TCONS_00004865 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004865
Unique NameTCONS_00004865
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1593

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004865 ID=TCONS_00004865|Name=TCONS_00004865|organism=Clytia hemisphaerica|type=transcript|length=1593bp
GCAGTCCAGGCTCTGACATCTGACATCTGACAAGGGTTTTGATATAAAAA
CTCAATAAAAAAGCATTATTTTAGAGTTATTGTTAAAGGTATTAACCTAC
AAACTGAAGAAACATATGAAGTTTAAGataaaaataaaacaaaagttaaa
cAAAATATGGTGTCAGCAGGTGAACTCTTCCAGAAAGCATGCAACCTTAt
ctatttgctttttcaaatgGCAATCATTTGGCCGTGGAGTATGATCAAGT
ATTTCTTgcctaaaaataagaaagacATCTCAGGGGAGATTCTATTTATG
TCGGGTGCAGGAAGCGGTATCGGTCGTCTTATGTCCATCAAGTTTGCTGA
ATTGGGTGCAATCGTCATTTGTACTGACCTCAATGCGGAAACAGCTGAAC
AAACCGCTAACACAATCAAATcAAATGGCGGTAAAGCATATAGCTATCAG
TTAGACGTGACAGATCGTCTGAAAGTGTACGCACTTGCTGAACAAATCAA
ACGTGAAGTTGGTGACGTCACCATGTTGATCAACAATGCAGGTATAGTGA
CCGGGAAGAAGATTTTGGACGCACCTGACCAATTGATGGTCAAAACTATG
GAAGTGAACACCATCTCACATTTCTGGACTTTAAAAGCATTCTTGCCATC
TATGTTGGAGAAGAATCACGGACACATTGTGACAGTTTCATCCATTGCCG
GTCATTCGGGAGCTCCTGCCATGGTGGACTATTGTGCTTCCAAGTTTGGT
GCTGTTGGTATTCACGAATCGTTGACTGTCGAGTTGATCGGTATTCCTGA
CAATAAGATCCAAACTTCTTGTGTTTGTCCTTTCTTCATCAAGACTGGCA
TGTTCGATGGTGTGTCTAGTGGtTCTCCCATCTTGTTGCCACTGTTGGAG
GTGGATTTCACAGTGGAGAGCATAGTGTGTGGTGTTTTGAATGACGAAGA
AACCATCTACGTTCCAAGAATGCTTCTACCTCTCATGATCCTCAAAAAtt
TGGCACCGAGCGCATTGATGAAGCCATTGTCTGATTATTTGAAGCTGCAC
ACACAGATGAACGATTTTAAGGGACGAAAAGAAGGCAAGAAGGCGAAGTA
AAACATCATCTGAACCATTCTCACATTCTTCAAAATTGGCCAATGGGTCT
CAAATGATAGGGGGTATAATGATTAAGGAATTGCTTTATTTACCGTGact
attaaaatgttttttaatgatTAAACTCTTTTCAATATTGCAACTTTTTC
AACGGTTTGCTTGGGCAAACCCATCCAACTAAGATTCAAAATCTCGATTT
TCTTTTTGCGATGAAAGAGAGCTTGCGAAACTTTTACATCTATACATCCA
GATCAACAAAACTAGATGGCAATATTGGTCTTTTCATACACATATTGTGA
AATACGTTGATTCTCTTTACAGTCATTGGATTTTTCAGGGCGTTATTCAT
CTTTTTTGGCAACTTGTAACATAATGCAATTATCTCTGTTTgttcaacga
tgtaaaaataatagataaccaacttgccttgattctcaaaaaacatccgt
gttacggttgtaaaaatattaatgacattttgcatcgtaaaaa
Run BLAST on NCBI

protein sequence of TCONS_00004865-protein

>TCONS_00004865-protein ID=TCONS_00004865-protein|Name=TCONS_00004865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MVSAGELFQKACNLIYLLFQMAIIWPWSMIKYFLPKNKKDISGEILFMSG
AGSGIGRLMSIKFAELGAIVICTDLNAETAEQTANTIKSNGGKAYSYQLD
VTDRLKVYALAEQIKREVGDVTMLINNAGIVTGKKILDAPDQLMVKTMEV
NTISHFWTLKAFLPSMLEKNHGHIVTVSSIAGHSGAPAMVDYCASKFGAV
GIHESLTVELIGIPDNKIQTSCVCPFFIKTGMFDGVSSGSPILLPLLEVD
FTVESIVCGVLNDEETIYVPRMLLPLMILKNLAPSALMKPLSDYLKLHTQ
MNDFKGRKEGKKAK
Run BLAST on NCBI

transcript from alignment at sc0000049:464751..485082+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004865 ID=TCONS_00004865|Name=TCONS_00004865|organism=Clytia hemisphaerica|type=transcript|length=20332bp|location=Sequence derived from alignment at sc0000049:464751..485082+ (Clytia hemisphaerica)
GCAGTCCAGGCTCTGACATCTGACATCTGACAAGGGTTTTGATATAAAAA
CTCAATAAAAAAGCATTATTTTAGAGTTATTGTTAAAGGTATTAACCTAC
AAACTGAAGAAACATATGAAGTTTAAGGTATAAAAGTtgtaatatttatt
tttgtggTTTTCTCCCCTGCCTGCTGGGGGGAAGCGAAGTTAGATTAGTC
AATCTTCGGAATCTTCAATTTAggctagaaatctaagctagtttgattca
gtcaggataaatctgatgttaagttgtgactgaataactagttTAGggat
agcctggatatccagactgcAAACTATTTCACTGTCTAGTTTTTTATTAT
CTTGTCTCttgcagttagtcacactagcatcccgccaaaatgcgtatcaa
agattaatgctgcgaaagcgctatattgtttacttgactctcaagcaaaa
aaatgcgccgcaaaacttctaaagggattcatgaaaaaataacctggcgc
tttttaataacagtcaggcacatccttgCAATTGCACGGGGCgtgcattt
gcaacgggttTTCCATACCCAGTGCAAATGCGATAGGATGCCTCGggcaa
aacatgctaatttgaccTTTAAATTAAAAACGGCAAAAGAGGAAAAAAAA
CGGCAACTTCATTTCTTCTGTAAAATAATCTTCAAATATGTAAGAAAAAA
ATGACCCATTgaaaaaaaatttcatctatccagttttctttaattttaga
tttaatttCATTTAGTTAAAGCGTTCGCTCTCAGATCGCGCGTATATAAA
GATGGCCGGGACATGGGCGATAATATTACGGAGGTACCCGAGCTCCATCT
TTCGTATTTCTCACTATCGACGATGTGAAGTATATTTCTAGAAAACCCGT
ACGAAAAAATAAGTGTAGGAAAtatacaaacatttttttctagaaGCAAT
