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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049833 ID=TCONS_00049833|Name=TCONS_00049833|organism=Clytia hemisphaerica|type=transcript|length=1289bp
ATATAAATAAGtcgaatttttcataaatcGAATACCTActataaaaatat
aatgtaAATAACTCGAGAACTTTGAGGCACGAAAAAAAACCAagttaaaa
tttatcaaataactcgaaaagttaaaagcacgaaaaaaaacccgagttaa
aaatgatgacgtcataatgacatcacaaaactgaaattatgacgtcatat
gcaaaataactcgggaaaatAGCTCGGGAATTCCAGGCCCCTTCTAGTGA
TGCTCTTTATTGAAATTTATTGTAATTTGTTTGGTCAAAATTTAGCCTCA
TGTTATACGTGTGCCTCTTTCCGCTAGTGTAAAACAGGGGTGTAtaacat
agatttataaagcccgaagggctagatgtcgggcTTTAAACCATGCATCG
CAGGAAAAAAAGTGAAtgtcggaaaaaatattgttgctattgttttcgaa
aacccgcgaaatcgctgaaattttattgcaatgtcacgtgacttaggtag
gatttcctacctaaccacggcacactttttagTAAAAGtactccatctag
cccttcgggctttataaatctatggtgtataaatcgaacaaatttgctTT
CCCTTCGATTTTACGAGCTATAAAGAAAAGACTAGCATTCAATTAGAACT
TATCTCAGCCAGCACGTCCCAGTCTAAATTTGTATACTACATTGGTCTAA
CTACTGAAGACAATTTTAGTAACGAGACCTTTTAGTTTTTGTTcctttcg
aaaattttcgaaagattttagaTGTTATAGGCATTGTTAGTATATCAAAG
ATTTAGCCAAGATGATCTACAGGATATTCATTTACAAAGAGCTTATAGAT
AACCGTTTTGTTGTCATTTGTGATCTTATTCATAGATTAGGGTAGtttta
tattaaattttcagtttgtgaACATTTTTTGTAATAGGTATACGTAGTCg
aacaatagaatttgaaatttccttaaaaattattgtatttattttgtatg
ttatttttattttagtagtTATTATATTTTTTCCAATTATATCTTCAACT
TGAATTTCACGTTTGTTGAATCTATGTATCATTCCTGAGAAAATAAAAGA
GATTGAAAGTTCTACAGaatattttggatttttcttATGCTGGAATCATT
ATATTCTCAGCGTCGTTAAATGAGAAATAAAGTAAATTAGTGTTAAAAAT
GTTAGctagaaaatatttacaaatagATTAGACGACAATCGCATAATTAC
AAATTACAGAAAAAAGTTTGTTGTCAAGATACATGAAGA Run BLAST on NCBI transcript from alignment at scaffold_166:130411..131699 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049833 ID=TCONS_00049833|Name=TCONS_00049833|organism=Clytia hemisphaerica|type=transcript|length=1289bp|location=Sequence derived from alignment at scaffold_166:130411..131699 (Clytia hemisphaerica)
TCTTCATGTATCTTGACAACAAACTTTTTTCTGTAATTTGTAATTATGCG
ATTGTCGTCTAATctatttgtaaatattttctagCTAACATTTTTAACAC
TAATTTACTTTATTTCTCATTTAACGACGCTGAGAATATAATGATTCCAG
CATaagaaaaatccaaaatattCTGTAGAACTTTCAATCTCTTTTATTTT
CTCAGGAATGATACATAGATTCAACAAACGTGAAATTCAAGTTGAAGATA
TAATTGGAAAAAATATAATAactactaaaataaaaataacatacaaaata
aatacaataatttttaaggaaatttcaaattctattgttcGACTACGTAT
ACCTATTACAAAAAATGTtcacaaactgaaaatttaatataaaaCTACCC
TAATCTATGAATAAGATCACAAATGACAACAAAACGGTTATCTATAAGCT
CTTTGTAAATGAATATCCTGTAGATCATCTTGGCTAAATCTTTGATATAC
TAACAATGCCTATAACAtctaaaatctttcgaaaattttcgaaaggAACA
AAAACTAAAAGGTCTCGTTACTAAAATTGTCTTCAGTAGTTAGACCAATG
TAGTATACAAATTTAGACTGGGACGTGCTGGCTGAGATAAGTTCTAATTG
AATGCTAGTCTTTTCTTTATAGCTCGTAAAATCGAAGGGAAagcaaattt
gttcgatttatacaccatagatttataaagcccgaagggctagatggagt
aCTTTTActaaaaagtgtgccgtggttaggtaggaaatcctacctaagtc
acgtgacattgcaataaaatttcagcgatttcgcgggttttcgaaaacaa
tagcaacaatattttttccgacaTTCACTTTTTTTCCTGCGATGCATGGT
TTAAAgcccgacatctagcccttcgggctttataaatctatgttaTACAC
CCCTGTTTTACACTAGCGGAAAGAGGCACACGTATAACATGAGGCTAAAT
TTTGACCAAACAAATTACAATAAATTTCAATAAAGAGCATCACTAGAAGG
GGCCTGGAATTCCCGAGCTattttcccgagttattttgcatatgacgtca
taatttcagttttgtgatgtcattatgacgtcatcatttttaactcgggt
tttttttcgtgcttttaacttttcgagttatttgataaattttaactTGG
TTTTTTTTCGTGCCTCAAAGTTCTCGAGTTATTtacattatatttttata
gTAGGTATTCgatttatgaaaaattcgaCTTATTTATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049833-exon-scaffold_166-1491911889:130411..131699 | TCONS_00049833-exon-scaffold_166-1491911889:130411..131699 | Clytia hemisphaerica | exon |
| TCONS_00049833-exon-scaffold_166-1510915933:130411..131699 | TCONS_00049833-exon-scaffold_166-1510915933:130411..131699 | Clytia hemisphaerica | exon |
| TCONS_00049833-exon-scaffold_166-1575043694:130411..131699 | TCONS_00049833-exon-scaffold_166-1575043694:130411..131699 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_166 | supercontig | scaffold_166:130411..131699 . |
Blast
The following BLAST results are available for this feature:
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