TCONS_00049760 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049760
Unique NameTCONS_00049760
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length572

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049760 ID=TCONS_00049760|Name=TCONS_00049760|organism=Clytia hemisphaerica|type=transcript|length=572bp
aaaataacaaagtgttataaaaatcatacaaaatgaCACTTCTGAAGAAA
TATTTAAATCGAAATCCTTATTCCACCGAAGTTGCAGTGGTTATGGAAAG
TCTAGAAGcATCTACATCCACTTTGAATGAGAATCAAGAAAACGAACTCA
CTGATGACAGTCAAGTTTTACCAGGGTTTTGCCAATCGTTGGAATCTGTA
CTTCGACAAGGACTCAAAGTTGGAAGTCTTGGTCTGATTGGTCTGTTGGA
TCGTGATTATTGGAGTGTCATCGATGGCTTATCGTCATCTTCAAGAGTAA
CTCTAAGACCTCCACCTTCAATCAACCATGCGATCACCGTTGTCAAAGGA
TGCAAAAAGACGAGTACATCACAAGGGCGTGGTCGCCTTTTTATTCGCGT
TGCATTAACGAAAGGCATTCTGGTGCAAGCATTGGAAGCACTGCTGCAAA
ATCAAGAATATGTTAGGTATTGGTATAAAGATGCTTCACCATTGGTCGAT
TACCGTAGAAAAGACTTGGTTATGGGTATATTAAAATCGTTGAAAAAGAG
GAAGTACAACCTAGATGTCAAT
Run BLAST on NCBI

protein sequence of TCONS_00049760-protein

>TCONS_00049760-protein ID=TCONS_00049760-protein|Name=TCONS_00049760-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
MTLLKKYLNRNPYSTEVAVVMESLEASTSTLNENQENELTDDSQVLPGFC
QSLESVLRQGLKVGSLGLIGLLDRDYWSVIDGLSSSSRVTLRPPPSINHA
ITVVKGCKKTSTSQGRGRLFIRVALTKGILVQALEALLQNQEYVRYWYKD
ASPLVDYRRKDLVMGILKSLKKRKYNLDVN
Run BLAST on NCBI

transcript from alignment at scaffold_166:232429..239382+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049760 ID=TCONS_00049760|Name=TCONS_00049760|organism=Clytia hemisphaerica|type=transcript|length=6954bp|location=Sequence derived from alignment at scaffold_166:232429..239382+ (Clytia hemisphaerica)
aaaataacaaagtgttataaaaatcatacaaaatgaCACTTCTGAAGAAA
TATTTAAATCGAAATCCTTATTCCACCGAAGTTGCAGTGGTTATGGAAAG
TCTAGAAGGTTGGTTGCATTTTATACGAAAAAATGTCGTTTACATAGATG
CGTGCGGTCGGGTAGCTCGGTCGGTAAACCATTTGCCTTCCAATCCAagg
attgtgggttcgatccccggtatGTGCCACAAACTCAGCGAATGATatct
tagattgggtaatctaatctaagaccatgttcagacgttatgGTTTCGTA
TTGCCACTGGTATGGTATGTGTTACGGATAGGAAGTGTTCATACtcattt
cggaacgtttcggagcaagaaaacggagcagttccgttccgatgaaaata
gtggaacGAAACCATGAATTGAATTCAGACTTTGATCTTATTGGTGTTCT
AGAAATTGGTTCGCctaaaattgatgatgattgtctttaattttcataaa
ttgACTTTAATCTTATTATTAAGTAGATTGGCTAGAGATTTTGTCAATTC
TCAGGCTAATTCTTATACTGCTCAAATAATgatataaaaaaatctctttc
acttttcaatgttttctttctGACAAATCTACATGCCTTTAGTATGCGTG
ACATTTGACTTCATGTATATAACCACACAAAAGTCATCTGATTGATGAAT
TCATGCCATCAAGCTAGTAACACGGGCGCTCTCAAAGGGGATAAGGTCTT
TTTTAGTAGGCAATTTCATGGTCGAAATAAATCATGGGTTTTAAGTACTG
ACTGCAGCATAATTGCGGCTTCCTGTTGGTCAGACGcaaaaacatccaaa
gttttaGACCAACAGAAAGTCGTTATCGAAACGCAATGGTCATGATTACT
CGTGATTcctttcgactgtgaaatgacaCATGTCTCTGAGTGTGTCAATG
CGAAACTTTTATACATTTAAAGTCACCATTGGAAAAGTCACTCTAAACTG
