TCONS_00049626 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049626
Unique NameTCONS_00049626
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049626 ID=TCONS_00049626|Name=TCONS_00049626|organism=Clytia hemisphaerica|type=transcript|length=2129bp
caagagtactttcgctatgcgaaattaacaaATGGAGTTCTTTTATACAA
GCACTTAATGTAATAATAAAACAATGACTTTTAATGGATTATGATTTTAC
CTTAGATATGACGCACGGCCAAAGAACTTTCACAGTTGATAAAACACTGA
TCTACACACACAACTCTGGAGTGGATGATGATGTTCATCATTACAAACCA
ACAAAACCCATAACCGAGGAACAAGAATGTAGACCGATACGAACTGGTCC
AAGCATTACAAAGACTGTTGCCGACTTTAGAGAAAGATCGTTACAGTATT
TTAAGGAAAACACAGTCGCAAGGGAGCGACATTTTCCGCCATCATTTTAC
CTGAAAGATCCAAACGTCAAGGATTGGTTAGAAAAACTGGACGAAATGGA
AATGTTCAAAGATGTGAAATTTTTGACACCTTACAATCCACGAAACCATT
TGTACATCATGGGATTGGATGATAAGGATTGTGATGAAATCATAACAGCA
AAACATAAATcgtatgatgacgtcattctgGTTGTTGATTTTGATCGTCA
CCTGTTGATGGTATGTTCTATCATCACTTCAAATGATCGAGAAACTCTGT
ATCAAGGAATACAAAAACTTAACGACATCACAAAAACAATTATCCATGTA
GccagtgacgtcatcaaaaacaatTACGTCACCATTATGTCGGTCCCAGT
TTTCCTTGACGTTGACGTGCACACTTTAAAACtatattcaatattcaatg
ACAATTTTGTTAGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGGT
TGCACACTCAAGTTACAAACCAAATTGGAAAGCTTCTGTAGAAAAGCTTC
AAGTGAGATGGCATCTTTTAAAAGACAAGGTGTCTGTTCAAGAGATCCCA
CTCTTTTAAATTCGTTGTGCGGGCAAATAATGAGTTCAATGGCCTCCACA
ACACAATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACAC
TATCCTTCTAAACCATAATCAAATCAACCTCATCAACGACCCAACGAAAT
GGAAGATCATCAAAGGACCATTTGGCTCTgGCAAAAGTGTCTCCATGTAC
GAGATTGCACGAAACATTATGCATCAAACAGATCAACTTTATTACATTAC
TTTTGATCCATTTTCATTGGTGGATTTAAAGTTCCAAGAGGGGTTCAATA
ACTTATGCGACAAGGAAAAACTTGACAAGTCCAAGATCAAAGCTTTCAGT
ATAGGTGATGCACTAGAAGGATCAACAATCGATATTTCGGATGTTTACAA
TATGATGTATCCACCGCGTATCAATCTTTGTCGAGTATTGGAATATCTTT
ATTCTGATAAAACAAAACGTGTCGGATTTATGATCGACGAGTTCCCTGGT
GATTTTCTCACAAGAAAATACGCTGAAAACCTCAAGGAAAGCCTCGTAAA
GAATTTCCAGGATACAACTGTCATTCTTGCGCTCCAAAGCgtagaaaaaa
aacgaaaagttGTCAAATCAGGATTTTTCAGTGATGATGTCAAGCAAGTT
GAGAGATGCGACTACCATCGAACCGGTATGAAAGTCTTCACTTTGGACAA
AACGATGCGAATGGCGGTAAATATTCACCAGATGATTGAAATCTTTCAGG
AAGAAATCGAAAAGGAAATCGTCGACGTTCCGTTAGAATACAAAACACGA
ATTTTACGCAGACCGTACGCACCCTCCGcccaaaaaacaagaaaagctTC
CAAAGATGTCCCTCTTAAGCCTcaagaaaagaaagaacaaaatcAACCAA
GACCAACGGATGACGTCAGTCTCCACGATAACCCGAATCATCCTTCAACT
CAAAGCGTGCGAAGGAAAACCAACATTGCCTCATTctacgatccagaaaa