TAAATTTCAACAAAGGAGTTTTAacacaaatttcagcctcgttaAATTTA
ATGATCTACCTCACTTTCTTTATCAGTGAAATAACTGAGTAACAGGTAAT
AATGACGATTAAAACAAGAGGAGCCAATGGAAACCTAGGTTATATGCACA
CGACCTATGTATTTAGTTCTAGAAAAAGGCCACTGTCCCAGCATTAACTA
AAGAACTAAAAAGATATTGACTAATACTCCAATGTCCCTAACCCCGTAAA
AGACGCGGAATAAGTGAGGGTGGTTAGAAAAAGTCACAAAACTTAATACC
GTAAATCCTGATGATTTTGGCGACTTCGTGATGACTTCGGACTACTTTAC
AGGGCTGTAATTTTTTCATAGATCAAATGAATTACTTTCATATGTTTTGC
AGACacacctgtctcacagccccggtggaactttttcacAAGCGGGGATA
AAAAAACTCTACTGAAATTCCAATTGggatggaaattctattgtgccaag
attaaaaaatccagtggggatgctTTCgcagtgcaatttttaaatattga
attttgaaaggcAATGAAATTAAAGTAATTTTCTCAGTGGGACTAAAATT
CTAGGATATTTTCCCACCGGtgacaaaattgttgtcaaattttccagtgg
ggttggGATCCCAGCGAGAGGGAGGGAAAAATACCCAGAAtaatacatcc
ctgtctcatacGAGtggtaatttttaaatttcttgtctctctgtctcaca
acgaaatgaaaaatacaaattgcacccctgtctcatgCGAGAGGGTTTTG
GCTCTCTACCTATCTGTCTAATAACgattgaaatacgcattatatATCTG
TCACATGCGTGTAGCATCTTTTACTCTCCACCATGTCTtacaataccgag
tttatgtattggaggatatcgagggcgacggtaaatgaaatcaatacaaa
ataaagtcgatagttgatgaacggctctatatcgcctttgctcacctaaa
cagacgacggtatcttggtgtttttaccgtcatcgagcaaagtggacggc
gattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNccccccctcgatttatctcgaatacataaactcgc
taatgacgGGAAGAATAAGGTAGAATGTCGCCATAATCACCTTATGTGGA
TTAGTTTTTGCCTATACTTTTTTCACGAATTGAGAATTTTAAAGTGTTTG
CGATTTTTTTTGCAAGGACTAAATGTCGGGAAAATGGCTCAAATTAACCC
ACCCAAAAGAATACGATTTCAGTCAATGACTAAATGATTCTAGAATTTCG
TCGGTTTCGCCTGGTTTGTTGAGTGGTGCAAATTCTTCGTTTAACTAGAT
ATTTCTATTAAGTATACCCGTCACCAGCCGAAACTTAACGTTATTACAAC
GTTGTAACGCCACTCGATTGACGTTCAAAAATGATAGAAAGGTTTTTGAC
ATGATGTTGTATATCATCTGTTTCATACTTTTATCGGTTAAGATGTGATT
CAGATTATACTGGTAGGAAGGTGGAATGATTTGAAGATGTCGCTTTTCTT
TCAAGGTATTCGAAATCGATACATCGAGTAATGGTACAGCTAATCAAATA
TCCGAATTGAGAAGTTAACATCACACGCGTTAGATCACACAGTATACAGC
AAATTATAAAAGTAAATTTATTTCGTGCTTGGAAGTTTTTACTTGGTTTT
ATGCCTTTTATCGTCGTTCTTTATAccgttttttcaaaactaagAAAGAT
ATTATTGGCGTAGCATATGTCTTCTTCCTAGCCATTAAATAAGGTTACAT
CTTGTCCATTTCCAGCTTTTTGACAATAATATTTGTGTTTTAGGTAATAT
TGATGATTCGTGGGAAATAAATGGCATAATGGAGAATTCCGTTAGAGGGA
ACAAAAGTTTACAGGTAAGTCTTAGACAAGATTGAAACCCTGCACAAAAT
GTTTCCTTTGGATAATGAAAGTTGCTTTACCTTACTGGGAGTATGCAATT
CATATGTCATATTTACAATgagcacccctgtctcaatttcCGTAAACCAT
GTTTTGGTCGATTAGTTTATATGCTTAAAATTTCATAGGGCCAGTTGAGA
ATATCTATTgaaaaaacagacaaaaaacaCCTGTCTCAGTAAACCGATGC
AGTTTTTAAAACCACTGGGGTGggtataaaataagaaatttcattatttt
gtaaAAGCAACTCCAATTTCGGGTCAGGGCCTgatgcttattgggtcaag
ggctatcaTTATTGCCATTGTTAGATCATTTAAGAAACTTTTACTTatta
gcaacctggttgcttaaaatgaaaaatgtgtAATAAATTTGATCTTAAGA
TCATTGGGGTTAGGGTGAGAGACTTTAACTCGCCTTTTGCCGGAGTGAGG
AAAACATATTTCATTTCaaagcattatttttttcaatttttacaagGCTG
CTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNTCTTCCCTTAAGTCCGGCTTACGTTTTGTAGTATTTTCGCCGCGC
GGCTTAATCTACTCATTACAAAGGCCTTGACAGGAAAAGGGTTCTTTTGA
TTCCAAGAATAGATATTTAAAGCATTTTTCCTTCTGGTATCCCTCATCTC
CTTGTTTCTTAACCCGAGcaatacaaaaaattatttaagaATAGGATTAA
TCCCCTGAAATCTTCCTTTTTCGAATTCTCCAAAATCTTCACCCCGTGCA
ACTACAACTGGTTATATTTACCCGATGCATTTGCGAAGggtattacgtca
ctttcgttttctaccCGTTGCATTTGCAACCGATCGCATTCGCGAATAAC
CCCGTGCAATTGCAAGGATGTGCTAGACTGaataaaattaacattttcaa
aaactttgagaaattgaaattgcctaaaatttgagccatagatgaaaaaa
tttgacccaagccaaccttgaaaactaatttgaagatcaacttcccaaga
aaaagatctacgggggaggcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNaattatttttactttagtgtataa
acaaggccttaaaaatcgaagcgctgtctcgggaattgaatgacaaattt
tggttggttgattttggctgctgcacgttttaattaattgtcttgcgaac
ttgattcaggttactctcatccttgttgtgcaaatacatcctgtagatga
ctgatgttgttttttctaaaagctagatttcctagtgtgactaactgtct
tgTTTTACGGTCTGGTCTAACTCGTGATAGTAGTtgtgtccctgcatatg
cgagtgtatcTTATTGGTCGATTCGCTCTGAGAACAAGTCACTGAGGAGA
ATATTTGCGggcttttcaatatttttctatgcgcgcacataatttatgga
aaaaagctgacattgcaaaatgatatataaacaaatgaaaatgaaaacac
aggttcatttctaaacaaaatggccgctggaaaggagcctttataaatgt
ggctgatgttggtaaaagaggttttatggtaagttaattatgtaagtaag