GAACCctcaatttatttttatttttcttcgcagcATCTACATCCACTTTG
AATGAGAATCAAGAAAACGAACTCACTGATGACAGTCAAGTTTTACCAGG
GTTTTGCCAATCGTTGGAATCTGTACTTCGACAAGGACTCAAAGGTAAAG
AAAATGCTGGCACCCAACGTTCTTTTAACATACCGAACTTTTTTAATAGC
ATTTGAGGGAACTTTCTTTCCTTCTCTTTCTTTATAGTTGGAAGTCTTGA
ACTGTTTCTCCATTTCTGTCTCCCGCTAATCCTAGTTCCCCACTGTATAG
TAATGTGGTGTTCGTCTCCTAGGACCCTGGATGGGAGGGCATCACATCAT
TACACTATtaaaggaaacaaaaatctgtctcaaaataatataCAGGAGGA
CACAAAAAAGCTGTAACTTATTTGATAGAACCCGAAggagctttattttc
tttcttttttggacCAGCATCTGGCCTTTCATTAGCCGCTGCCCGTGGTG
CTGTATATCCGTTTTTGAAGAAGCAGcgctttgccaattcaagttcattt
tgaaagaaacgGCGCCTTATAACAATCAATTTTCCTTCATGCTGCGCTTC
ggctttttgttttttggacctacctccgggtgccccggtggaggtcctat
gaattaacctctgtctgttcgttcgttcgttcgttttatctggtactcga
tgtagaaattttcttccgacacgctaaagctctgaaggtcgggaaaatta
taaacatctggaacctttggtTTACGGAATTTCTCCTGACCGCGTtcgta
aaatttagaaagaGTCTGGGGACGGTAAAAAGTTACTAGTGCCCCGAACT
AAGAGTAcacacgcaaaaaaaatttcccgtgCGATTTCTAAATAGTGCTC
CGaactgaaaaatgtaaacaaagcaggACGGGAACTAAAATATTATTGAG
AGTGGCTCTAAATCCAAACCCAATTACAGTTCAATTTATAGCAATAAAAT
GCGAATTCTTTGCTGCTACTGGAATAAATAAGTTTGTCTCCTCACATCGA
ATGACAATTTCACCTATTCAAGATCTTTTACTGcctaaaaaaagtaaaca
agcaaTGTCACGAACCAAACAATTAGAAGAGAGTGGCCATGAGCCAAATT
TCCCTCAATCTAGTCCAATTTATACAGCAATATGTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCACTAGATCTTTCACTACC
TGAAATATGCATGTCAGCCTCTAAAAATAGAGTTTGGCGAAACAAGCAAA
GATGGTGTCCtattaccaaaaaataaaagctttttcCCCAAGATACTGAT
ACAATATATGGGAACCTCCCTCCAACTTTGTTATTGGTGAAGGAGGATTC
TGGCTTTTCCAAATAAACAACACACAGGTCATGATCAACAAGTTTGTTGA
TGTCGGTTGGGGTTGGGCGGTCCGCTGCTCTGCATGGACAGATGGAGGGC
GGTCGACAGGCTCTAAAGGTCTAAATTGGAATGCAGCAGTTTAAAATTCC
AGCATAAAAATTATTGGTAAAACTAAACAAAACATACCTGATATNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNgttcgttcgttcgttcgttcgttcgtccgtccgtccgtccg
ttcgtctgttaccagcttttctcgagattggctcattagctttttctgat
tttttgcacaaagatccaaaatggcaatggccaaaatgtgacggagcctg
attttcgaaaaaaaatcatttccggccgaaaatgccggaaatatgccgga
aaaaccggttttttgacattttctcgaatttttatttttagttttttctg
attttttgcagaaagatgcgtattcgcaatgctcaaaacatggccgagtt
cgaattttgagaaaaaattttttccggttgaaaattccggaaatcgccgt
ttttgcagattttcattggatttttttctcatatttctatgtttttcaca
caaaaacattattgataacaatgctcaccatcaagcatgattcaattgtc
aataaaactgattttgcgaccagaactttctNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNtttccctacaacccttccctctccccctaccatcaat
caatgatgaatttcttgcgttatgcattttcgctaaacgctatgttttct
gactgatttttttaaatttttctccttgcattgctatctaactttcatca
tcaggtaggtccattcagcatctagcttgttataGTTGTTTTAGTATCAT
TACGTACATTGAACGAATGGGGTGGTCGTTTGTTATAGTATAATTTGAAA
TTGTCATTCATTtcttttgacaacttttttttgttttagaatttaaaatt
ttgacactTAGTCCTTTATTATGGGAACCTAAAATCTGTCTCAAAATTAT
ctacagaaaaaacaaaaaggacATTTTTAGTTTAATAGCATTCGAAGGAA
