TCONS_00049756 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00049756
Unique Name	TCONS_00049756
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2365

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_166:211600..220516+

transcript sequence

>TCONS_00049756 ID=TCONS_00049756|Name=TCONS_00049756|organism=Clytia hemisphaerica|type=transcript|length=2365bp
TCTTGTCCTGGCCATAGAGCACTTTACTTGGCTGCACTAAACTGAACTTG
AACTGAATTTGACTTTGATCCTTTTtctctgtttttcttttttttgcaga
gAGAAAAGTACAAAGTAAAAAACATAAGATAATAGCCAAGAAGTATGAAT
TATGATTACGAGTTTGAATTGGATCCAAGGTCATTGGGTGGAAAACCTGG
TTCTGTTTCACTGAAGAAAGATAAACAGAACCTCATTGGTATCAGCATCG
GAGGTGGTGCTCCCTTATGTCCATGTCTTTACGTAGTCCAAGTTTTTGAC
AACACACCAGCTGCCAAAGATGGCACACTTCAAGCTGGAGATGAGATTGT
TGGTGTCAACGGCAAATCCATGAAAGGAAAGACCAAAGTGGATGTCGCTA
GAGCTATTCAATCACAGAAGGAGATTGTGACCATTCAATATGTCAAACTT
CACGCTGATCCAAAGGAAGGCAAATCACTTGACATTATCTTAAAGAAAGT
CAAGCACAAGATGGTAGAGAATATCAGCTCTGGCACTGCTGATGCCCTTG
GATTGAGTCGAGCTATTCTTTGCAATGATGGATTGGTGAAAAAGCTAGAA
GAGTTAGAGCAGAACTCGTTCATTTACAAAGgtattgtggAACACAGCAA
ACGTCTGTTACAAAGCTACTTTCAAATGTCGAATCTTCATAAAGaATTGG
GAGACATCTTTGCTTCAATTGGTGTCCGTGAGCTACAACCCAATGCTAGT
GAAGGGTTTGCTATCTTTGCAGAATGCCATCGgggcTTCAACAAATCTGG
TTTTGATTTCTTGAAGAAAATGAAACCAATGCTGAGCGATCTTAATACTT
ATCTGACCAAGgcCATTCCAGATACAAAGTTGACCATCCAGAAATATTTA
GATGCTAAATTTGAGTATTTGtCTTATTGTTTGAAAGTGAAAGAAATGGA
CGATGAAGAATATGGTTATGCTGCACTTCACGAATCGCTGTACAGAGTTG
AAACTGGTAACTATGACTACAGAGTTGTGTTACGATGCAGGCAATTAGCA
AGAGAACGTTTTGCAAAGCTGCGTTCTGATGTTTTGGTCAAGTTGGAACT
TCTTGATAACAAGCATGTGCAAGATTTGGTATTCCAATTACAAAAGATGC
TTGAAGCCATGACAACGTACCACAATGAATGTGAAGATGAATTATCCAAA
GCTACCATCTTTCCAATTGAAGTGGATCTGTGTGGCGGTGCCATGGCTAG
AGATGATTAAGACTTCTTCCTTTACTATTTTTTTACGAATTGAGCTTTCA
TGGTCATTATGAATCATAGGATTTCTAGACTGATTGGGCTCTAATTATTG
CCTCGTGGACCACCGGAAAAAGAACAACTAATATTGGCGAGAACTATATT
GACGGAATCTACCTTGCCTGAATAAGTTCTTATCCAAATTAAAgttattt
tcatgattttccaaaaatctgcCTAGGACCCTCTATTACagacaaaaaaa
taattgattgtCCCTTCTATTTACCAAAATTAGTTTTCTTCTAAATTAAA
GATTTGCTTCACTTGCTAAAATAAATTCACACAAAATATAAAACACAAGC
AACTGATCAAtattaaaaaaggtttttttagNATCCTTTACCATTTTTTT
ACGAATTGAGCTTTCATGGTCATTATGAATCATAGGATTTCTAGACTGAT
TGGGCTATAATGATTGCCTCGTGGACCACCGGAAAAAGAACAACTAATAT
TGGCGAGAACTATTGGACGGAATCTACCTTGCCTGAATAAGTTCTTATCc
aaattaaagttttttcatgattttccaaaaatctgcCTAGGACCCTCTAT
TACagacaaaaaaataattgattgtCTCTTCTATTTACCAAAAttagttt
tcttcaaaattaaagatttgcTAAAATAAATTCACACAAATAATAAAACA
CAAGCAACTGATGAATATTAGAAAAGGTCTTTTTATAAGTTTTACTACGT
CGTcgaatttgtttgttttacaTAATATAGATAtagaaattatttatttt
tttgaagcatcaattctttatttcataaaattcattcattcatttttggG
GCTAAAAAAGAGAAATCACGAAACAAATTAATTAAGCTGAAGGTTTAAAC
TATAGTTTTCTACTCTTTCCTTTTTTCAATTGCACTTATAAATGAAATGC
TGAAATTGTAAaaacaaattattatttttttgctaCAATTTTGGCaagat
ttaatatttttcatttgttttaaaattgggATATagtattattatttatt
attttttggcaaTTATAGAATTTTATTgtctacatttttttaaaaagaaa
tgtttAGCTTAGATC