attgtTAACAGACATAAACGCTCAATCAGGGTCTGTttccaaaaaacttt
caacttcATTCTCTTATGTTCGTGGTAAAAGTGGTCATCAAATCAAAAGT
GATTCAAAGCCCAATCTCATTTATTTAAACGACTTTAGATTCGACTTCAA
TAACTTTAATTCGTCTGATGCAGCTTATTTGAGTGCAATTTTAAGAAGGC
TGATGAAAAAGGATGTTCAGTTAACCGNN
Run BLAST on NCBI

protein sequence of TCONS_00049626-protein

>TCONS_00049626-protein ID=TCONS_00049626-protein|Name=TCONS_00049626-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
MDYDFTLDMTHGQRTFTVDKTLIYTHNSGVDDDVHHYKPTKPITEEQECR
PIRTGPSITKTVADFRERSLQYFKENTVARERHFPPSFYLKDPNVKDWLE
KLDEMEMFKDVKFLTPYNPRNHLYIMGLDDKDCDEIITAKHKSYDDVILV
VDFDRHLLMVCSIITSNDRETLYQGIQKLNDITKTIIHVASDVIKNNYVT
IMSVPVFLDVDVHTLKLYSIFNDNFVSCSGMLVTKNDLGCTLKLQTKLES
FCRKASSEMASFKRQGVCSRDPTLLNSLCGQIMSSMASTTQYLPKISENV
PEKIDTILLNHNQINLINDPTKWKIIKGPFGSGKSVSMYEIARNIMHQTD
QLYYITFDPFSLVDLKFQEGFNNLCDKEKLDKSKIKAFSIGDALEGSTID
ISDVYNMMYPPRINLCRVLEYLYSDKTKRVGFMIDEFPGDFLTRKYAENL
KESLVKNFQDTTVILALQSVEKKRKVVKSGFFSDDVKQVERCDYHRTGMK
VFTLDKTMRMAVNIHQMIEIFQEEIEKEIVDVPLEYKTRILRRPYAPSAQ
KTRKASKDVPLKPQEKKEQNQPRPTDDVSLHDNPNHPSTQSVRRKTNIAS
FYDPEKLLTDINAQSGSVSKKLSTSFSYVRGKSGHQIKSDSKPNLIYLND
FRFDFNNFNSSDAAYLSAILRRLMKKDVQLTX
Run BLAST on NCBI

transcript from alignment at scaffold_162:99891..103318-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049626 ID=TCONS_00049626|Name=TCONS_00049626|organism=Clytia hemisphaerica|type=transcript|length=3428bp|location=Sequence derived from alignment at scaffold_162:99891..103318- (Clytia hemisphaerica)
CAAGAGTACTTTCGCTATGCGAAATTAACAAATGGAGTTCTTTTATACAA GCACTTAATGTAATAATAAAACAATGACTTTTAATGGATTATGATTTTAC CTTAGATATGACGCACGGCCAAAGAACTTTCACAGTTGATAAAACACTGA TCTACACACACAACTCTGGAGTGGATGATGATGTTCATCATTACAAACCA ACAAAACCCATAACCGAGGAACAAGAATGTAGACCGATACGAACTGGTCC AAGCATTACAAAGACTGTTGCCGACTTTAGAGAAAGATCGTTACAGTATT TTAAGGAAAACACAGTCGCAAGGGAGCGACATTTTCCGCCATCATTTTAC CTGAAAGATCCAAACGTCAAGGATTGGTTAGAAAAACTGGACGAAATGGA AATGTTCAAAGATGTGAAATTTTTGACACCTTACAATCCACGAAACCATT TGTACATCATGGGATTGGATGATAAGGATTGTGATGAAATCATAACAGCA AAACATAAATCGTATGATGACGTCATTCTGGTTGTTGATTTTGATCGTCA CCTGTTGATGGTATGTTCTATCATCACTTCAAATGATCGAGAAACTCTGT ATCAAGGAATACAAAAACTTAACGACATCACAAAAACAATTATCCATGTA GCCAGTGACGTCATCAAAAACAATTACGTCACCATTATGTCGGTCCCAGT TTTCCTTGACGTTGACGTGCACACTTTAAAACTATATTCAATATTCAATG ACAATTTTGTTAGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGGT TGCACACTCAAGTTACAAACCAAATTGGAAAGCTTCTGTAGAAAAGCTTC AAGTGAGATGGCATCTTTTAAAAGACAAGGTGTCTGTTCAAGAGATCCCA CTCTTTTAAATTCGTTGTGCGGGCAAATAATGAGTTCAATGGCCTCCACA ACACAATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACAC TATCCTTCTAAACCATAATCAAATCAACCTCATCAACGACCCAACGAAAT GGAAGATCATCAAAGGACCATTTGGCTCTGGTGAGTTTTTTTTTATTTCT CAAAAATTTCTTTAATTTATTTTAGAACATATGGTTAAAATTTAGCATGT GCTACCGAAACAATCAATAGTCACTCAGAAAATCCTTTGGGACATTTAAT GAAAACCTCAATTCTCAGTACAAATCCCTGTAAATTCCCCTGTCTTCAAA TACGATTTTAAAGCTTTAATCTAAACGGAGATGAGAAGTAGATAGTACTG ATCTAAAGGTGATTTTTACTACACGATTCTCTTCGCGTAATTTTTTTGTC TTTTTTTTTCAAAGTTTACAGACCGACTTACTGTCGTTTTGTATAAGTTT CCCATTTCCGGAAAAGGACCAGGACTTCAGGTAGTTGAAAAATGAGCTTC GGAAGGTAGGCAAACTCATGAGTAAGCACAAAATTTTCTGTACCTTTAGA AACAAACCCTTTCCAACCTTATGCTGTTATCCCGGAAAAGTAACAAAAAT CTTTATGTGGAAATGGGAAACTTAAACAAAACGACGGTAGATTATCTTTT AATTAGCCTGGGTATCAAACATAATCCACATTTATAAAGGCTCATTTCCA TCGGCCATTTTGTATAGAAATGAACCTGTGCCTTCATTTTCATTTGTTTT CCTTTTTTTGTAATGTTATCGAAAACCCCGTGAAAATTCTGCTCAGTGAC TCGGCGCGAATTAACCAATCAGATGCACTCGCATATGCAGGAAAAAATAT TCCTGCAGACGAGTTAGTTGGACCAGACAAACAAGAAGAAAAGAGACAAG ATTATACTGTGAAATAGTTTACGGTCTATATAGGCTATACAGTTACTCTC TCTGTATTGGACGTGTTTATTGAAGTTTAGGAATCTGTGTTTTTCTATGA CGGAGGTGGTTAGCTTCTTTCTTTTGTCTCGGTTCTGACGGTATTTTTCT CGTCCTCAATTCTGCAATTCAAAACTGCTTGTGGTTCAAAACTGTTTCAT TCACTCAACCATCCACGTTCAAACTGTTCTCAATTACTTCTTAGGCAAAA GTGTCTCCATGTACGAGATTGCACGAAACATTATGCATCAAACAGATCAA CTTTATTACATTACTTTTGATCCATTTTCATTGGTGGATTTAAAGTTCCA AGAGGGGTTCAATAACTTATGCGACAAGGAAAAACTTGACAAGTCCAAGA TCAAAGCTTTCAGTATAGGTGATGCACTAGAAGGATCAACAATCGATATT TCGGATGTTTACAATATGATGTATCCACCGCGTATCAATCTTTGTCGAGT ATTGGAATATCTTTATTCTGATAAAACAAAACGTGTCGGATTTATGATCG ACGAGTTCCCTGGTGATTTTCTCACAAGAAAATACGCTGAAAACCTCAAG GAAAGCCTCGTAAAGAATTTCCAGGATACAACTGTCATTCTTGCGCTCCA AAGCGTAGAAAAAAAACGAAAAGTTGTCAAATCAGGATTTTTCAGTGGTA AGTCATTTTTGAACTTTGCCTAGACCACAAAAATGTCTTATGTTATCTTC TTTTTTACTCATATTTCATTTTGTAGTTTGAAGAAATTGCGATAGATCCT AAGCTAATAGAGTAGACCTGTAGATCATGTCTTGTATCCTTTGATATGTT AAATGGAAGAGACTTTTTTGCGAGACTATTGCATATACTACTTTGCTTTT TGAAGCAAGCGAACCATTCACCTCACCATGCAATATTTTGCATAAAAACG GTTATTCAATTTTCATCGAATTCCTTTTGTAGATGATGTCAAGCAAGTTG AGAGATGCGACTACCATCGAACCGGTATGAAAGTCTTCACTTTGGACAAA ACGATGCGAATGGCGGTAAATATTCACCAGATGATTGAAATCTTTCAGGA