CCTTTTTTTTCCCTCTTTTCTTTATAGTTGGAAGTCTTGGTCTGATTGGT
CTGTTGGATCGTGATTATTGGAGTGTCATCGATGGCTTATCGTCATCTTC
AAGAGTAACTCTAAGGTAATGAATAATTTTGTTAGACTCCATGCTTTTTC
AGTGATGACAACTCATTGCTGTTTTCAGTCTTAaatttttccgtctcaga
cggatttccgttccagtaaaatatataaagatgctcttccgtctcaaaat
tctgcataattcaccaaagTTTCAAGAATCCAAGAGTTTGTGAGATTAAC
TTTCCGTCTAAGACAAAGGCTTGCTTAGACTCTATGCTTGCATTTTCAGA
TAATGTTTCTTAGCCAACTCGCTACTGTTTTACTTCTACTTCTTGAAAAA
TAGATCTATAAAAAAACTAAGATTTTCACCAAAGAAGCTCGACCACTCAC
ctttgggtcaatttttttccgCACAACCACTATGCTACTGTTTTTTATCC
CTTCAaactgttgtttttttattgtgtAGACCTCCACCTTCAATCAACCA
TGCGATCACCGTTGTCAAAGGATGCAAAAAGGTCAGCGTTGCAAATTTTT
TAAGACTACTACATGAAAAGATGAGCAGATCACCCGGTTGGGAAAAGAGC
ATTTCACACCTTGGAACTTTTCCTACCGGAAtgatttactcaatttttcc
tGTTTATTTCGTGACAAGGTGGCTTAAAAAGTTTACCTTTGCTGAAATAA
GAATTAAATCATTCTTAATTTCTGCGAGAAATCttcaatctgattggtta
aaaagagtacaatatatcttgtattttacatgtatcgtagttaaagtaat
gaaaattattttttcaaaattttacatgtaaaaatataaattgacgaaaa
gatgttgttgcattgtagcggtagaagcaatctaacgtcactttgctaca
aaagtgtcctccaacacaaaaagtNNATTGTTTTCCGCTCGACAAGGAAA
AAAAGCTATGTACCaataaagaaatatcttttcttGCAGACGAGTACATC
ACAAGGGCGTGGTCGCCTTTTTATTCGCGTTGCATTAACGAAAGGCATTC
TGGTGCAAGCATTGGAAGCACTGCTGCAAAATCAAGAATATGTTAGGGTA
TGTTTCCTCAGGGAGAAAATTCGTCCAACAATCTTTTTTAAGATCAGTTC
GACTAAACTGGGAAAATTGTTAAAATCTTCAATAACATTTGTGGGGGCGG
TGACTCTCCCCAGTTGGCACAATCTAACGTTCTAATCCCCAATCTAACGT
TCAcgacatccatataacgttatatgaacgttgaaacaacgttgtgtgcc
agctgggtcagCACACAATTGACTCTATCTTATGCGGTCTTTCGTgggac
caatttttttttcgaattagagaaagatttgagtcatagaggttcgaatt
agagagagttgactgtaggTTGTTTAATAGATATTTTACATATTGTAAGT
TGTTTTTTAGGTAATTGTTTTGCTAAATAAATAGTTTTTCAACGTTGGCC
GTCCTATTTTTCACCAGCTTTATCGGGAAAATAAAATTAAGTGAAGAAAT
ATTAGAGAAAGGAATAGATTTTTATGCTGAAAATCCGTCGATGATTTAGC
ATCGTGGTGAATTAGAGGAGGAACTTTAGTCGCTTCCTTTGTAAAACTTT
TAATCTCAATTCGCAAAAGCAAGAGTGCTTAACCACACAGAGTTGATTAC
TGCAGCaacatagaaaaatatcatgtagccaaaacacgaatcctatgaaa
taggttAATAAATACGGTATCTATCTTAATTATTTTATAGTATTGGTATA
AAGATGCTTCACCATTGGTCGATTACCGTAGAAAAGGTAGGTGCGATATT
ATCTCCTTTGGGTTATATCAAGCCAGCACAAGACTTTTTTACGGAGAAAC
GTTTATTCCACTCACTGAACTTCTTATAAACCATCTTAGAGAGAGAAGAT
TACCCAAACTATCTTACTGATTCGTTAAGGTGGTGGTGACCGGAGATTGA
ACACAGTAATACTCTATCTAATTACTGAGATACCCACTCATGTTCTAATT
GACATGCCACCAAAAGTATTCCCCTGGAATTCCAGTCACTTTTTGGCTCA
AACCTCTTGAGTTTTAACATCTATTGCATTCTGGTTATGCCCTTTGTAAT
GATAGAAATGTTCCCTTTTCGCTGTGACGGTGTTGGAGTGTTTTTCCGCA
GATGCTTAAGGGCTATTTAGACTaaacaatatattgacgaacaatattcg
acaatatggtttgcggaccgtaatgtacgaagtaaacaactggtacttta
ttataaaaaggaattttctttctgtaaacaatccccctttattgttggaa
aattgcaaatcgagctgacaatatattgcggacaccttttcaatatattg
tcgacattcagcaataCATCATCAATATANtattgcaaatcgagctgaca
atattgccgacattcagcaatatatcatcaatatattgtctgacaatata