Run BLAST on NCBI

transcript from alignment at scaffold_166:211600..220516+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00049756 ID=TCONS_00049756|Name=TCONS_00049756|organism=Clytia hemisphaerica|type=transcript|length=8917bp|location=Sequence derived from alignment at scaffold_166:211600..220516+ (Clytia hemisphaerica)
TCTTGTCCTGGCCATAGAGCACTTTACTTGGCTGCACTAAACTGAACTTG
AACTGAATTTGACTTTGATCCTTTTtctctgtttttcttttttttgcaga
gAGAAAAGTACAAAGTAAAAAACATAAGATAATAGCCAAGAAGTATGAAT
TATGATTACGAGTTTGAATTGGATCCAAGGTATgacctttctttttcttc
tataGTTTCTCCCTTTTGACCATGTGagtggaaaattcttttttcatctA
GAAATTTTCAATCTCCTCAGCACTTTTTGTGATGGGATGAAAAACTGATT
TAAAATCAAACCTTTTATGattcagggctcgaaataacgatatttaggtg
gtcggacacattgtccgatcaaaaattgatttgggtcggacatgtccgat
tgatttttatgtggggTATACTTTAAGTCTAATACaagcttctgatagaa
tttcacattgatcacgaagaagctaaacaaatgcCAATTAATGGTCAGAA
GCCCATGATTTTTACTTGAAGCATNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTGAAGCATGCtttcatttgttgagaaaa
agcatcacacaaaatgaatatctaacactaatgatcgcaactttgagagt
ttttgtgtgtaaataaagaagttactaattctatgtaaattataatttct
tttggaaatatcacaacgcatctgacaaattttttgaaggcaccgaaagt
aattgggtcggacatgatgtccgaatAGAAtctatttgggtcggacattt
cagcaattgggtcggacaatgtccgatgtccgaccgttatttcgagccct
gatGATTTGTAAGACAATAATAGGATAGGAATAAGCTAGGAAAACGCaag
gaaaaagttaaaaaaagccAGGAAAAGACTAGGAAAAAGCTAGATAGGCT
AGGAAGAAGCTAGGAAAACGTAcaggaaaaatttaagaaaaactgagaaa
acactatgaaaaaatataaaacatatttgaaaattggataaaaagctttt
cggcttatgccatcatcagttatcatacaagtaaaaagaaagtaacaaat
ttattgaaaaaattggaaaaaaaaaaaaaaatgtgagtaattaaaagcaa
taaaaatttaagtgacgataaaatatattacagtatAGGGAATTATTAAA
AGCTATAAATATCATTAAGTCTCACGTGACTCCATTTCTGAAAAGCATAA
GGCTACGAGTGTCTATTTGGTTATTCATAATTATTCATAATTCGTCActt
aaatttttattgcttttaattactcacattttttttttttccaatttttt
caataaatttgttactttctttttacttgtatgataactgatgatggcgt
aagccgaaaagctttttatccaattttcaaATATATTTTATATTTCACAA
CTTAACATGGTGAAAATTCATACAACTATGAAAAAACTAGGCAAAAAGGC
TAGGAAAAAGATGGGTCAATAATGGAAAACTTGAATCTTATTTCTTTTTG
TATAATAACAATATTGTAAAATACTACCTTccattcaaaaaaagttttaa
caaTTTTACCAGAATTTCTAACAAATTCCTTATAGTCATGAACTCTTGAA
ATTTGAAAGTACTGAAAGAAAAACAGTTATTAACACCATCGTCAAAGTTT
TTAACTAAAACAACTTTAGCACTATGGCAAGAAAATTTCACACCATTTGA
TAGAATAgaatctgcttttcaaattcaaaaatcctttttctttttcaaac
acATGAATAATATTTACCCTTATCATAGTTACACATTCACATATAAAAGT
AAATCTATTTAATCAGAAGCACAAGTtattatttgagtaagaaattttaa
taaaagccAAAGTTTGAAATATAGAGATTTTATCAACACAAGATCTTTTT
AGTACTGACGTCCATACAATGATGCCAGGCAACTATTGGTTAATAGATCA
GAGGTAGGAGATTTGAAAGTAATAATATTTTACAGATCAAAATCGACATT
GATAATACACACTTATGAGAAATGAGTCTTACTTTTTAGATATCTTTGAT