AGAAATCGAAAAGGAAATCGTCGACGTTCCGTTAGAATACAAAACACGAA TTTTACGCAGACCGTACGCACCCTCCGCCCAAAAAACAAGAAAAGCTTCC AAAGATGTCCCTCTTAAGCCTCAAGAAAAGAAAGAACAAAATCAACCAAG ACCAACGGATGACGTCAGTCTCCACGATAACCCGAATCATCCTTCAACTC AAAGCGTGCGAAGGAAAACCAACATTGCCTCATTCTACGATCCAGAAAAA TTGTTAACAGACATAAACGCTCAATCAGGGTCTGTTTCCAAAAAACTTTC AACTTCATTCTCTTATGTTCGTGGTAAAAGTGGTCATCAAATCAAAAGTG ATTCAAAGCCCAATCTCATTTATTTAAACGACTTTAGATTCGACTTCAAT AACTTTAATTCGTCTGATGCAGCTTATTTGAGTGCAATTTTAAGAAGGCT GATGAAAAAGGATGTTCAGTTAACCGNN

Coding sequence (CDS) from alignment at scaffold_162:99891..103318-

>TCONS_00049626 ID=TCONS_00049626|Name=TCONS_00049626|organism=Clytia hemisphaerica|type=CDS|length=6138bp|location=Sequence derived from alignment at scaffold_162:99891..103318- (Clytia hemisphaerica)
ATGATGTCAAGCAAGTTGAGAGATGCGACTACCATCGAACCGGTATGAAA
GTCTTCACTTTGGACAAAACGATGCGAATGGCGGTAAATATTCACCAGAT
GATTGAAATCTTTCAGGAAGAAATCGAAAAGGAAATCGTCGACGTTCCGT
TAGAATACAAAACACGAATTTTACGCAGACCGTACGCACCCTCCGCCCAA
AAAACAAGAAAAGCTTCCAAAGATGTCCCTCTTAAGCCTCAAGAAAAGAA
AGAACAAAATCAACCAAGACCAACGGATGACGTCAGTCTCCACGATAACC
CGAATCATCCTTCAACTCAAAGCGTGCGAAGGAAAACCAACATTGCCTCA
TTCTACGATCCAGAAAAATTGTTAACAGACATAAACGCTCAATCAGGGTC
TGTTTCCAAAAAACTTTCAACTTCATTCTCTTATGTTCGTGGTAAAAGTG
GTCATCAAATCAAAAGTGATTCAAAGCCCAATCTCATTTATTTAAACGAC
TTTAGATTCGACTTCAATAACTTTAATTCGTCTGATGCAGCTTATTTGAG
TGCAATTTTAAGAAGGCTGATGAAAAAGGATGTTCAGTTAACCGNNGCAA
AAGTGTCTCCATGTACGAGATTGCACGAAACATTATGCATCAAACAGATC
AACTTTATTACATTACTTTTGATCCATTTTCATTGGTGGATTTAAAGTTC
CAAGAGGGGTTCAATAACTTATGCGACAAGGAAAAACTTGACAAGTCCAA
GATCAAAGCTTTCAGTATAGGTGATGCACTAGAAGGATCAACAATCGATA
TTTCGGATGTTTACAATATGATGTATCCACCGCGTATCAATCTTTGTCGA
GTATTGGAATATCTTTATTCTGATAAAACAAAACGTGTCGGATTTATGAT
CGACGAGTTCCCTGGTGATTTTCTCACAAGAAAATACGCTGAAAACCTCA
AGGAAAGCCTCGTAAAGAATTTCCAGGATACAACTGTCATTCTTGCGCTC
CAAAGCGTAGAAAAAAAACGAAAAGTTGTCAAATCAGGATTTTTCAGTGA
TGGATTATGATTTTACCTTAGATATGACGCACGGCCAAAGAACTTTCACA
GTTGATAAAACACTGATCTACACACACAACTCTGGAGTGGATGATGATGT
TCATCATTACAAACCAACAAAACCCATAACCGAGGAACAAGAATGTAGAC
CGATACGAACTGGTCCAAGCATTACAAAGACTGTTGCCGACTTTAGAGAA
AGATCGTTACAGTATTTTAAGGAAAACACAGTCGCAAGGGAGCGACATTT
TCCGCCATCATTTTACCTGAAAGATCCAAACGTCAAGGATTGGTTAGAAA
AACTGGACGAAATGGAAATGTTCAAAGATGTGAAATTTTTGACACCTTAC
AATCCACGAAACCATTTGTACATCATGGGATTGGATGATAAGGATTGTGA