ttgtgtagtgtatgtagccctttattctttattttgatctttcagACTTG
GTTATGGGTATATTAAAATCGTTGAAAAAGAGGAAGTACAACCTAGATGT
CAAT

Coding sequence (CDS) from alignment at scaffold_166:232429..239382+

>TCONS_00049760 ID=TCONS_00049760|Name=TCONS_00049760|organism=Clytia hemisphaerica|type=CDS|length=3780bp|location=Sequence derived from alignment at scaffold_166:232429..239382+ (Clytia hemisphaerica)
atgaCACTTCTGAAGAAATATTTAAATCGAAATCCTTATTCCACCGAAGT
TGCAGTGGTTATGGAAAGTCTAGAAGcATCTACATCCACTTTGAATGAGA
ATCAAGAAAACGAACTCACTGATGACAGTCAAGTTTTACCAGGGTTTTGC
CAATCGTTGGAATCTGTACTTCGACAAGGACTCAAAGTTGGAAGTCTTGG
TCTGATTGGTCTGTTGGATCGTGATTATTGGAGTGTCATCGATGGCTTAT
CGTCATCTTCAAGAGTAACTCTAAGACCTCCACCTTCAATCAACCATGCG
ATCACCGTTGTCAAAGGATGCAAAAAGACGAGTACATCACAAGGGCGTGG
TCGCCTTTTTATTCGCGTTGCATTAACGAAAGGCATTCTGGTGCAAGCAT
TGGAAGCACTGCTGCAAAATCAAGAATATGTTAGGTATTGGTATAAAGAT
GCTTCACCATTGGTCGATTACCGTAGAAAAGACTTGGTTATGGGTATATT
AAAATCGTTGAAAAAGAGGAAGTACAACCTAGATGTCAATatgaCACTTC
TGAAGAAATATTTAAATCGAAATCCTTATTCCACCGAAGTTGCAGTGGTT
ATGGAAAGTCTAGAAGcATCTACATCCACTTTGAATGAGAATCAAGAAAA
CGAACTCACTGATGACAGTCAAGTTTTACCAGGGTTTTGCCAATCGTTGG
AATCTGTACTTCGACAAGGACTCAAAGTTGGAAGTCTTGGTCTGATTGGT
CTGTTGGATCGTGATTATTGGAGTGTCATCGATGGCTTATCGTCATCTTC
AAGAGTAACTCTAAGACCTCCACCTTCAATCAACCATGCGATCACCGTTG
TCAAAGGATGCAAAAAGACGAGTACATCACAAGGGCGTGGTCGCCTTTTT
ATTCGCGTTGCATTAACGAAAGGCATTCTGGTGCAAGCATTGGAAGCACT
GCTGCAAAATCAAGAATATGTTAGGTATTGGTATAAAGATGCTTCACCAT
TGGTCGATTACCGTAGAAAAGACTTGGTTATGGGTATATTAAAATCGTTG
AAAAAGAGGAAGTACAACCTAGATGTCAATatgaCACTTCTGAAGAAATA
TTTAAATCGAAATCCTTATTCCACCGAAGTTGCAGTGGTTATGGAAAGTC
TAGAAGcATCTACATCCACTTTGAATGAGAATCAAGAAAACGAACTCACT
GATGACAGTCAAGTTTTACCAGGGTTTTGCCAATCGTTGGAATCTGTACT
TCGACAAGGACTCAAAGTTGGAAGTCTTGGTCTGATTGGTCTGTTGGATC
GTGATTATTGGAGTGTCATCGATGGCTTATCGTCATCTTCAAGAGTAACT
CTAAGACCTCCACCTTCAATCAACCATGCGATCACCGTTGTCAAAGGATG
CAAAAAGACGAGTACATCACAAGGGCGTGGTCGCCTTTTTATTCGCGTTG
CATTAACGAAAGGCATTCTGGTGCAAGCATTGGAAGCACTGCTGCAAAAT
CAAGAATATGTTAGGTATTGGTATAAAGATGCTTCACCATTGGTCGATTA
CCGTAGAAAAGACTTGGTTATGGGTATATTAAAATCGTTGAAAAAGAGGA
AGTACAACCTAGATGTCAATatgaCACTTCTGAAGAAATATTTAAATCGA
AATCCTTATTCCACCGAAGTTGCAGTGGTTATGGAAAGTCTAGAAGcATC
TACATCCACTTTGAATGAGAATCAAGAAAACGAACTCACTGATGACAGTC
AAGTTTTACCAGGGTTTTGCCAATCGTTGGAATCTGTACTTCGACAAGGA
CTCAAAGTTGGAAGTCTTGGTCTGATTGGTCTGTTGGATCGTGATTATTG
GAGTGTCATCGATGGCTTATCGTCATCTTCAAGAGTAACTCTAAGACCTC
CACCTTCAATCAACCATGCGATCACCGTTGTCAAAGGATGCAAAAAGACG
AGTACATCACAAGGGCGTGGTCGCCTTTTTATTCGCGTTGCATTAACGAA
AGGCATTCTGGTGCAAGCATTGGAAGCACTGCTGCAAAATCAAGAATATG
TTAGGTATTGGTATAAAGATGCTTCACCATTGGTCGATTACCGTAGAAAA
GACTTGGTTATGGGTATATTAAAATCGTTGAAAAAGAGGAAGTACAACCT
AGATGTCAATatgaCACTTCTGAAGAAATATTTAAATCGAAATCCTTATT
