TCONS_00049762 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049762
Unique NameTCONS_00049762
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1600

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049762 ID=TCONS_00049762|Name=TCONS_00049762|organism=Clytia hemisphaerica|type=transcript|length=1600bp
aaattttttagcattttttatacATAGATTTACTACTTGTTactggaaag
tgaaattttgattGGCTTTGGGGTATGAGGTACCTTCTCATTATCTGCac
GGTAGTGCAGTTAATGATAACGGCTTATGCTGGAACAAGCACTGATCGAT
TTTTGGCATCAACGGAGATTTTCCAAACCGAAAGTAACGGAAACAAATCA
AGAATACATGATTTTTACGCGGGCGTCCTTTTGGGCGGACAACCCAAAGA
GAAAAATCAGGGTGCATGTACAGCATATTGTGCAAAAGAAGGATTTTCTT
ACGCTGCTCTTTTGACCCAATCAGCTGTCGAGTTTGATTGTTTTTGTGGA
AATACTCAGGGAGCAGCTTGCTCAGCAGGTCCATGTTTAGACGTATACGA
TGCAAGTGGTTTAGTACTAACACCACCAACACTTGGCTCAGAAATTAAAC
TCTTTGATACCATTAGTCTTGATGCTGGCACAGGAATGACCAACTTTGAT
ACCATTGGTGTGCATTATGATGGTAGAATCAAAGAATATGATTTCTCGAA
CAGTGGATTGGTGAAATCCATTAATATTCCTAACCTTGAACAAGTCAATG
TTTCTTTGGAAATGAACTCTTTCTGGGCCGCCCGCTCGGAACCAACCTTG
GTCTCTGTGTACGCTGAAGTCGACGTTGAAATCAAGTGTCCAGATACTAT
CTTAGAGAACACTGATTTCGAATGTCTTTATTACGTCACATCTGGTACTG
GGCTGCAATCAGCATCCATCAAGGAGTCTGGTACTGAGAAACAAGCCTTG
TCCCTTGTGCCAGATCCAATGTATTTTCACATTGGTGGTAACATGAAAGC
GGACCGCTACAACGTCTATCCAGACTCGTTTGACCGCTTTAACAAACGTA
CCGCAATGTTTATCAACTTGAACCATGAGTTCGCGACCGATGCGTCTGTC
CGCGCGTTCGAAGCGTATGTTACTTGGCTTGACGATAGCGGTGAAGGTTG
TATGCATTGGATGATTTACAAACCGACGTGCAAAAACCCTGACGAGACAT
ATTGTAATTCGTTGAAAAAATGCATCGATGCTACAGAGACCTGGTGTGGG
GACCCTGAAGACTTTTCGACCTTCGTAGCGCCAGCTGGAAGTCCTGTATT
TTGTTCCGATGTCGAGCGATTCACAACTACAGACAATTACGCGTGTCCAC
ATATTGATACATTGATAACGGGACCGGAAGCCGATTACGAGGTTGTTTAT
ACTCATAAGACATGTACCACCTCGAAAGGTTCAAATGTGTGGAAAGTTCC
TGAGCCATACATGGCAAAGACCGGATACGTACTTGGTTGGATGCCAGACA
AAGACAAACCGCTCGATGTTGGATACTATAAGACATCTTTAACATTTGAC
GAAGCACGTAGTGTTTACAACTACTCTGAAATTTATGACGCGAGTGTTGG
TCGTACAATATCTCATCAGTATGCATACGCGAGCTTGAATCCTGTCATGC
ATATGGTCCGCGCGTACGCTTTCGCTCCTACAATGTTTGCCTACACACAT
ACAGGTCTAGCTTCTACTGGCACTCCATTGAAAGTTGAATTCGAAGCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_166:252861..264035+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049762 ID=TCONS_00049762|Name=TCONS_00049762|organism=Clytia hemisphaerica|type=transcript|length=11175bp|location=Sequence derived from alignment at scaffold_166:252861..264035+ (Clytia hemisphaerica)
aaattttttagcattttttatacATAGATTTACTACTTGTTactggaaag
tgaaattttgattGGCTTTGGGGTATGAGGTACCTTCTCATTATCTGCGT