TGAAATCATAACAGCAAAACATAAATCGTATGATGACGTCATTCTGGTTG
TTGATTTTGATCGTCACCTGTTGATGGTATGTTCTATCATCACTTCAAAT
GATCGAGAAACTCTGTATCAAGGAATACAAAAACTTAACGACATCACAAA
AACAATTATCCATGTAGCCAGTGACGTCATCAAAAACAATTACGTCACCA
TTATGTCGGTCCCAGTTTTCCTTGACGTTGACGTGCACACTTTAAAACTA
TATTCAATATTCAATGACAATTTTGTTAGTTGCAGTGGAATGTTGGTCAC
TAAAAACGATTTAGGTTGCACACTCAAGTTACAAACCAAATTGGAAAGCT
TCTGTAGAAAAGCTTCAAGTGAGATGGCATCTTTTAAAAGACAAGGTGTC
TGTTCAAGAGATCCCACTCTTTTAAATTCGTTGTGCGGGCAAATAATGAG
TTCAATGGCCTCCACAACACAATATCTGCCGAAGATATCGGAAAATGTTC
CAGAAAAGATCGACACTATCCTTCTAAACCATAATCAAATCAACCTCATC
AACGACCCAACGAAATGGAAGATCATCAAAGGACCATTTGGCTCTGATGA
TGTCAAGCAAGTTGAGAGATGCGACTACCATCGAACCGGTATGAAAGTCT
TCACTTTGGACAAAACGATGCGAATGGCGGTAAATATTCACCAGATGATT
GAAATCTTTCAGGAAGAAATCGAAAAGGAAATCGTCGACGTTCCGTTAGA
ATACAAAACACGAATTTTACGCAGACCGTACGCACCCTCCGCCCAAAAAA
CAAGAAAAGCTTCCAAAGATGTCCCTCTTAAGCCTCAAGAAAAGAAAGAA
CAAAATCAACCAAGACCAACGGATGACGTCAGTCTCCACGATAACCCGAA
TCATCCTTCAACTCAAAGCGTGCGAAGGAAAACCAACATTGCCTCATTCT
ACGATCCAGAAAAATTGTTAACAGACATAAACGCTCAATCAGGGTCTGTT
TCCAAAAAACTTTCAACTTCATTCTCTTATGTTCGTGGTAAAAGTGGTCA
TCAAATCAAAAGTGATTCAAAGCCCAATCTCATTTATTTAAACGACTTTA
GATTCGACTTCAATAACTTTAATTCGTCTGATGCAGCTTATTTGAGTGCA
ATTTTAAGAAGGCTGATGAAAAAGGATGTTCAGTTAACCGNNGCAAAAGT
GTCTCCATGTACGAGATTGCACGAAACATTATGCATCAAACAGATCAACT
TTATTACATTACTTTTGATCCATTTTCATTGGTGGATTTAAAGTTCCAAG
AGGGGTTCAATAACTTATGCGACAAGGAAAAACTTGACAAGTCCAAGATC
AAAGCTTTCAGTATAGGTGATGCACTAGAAGGATCAACAATCGATATTTC
GGATGTTTACAATATGATGTATCCACCGCGTATCAATCTTTGTCGAGTAT
TGGAATATCTTTATTCTGATAAAACAAAACGTGTCGGATTTATGATCGAC
GAGTTCCCTGGTGATTTTCTCACAAGAAAATACGCTGAAAACCTCAAGGA
AAGCCTCGTAAAGAATTTCCAGGATACAACTGTCATTCTTGCGCTCCAAA
GCGTAGAAAAAAAACGAAAAGTTGTCAAATCAGGATTTTTCAGTGATGGA
TTATGATTTTACCTTAGATATGACGCACGGCCAAAGAACTTTCACAGTTG
ATAAAACACTGATCTACACACACAACTCTGGAGTGGATGATGATGTTCAT
CATTACAAACCAACAAAACCCATAACCGAGGAACAAGAATGTAGACCGAT
ACGAACTGGTCCAAGCATTACAAAGACTGTTGCCGACTTTAGAGAAAGAT
CGTTACAGTATTTTAAGGAAAACACAGTCGCAAGGGAGCGACATTTTCCG
CCATCATTTTACCTGAAAGATCCAAACGTCAAGGATTGGTTAGAAAAACT
GGACGAAATGGAAATGTTCAAAGATGTGAAATTTTTGACACCTTACAATC
CACGAAACCATTTGTACATCATGGGATTGGATGATAAGGATTGTGATGAA
ATCATAACAGCAAAACATAAATCGTATGATGACGTCATTCTGGTTGTTGA
TTTTGATCGTCACCTGTTGATGGTATGTTCTATCATCACTTCAAATGATC
GAGAAACTCTGTATCAAGGAATACAAAAACTTAACGACATCACAAAAACA