CCACCGAAGTTGCAGTGGTTATGGAAAGTCTAGAAGcATCTACATCCACT
TTGAATGAGAATCAAGAAAACGAACTCACTGATGACAGTCAAGTTTTACC
AGGGTTTTGCCAATCGTTGGAATCTGTACTTCGACAAGGACTCAAAGTTG
GAAGTCTTGGTCTGATTGGTCTGTTGGATCGTGATTATTGGAGTGTCATC
GATGGCTTATCGTCATCTTCAAGAGTAACTCTAAGACCTCCACCTTCAAT
CAACCATGCGATCACCGTTGTCAAAGGATGCAAAAAGACGAGTACATCAC
AAGGGCGTGGTCGCCTTTTTATTCGCGTTGCATTAACGAAAGGCATTCTG
GTGCAAGCATTGGAAGCACTGCTGCAAAATCAAGAATATGTTAGGTATTG
GTATAAAGATGCTTCACCATTGGTCGATTACCGTAGAAAAGACTTGGTTA
TGGGTATATTAAAATCGTTGAAAAAGAGGAAGTACAACCTAGATGTCAAT
atgaCACTTCTGAAGAAATATTTAAATCGAAATCCTTATTCCACCGAAGT
TGCAGTGGTTATGGAAAGTCTAGAAGcATCTACATCCACTTTGAATGAGA
ATCAAGAAAACGAACTCACTGATGACAGTCAAGTTTTACCAGGGTTTTGC
CAATCGTTGGAATCTGTACTTCGACAAGGACTCAAAGTTGGAAGTCTTGG
TCTGATTGGTCTGTTGGATCGTGATTATTGGAGTGTCATCGATGGCTTAT
CGTCATCTTCAAGAGTAACTCTAAGACCTCCACCTTCAATCAACCATGCG
ATCACCGTTGTCAAAGGATGCAAAAAGACGAGTACATCACAAGGGCGTGG
TCGCCTTTTTATTCGCGTTGCATTAACGAAAGGCATTCTGGTGCAAGCAT
TGGAAGCACTGCTGCAAAATCAAGAATATGTTAGGTATTGGTATAAAGAT
GCTTCACCATTGGTCGATTACCGTAGAAAAGACTTGGTTATGGGTATATT
AAAATCGTTGAAAAAGAGGAAGTACAACCTAGATGTCAATatgaCACTTC
TGAAGAAATATTTAAATCGAAATCCTTATTCCACCGAAGTTGCAGTGGTT
ATGGAAAGTCTAGAAGcATCTACATCCACTTTGAATGAGAATCAAGAAAA
CGAACTCACTGATGACAGTCAAGTTTTACCAGGGTTTTGCCAATCGTTGG
AATCTGTACTTCGACAAGGACTCAAAGTTGGAAGTCTTGGTCTGATTGGT
CTGTTGGATCGTGATTATTGGAGTGTCATCGATGGCTTATCGTCATCTTC
AAGAGTAACTCTAAGACCTCCACCTTCAATCAACCATGCGATCACCGTTG
TCAAAGGATGCAAAAAGACGAGTACATCACAAGGGCGTGGTCGCCTTTTT
ATTCGCGTTGCATTAACGAAAGGCATTCTGGTGCAAGCATTGGAAGCACT
GCTGCAAAATCAAGAATATGTTAGGTATTGGTATAAAGATGCTTCACCAT
TGGTCGATTACCGTAGAAAAGACTTGGTTATGGGTATATTAAAATCGTTG
AAAAAGAGGAAGTACAACCTAGATGTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031552XLOC_031552Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049760-exon-scaffold_166-1491911889:232429..232536TCONS_00049760-exon-scaffold_166-1491911889:232429..232536Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1510915933:232429..232536TCONS_00049760-exon-scaffold_166-1510915933:232429..232536Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1575043694:232429..232536TCONS_00049760-exon-scaffold_166-1575043694:232429..232536Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1491911889:233462..233572TCONS_00049760-exon-scaffold_166-1491911889:233462..233572Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1510915933:233462..233572TCONS_00049760-exon-scaffold_166-1510915933:233462..233572Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1575043694:233462..233572TCONS_00049760-exon-scaffold_166-1575043694:233462..233572Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1491911889:236756..236843