taagtaccgtgagtggtcctaaatccgacagccctgcctaaatccgaccc
cccaaataactgctatgaaaaaaaatgtttacaaacatttcctctccaag
ttgaacaataaactattgcaagaaatctcgaaacaaaacatctaacagag
gcggatctgggatttttttgagggggttcaaaattctcttttcaaaaaaa
aattttcggaacaaacgttttgggcgtaaattttgcacccgccctgtttg
ggcggtgtcacattttttccattcaacatggGGGACGTTGATGAGCGCCT
GCACGTCTGCAGTTCCCATTACCTATGAACTCCAAACATAGGCCTCAGcg
ggggaccattcaaaaagtatgtacgctcgaaaaaggcaaatttttgactc
cccctcccccttgtacgcttaATGTGTACCCCCTCCCCTTCAGCGTACAt
acgctttttagtacaccccCCTAACCAAAGTTGAAACTTGtaactcttgt
aacagtagaatatgtaggtatccaatcctgtttataacaaagtctcaaga
aattaaaagaatctataagatgaacaaaaataccagaggagaaatgaaaa
taacaatcgcaaaaaccattctttgatgtgaaaatattgcgtttttctct
caaaaaagacagtttaggaaaaatttgagcgtacgtacttctcctcaagg
acccccctccccctcgtacgcttttgggagtacccccctctcgagcgtac
gtactttttgaatggtcccatgCGCTGAAAGGAGGGTGGTTGGCCTCTTT
TTTTGTCCCGGCTTGAACAGCCAGACGCTGAACGTGTAATAatcgtttgt
ggtgatattcatatatacattgggaaattccctaactgcaactgcgcaca
tctagtttcttcttttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AAAGGCCTTTAGTGCggtataaacaaatgatttcattggtttaaaaaagt
caaaacatcaagCTATATCACGTGATCAGAATCATGATTGGACTAAACGG
AAGCCGTGGTCATATGTCATATGATATTTTCCCGCGTTTTAATTCGGCAA
AGTTTAGTAAACTCAACCACgtatcaatattttgatttttcaagcgggat
ttctgtagaatgataaaatatggTTTGGCTGGAATGGACACCATAACAGC
AGTGCACGGTAAGTAAGTAAGCAGGGATTTTTCCAAGCACCAAGTAATGC
CTCCGTTTTtactttcaaattgagtttttaacAAAGGCGTAAGCCGCGAT
ATCAGAGGTTGGGGGCGCCTTGAGCCCCTCTGTGGGTCTAGGGCTAGCCC
tggtggggggggggttcagaaAGCTGAGCATATTTTTGTCTTAACTAGCA
CTttaaaatggttaaaattgaatgaatttatagaatttatcaatgaactc
aatttgaattgagtttaatGCCACCGTCTAACGGGGGCATTAGGGTGCTT
GgaaaaaacactgatttttNcaatttgaattgagtttaatACCACCGTCT
AACTTGGGTGCTTGGAAAAAACACTGAGGGGTAATTTATTATTTAGAAAT
CTGTGGACAAAAAATGTGCGTCTGCCTGCTGGGTTTccaaagtctgtcaa
caagggttcactcacatacatacaggctagctctaaagctctacaACAGC
ATATAATAACATGAAAAAAGGACAATGATTCTttgatgggaatcaaaact
ataaagtgcacttacaaacatcaatatgtcagatctaacaaaatagcagc
ggcactgtcatcattggcAATAAAACAatggattttctgtcaagagtctt
gtaaacattccaacaactttaATCAAAATTATCCGTCACAgctgagtcta
ccatttttaacacggtCCAAGGATTGAACCGAGAACGCTTGCAGAACGCT
TGCAAGCTCCCGCACGGGTGAAAAATtaaatctgtcaatcattttctcaa
gcgcaAAGTgcgcaaagcgattctagctttacaatagtgccgcggatcat
cattggatattattcaattatcattatccctatattttcattcctagaac
ttttgcaataaaaaggaaaaatagaaaagttgtattttttactgctctat
tcacatactgaatttgaaagatcttttgcaaacttcaaaaaactgatttt
tgtctcCCCCTTTgcaggactttggcttaagtgcttgtgtgcagcatagg
gtacaaagtccaaatatgcatttcctgtaatttttgtatgaagagttagg
tctatactgacaTATATACAgacagtatcaaacaaactgtatcagacttt
attagttgcaccagactctaaaattttaaaaacttagtatgttgaggtaa
gaggggttggtgtaatttaagatgcatgATCTAACCATTTACAATTCACa
atgcgcgatccatgcataaagtatgctgattattcataataattatcata
aaactttaaTTATGTtgcataattctaaaacaatagcataatcttttctc
gcttttgtttaccacggtaaatttaagtaaatttatgcaacaaaaacgaa
ataaGTAAGCAATGAAAGTATATACAAATAATTACGAccttaaaattatg
aaaaaacttaCATAATGTTGACAATGAAAacataatcttacaatagagaa
tctgctaaattacgtgggttGCATGGGTGCGTGGGTGcatgggtcaatat
ttttgcgtgggtcatttttttgcatggGTCAATacttttgcgtgggtcat
ttttttgcatgggtcaaaatttttgcgtgggtcattattttttgcgtggg
tcaatattttttgcaTAGCTCTCaagtcttgaaaactttttactttACTT
TAATGTTGTCGTCTCTTGttgtaaaagattttcagaATATATAACCAAAG
GAAAATATTtggatatttttctttctatgAGTTCCATCTTCTTCTAGCTG
TTTTCTGATGAAATAATTACAGATATCCATCGTTTACGAAAAATTAGTTT
TATCCCACTTTTATAGTCAGTTTGGACTGTTTTCCAAGTGAACTTGATGT
AGGATTCAGACTCGTGAtatttacttctttttttaccatacaccccttct
cacagacccactgggaccacTTCCCACTGAGAAAATTGGCCAGAATATTG
TCCTCAGTGGAAAATTATGTCTCAATTTTTGTCCACACTAAAGATAATCA
AAGAATTCTTTatgataatcaaataaaccaatcctttctgcaaaatatta
tgctatttttccaatccccactgaattctctgacttgaaaacaaaagaat
tgaaatcccatgccattaaaaaactatggaaatatcaatccccatcaagt
ttaaaaaaagtccGTTTTTTTCTATCCCAACTGGTTGAAAAATTCCAACG
GGtttgtgagaagagggtgtcaCCATGGTGAACTGTATGTACTAACAGCT
CACTTAAGAGTGAAAGTATCTTTGTACAAGCTACCTAGGGACGAAacact
aaagaaaaaaaaaacaccaaaagctGGTATTTTTAGCACAAAGTCATCCT
AGGGCTTGCGCCGCATAGACTACTGTTAAGGAAGACGCTATCCAAAACTT