ATAATCTAACCACAGCATTGAGTTGTTTTTTTCTCATCATAATGCCTAGG
TATGATTTTTATCAGTCTTTATTCATATAATTGTATGCATCTTTTTAGTA
ACAGCTTtcttagttttgaaaaaaatgttggaAGTGAAGTTTAATTGGTA
ATTTGAATCTTaaatttaacttttgttttcaatgaatTTGGATACATACC
CACTCTTTCCCACAGCTCTACTTGAGTTACCAAGAAAGAATACTAGGCCT
AAGAAATTAATGCTTTTTGCCACTAATCAATAACCCACAAAAAGTATTTT
GGTCTGGTTAACGGTTTGATGGTTATAAATgtaaaattgtacaaaattcT
TTTTCACTGTAAAGAGGAAACAGAAACTTTAGAATTTGGTGTGCAATCTT
TTAAATCTGATTAAAAATGGTTAAAGCAGCTATAAGTACTTAGCACTTAG
TTCACATCTAAAATATCAACAATTGTGGTATCAAATTTTGAGTCACTATT
TTCCCATTTCCTCTCCTTTtcgtatgtttttttttttaatcaatttatAC
TGATTATAGCTGAGATCATTAGAAGTCATTAAAAGTGAAATTAATTTGAG
TTTTCTTTAAccattttttgtactttttcaaaagttaatccTGTGTTAGT
TAGAAATTTGCCCTGTAAAAAAAACACACATCACTATAAAAGCGtttatt
tttaagcaaaatgttTCAGAccttattttttagcttttctgtGTCTGTTT
TGAGAAGGAGATAAATaaggtaaaatatttttaaattggtcggaccaaaa
aattttgttttttataactAATGTTTCTACCTCCACATTAGGTCATTGGG
TGGAAAACCTGGTTCTGTTTCACTGAAGAAAGATAAACAGAACCTCATTG
GTATCAGCATCGGAGGTGGTGCTCCCTTATGTCCATGTCTTTACGTAGTC
CAAGTTTTTGACAACACACCAGCTGCCAAAGATGGCACACTTCAAGCTGG
AGATGAGATTGTTGGTGTCAACGGCAAATCCATGAAAGGAAAGACCAAAG
TGGATGTCGCTAGAGCTATTCAATCACAGAAGGTTTTGTTTGATGAGTTT
AGagattttcctttttatttcaCTGTTTAGGtcgtcgttttttttttttt
tttaattttcattgtttctttaGGAGATTGTGACCATTCAATATGTCAAA
CTTCACGCTGATCCAAAGGAAGGCAAATCACTTGACATTAGTAAGTTCTT
ATTAGAATAGAAATGTCAAATCAACGTCTAtgaagagaaaacaaaaaagg
ataCAGTGTTTTACCAGGTTTTCAAAATGCAAGGGATGTTTTTGTGGTCA
AATCTATCTCAAATTTactatttgcaaattttacttgTAGTAGGGGTCCA
AACCTTTTTTGCAAAAGGAGTCCACTGGTAAGGTCTGACAAAATAAGCTG
TAAAGGTAAATCATAGGTAAACACCAGGTACAATTTTTGAAAGGcatatt
caacaaaaaaagtTGGTACCATCGAAAAGAAAATGGAATCTTTTAGCAAA
ACAGTGAACTACAACAAACTTCATACAATCATTAAGTTTTAATTTTGTGT
AGATCGTAATCGTTTGTACCTCTCTTATAGTGATTCTGTTTTgagtttct
tttctttctgtttCTTTGTTTACAGTCTTAAAGAAAGTCAAGCACAAGAT
GGTAGAGAATATCAGCTCTGGCACTGCTGATGCCCTTGGATTGAGTCGAG
CTATTCTTTGCAATGGTTTGTTTTGTGTTATTAATAATCCCCACTGGTTT
TACACAAATACAAAGATACTGAACTATAGATATTCAAGAGAAGTAAGATT
TCCAGAACTTAATGAATAGGAGCTATGCTCAATATCCTACATAAAACCAA
TCTGAAAAATTGTAACATTtgcatgatttcattatttcttattttctttt
ttcaatactCAGATGGATTGGTGAAAAAGCTAGAAGAGTTAGAGCAGAAC
TCGTTCATTTACAAAGGTAAATCTGATAACTTTTAAAGACACCCCCCCTG
GATGCACACAACTACCTACCAATAAGTCAATGACAGGTTTTACAGTTGCT
TTGGTTCTTGCTTCAAATCAATTGGTTTTCATCCATTGGAATTCATCATG
TTTTTACTCAACTCTTcaactttttaggtattgtggAACACAGCAAACGT
CTGTTACAAAGCTACTTTCAAATGTCGAATCTTCATAAAGGTAATGAAAG
TTTTATCAGTGTTCACAGCTCCCAGACGGAAATAGGGTTTTCTGCATTTG
AATtaagtaaaatatttaaaatctcttCTCTGTGTGGTATGAAAAACCTT
GCTTTGTCTCCTGGTTTATGAATCTGAAATGGTTTCTGCAACCGTTTTTT
