCTGGATGCGCA
GCGTTTAATTACTGTTCCACAGAACAAGaCATTGCTCAATAATGGAGCTT
TCGGTCACGCTTACGACGATGTTCGTAAATTATCGCGCATGTTACGAGAT
TTTAGTGAGGATGAATCAGAAATCTTTTTCGATCAAGTTTGTTTACCCCT
CGTTAATCATTCGTATGCTGTTGTGGAGGAATTCATGGAAACTCCAAATG
TATTGTTGGTACCGAATTGCACTATGGGTATGAAATGCATTGCTGAACAT
TTGGTTCGACAACAAGGTCACAAGTCAATCGCCAGTTTATTTCCATTGTA
TGGGGCAACAGCAAAATTACTTGAATATTATGATAGTGAGGAATTACTGT
CAACATTGACTCGCATTTCACCAGGGGAAAATCCGTTGCTGGAAGAAAAC
CCTGAGATCATTGTCAATTCATTGGAAGACGCGTATAACCTACAACCATA
CACCGTTCTCTTTTGTGATGAAATCGCAAGCCAAAGTGGCCGCCAATTAC
CGCTCAACGCAATCGCGGATTTCTGTGATAGCCATGGAGTAAAGCTTGTA
GTTGATGGCACGCAAAGCTGTCAATTGTTTTTCGGCAGTAAAAAGAATGT
TTTGCAAAAGATCGATTATTTCGTGATGAGCACTCATAAATGGATTGGCA
ACACCAAAACGTGTGGCATTATTCGATACAAAGACCAAGCGCCCCTACCG
CCCGCCATTTCATTTGGGTGGGAGGCGGACACCAAAAACCGCCCTTCAAT
TCAAAAGATTCGTGCACAGTATACTTGGCAAGGAATGATGGATTCTTATG
TTTCATACATCACGTTGAGCAAAGCTATCAAGATTTTCAGcaAATACGGC
GAAGAGCAATTTTTCCAATCGTCTGCACTCCTTCGCAGAGGCTTGTCCAA
GCATCTTGGCGTCCGCGAAATGTTACCGTCGGGAAAAGAACGCGTAATGA
GTATTTTTGAGCTAGAATCATCCAACTTGAGCCAAATGAAGGACATCAAC
GCCATACAAAACGCCCTTCAAGATTATGGCGTTTTGATCAGTGTGAAGAG
AATCGGTCAAGATTGCAGTGGCATTACCATTGATGGTCATAAGATCATAA
ACGCCCATGGATCGCCCATCAAGAAGATGAAAGACGTTATTTTCAGTCGC
CATAGCAACCAAACGGTTGGTTCGTTTCGAAATGATGTTGACGTTCAAAA
GCATTTACCAAGAGAATTGTATAATGCGATATTTGGTGATATCCCTAATA
ATCTGGATGCGCAGCGTTTAATTACTGTTCCACAGAACAAGaCATTGCTC
AATAATGGAGCTTTCGGTCACGCTTACGACGATGTTCGTAAATTATCGCG
CATGTTACGAGATTTTAGTGAGGATGAATCAGAAATCTTTTTCGATCAAG
TTTGTTTACCCCTCGTTAATCATTCGTATGCTGTTGTGGAGGAATTCATG
GAAACTCCAAATGTATTGTTGGTACCGAATTGCACTATGGGTATGAAATG
CATTGCTGAACATTTGGTTCGACAACAAGGTCACAAGTCAATCGCCAGTT
TATTTCCATTGTATGGGGCAACAGCAAAATTACTTGAATATTATGATAGT
GAGGAATTACTGTCAACATTGACTCGCATTTCACCAGGGGAAAATCCGTT
GCTGGAAGAAAACCCTGAGATCATTGTCAATTCATTGGAAGACGCGTATA
ACCTACAACCATACACCGTTCTCTTTTGTGATGAAATCGCAAGCCAAAGT
GGCCGCCAATTACCGCTCAACGCAATCGCGGATTTCTGTGATAGCCATGG
AGTAAAGCTTGTAGTTGATGGCACGCAAAGCTGTCAATTGTTTTTCGGCA
GTAAAAAGAATGTTTTGCAAAAGATCGATTATTTCGTGATGAGCACTCAT
AAATGGATTGGCAACACCAAAACGTGTGGCATTATTCGATACAAAGACCA
AGCGCCCCTACCGCCCGCCATTTCATTTGGGTGGGAGGCGGACACCAAAA
ACCGCCCTTCAATTCAAAAGATTCGTGCACAGTATACTTGGCAAGGAATG
ATGGATTCTTATGTTTCATACATCACGTTGAGCAAAGCTATCAAGATTTT
CAGcaAATACGGCGAAGAGCAATTTTTCCAATCGTCTGCACTCCTTCGCA
GAGGCTTGTCCAAGCATCTTGGCGTCCGCGAAATGTTACCGTCGGGAAAA
GAACGCGTAATGAGTATTTTTGAGCTAGAATCATCCAACTTGAGCCAAAT
GAAGGACATCAACGCCATACAAAACGCCCTTCAAGATTATGGCGTTTTGA
TCAGTGTGAAGAGAATCGGTCAAGATTGCAGTGGCATTACCATTGATGGT
CATAAGATCATAAACGCCCATGGATCGCCCATCAAGAAGATGAAAGACGT
TATTTTCAGTCGCCATAGCAACCAAACGGTTGGTTCGTTTCGAAATGATG
TTGACGTTCAAAAGCATTTACCAAGAGAATTGTATAATGCGATATTTGGT