GTTCAATCACAACAAAGATAAACAACCAACTAAAAGAAAGTCGAATGAAA
GGAGAGCACAAGAAAAGGCTAAACTTCAGGTCCATGAAGGACCCATCCAA
CATCATCAATTAGTACAAAGCTTGTGTCAATTGAATAAATAGTAAACCCA
AACGATATCGATGAAACTCAGGATGTTAATCCAATGCAAACTGGAAAATG
AACTTATTAATGCACTGCACTAACGGATGAATTGACAGACCcatcaatca
aaaaaattatttgccaTAGTTTTTTCAGGTGATGGGAGAACTCAGCGATT
ATTTTTTCTCAATCTCTTGAAAACCCACCATGAAAACTGCCTGTATGCTA
TGTATCTTAGCAATCTATTCGATGGACATTTTTGGGAATTGTTGCCTATC
AATAATGGACTGAAAGTCTCCatgatcaaatttttcattgaaacaaTCCT
AAACTCTCAATTCTACCTTCAGAACAAGTTTCATAGTCTTTTTTGTCTTT
GGATGAAGAAATGTCACTCTTGCTTACTCGATACTTCTCGTTCAGGCTCA
TAGAGATAGAGATTAAATGTCTTCATCTTGTTAATGAGGAGATCCATATC
TCTCTTGCATTCTCCATCCTCTCTCTCAGAATCATTTTCTCTCTCAGAAT
CTGCCTCATTTCCACTGATATCATATTCTTCATAGCTTGAATATATCGCT
TTCCAAGTCAGAATACATTTACCCAAGTATTCAAAAAGATTATAGTACAA
ATTTATCATAATTAACCACTCCTTTCTTCAGTTTCTAGCAGAAATAACCA
CTTTTCTACCCAGGAAAAGGTTTATAATTCACTTCAGTAAACACAGCTAC
AGTTTTTAACAGCGTCTGTGATGTCAGCAAAAGGTCTCGTTTAAAAGGCA
TATAAAAGTGAGTGGCCTTTTAAAGGAAACGAATAATCAATTAGTTTTTA
ACAGTTTATATCTCTGTGTGTCTTTTTAAAAGGAGAATCCAATAAGACAg
atattaaaaaatgaaatttttaccgAACCACTCCTTTAACTAGGCTTCAA
TTAGCATAGCGCTTTCATCAACTTCACCTCGCAAAATGCGGGAGGGCAAT
CTATATTAATCCAACCTCGGCCTCGAGCCTGACCCTGACCCTTGAGAAAG
GCCGACCACTCGACCCTTGGGAAAAAGCTGATCCTCAActcaaatacaat
aaaaagccaACCATGGGTAAAATACAGTTTTTTGGCAGTGTCTTAAAATG
AGATTGACATATCCTAATATTAAAAATTGAGCAGACAAGCAGGGGGTGGG
ATacacacgctttttttacaagaatatgTCAACTTCGTCGTCTCTGGTTT
GTATTATCtgctttttgatgttttaaacTGGAAGATAAGATTAGGCCTGG
AATATGCGGATACAGTATAAGTCAACAACTTTATGAGTTTTTAATAAGTT
AAGCCTGGGATATACGGATACGAGGCTGATTATACATGTTGGTCAATAAT
AAGATACCCCCGCCTGCTGGGGGAGGCTTGTAAGAATAATAAAGTATATT
ACTTGTGAAGAATGATTTCATCCTCCTTCCTCCCCCCTCCCACCGACGAC
TATTCTTTAAGTATTCTTTAAGTGTTCTAATGATCAGTTTATGGAATATT
CATCCAaagaaattcttataaaagtcgctaaaaacgtagtggtctaaaga
aacgactattcttttttagaatcaaccttacaatctagtttttatattta
taaaaactagattgctgacgtgtgaaaAGGAATGTCGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNcatcaaagcgggaactaattttcttctcgtttctttctttccttttt
ctttctcataacttcaagctttccctcagactctcccaagcgtggttagc
tcatgTGGTTAGAGCATCTGTCTCATAAgcatgggtttccgagttcgatc
cctgtgggtgtcaaatttttcaattcttcaaatttcttattttaattctc
tttctattaaaatgaaggtcaatcaaacaagtaactagcatatattacct
ccgctctctgtgtaaggtttagataagctatgatagcatcacttaataag
aactttttaaatttttttttttcttcaatcttttttttaccacaagcgat
tattcaaggctgagatatagaagaacggttataggcgtttgcgcctgcgt
ttggtgactgacagtttctgtttcactactttcactttcactttcacttt
cagccagtGAGTGAGCGAGCATGATAATtgatttccgggtcaaaatattt
gacacttgatccaatcgtttgcttatctttcttaTCGTCATTTGAATTTC
ACTATTcagtgcttataaaatacggttgttataaGGGTATCAAACTCCTC
ACTAagagggaacagatcatagattcaaattgaacgcgtaattactaata
gcAATTAACATTACATAACGCgtcgatatctcttcactcccatgaaatgt
gattcaaaattaaagtgatgagcacgaaaacaaaatcaagaattggaaaa
tttgacatccagagggatcgaactcggaaacccatgcTTAGGAGACAGAT
GCTCTAACcatttgagctaaccacgcttgggatagtctgagggaaagctt
gaagttatgagaaagaaaaaggaaagaaagaaacgagaagaaaattagtt
cccgctttgatgttattatcgaaacaaaaggatcaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcacacgtcagcaatctagtt
tttataaatataaaaactagattgtaaggttgattctaaaaaagaatagt
cgtttctttagaccactacgttTAAAGCAACTTTGgcttttattgtattt
tggtcggCCTTTTTCCAGGGCAAGTTTATGTATTctagataaatcgaggg
ggacggtataaagcaaagttgaggTCTCCAAAATCACTGTCTACTTTGCT
TGatgacggtaaaaacaccaagataccgttgtctgtttaggtgagcaaag
gcgatatagtgccatacatcaactatcgactttgttttgtatcatttcac
gTATAGTCGCCCTCGATACTCCAATACATAAACCCAGTATAGATTGCCAT
GCGGGAGAGCTTCAAGTCAGAAAGAATAATAATTTGTAGAAAATGAATTT
GTCAATACATTTATAGTATTTATAGGTGAAAATGAATTTGTCAAGATTTT
GTAGAATCTTGAGGAGAGCCAGATGTTCCCGCATTGAGTGCGAGTAGGCC
TCCATTCTACGCGGGAGTATATGGTTCTCCTCCGTAACGTATTTAATATT
TCTCAATGTTTCGTGCGTGTCTATTGTCTGTTTTATATATTGTCTTTGTC
TTGTCTTGTCCCTTGTGAATTTgtattgtgacgtcacttaATGTTTGTGT
ACATGCTTAGTTCTTTGTTGGGCTTGCGTCTTCTGTGTGTTTTCCAGTGC
TTCGTTTTCAGTGTGCTTTTGTTTGGGGGTTTGcgtcttttctgtttgcc
agcCTTTCGTTTCTTTGGGTCTAACTTAGgatattttcagtttcttgtAA
