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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049665 ID=TCONS_00049665|Name=TCONS_00049665|organism=Clytia hemisphaerica|type=transcript|length=1197bp
cgcacacacgatagcaaaactgcttcgctcatgtacattcgcttcgcaaa
aagaaTTTATTCAGCTATAAGACAATgttaatctttagtaagtgtgATCT
AATTCTGCTCAAACTTTATGGAACTAATAGATTCTGTCTTGTTTTCATCT
TTGACGTTTGACTGCTTCAGACACACGTTTTTTTACCAGTTGTAACTATC
CATATCATTATTGATGCTGAAAGTAGTTTTTCCTGCTGATCCTGTGGGTA
TTTATTACAAATAGTGCAAATACAAACATCCATATCATTTGGTGCTGACT
GTAGTTTCTTGCTCAATCGCGAATCTGCTCCCTGCTATCATCATATACAT
TTCTTTCAAAAGGTAATTAATTAAATCattgagacatttttttaatatag
GGGACTATAAAAAATATGTTCTGTTTGTGTCAGCCGACCGACCAAGAAAT
TGACAGACAAAGATTCCAAGTCTGACAAGTCGGAAAATTGTTGCAATTTT
TCATCGAGCGAGCGAATAAATACTAAAAACTATACTTTGAAATCACCTAA
TTTACTACCGTCATCCTTTACATCATTTACGGTTCGGTTATAACAATCAC
ACCACCCCTGGTCGCAAATGAATAATAAAGAAATGGCGGcttcaaattga
aattgaaatgaaaccGTGCACACCAAATTGCCAAATAAACTGGAATACAA
ATaccattttagaaaaatggacgGTTTCCACATCCATACAAATCTTTCGC
CCGCGGGCACTGcttggggccatccatatagtacatacgcagtgaagggg
gagaggggggtttagcaaaagcttacatctattgtttaaacgacatcatt
tctattgttctctgcgtacgtacacgaccctcgacatggcccgataattc
tcgggccaaaacttttactGGAATGCGCATAAAGCCCGAGCATGGCCCGA
GTTTTCGGGCCGCGGGCGGGCCTCACGCGGGCCACACGCAGGCTAACTTT
TGAAATCATGATAAAcccgcgtgtaatttcaggactgtattttttcaata
ttttctctagaaaaacttgatttcactTAAATATTTGCTATTagactggt
cctggttttaaactttgAAGCGTGGTCCACGAGGAGTTTGTTAAGTTCAT
TTAGCAAGATGAAACGCgacgaaataaattaaaattaacattttcac Run BLAST on NCBI transcript from alignment at scaffold_164:27404..28600 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049665 ID=TCONS_00049665|Name=TCONS_00049665|organism=Clytia hemisphaerica|type=transcript|length=1197bp|location=Sequence derived from alignment at scaffold_164:27404..28600 (Clytia hemisphaerica)
gtgaaaatgttaattttaatttatttcgtcGCGTTTCATCTTGCTAAATG
AACTTAACAAACTCCTCGTGGACCACGCTTcaaagtttaaaaccaggacc
agtctAATAGCAAATATTTAagtgaaatcaagtttttctagagaaaatat
tgaaaaaatacagtcctgaaattacacgcgggTTTATCATGATTTCAAAA
GTTAGCCTGCGTGTGGCCCGCGTGAGGCCCGCCCGCGGCCCGAAAACTCG
GGCCATGCTCGGGCTTTATGCGCATTCCagtaaaagttttggcccgagaa
ttatcgggccatgtcgagggtcgtgtacgtacgcagagaacaatagaaat
gatgtcgtttaaacaatagatgtaagcttttgctaaacccccctctcccc
cttcactgcgtatgtactatatggatggccccaagCAGTGCCCGCGGGCG
AAAGATTTGTATGGATGTGGAAACcgtccatttttctaaaatggtATTTG
TATTCCAGTTTATTTGGCAATTTGGTGTGCACggtttcatttcaatttca
atttgaagCCGCCATTTCTTTATTATTCATTTGCGACCAGGGGTGGTGTG
ATTGTTATAACCGAACCGTAAATGATGTAAAGGATGACGGTAGTAAATTA
GGTGATTTCAAAGTATAGTTTTTAGTATTTATTCGCTCGCTCGATGAAAA
ATTGCAACAATTTTCCGACTTGTCAGACTTGGAATCTTTGTCTGTCAATT
TCTTGGTCGGTCGGCTGACACAAACAGAACATATTTTTTATAGTCCCcta
tattaaaaaaatgtctcaatGATTTAATTAATTACCTTTTGAAAGAAATG
TATATGATGATAGCAGGGAGCAGATTCGCGATTGAGCAAGAAACTACAGT
CAGCACCAAATGATATGGATGTTTGTATTTGCACTATTTGTAATAAATAC
CCACAGGATCAGCAGGAAAAACTACTTTCAGCATCAATAATGATATGGAT
AGTTACAACTGGTAAAAAAACGTGTGTCTGAAGCAGTCAAACGTCAAAGA
TGAAAACAAGACAGAATCTATTAGTTCCATAAAGTTTGAGCAGAATTAGA
TcacacttactaaagattaacATTGTCTTATAGCTGAATAAAttcttttt
gcgaagcgaatgtacatgagcgaagcagttttgctatcgtgtgtgcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049665-exon-scaffold_164-1491911889:27404..28600 | TCONS_00049665-exon-scaffold_164-1491911889:27404..28600 | Clytia hemisphaerica | exon |
| TCONS_00049665-exon-scaffold_164-1510915933:27404..28600 | TCONS_00049665-exon-scaffold_164-1510915933:27404..28600 | Clytia hemisphaerica | exon |
| TCONS_00049665-exon-scaffold_164-1575043694:27404..28600 | TCONS_00049665-exon-scaffold_164-1575043694:27404..28600 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_164 | supercontig | scaffold_164:27404..28600 . |
Blast
The following BLAST results are available for this feature:
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