ATTATCCATGTAGCCAGTGACGTCATCAAAAACAATTACGTCACCATTAT
GTCGGTCCCAGTTTTCCTTGACGTTGACGTGCACACTTTAAAACTATATT
CAATATTCAATGACAATTTTGTTAGTTGCAGTGGAATGTTGGTCACTAAA
AACGATTTAGGTTGCACACTCAAGTTACAAACCAAATTGGAAAGCTTCTG
TAGAAAAGCTTCAAGTGAGATGGCATCTTTTAAAAGACAAGGTGTCTGTT
CAAGAGATCCCACTCTTTTAAATTCGTTGTGCGGGCAAATAATGAGTTCA
ATGGCCTCCACAACACAATATCTGCCGAAGATATCGGAAAATGTTCCAGA
AAAGATCGACACTATCCTTCTAAACCATAATCAAATCAACCTCATCAACG
ACCCAACGAAATGGAAGATCATCAAAGGACCATTTGGCTCTGATGATGTC
AAGCAAGTTGAGAGATGCGACTACCATCGAACCGGTATGAAAGTCTTCAC
TTTGGACAAAACGATGCGAATGGCGGTAAATATTCACCAGATGATTGAAA
TCTTTCAGGAAGAAATCGAAAAGGAAATCGTCGACGTTCCGTTAGAATAC
AAAACACGAATTTTACGCAGACCGTACGCACCCTCCGCCCAAAAAACAAG
AAAAGCTTCCAAAGATGTCCCTCTTAAGCCTCAAGAAAAGAAAGAACAAA
ATCAACCAAGACCAACGGATGACGTCAGTCTCCACGATAACCCGAATCAT
CCTTCAACTCAAAGCGTGCGAAGGAAAACCAACATTGCCTCATTCTACGA
TCCAGAAAAATTGTTAACAGACATAAACGCTCAATCAGGGTCTGTTTCCA
AAAAACTTTCAACTTCATTCTCTTATGTTCGTGGTAAAAGTGGTCATCAA
ATCAAAAGTGATTCAAAGCCCAATCTCATTTATTTAAACGACTTTAGATT
CGACTTCAATAACTTTAATTCGTCTGATGCAGCTTATTTGAGTGCAATTT
TAAGAAGGCTGATGAAAAAGGATGTTCAGTTAACCGNNGCAAAAGTGTCT
CCATGTACGAGATTGCACGAAACATTATGCATCAAACAGATCAACTTTAT
TACATTACTTTTGATCCATTTTCATTGGTGGATTTAAAGTTCCAAGAGGG
GTTCAATAACTTATGCGACAAGGAAAAACTTGACAAGTCCAAGATCAAAG
CTTTCAGTATAGGTGATGCACTAGAAGGATCAACAATCGATATTTCGGAT
GTTTACAATATGATGTATCCACCGCGTATCAATCTTTGTCGAGTATTGGA
ATATCTTTATTCTGATAAAACAAAACGTGTCGGATTTATGATCGACGAGT
TCCCTGGTGATTTTCTCACAAGAAAATACGCTGAAAACCTCAAGGAAAGC
CTCGTAAAGAATTTCCAGGATACAACTGTCATTCTTGCGCTCCAAAGCGT
AGAAAAAAAACGAAAAGTTGTCAAATCAGGATTTTTCAGTGATGGATTAT
GATTTTACCTTAGATATGACGCACGGCCAAAGAACTTTCACAGTTGATAA
AACACTGATCTACACACACAACTCTGGAGTGGATGATGATGTTCATCATT
ACAAACCAACAAAACCCATAACCGAGGAACAAGAATGTAGACCGATACGA
ACTGGTCCAAGCATTACAAAGACTGTTGCCGACTTTAGAGAAAGATCGTT
ACAGTATTTTAAGGAAAACACAGTCGCAAGGGAGCGACATTTTCCGCCAT
CATTTTACCTGAAAGATCCAAACGTCAAGGATTGGTTAGAAAAACTGGAC
GAAATGGAAATGTTCAAAGATGTGAAATTTTTGACACCTTACAATCCACG
AAACCATTTGTACATCATGGGATTGGATGATAAGGATTGTGATGAAATCA
TAACAGCAAAACATAAATCGTATGATGACGTCATTCTGGTTGTTGATTTT
GATCGTCACCTGTTGATGGTATGTTCTATCATCACTTCAAATGATCGAGA
AACTCTGTATCAAGGAATACAAAAACTTAACGACATCACAAAAACAATTA
TCCATGTAGCCAGTGACGTCATCAAAAACAATTACGTCACCATTATGTCG
GTCCCAGTTTTCCTTGACGTTGACGTGCACACTTTAAAACTATATTCAAT
ATTCAATGACAATTTTGTTAGTTGCAGTGGAATGTTGGTCACTAAAAACG