CTAGTTTATGGCAAGTTTTCTAACTTTTAATTTTGTGCATTTGTTTTTAG
CGTCCCTGAAATATATGGTCAGAATATACTCATCGGGATCAGTGATATAT
TCCTCGCTACTGCGTTAGCAGTaacatatagtttgttcttataaacaaaa
gtGTACCCAGCTTATGTTTGAAATGGTCATATTTCAAATGGAATATTTTG
TACAAAACATTTCTATTGCATACAATTTCAGATTATGTTATGAATTTAAA
TTGTTATGAGTTTGTTACAATCTTCTGGTTTATAGTTTATGACATGTGAC
CTGTGTCTGTAACCTGTgtctgtaacctgtgacctgtgacctgcgatgAA
CTAATCGCAAAAGTGGCTACTTATCGATTTTAACCAAAGAATTACAAGTa
gagaatgaatgaatgaattatttcatagtttttaaaatagataaaaataa
aacaaaagttaaacAAAATATGGTGTCAGCAGGTGAACTCTTCCAGAAAG
CATGCAACCTTAtctatttgctttttcaaatgGCAATCATTTGGCCGTGG
AGTATGATCAAGTATTTCTTgcctaaaaataagaaagacATCTCAGGGGA
GGTAAGATCTTTATTAAAATTAatataaatcatttttgaaacagTTTTTC
CTCAAAATGCATAAAGCTATAAGTGGCACCTGGGCCTCAAGTAAACCAGA
AAAATGGTAATTAACGTAGGGTAATATATGGCATTATTTGCTATAGGATT
TACGATATGATACGTTAATTACTTGGTTGTTATTTCAAACTTTTATCATT
TTAGATTCTATTTATGTCGGGTGCAGGAAGCGGTATCGGTCGTCTTATGT
CCATCAAGTTTGCTGAATTGGGTGCAATCGTCATTTGTACTGACCTCAAT
GCGGAAACAGCTGAACAAACCGCTAACACAATCAAATGTAAGAGAAATGA
ATTATTCAAATATTCAAGTCGTACTGAAGTTTTTCCTTGGGATATTGGAT
TATTCCAAGTCGATTTCGAAAAgtaaaaacctaaaaataaggAGCAGTTT
GGATCTTCCATTCattatttgatctttttctttgattttcagcAAATGGC
GGTAAAGCATATAGCTATCAGTTAGACGTGACAGATCGTCTGAAAGTGTA
CGCACTTGCTGAACAAATCAAACGTGAAGTTGGTGACGTCACCATGTTGA
TCAACAATGCAGGTATAGTGACCGGGAAGAAGATTTTGGACGCACCTGAC
CAATTGATGGTCAAAACTATGGAAGTGAACACCATCTCACATTTCTGGGT
AAGCCTTATCATCCTCTCCTGCGCCGTGATTGATAAGTCCTgagttgttt
atattttatGCTTGATGTATCCAGGAAGAGGTTATGGCAGAATAAATACA
CATCTTTTTTTGTTGCAGACTTTAAAAGCATTCTTGCCATCTATGTTGGA
GAAGAATCACGGACACATTGTGACAGTTTCATCCATTGCCGGTCATTCGG
GAGCTCCTGCCATGGTGGACTATTGTGCTTCCAAGTTTGGTGCTGTTGGT
ATTCACGAATCGTTGACTGTCGAGTTGATCGGTATTCCTGACAATAAGAT
CCAAACTTCTTGTGTTTGTCCTTTCTTCATCAAGACTGGCATGTTCGATG
GTGTGTCTAGTGGGTCAGTATATGTTTTGTTATGATAAAAACAGCTTGTC
TTTTCCTCTTCGACAGTCTTATGCCACAAACTACAGCATTGATGGGTTAC
CTTCTTTGATCTCAAATACGTCGAAATTCTtcacttttaacttttgaaaa
ataaaagtgtCATAATAAGTATAGGCAAACAATCAGTGTTCAATGCCATG
TAGATAACTTTCACTTGGTATCTAACAggtattttttattattatttagt
TCTCCCATCTTGTTGCCACTGTTGGAGGTGGATTTCACAGTGGAGAGCAT
AGTGTGTGGTGTTTTGAATGACGAAGAAACCATCTACGTTCCAAGAATGC
TTCTACCTCTCATGATCCTCAAAAAGTAAGCTTCGTTCCATTCTGTccca
aaacaaaacttttaccggctgtttaaaaaaacgtgtatcgtaATACTGAA
AAAACTGTTATCAATCTGAACTTTTTGgcattgaaaaaaagaattcaaac
gttcattttgagctattataaaTTTGGTTCGGCCGCTCAAAACTTATAAA
TTTATAAAAGTTATCCTTCTGTATCCTCTTTCACTAGAAAATAGTGTGAT
TTTTGTTGTGACATAATTTAAAGTATCAATGGCTGTAATGAAAATACTTT
TCGgtcttcttctttcttgtttattttgttaatCTTAACATTGGAAAATC
ATTGGAATCTTTGAATGTTCAGTAGGTATGAAAAAGACTTTTAAAGACtt
aatcaatttgaaatttcgtaACCCTTTTCTTAATGATGTTTTTTGACGAA
ATTTCTTTCGTAATCTCGATATATTTTTTGGCGGGAGTaccaaatttaat
gtataattaGCTCACAATTCAAGCCTTCCTTCTTTCCAATGGTGAGGATT
TTTCAAAGACTAAGAAAGTCGATTCTTCGATTTCTAATAAGGGCTTGGCA
GTGAACTTGGAAAGTGTCAGGTTTTACATTTGGTAGGGTCGAGGTTTCAG
CTGTTAACGTAAAACTATACTTTAGCAGTGCAgacttttatgattttttt
tacctttttctcGAAAGTTGATGTCTTTTCTGTCgatttgcaaaagtttt
ttaCATCCAcgaaaacttttatcaaaatttgacactaaaatgttcttaat
catGATATAACTCTAACGACTTTAAGTATTTCAGTCCTAAAACCTTTTGA
TAGTAAGTAAAAAGCACATATCAAATCTTAAAGGATCAAACTTTGGTAGG
ATAAGTTTCAATTTTGGCATTCATGTCATGTGATTCAggcatttatcaaa
aaaaatcgttaaaattGCTAAAATCGCAAATTTCACATTAAAGAGGGTGA
GGTTTTCTGACAGTATGGTCCGCGGAAGTTTATCCTCGACAGAAATTATA
TTTCCTTCcaatttgggaaattttttacTAGTTAAAATTTGTACAGCCAA
AGTACAAATAGATTACTTTAAATAATCTGGCGTACGTCCCTCTTGACCAT
CAAGGGGTTTATCTATATCGCCTATGATCACAGAGATCTTTCTCAATTCA
AATTCAGTTCGTCTAAATATTTCATTTGTCACCCGAAAACTAAATTTCTG
AAGAAACAATGGTAGGGAAAAGAGTTTTGAAAATCCCCTGGAACAGTTGG
ATGTAAAAATTGACttcgtttttgttttgtttttcagttTGGCACCGAGC
GCATTGATGAAGCCATTGTCTGATTATTTGAAGCTGCACACACAGATGAA
CGATTTTAAGGGACGAAAAGAAGGCAAGAAGGCGAAGTAAAACATCATCT
GAACCATTCTCACATTCTTCAAAATTGGCCAATGGGTCTCAAATGATAGG
GGGTATAATGATTAAGGAATTGCTTTATTTACCGTGactattaaaatgtt
ttttaatgatTAAACTCTTTTCAATATTGCAACTTTTTCAACGGTTTGCT
TGGGCAAACCCATCCAACTAAGATTCAAAATCTCGATTTTCTTTTTGCGA
TGAAAGAGAGCTTGCGAAACTTTTACATCTATACATCCAGATCAACAAAA