GTCTCATGATATTTcatttaaactaaaattttttagaatattttcttGCC
CAAGCACACAAAAATGAGTTGCGTAAAAGTGGTTTTGGAACCAGTTTTCA
AAGGATTTAATGACAACAAAATgaactcttttttttcttcatagaATTGG
GAGACATCTTTGCTTCAATTGGTGTCCGTGAGCTACAACCCAATGCTAGT
GAAGGGTTTGCTATCTTTGCAGAATGCCATCGGTAACATTTCATTTTGTT
CTTTAAATTGGTCAAGTATTCTAAACCTGTTCTATCACTGGAAGGATTTT
CCTTAGACTTGCGCTTCTAGATAATATAATCACTTTACAACAGTTTGAAA
CTCCCTCAAACCTATGAAGCTAGACATTTCTCAGATCTTCAAATAGGTTG
GGTACGTTGGTGTGTTATCAAAAGGCAGATTTTTTGCCCACCTTTTAGCT
AAATTTAGAACCATACCCAATGAATTTTGCATTGTTTTGGGAGATTTTGG
TCCATAGCACGATCCAcagtaattttttaaaagtatttacTATTTGTGTT
ACCTTaacggaactaattttcactttgAATCCTGTGAATTACAAAATTGG
CTATCCTCATCCaaggaaaataaggaaaatgaaagaaatgtgtcCAAAAT
AGAGCAAAACTGCATTTGGACTAACAGTATAGTTAACTGCCTGTGAGTTT
TATTAGAGAGGTAAACAATGTGAACAATTTATCTACctattattcaaaaa
acatttcaattgaaatgttttttgaataataattaattttctGACTATTT
TATTACAACAATTTATCTAccattatttcatttttaaggggcTTCAACAA
ATCTGGTTTTGATTTCTTGAAGAAAATGAAACCAATGCTGAGCGATCTTA
ATACTTATCTGACCAAGGTATGTAGATTTTGTTGACAATTTGGAATCTAG
TAGAATCTGTTATATTTGTGATAATACACCAGCTGTctacaaaatttaga
aatgatCCCTTATGGTTAAggtgaaatattattttaatattttgagtttG
TAAGACTTTAAGGGTAACTTGGGAAAACTAGCCCAGGGtatattttgacg
tttttgaaattttaataatgAAGTGAGCTGTCTAAGGAATTCAAAATGAT
CCCTTATTTTTAAgctgaaatattattttatgattttaattttcaggcCA
TTCCAGATACAAAGTTGACCATCCAGAAATATTTAGATGCTAAATTTGAG
TATTTGGTAAAAACAGAATATTCTTATTCGTTATAATATTCACCAAAATC
TTTGAACTACTAAAGGCCAATTATGTTCTTTTCTGAAAGCCTAAAGATTC
ATTTGGTACCAGATTCCCTATTCCTTAATTGAGTTATCGGATTTAACAGT
AGGTCCATTGTGGAAATAAGTTTTAACTTAATTCATTTCAAACTGACTTC
AATTATGGTATTATCCCTCGTCTTTGTGCATATTATTTGgagtatttata
ttttaaaatggGGTTACTTCTCagcaatttctttgttttttttctgtaat
ggatatttttaaacttgatgtttttcttcttcttttcagtCTTATTGTTT
GAAAGTGAAAGAAATGGACGATGAAGAATATGGTTATGCTGTAAGTTTTC
AAATCTCCCTGGTGTGTTCGTGATGAGTGTGTTCGTGATGAGTGTGTTTT
GTATACATTTAAATACCTGTTTTCAATTCTCGTGTGAGCTAGAGATTGGT
TTGGTTTCAAGTTTCAATTCCTGTATTGCTCTTTATTGCTTGCTTTGTTA
TTTATTATCTTAACTTAATCATTGTAATTCTAATTCTAAAATTTTGGTGC
TGTTAGCTTGGAAAGTGATGGGTATCCctttagtttttaaaaatttcaag
tctagTTCAGACTACAGTTAATGCTCTCTTCCCGGCTATATATTAACATT
ATTAACGCCTTCAATAAAGTCGACACAAGATGAGCAGCAACCATAATATT
TGCTATACTTTGTAAactgtttaaaaaaaacatttcatttacTTACAGTC
AGCAATTTTTGATTTCACTTTTGAAAGTCAGCGGTCTATTAAAGTATCCC
AAAGCAAATTTTTTAACTTATTGATTATGTCCCATACCCTATCAAATGGT
CGGTTTGTTTTTGCTGTTTACTAGCCctcaaactcaaaattttcttcatt
ctAACAATCTAGGCACTTCACGAATCGCTGTACAGAGTTGAAACTGGTAA
CTATGACTACAGGTGTGTTAAATAGACTTTGCTTGCAGTTTTATGATATT
CAGAATATGCACTACTACAATGGTTCCTGTTATAGTGTCGTGATTAGTAG
AACACTCTGCTCAGAAAAGTTACATAATTACTTGAAATCATATATCAGGA