TCONS_00049760-exon-scaffold_166-1491911889:236756..236843Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1510915933:236756..236843TCONS_00049760-exon-scaffold_166-1510915933:236756..236843Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1575043694:236756..236843TCONS_00049760-exon-scaffold_166-1575043694:236756..236843Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1491911889:237258..237309TCONS_00049760-exon-scaffold_166-1491911889:237258..237309Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1510915933:237258..237309TCONS_00049760-exon-scaffold_166-1510915933:237258..237309Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1575043694:237258..237309TCONS_00049760-exon-scaffold_166-1575043694:237258..237309Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1491911889:237768..237875TCONS_00049760-exon-scaffold_166-1491911889:237768..237875Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1510915933:237768..237875TCONS_00049760-exon-scaffold_166-1510915933:237768..237875Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1575043694:237768..237875TCONS_00049760-exon-scaffold_166-1575043694:237768..237875Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1491911889:238569..238614TCONS_00049760-exon-scaffold_166-1491911889:238569..238614Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1510915933:238569..238614TCONS_00049760-exon-scaffold_166-1510915933:238569..238614Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1575043694:238569..238614TCONS_00049760-exon-scaffold_166-1575043694:238569..238614Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1491911889:239324..239382TCONS_00049760-exon-scaffold_166-1491911889:239324..239382Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1510915933:239324..239382TCONS_00049760-exon-scaffold_166-1510915933:239324..239382Clytia hemisphaericaexon
TCONS_00049760-exon-scaffold_166-1575043694:239324..239382TCONS_00049760-exon-scaffold_166-1575043694:239324..239382Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049760-proteinTCONS_00049760-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_166supercontigscaffold_166:232429..239382 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.604578	0	0	4.23359	0.177775	1.73591	1.07987	1.6564	1.82318	1.61499	5.15045	1.95859	1.13045	2.73359	5.11469	3.85213	1.69319	0.844632	2.73649	1.68208	0.59412	1.59153	8.83994	1.38862e-07	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004012Run_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049760 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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