CTAGATGGCAATATTGGTCTTTTCATACACATATTGTGAAATACGTTGAT
TCTCTTTACAGTCATTGGATTTTTCAGGGCGTTATTCATCTTTTTTGGCA
ACTTGTAACATAATGCAATTATCTCTGTTTgttcaacgatgtaaaaataa
tagataaccaacttgccttgattctcaaaaaacatccgtgttacggttgt
aaaaatattaatgacattttgcatcgtaaaaa

Coding sequence (CDS) from alignment at sc0000049:464751..485082+

>TCONS_00004865 ID=TCONS_00004865|Name=TCONS_00004865|organism=Clytia hemisphaerica|type=CDS|length=5670bp|location=Sequence derived from alignment at sc0000049:464751..485082+ (Clytia hemisphaerica)
ATGGTGTCAGCAGGTGAACTCTTCCAGAAAGCATGCAACCTTAtctattt
gctttttcaaatgGCAATCATTTGGCCGTGGAGTATGATCAAGTATTTCT
TgcctaaaaataagaaagacATCTCAGGGGAGATTCTATTTATGTCGGGT
GCAGGAAGCGGTATCGGTCGTCTTATGTCCATCAAGTTTGCTGAATTGGG
TGCAATCGTCATTTGTACTGACCTCAATGCGGAAACAGCTGAACAAACCG
CTAACACAATCAAATcAAATGGCGGTAAAGCATATAGCTATCAGTTAGAC
GTGACAGATCGTCTGAAAGTGTACGCACTTGCTGAACAAATCAAACGTGA
AGTTGGTGACGTCACCATGTTGATCAACAATGCAGGTATAGTGACCGGGA
AGAAGATTTTGGACGCACCTGACCAATTGATGGTCAAAACTATGGAAGTG
AACACCATCTCACATTTCTGGACTTTAAAAGCATTCTTGCCATCTATGTT
GGAGAAGAATCACGGACACATTGTGACAGTTTCATCCATTGCCGGTCATT
CGGGAGCTCCTGCCATGGTGGACTATTGTGCTTCCAAGTTTGGTGCTGTT
GGTATTCACGAATCGTTGACTGTCGAGTTGATCGGTATTCCTGACAATAA
GATCCAAACTTCTTGTGTTTGTCCTTTCTTCATCAAGACTGGCATGTTCG
ATGGTGTGTCTAGTGGtTCTCCCATCTTGTTGCCACTGTTGGAGGTGGAT
TTCACAGTGGAGAGCATAGTGTGTGGTGTTTTGAATGACGAAGAAACCAT
CTACGTTCCAAGAATGCTTCTACCTCTCATGATCCTCAAAAAttTGGCAC
CGAGCGCATTGATGAAGCCATTGTCTGATTATTTGAAGCTGCACACACAG
ATGAACGATTTTAAGGGACGAAAAGAAGGCAAGAAGGCGAAGTAAATGGT
GTCAGCAGGTGAACTCTTCCAGAAAGCATGCAACCTTAtctatttgcttt
ttcaaatgGCAATCATTTGGCCGTGGAGTATGATCAAGTATTTCTTgcct
aaaaataagaaagacATCTCAGGGGAGATTCTATTTATGTCGGGTGCAGG
AAGCGGTATCGGTCGTCTTATGTCCATCAAGTTTGCTGAATTGGGTGCAA
TCGTCATTTGTACTGACCTCAATGCGGAAACAGCTGAACAAACCGCTAAC
ACAATCAAATcAAATGGCGGTAAAGCATATAGCTATCAGTTAGACGTGAC
AGATCGTCTGAAAGTGTACGCACTTGCTGAACAAATCAAACGTGAAGTTG
GTGACGTCACCATGTTGATCAACAATGCAGGTATAGTGACCGGGAAGAAG
ATTTTGGACGCACCTGACCAATTGATGGTCAAAACTATGGAAGTGAACAC
CATCTCACATTTCTGGACTTTAAAAGCATTCTTGCCATCTATGTTGGAGA
AGAATCACGGACACATTGTGACAGTTTCATCCATTGCCGGTCATTCGGGA
GCTCCTGCCATGGTGGACTATTGTGCTTCCAAGTTTGGTGCTGTTGGTAT
TCACGAATCGTTGACTGTCGAGTTGATCGGTATTCCTGACAATAAGATCC
AAACTTCTTGTGTTTGTCCTTTCTTCATCAAGACTGGCATGTTCGATGGT
GTGTCTAGTGGtTCTCCCATCTTGTTGCCACTGTTGGAGGTGGATTTCAC
AGTGGAGAGCATAGTGTGTGGTGTTTTGAATGACGAAGAAACCATCTACG
TTCCAAGAATGCTTCTACCTCTCATGATCCTCAAAAAttTGGCACCGAGC
GCATTGATGAAGCCATTGTCTGATTATTTGAAGCTGCACACACAGATGAA
CGATTTTAAGGGACGAAAAGAAGGCAAGAAGGCGAAGTAAATGGTGTCAG
CAGGTGAACTCTTCCAGAAAGCATGCAACCTTAtctatttgctttttcaa
atgGCAATCATTTGGCCGTGGAGTATGATCAAGTATTTCTTgcctaaaaa
taagaaagacATCTCAGGGGAGATTCTATTTATGTCGGGTGCAGGAAGCG
GTATCGGTCGTCTTATGTCCATCAAGTTTGCTGAATTGGGTGCAATCGTC
ATTTGTACTGACCTCAATGCGGAAACAGCTGAACAAACCGCTAACACAAT
CAAATcAAATGGCGGTAAAGCATATAGCTATCAGTTAGACGTGACAGATC
GTCTGAAAGTGTACGCACTTGCTGAACAAATCAAACGTGAAGTTGGTGAC
GTCACCATGTTGATCAACAATGCAGGTATAGTGACCGGGAAGAAGATTTT
GGACGCACCTGACCAATTGATGGTCAAAACTATGGAAGTGAACACCATCT
CACATTTCTGGACTTTAAAAGCATTCTTGCCATCTATGTTGGAGAAGAAT
CACGGACACATTGTGACAGTTTCATCCATTGCCGGTCATTCGGGAGCTCC
TGCCATGGTGGACTATTGTGCTTCCAAGTTTGGTGCTGTTGGTATTCACG
AATCGTTGACTGTCGAGTTGATCGGTATTCCTGACAATAAGATCCAAACT
TCTTGTGTTTGTCCTTTCTTCATCAAGACTGGCATGTTCGATGGTGTGTC
TAGTGGtTCTCCCATCTTGTTGCCACTGTTGGAGGTGGATTTCACAGTGG
AGAGCATAGTGTGTGGTGTTTTGAATGACGAAGAAACCATCTACGTTCCA
AGAATGCTTCTACCTCTCATGATCCTCAAAAAttTGGCACCGAGCGCATT
GATGAAGCCATTGTCTGATTATTTGAAGCTGCACACACAGATGAACGATT
TTAAGGGACGAAAAGAAGGCAAGAAGGCGAAGTAAATGGTGTCAGCAGGT
GAACTCTTCCAGAAAGCATGCAACCTTAtctatttgctttttcaaatgGC
AATCATTTGGCCGTGGAGTATGATCAAGTATTTCTTgcctaaaaataaga
aagacATCTCAGGGGAGATTCTATTTATGTCGGGTGCAGGAAGCGGTATC
GGTCGTCTTATGTCCATCAAGTTTGCTGAATTGGGTGCAATCGTCATTTG
TACTGACCTCAATGCGGAAACAGCTGAACAAACCGCTAACACAATCAAAT
cAAATGGCGGTAAAGCATATAGCTATCAGTTAGACGTGACAGATCGTCTG