TATATCAGTTTTGTAAGAAATAAGTAACTCGTATTAATGAGAAACTTCtc
gattttggattttttgaagAAACATTATCTTGAAATACGtctgtgattgg
ttgaaacCTTATTTTAGCTGAGCTATCCAGTTGTGTATAAGAAAATAAGG
AGAATTCTACCCAATGTCTCATTCTGCGAACCCGTTCAACCTTTTGATCT
TGAGTGCTATGTAAGAATGATATTACCTTTTGGCAAACCTATTCTCATTA
TTCTATCCAAACTATTATTTTAATTGGTTTATCACGTTCTTTGTTAAATT
CAGAGTTGTGTTACGATGCAGGCAATTAGCAAGAGAACGTTTTGCAAAGC
TGCGTTCTGATGTTTTGGTCAAGTTGGAACTTCTTGATAACAAGCATGGT
GAGTgtttaaaagatattttgtttACAAAGCATTTCTCTTTCATTGGTAT
CATCGCTTCTACCCATCACTTTGGAATAAGTATTTAAAGGCATTATTCTC
GTGTTCAAAGACCTTCATATAGATATATTGTTGTTAAGGATACTGTCTAA
TTTATTGactttcctttttttgaagtcgaattcaactaaaaaaatatata
ttgacTAAAATTTAAGGGGGTTTGACCTTCAAAAAACGACCTCCGCCATA
tcacgggggggggggtaatgtGTTTTAGAAACACTCAAATAATTTTGTTT
CCTTTCCTTTATGTTTCAGTGCAAGATTTGGTATTCCAATTACAAAAGAT
GCTTGAAGCCATGACAACGTACCACAATGAATGTGAAGATGAATTATCCA
AAGCTACCATCTTTCCAATTGAAGTGGATCTGTGTGGCGGTGCCATGGCT
AGAGATGATTAAGACTTCTTCCTTTACTATTTTTTTACGAATTGAGCTTT
CATGGTCATTATGAATCATAGGATTTCTAGACTGATTGGGCTCTAATTAT
TGCCTCGTGGACCACCGGAAAAAGAACAACTAATATTGGCGAGAACTATA
TTGACGGAATCTACCTTGCCTGAATAAGTTCTTATCCAAATTAAAgttat
tttcatgattttccaaaaatctgcCTAGGACCCTCTATTACagacaaaaa
aataattgattgtCCCTTCTATTTACCAAAATTAGTTTTCTTCTAAATTA
AAGATTTGCTTCACTTGCTAAAATAAATTCACACAAAATATAAAACACAA
GCAACTGATCAAtattaaaaaaggtttttttagNATCCTTTACCATTTTT
TTACGAATTGAGCTTTCATGGTCATTATGAATCATAGGATTTCTAGACTG
ATTGGGCTATAATGATTGCCTCGTGGACCACCGGAAAAAGAACAACTAAT
ATTGGCGAGAACTATTGGACGGAATCTACCTTGCCTGAATAAGTTCTTAT
CcaaattaaagttttttcatgattttccaaaaatctgcCTAGGACCCTCT
ATTACagacaaaaaaataattgattgtCTCTTCTATTTACCAAAAttagt
tttcttcaaaattaaagatttgcTAAAATAAATTCACACAAATAATAAAA
CACAAGCAACTGATGAATATTAGAAAAGGTCTTTTTATAAGTTTTACTAC
GTCGTcgaatttgtttgttttacaTAATATAGATAtagaaattatttatt
tttttgaagcatcaattctttatttcataaaattcattcattcatttttg
gGGCTAAAAAAGAGAAATCACGAAACAAATTAATTAAGCTGAAGGTTTAA
ACTATAGTTTTCTACTCTTTCCTTTTTTCAATTGCACTTATAAATGAAAT
GCTGAAATTGTAAaaacaaattattatttttttgctaCAATTTTGGCaag
atttaatatttttcatttgttttaaaattgggATATagtattattattta
ttattttttggcaaTTATAGAATTTTATTgtctacatttttttaaaaaga
aatgtttAGCTTAGATC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031551	XLOC_031551	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_166	supercontig	scaffold_166:211600..220516 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.8723	44.273	13.4924	10.2602	36.7243	29.1727	47.1379	51.4439	26.4873	22.0357	23.806	18.1384	15.6375	14.6728	14.2349	18.1136	28.87	27.0811	11.319	13.2906	18.372	19.3025	33.099	31.9438	24.6251	23.4201	32.8241	23.5929	23.0951	23.484

