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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049743 ID=TCONS_00049743|Name=TCONS_00049743|organism=Clytia hemisphaerica|type=transcript|length=1385bp
gctggcacacaacgttgtttcaacgttcatctaacgttatatggacgttg
tgaaacagtgccagctgggtaagctTTATAAGCAtcgttaactgaaggga
cgagaaaacttgttcgagttaaggagatattcgagatataaaggttcgag
ttaaagagactctaatGAACATACCTTATATTTCCCttgtaaaatacttt
tttttctttttaggtcCATTGCAGCTCTGGACAATTGTACAATATTCTGA
AAGGCACATGTGAAAAATTCACTTGCTCAGCTGGCTACTACGCAAGAGaa
aaatattgtatcaaaaataACTCATCCTTTCCTCATTCACAAGACTACCA
GTGGTATCGAGACACCAACCAGGTGGAATACTACCTCACACACGTCTGTG
TCAGTATCAGTGTCTTAGGAGGTGTCCTCCTGATTGTGACACATACCCTC
TTTAAGGAGCTACGGAACCGTGGTGGTTTACTTCTAATAGGACTCTCATC
TGCTATTCTCTTCACAGACATCCTGTTTTTCATTTGTGAGCAAAATAATA
AAGTTGTTGGTATCTTATTACATTGGGGACTATTGGTTATCAATCTGTGG
ACCATCATAATTGCCGTAGATCTTTGTGCAACATTTTTGAGGAAAGGATT
TAGAACTTTCCGCAATACAGTTTCATGGAtggattatttttatttcagtt
tggTTGCTTACGTCACACCATTGCTGATTGTTATTTTATGTGTGATTNTG
GATTATTTTTACTTCAGTTTGGTTGCTTACGTCACACCATTGCTGATTGT
TATTTTATGTGTGATTCTGGATGAAACGAACACTATCCATTTTGGTTATG
GTGAAAATAATGTATGTTGGATGTCCTCATATTATCCAAGGATCATATCA
TACACAATTCCATCGTTGCTTGTGAATTTATCATGTATCGTTTGTCTTCT
TGTCTTATTGATGTAcctcaaaaaacaaaatcaagaacgaaaatcaaaac
tgaaatcGAGTTACCGAGTCAATCTAACTCGTCTAGCTTTGAAACTCGTT
TCTTTACTCGGTGTTATCGAGTTGGTTGGTTTTATACAAATTCCAAACTC
AACATTGACAGAAAACGAAATGAAATTTAACGCGAGTTTCGCTTTCATTT
ACGGCGTTTTACGTTCGTTACGAaatacttttatatttttgttcgtGCTT
ATGGATAGTAAAACGTTGAAATTATATCGCAAATTTGTATCGAGTATGAG
AACGATCAACACAAGTGAAGTTTCAATTCCAGATACTGTTCTGACGAATC
TTAATGCGGCCTCGAGTGTGGCTACAGAGACCAAGtaatgaaaatgataa
tttcTTCTTCTCACAAACTCGGTATGATTTTATTt Run BLAST on NCBI transcript from alignment at scaffold_166:95623..97007+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049743 ID=TCONS_00049743|Name=TCONS_00049743|organism=Clytia hemisphaerica|type=transcript|length=1385bp|location=Sequence derived from alignment at scaffold_166:95623..97007+ (Clytia hemisphaerica)
gctggcacacaacgttgtttcaacgttcatctaacgttatatggacgttg
tgaaacagtgccagctgggtaagctTTATAAGCAtcgttaactgaaggga
cgagaaaacttgttcgagttaaggagatattcgagatataaaggttcgag
ttaaagagactctaatGAACATACCTTATATTTCCCttgtaaaatacttt
tttttctttttaggtcCATTGCAGCTCTGGACAATTGTACAATATTCTGA
AAGGCACATGTGAAAAATTCACTTGCTCAGCTGGCTACTACGCAAGAGaa
aaatattgtatcaaaaataACTCATCCTTTCCTCATTCACAAGACTACCA
GTGGTATCGAGACACCAACCAGGTGGAATACTACCTCACACACGTCTGTG
TCAGTATCAGTGTCTTAGGAGGTGTCCTCCTGATTGTGACACATACCCTC
TTTAAGGAGCTACGGAACCGTGGTGGTTTACTTCTAATAGGACTCTCATC
TGCTATTCTCTTCACAGACATCCTGTTTTTCATTTGTGAGCAAAATAATA
AAGTTGTTGGTATCTTATTACATTGGGGACTATTGGTTATCAATCTGTGG
ACCATCATAATTGCCGTAGATCTTTGTGCAACATTTTTGAGGAAAGGATT
TAGAACTTTCCGCAATACAGTTTCATGGAtggattatttttatttcagtt
tggTTGCTTACGTCACACCATTGCTGATTGTTATTTTATGTGTGATTNTG
GATTATTTTTACTTCAGTTTGGTTGCTTACGTCACACCATTGCTGATTGT
TATTTTATGTGTGATTCTGGATGAAACGAACACTATCCATTTTGGTTATG
GTGAAAATAATGTATGTTGGATGTCCTCATATTATCCAAGGATCATATCA
TACACAATTCCATCGTTGCTTGTGAATTTATCATGTATCGTTTGTCTTCT
TGTCTTATTGATGTAcctcaaaaaacaaaatcaagaacgaaaatcaaaac
tgaaatcGAGTTACCGAGTCAATCTAACTCGTCTAGCTTTGAAACTCGTT
TCTTTACTCGGTGTTATCGAGTTGGTTGGTTTTATACAAATTCCAAACTC
AACATTGACAGAAAACGAAATGAAATTTAACGCGAGTTTCGCTTTCATTT
ACGGCGTTTTACGTTCGTTACGAaatacttttatatttttgttcgtGCTT
ATGGATAGTAAAACGTTGAAATTATATCGCAAATTTGTATCGAGTATGAG
AACGATCAACACAAGTGAAGTTTCAATTCCAGATACTGTTCTGACGAATC
TTAATGCGGCCTCGAGTGTGGCTACAGAGACCAAGtaatgaaaatgataa
tttcTTCTTCTCACAAACTCGGTATGATTTTATTt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049743-exon-scaffold_166-1491911889:95623..97007 | TCONS_00049743-exon-scaffold_166-1491911889:95623..97007 | Clytia hemisphaerica | exon |
| TCONS_00049743-exon-scaffold_166-1510915933:95623..97007 | TCONS_00049743-exon-scaffold_166-1510915933:95623..97007 | Clytia hemisphaerica | exon |
| TCONS_00049743-exon-scaffold_166-1575043694:95623..97007 | TCONS_00049743-exon-scaffold_166-1575043694:95623..97007 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_166 | supercontig | scaffold_166:95623..97007 + |
Blast
The following BLAST results are available for this feature:
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