AAAGTGTACGCACTTGCTGAACAAATCAAACGTGAAGTTGGTGACGTCAC
CATGTTGATCAACAATGCAGGTATAGTGACCGGGAAGAAGATTTTGGACG
CACCTGACCAATTGATGGTCAAAACTATGGAAGTGAACACCATCTCACAT
TTCTGGACTTTAAAAGCATTCTTGCCATCTATGTTGGAGAAGAATCACGG
ACACATTGTGACAGTTTCATCCATTGCCGGTCATTCGGGAGCTCCTGCCA
TGGTGGACTATTGTGCTTCCAAGTTTGGTGCTGTTGGTATTCACGAATCG
TTGACTGTCGAGTTGATCGGTATTCCTGACAATAAGATCCAAACTTCTTG
TGTTTGTCCTTTCTTCATCAAGACTGGCATGTTCGATGGTGTGTCTAGTG
GtTCTCCCATCTTGTTGCCACTGTTGGAGGTGGATTTCACAGTGGAGAGC
ATAGTGTGTGGTGTTTTGAATGACGAAGAAACCATCTACGTTCCAAGAAT
GCTTCTACCTCTCATGATCCTCAAAAAttTGGCACCGAGCGCATTGATGA
AGCCATTGTCTGATTATTTGAAGCTGCACACACAGATGAACGATTTTAAG
GGACGAAAAGAAGGCAAGAAGGCGAAGTAAATGGTGTCAGCAGGTGAACT
CTTCCAGAAAGCATGCAACCTTAtctatttgctttttcaaatgGCAATCA
TTTGGCCGTGGAGTATGATCAAGTATTTCTTgcctaaaaataagaaagac
ATCTCAGGGGAGATTCTATTTATGTCGGGTGCAGGAAGCGGTATCGGTCG
TCTTATGTCCATCAAGTTTGCTGAATTGGGTGCAATCGTCATTTGTACTG
ACCTCAATGCGGAAACAGCTGAACAAACCGCTAACACAATCAAATcAAAT
GGCGGTAAAGCATATAGCTATCAGTTAGACGTGACAGATCGTCTGAAAGT
GTACGCACTTGCTGAACAAATCAAACGTGAAGTTGGTGACGTCACCATGT
TGATCAACAATGCAGGTATAGTGACCGGGAAGAAGATTTTGGACGCACCT
GACCAATTGATGGTCAAAACTATGGAAGTGAACACCATCTCACATTTCTG
GACTTTAAAAGCATTCTTGCCATCTATGTTGGAGAAGAATCACGGACACA
TTGTGACAGTTTCATCCATTGCCGGTCATTCGGGAGCTCCTGCCATGGTG
GACTATTGTGCTTCCAAGTTTGGTGCTGTTGGTATTCACGAATCGTTGAC
TGTCGAGTTGATCGGTATTCCTGACAATAAGATCCAAACTTCTTGTGTTT
GTCCTTTCTTCATCAAGACTGGCATGTTCGATGGTGTGTCTAGTGGtTCT
CCCATCTTGTTGCCACTGTTGGAGGTGGATTTCACAGTGGAGAGCATAGT
GTGTGGTGTTTTGAATGACGAAGAAACCATCTACGTTCCAAGAATGCTTC
TACCTCTCATGATCCTCAAAAAttTGGCACCGAGCGCATTGATGAAGCCA
TTGTCTGATTATTTGAAGCTGCACACACAGATGAACGATTTTAAGGGACG
AAAAGAAGGCAAGAAGGCGAAGTAAATGGTGTCAGCAGGTGAACTCTTCC
AGAAAGCATGCAACCTTAtctatttgctttttcaaatgGCAATCATTTGG
CCGTGGAGTATGATCAAGTATTTCTTgcctaaaaataagaaagacATCTC
AGGGGAGATTCTATTTATGTCGGGTGCAGGAAGCGGTATCGGTCGTCTTA
TGTCCATCAAGTTTGCTGAATTGGGTGCAATCGTCATTTGTACTGACCTC
AATGCGGAAACAGCTGAACAAACCGCTAACACAATCAAATcAAATGGCGG
TAAAGCATATAGCTATCAGTTAGACGTGACAGATCGTCTGAAAGTGTACG
CACTTGCTGAACAAATCAAACGTGAAGTTGGTGACGTCACCATGTTGATC
AACAATGCAGGTATAGTGACCGGGAAGAAGATTTTGGACGCACCTGACCA
ATTGATGGTCAAAACTATGGAAGTGAACACCATCTCACATTTCTGGACTT
TAAAAGCATTCTTGCCATCTATGTTGGAGAAGAATCACGGACACATTGTG
ACAGTTTCATCCATTGCCGGTCATTCGGGAGCTCCTGCCATGGTGGACTA
TTGTGCTTCCAAGTTTGGTGCTGTTGGTATTCACGAATCGTTGACTGTCG
AGTTGATCGGTATTCCTGACAATAAGATCCAAACTTCTTGTGTTTGTCCT
TTCTTCATCAAGACTGGCATGTTCGATGGTGTGTCTAGTGGtTCTCCCAT
CTTGTTGCCACTGTTGGAGGTGGATTTCACAGTGGAGAGCATAGTGTGTG
GTGTTTTGAATGACGAAGAAACCATCTACGTTCCAAGAATGCTTCTACCT
CTCATGATCCTCAAAAAttTGGCACCGAGCGCATTGATGAAGCCATTGTC
TGATTATTTGAAGCTGCACACACAGATGAACGATTTTAAGGGACGAAAAG
AAGGCAAGAAGGCGAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002756XLOC_002756Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004865-proteinTCONS_00004865-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004865-exon-sc0000049-1491911889:464751..464877TCONS_00004865-exon-sc0000049-1491911889:464751..464877Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1510915933:464751..464877TCONS_00004865-exon-sc0000049-1510915933:464751..464877Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1575043694:464751..464877TCONS_00004865-exon-sc0000049-1575043694:464751..464877Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1491911889:481591..481751TCONS_00004865-exon-sc0000049-1491911889:481591..481751Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1510915933:481591..481751TCONS_00004865-exon-sc0000049-1510915933:481591..481751Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1575043694:481591..481751TCONS_00004865-exon-sc0000049-1575043694:481591..481751Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1491911889:481955..482087TCONS_00004865-exon-sc0000049-1491911889:481955..482087Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