Blast

[Close]

BLAST of TCONS_00049756 vs. Swiss-Prot (Human)
Match: PICK1 (PRKCA-binding protein OS=Homo sapiens GN=PICK1 PE=1 SV=2)

HSP 1 Score: 507.294 bits (1305), Expect = 1.668e-172
Identity = 241/367 (65.67%), Postives = 293/367 (79.84%), Query Frame = 1

Query:  148 NYDYEFELDPRSLGGKPGSVSLKKDKQNLIGISIGGGAPLCPCLYVVQVFDNTPAAKDGTLQAGDEIVGVNGKSMKGKTKVDVARAIQSQKEIVTIQYVKLHADPKEGKSLDIILKKVKHKMVENISSGTADALGLSRAILCNDGLVKKLEELEQNSFIYKGIVEHSKRLLQSYFQMSNLHKELGDIFASIGVRELQPNASEGFAIFAECHRGFNKSGFDFLKKMKPMLSDLNTYLTKAIPDTKLTIQKYLDAKFEYLSYCLKVKEMDDEEYGYAALHESLYRVETGNYDYRVVLRCRQLARERFAKLRSDVLVKLELLDNKHVQDLVFQLQKMLEAMTTYHNECEDELSKATIFPIEVDLCGGAMA 1248
            + DY+ E D   +   PG V+L+KD QNLIGISIGGGA  CPCLY+VQVFDNTPAA DGT+ AGDEI GVNG+S+KGKTKV+VA+ IQ  K  VTI Y KL ADPK+G SLDI+LKKVKH++VEN+SSGTADALGLSRAILCNDGLVK+LEELE+ + +YKG+ EH+K LL++++++S  H+  GD+F+ IGVRE QP ASE F  FA+ HR   K G   LK +KPML+DLNTYL KAIPDT+LTI+KYLD KFEYLSYCLKVKEMDDEEY   AL E LYRV TGNY+YR++LRCRQ AR RF+++R DVL K+ELLD KHVQD+VFQLQ+++  M+ Y+N+C   L  A +FPIEVDL    +A
Sbjct:    4 DLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTTLA 370

The following BLAST results are available for this feature:

BLAST of TCONS_00049756 vs. Swiss-Prot (Human)

BLAST of TCONS_00049756 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PICK1	1.668e-172	65.67	PRKCA-binding protein OS=Homo sapiens GN=PICK1 PE=...	[more]

You are here

TCONS_00049756 (transcript) - C. hemisphaerica