AAGTAGTAGTTTTTTATATTCAattaactctctctaattcgaacattttt
tatcctatctctctgtaatttgaaGTAGAACGTCGATTTTCTTCAGTAAA
AAAACTGAgtaaaataattcgaaaattGTCTTGGTCCTTTGGAAAttgaa
ctaaagtctgtctcaatttaatatgcagcggagacaaaaaaggctgtagc
ttttgatagaattcgaataaAATAGCGGTTTTGcgcttgttgaaaagaca
aacaggagtggaaaGTTATGTTGaagataaaagtaaaaaaagagcGGAAA
GTGAAGATTGAAAATGCAGTAGAAGACAATCGATttcttcaataattgtg
ctataccatttttgaacttttggatcctcacatcTTCAGAtccttaagtc
ttaagtctggCGTTAAAAATCTtaacccttcgaacctactttagagcact
tacaaatcgtttgtggtttcaaaacttcctggggaatttcccttttttca
taaatattattatgaccttgattgtataaaaacaagaaaaaataaccAAA
CTTGCTTTTACAATACTTTAtgtttcatgtttccaatcgTCAGTTGTAAA
CTAAATGTTGACCTtgattgtatatttttattttactttttcatagacGG
TAGTGCAGTTAATGATAACGGCTTATGCTGGAACAAGCACTGGTACGTAT
TTATATTGAAGAAAGCGCTGAATTTATACCCCTTTTAAGTCATCGAGTGA
ATGAACTTATAAGAATATCATATTAAGTACAGTTTAAGAATTTGTAGATG
CTTTTTATAGATTGCTTTTTTGCTATCATGTGGAAACAAATCCCCTAAGT
ACctcttaggcaaaaatggatgatgggtatgtgcggacgggtaatggtcg
gttttttcacctttcaaagtctctctaatggttggaaaatcagaaagttt
taaattagtctctctaagggtcggaaaattcaggatttttaggatatttt
ttgatttcgagagaaaaaaatgtaataaagtctctctaagggtatgactt
ttttcaaaaatcgaaaaaaagaatttaaaaagtctctctaagggtcggtt
ttcggaggtcccgtctgcacatacccctcattcgccaaccctagtacccc
cctccccccagGAACAACTCTCAATGGAATTTTCGAATTACATTTGGTAT
GGTTTCCACATGATAGCAGCAAAAAGTACACATTTAAAGTTTTTAGTTTT
ACTCAGCctatttctttatttctctCTCGTGTTTAGATCGATTTTTGGCA
TCAACGGAGATTTTCCAAACCGAAAGTAACGGAAACAAATCAAGAATACA
TGATTTTTACGCGGGCGTCCTTTTGGGCGGACAACCCAAAGAGAAAAATC
AGGGTGCATGTACAGCATATTGTGCAAAAGAAGGATTTTCTTACGCTGCT
CTTTTGACCCAATCAGCTGTCGAGTTTGATTGTTTTTGTGGAAATACTCA
GGGAGCAGCTTGCTCAGCAGGTCCATGTTTAGACGTGAGtgtgtttttta
tgaaaatattagaTTAGAGTCGGTTAACATccatgtaatacagtaatatg
ggtgttattTGATAAAATGATAATTGTTACGGGGTAATATCAGTTTGAAT
TTTAACTACGATTTGACCCTTCAAATgttatattatttttatattatatt
tttgctTATCAACTTTAAGGCATACTATAATTGTTACCGCGtactttatt
atttttgtttttattccaTAGTTTCTAGAATAGGGTCAAGACCCCCCCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATA
AATGAAACGATTGTACAAGAGtcataattcaaggaagatcccccttatct
aagaagaccccccttaggtaagaagacCCCCCTTAACTGGCAACCCCCCC
TGAAGAAAGTCAAACTTTTAACACccccccttgcttttggtttatcaaaa
cccaagaccccccctaaatgtagctggggggtagaaactatgtaTTCAAA
ATCGTAATGAATTTTACTTCACTTATTAACGTCGAAATTTAATAGGTTTA
GATTGTAACCTTGGTGATCAGGAATGACAATGCCAGTATGTCTACgtgtt
ttagaaaaaaattgaataacgCGAAAATAAGCTAcctttggcccttttta
cgctggCTCTGTTTACGCCGGTCATTATTACGCCGGGGGGGGGACAGCCA
GGCAAACTAACAAACcgatgggtatgtgcggcggttaagggtatgttgtT