1510915933:481955..482087TCONS_00004865-exon-sc0000049-1510915933:481955..482087Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1575043694:481955..482087TCONS_00004865-exon-sc0000049-1575043694:481955..482087Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1491911889:482243..482448TCONS_00004865-exon-sc0000049-1491911889:482243..482448Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1510915933:482243..482448TCONS_00004865-exon-sc0000049-1510915933:482243..482448Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1575043694:482243..482448TCONS_00004865-exon-sc0000049-1575043694:482243..482448Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1491911889:482569..482813TCONS_00004865-exon-sc0000049-1491911889:482569..482813Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1510915933:482569..482813TCONS_00004865-exon-sc0000049-1510915933:482569..482813Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1575043694:482569..482813TCONS_00004865-exon-sc0000049-1575043694:482569..482813Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1491911889:483050..483175TCONS_00004865-exon-sc0000049-1491911889:483050..483175Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1510915933:483050..483175TCONS_00004865-exon-sc0000049-1510915933:483050..483175Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1575043694:483050..483175TCONS_00004865-exon-sc0000049-1575043694:483050..483175Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1491911889:484488..485082TCONS_00004865-exon-sc0000049-1491911889:484488..485082Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1510915933:484488..485082TCONS_00004865-exon-sc0000049-1510915933:484488..485082Clytia hemisphaericaexon
TCONS_00004865-exon-sc0000049-1575043694:484488..485082TCONS_00004865-exon-sc0000049-1575043694:484488..485082Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:464751..485082 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.8739	61.7843	78.0849	91.7605	30.0275	26.0296	46.3483	50.7934	57.1481	77.7166	86.0236	39.5778	50.0358	45.1956	63.904	87.0036	67.0944	57.1264	26.8951	45.5301	41.915	50.9046	44.8536	45.0267	48.9501	54.0926	148.945	139.869	153.819	110.761
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
Blast
[Close]
BLAST of TCONS_00004865 vs. Swiss-Prot (Human)
Match: RDHE2 (Epidermal retinol dehydrogenase 2 OS=Homo sapiens GN=SDR16C5 PE=2 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.637e-87
Identity = 131/283 (46.29%), Postives = 195/283 (68.90%), Query Frame = 1 
Query:  238 SMIKYFLPKNKKDISGEILFMSGAGSGIGRLMSIKFAELGAIVICTDLNAETAEQTANTIKSNGG-KAYSYQLDVTDRLKVYALAEQIKREVGDVTMLINNAGIVTGKKILDAPDQLMVKTMEVNTISHFWTLKAFLPSMLEKNHGHIVTVSSIAGHSGAPAMVDYCASKFGAVGIHESLTVELIGIPDNKIQTSCVCPFFIKTGMFDGVSSGSPILLPLLEVDFTVESIVCGVLNDEETIYVPRMLLPLMILKNLAPSALMKPLSDYLKLHTQMNDFKGRKE 1083
            +MI   LPK +K+++GEI+ ++GAGSG+GRL++++FA LG++++  D+N E  E+T    +  G  + ++Y  D + +  VY +A+Q+K+EVGDV++LINNAGIVTGKK LD PD+LM K+ +VN  +H WT KAFLP+M+  +HGH+V +SS AG SG   + DYCASKF A G  ES+ VE        I+T+ VCPFFIKTGMF+G ++G P LLP+LE  + VE IV  +L ++  +Y+P++L  +M LK+  P      ++DYL +   M+ F  +K+
Sbjct:   25 AMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQFARLGSVLVLWDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVYRVADQVKKEVGDVSILINNAGIVTGKKFLDCPDELMEKSFDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSAGLSGVNGLADYCASKFAAFGFAESVFVETFVQKQKGIKTTIVCPFFIKTGMFEGCTTGCPSLLPILEPKYAVEKIVEAILQEKMYLYMPKLLYFMMFLKSFLPLKTGLLIADYLGILHAMDGFVDQKK 307
The following BLAST results are available for this feature:
BLAST of TCONS_00004865 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RDHE21.637e-8746.29Epidermal retinol dehydrogenase 2 OS=Homo sapiens ... [more]
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