GATATCCCTAATAATCTGGATGCGCAGCGTTTAATTACTGTTCCACAGAA
CAAGaCATTGCTCAATAATGGAGCTTTCGGTCACGCTTACGACGATGTTC
GTAAATTATCGCGCATGTTACGAGATTTTAGTGAGGATGAATCAGAAATC
TTTTTCGATCAAGTTTGTTTACCCCTCGTTAATCATTCGTATGCTGTTGT
GGAGGAATTCATGGAAACTCCAAATGTATTGTTGGTACCGAATTGCACTA
TGGGTATGAAATGCATTGCTGAACATTTGGTTCGACAACAAGGTCACAAG
TCAATCGCCAGTTTATTTCCATTGTATGGGGCAACAGCAAAATTACTTGA
ATATTATGATAGTGAGGAATTACTGTCAACATTGACTCGCATTTCACCAG
GGGAAAATCCGTTGCTGGAAGAAAACCCTGAGATCATTGTCAATTCATTG
GAAGACGCGTATAACCTACAACCATACACCGTTCTCTTTTGTGATGAAAT
CGCAAGCCAAAGTGGCCGCCAATTACCGCTCAACGCAATCGCGGATTTCT
GTGATAGCCATGGAGTAAAGCTTGTAGTTGATGGCACGCAAAGCTGTCAA
TTGTTTTTCGGCAGTAAAAAGAATGTTTTGCAAAAGATCGATTATTTCGT
GATGAGCACTCATAAATGGATTGGCAACACCAAAACGTGTGGCATTATTC
GATACAAAGACCAAGCGCCCCTACCGCCCGCCATTTCATTTGGGTGGGAG
GCGGACACCAAAAACCGCCCTTCAATTCAAAAGATTCGTGCACAGTATAC
TTGGCAAGGAATGATGGATTCTTATGTTTCATACATCACGTTGAGCAAAG
CTATCAAGATTTTCAGcaAATACGGCGAAGAGCAATTTTTCCAATCGTCT
GCACTCCTTCGCAGAGGCTTGTCCAAGCATCTTGGCGTCCGCGAAATGTT
ACCGTCGGGAAAAGAACGCGTAATGAGTATTTTTGAGCTAGAATCATCCA
ACTTGAGCCAAATGAAGGACATCAACGCCATACAAAACGCCCTTCAAGAT
TATGGCGTTTTGATCAGTGTGAAGAGAATCGGTCAAGATTGCAGTGGCAT
TACCATTGATGGTCATAAGATCATAAACGCCCATGGATCGCCCATCAAGA
AGATGAAAGACGTTATTTTCAGTCGCCATAGCAACCAAACGGTTGGTTCG
TTTCGAAATGATGTTGACGTTCAAAAGCATTTACCAAGAGAATTGTATAA
TGCGATATTTGGTGATATCCCTAATAATCTGGATGCGCAGCGTTTAATTA
CTGTTCCACAGAACAAGaCATTGCTCAATAATGGAGCTTTCGGTCACGCT
TACGACGATGTTCGTAAATTATCGCGCATGTTACGAGATTTTAGTGAGGA
TGAATCAGAAATCTTTTTCGATCAAGTTTGTTTACCCCTCGTTAATCATT
CGTATGCTGTTGTGGAGGAATTCATGGAAACTCCAAATGTATTGTTGGTA
CCGAATTGCACTATGGGTATGAAATGCATTGCTGAACATTTGGTTCGACA
ACAAGGTCACAAGTCAATCGCCAGTTTATTTCCATTGTATGGGGCAACAG
CAAAATTACTTGAATATTATGATAGTGAGGAATTACTGTCAACATTGACT
CGCATTTCACCAGGGGAAAATCCGTTGCTGGAAGAAAACCCTGAGATCAT
TGTCAATTCATTGGAAGACGCGTATAACCTACAACCATACACCGTTCTCT
TTTGTGATGAAATCGCAAGCCAAAGTGGCCGCCAATTACCGCTCAACGCA
ATCGCGGATTTCTGTGATAGCCATGGAGTAAAGCTTGTAGTTGATGGCAC
GCAAAGCTGTCAATTGTTTTTCGGCAGTAAAAAGAATGTTTTGCAAAAGA
TCGATTATTTCGTGATGAGCACTCATAAATGGATTGGCAACACCAAAACG
TGTGGCATTATTCGATACAAAGACCAAGCGCCCCTACCGCCCGCCATTTC
ATTTGGGTGGGAGGCGGACACCAAAAACCGCCCTTCAATTCAAAAGATTC
GTGCACAGTATACTTGGCAAGGAATGATGGATTCTTATGTTTCATACATC
ACGTTGAGCAAAGCTATCAAGATTTTCAGcaAATACGGCGAAGAGCAATT
TTTCCAATCGTCTGCACTCCTTCGCAGAGGCTTGTCCAAGCATCTTGGCG
TCCGCGAAATGTTACCGTCGGGAAAAGAACGCGTAATGAGTATTTTTGAG
CTAGAATCATCCAACTTGAGCCAAATGAAGGACATCAACGCCATACAAAA
CGCCCTTCAAGATTATGGCGTTTTGATCAGTGTGAAGAGAATCGGTCAAG
ATTGCAGTGGCATTACCATTGATGGTCATAAGATCATAAACGCCCATGGA
TCGCCCATCAAGAAGATGAAAGACGTTATTTTCAGTCGCCATAGCAACCA
AACGGTTGGTTCGTTTCGAAATGATGTTGACGTTCAAAAGCATTTACCAA