ATTTAGGTTGCACACTCAAGTTACAAACCAAATTGGAAAGCTTCTGTAGA
AAAGCTTCAAGTGAGATGGCATCTTTTAAAAGACAAGGTGTCTGTTCAAG
AGATCCCACTCTTTTAAATTCGTTGTGCGGGCAAATAATGAGTTCAATGG
CCTCCACAACACAATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAG
ATCGACACTATCCTTCTAAACCATAATCAAATCAACCTCATCAACGACCC
AACGAAATGGAAGATCATCAAAGGACCATTTGGCTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031464XLOC_031464Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049626-proteinTCONS_00049626-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049626-exon-scaffold_162-1575043694:102239..103318TCONS_00049626-exon-scaffold_162-1575043694:102239..103318Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1575043694:100772..101224TCONS_00049626-exon-scaffold_162-1575043694:100772..101224Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1575043694:99891..100486TCONS_00049626-exon-scaffold_162-1575043694:99891..100486Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1510915933:102239..103318TCONS_00049626-exon-scaffold_162-1510915933:102239..103318Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1510915933:100772..101224TCONS_00049626-exon-scaffold_162-1510915933:100772..101224Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1510915933:99891..100486TCONS_00049626-exon-scaffold_162-1510915933:99891..100486Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1491911889:102239..103318TCONS_00049626-exon-scaffold_162-1491911889:102239..103318Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1491911889:100772..101224TCONS_00049626-exon-scaffold_162-1491911889:100772..101224Clytia hemisphaericaexon
TCONS_00049626-exon-scaffold_162-1491911889:99891..100486TCONS_00049626-exon-scaffold_162-1491911889:99891..100486Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_162supercontigscaffold_162:99891..103318 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.118985 0 0 0.0222637 0.339972 0.252118 1.8798 1.34368 1.63457 2.22862 2.4948 1.17472 14.2564 10.8388 10.9992 12.5965 5.81653 12.1052 18.692 19.8303 9.30141 9.43882 7.05036 8.93155 11.7138 10.6243 47.9206 38.8242 35.751 36.1586
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049626 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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