TCONS_00049835 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049835
Unique NameTCONS_00049835
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049835 ID=TCONS_00049835|Name=TCONS_00049835|organism=Clytia hemisphaerica|type=transcript|length=162bp
GCTGTTTTCATCGAATAATTTAACAGTCTTTAAATATCTCATTGTCAAGA
TGTTGAAGCCAATAATCAAAACAATAGGAGTGGCCCCTGAAACAGCTATT
ACAGTAATAATTGCCAACATTGACTTATCAACTCCCGACGTGTTTTCAGT
GCAAACTCCGGC
Run BLAST on NCBI

transcript from alignment at scaffold_166:240382..240543

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049835 ID=TCONS_00049835|Name=TCONS_00049835|organism=Clytia hemisphaerica|type=transcript|length=162bp|location=Sequence derived from alignment at scaffold_166:240382..240543 (Clytia hemisphaerica)
GCCGGAGTTTGCACTGAAAACACGTCGGGAGTTGATAAGTCAATGTTGGC
AATTATTACTGTAATAGCTGTTTCAGGGGCCACTCCTATTGTTTTGATTA
TTGGCTTCAACATCTTGACAATGAGATATTTAAAGACTGTTAAATTATTC
GATGAAAACAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031594XLOC_031594Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049835-exon-scaffold_166-1491911889:240382..240543TCONS_00049835-exon-scaffold_166-1491911889:240382..240543Clytia hemisphaericaexon
TCONS_00049835-exon-scaffold_166-1510915933:240382..240543TCONS_00049835-exon-scaffold_166-1510915933:240382..240543Clytia hemisphaericaexon
TCONS_00049835-exon-scaffold_166-1575043694:240382..240543TCONS_00049835-exon-scaffold_166-1575043694:240382..240543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_166supercontigscaffold_166:240382..240543 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049835 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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