GAGAATTGTATAATGCGATATTTGGTGATATCCCTAATAATCTGGATGCG
CAGCGTTTAATTACTGTTCCACAGAACAAGaCATTGCTCAATAATGGAGC
TTTCGGTCACGCTTACGACGATGTTCGTAAATTATCGCGCATGTTACGAG
ATTTTAGTGAGGATGAATCAGAAATCTTTTTCGATCAAGTTTGTTTACCC
CTCGTTAATCATTCGTATGCTGTTGTGGAGGAATTCATGGAAACTCCAAA
TGTATTGTTGGTACCGAATTGCACTATGGGTATGAAATGCATTGCTGAAC
ATTTGGTTCGACAACAAGGTCACAAGTCAATCGCCAGTTTATTTCCATTG
TATGGGGCAACAGCAAAATTACTTGAATATTATGATAGTGAGGAATTACT
GTCAACATTGACTCGCATTTCACCAGGGGAAAATCCGTTGCTGGAAGAAA
ACCCTGAGATCATTGTCAATTCATTGGAAGACGCGTATAACCTACAACCA
TACACCGTTCTCTTTTGTGATGAAATCGCAAGCCAAAGTGGCCGCCAATT
ACCGCTCAACGCAATCGCGGATTTCTGTGATAGCCATGGAGTAAAGCTTG
TAGTTGATGGCACGCAAAGCTGTCAATTGTTTTTCGGCAGTAAAAAGAAT
GTTTTGCAAAAGATCGATTATTTCGTGATGAGCACTCATAAATGGATTGG
CAACACCAAAACGTGTGGCATTATTCGATACAAAGACCAAGCGCCCCTAC
CGCCCGCCATTTCATTTGGGTGGGAGGCGGACACCAAAAACCGCCCTTCA
ATTCAAAAGATTCGTGCACAGTATACTTGGCAAGGAATGATGGATTCTTA
TGTTTCATACATCACGTTGAGCAAAGCTATCAAGATTTTCAGcaAATACG
GCGAAGAGCAATTTTTCCAATCGTCTGCACTCCTTCGCAGAGGCTTGTCC
AAGCATCTTGGCGTCCGCGAAATGTTACCGTCGGGAAAAGAACGCGTAAT
GAGTATTTTTGAGCTAGAATCATCCAACTTGAGCCAAATGAAGGACATCA
ACGCCATACAAAACGCCCTTCAAGATTATGGCGTTTTGATCAGTGTGAAG
AGAATCGGTCAAGATTGCAGTGGCATTACCATTGATGGTCATAAGATCAT
AAACGCCCATGGATCGCCCATCAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031441XLOC_031441Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049577-proteinTCONS_00049577-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049577-exon-scaffold_161-1491911889:243093..243222TCONS_00049577-exon-scaffold_161-1491911889:243093..243222Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:243093..243222TCONS_00049577-exon-scaffold_161-1510915933:243093..243222Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:243093..243222TCONS_00049577-exon-scaffold_161-1575043694:243093..243222Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1491911889:248603..248681TCONS_00049577-exon-scaffold_161-1491911889:248603..248681Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:248603..248681TCONS_00049577-exon-scaffold_161-1510915933:248603..248681Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:248603..248681TCONS_00049577-exon-scaffold_161-1575043694:248603..248681Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1491911889:249676..249992TCONS_00049577-exon-scaffold_161-1491911889:249676..249992Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:249676..249992TCONS_00049577-exon-scaffold_161-1510915933:249676..249992Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:249676..249992TCONS_00049577-exon-scaffold_161-1575043694:249676..249992Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1491911889:250368..250605TCONS_00049577-exon-scaffold_161-1491911889:250368..250605Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:250368..250605TCONS_00049577-exon-scaffold_161-1510915933:250368..250605Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:250368..250605TCONS_00049577-exon-scaffold_161-1575043694:250368..250605Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1491911889:251288..251427TCONS_00049577-exon-scaffold_161-1491911889:251288..251427Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:251288..251427TCONS_00049577-exon-scaffold_161-1510915933:251288..251427Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:251288..251427TCONS_00049577-exon-scaffold_161-1575043694:251288..251427Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1491911889:251735..251975TCONS_00049577-exon-scaffold_161-1491911889:251735..251975Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:251735..251975TCONS_00049577-exon-scaffold_161-1510915933:251735..251975Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:251735..251975TCONS_00049577-exon-scaffold_161-1575043694:251735..251975Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1491911889:252826..253018TCONS_00049577-exon-scaffold_161-1491911889:252826..253018Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:252826..253018TCONS_00049577-exon-scaffold_161-1510915933:252826..253018Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:252826..253018TCONS_00049577-exon-scaffold_161-1575043694:252826..253018Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1491911889:253311..253598TCONS_00049577-exon-scaffold_161-1491911889:253311..253598Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1510915933:253311..253598TCONS_00049577-exon-scaffold_161-1510915933:253311..253598Clytia hemisphaericaexon
TCONS_00049577-exon-scaffold_161-1575043694:253311..253598TCONS_00049577-exon-scaffold_161-1575043694:253311..253598Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:243093..253598 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.117793 0.595317 0 8.67413 17.405 21.8915 24.4102 6.018 11.6292 3.00773 4.45129 7.02628 4.85925 8.16028 8.13697 18.5676 9.51535 18.4088 15.9589 28.0651 29.1882 12.4867 13.3627 5.84262 3.79215 8.8574 5.06766 77.5045 46.9712
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000192Aminotrans_V_dom
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049577 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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