CAAGATAGTAAGATGTACTGTAAGGCTAGgcttttgagaaaaatgcactg
taaggctaggcttttgagaaaaatgcactgtaagggtatgaatttcaccg
attttttacTGCAGTGTGAGGGTGCGATTCTAGAAGCATATTTTTTTGCC
GCACACACAGTCAGTTGGTAACCCCCCCCCCGGTTATTACGCCAAAGATC
AATTTATTTCCTGTTAAACCGACCCTAATTTAATTTTCGATCCCTTGTGC
CGGCCCTAAACGCCAGCAATGAAAAAATAAGAGCCGGCATAAAAAGGGAC
GATAATTtagttaaaaatattcaaatacaTTTTTTCAATTACTAGGTATA
CGATGCAAGTGGTTTAGTACTAACACCACCAACACTTGGCTCAGAAATTA
AACTCTTTGATACCATTAGTCTTGATGCTGGCACAGGAATGACCAACTTT
GATACCATTGGTGTGCATTATGATGGTAGAATCAAAGAATATGATTTCTC
GAACAGTGGATTGGTGAAATCCATTAATATTCCTAACCTTGAACAAGTCA
ATGTTTCTTTGGAAATGAACTGTAAGAACAAATTCTTTTTTATGTATTCA
TGATacgcaccactgcaatgacttcgcgaaattatgcaacttttctgttg
tTTATTTCCaaccaatacgtcacttttctattgtttcagtgacgtattgg
gtggaaaattttaaaagttctcagaagactctccagtggtgcatatcatg
aattttaaaAAACCAATACGAATAAGGCAAATAGGTCTTGTTTTATAAGC
AATACcacaaaaattcgaaaacagGCTCGGAGATGCTTAGATCGAGGGCT
TgtcaaggctgaaaaatgcttataTTATAAcgatgcccggggggggggNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg
ccggggggggggggcactcatatggtccgacctacggcatgtgccgccct
taagggtaggtttttcgagaccctggaaatgcactgtaaggcgtgtactt
ttgataaaatGCACTACACAAGGGTTTTattttagctggatacactgtaa
gAGTGTGTTTGGGACTGCTAAGTtgcaagtctgacagtaaaaatctaaTA
TATCTTTATAGCTTTGACtcgcacccattttgatttgttttgaacattgt
gttgacatctcaggctcattttcaggttgtttcagcaaaataagatatga
aaacaaactacactgtaagggtctctCAGAAAtgttcggtaaaatgcact
gtaagagtaCCTTTTCAATGCTCaagagctgcactgtaagggtccgatta
tGAAAGCCAAgtttttggcggcacatgccgcCGTTTAGTAATCGAGTCAA
AACANctgtaagggtccgattatgaaagccaaatttttggcggcacatgc
caCCGTTTAGTAATCGAGTCAAAACCGTATCCTATGAAACTCTGCTTCTT
TTTTAGCTTTCTGGGCCGCCCGCTCGGAACCAACCTTGGTCTCTGTGTAC
GCTGAAGTCGACGTTGAAATCAAGTGTCCAGATACTATCTTAGAGAACAC
TGATTTCGAATGTCTTTATTACGTCACATCTGGTACTGGGCTGCAATCAG
CATCCATCAAGGAGTCTGGTACTGAGAAACAAGCCTTGTCCCTTGTGCCA
GGTTTGTGTTTTTTCCAGCCTTTTGACTTCACTTTAGTTATAGCTTTGAG
AGAATTTACACTGCCCTAGTTGCCTAATTGGGGCTAACATGTCTCACCAA
CAGggactttttggacctaccccggtggaggtcctataaattaacatatg
tttgtccgtccgttcgttcgttcgttcgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgtNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgttcgttcgttcgttcg
tccgttcgtctgttaccaacttttctcaggattgaatcataggaatcttt
tgatttttggtataaaggtgcaaaatggtggtggctaaaatgtgacggag
cccgattttcgagaaaaatattttggggcaaatttgggccaaaaaacggc
taaaaaacgggttttttggactttgtgaaaaatcggatcattaatttttt
ctgattttttgcataaaagtagggtaccatcataggtaaaagatggctgN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNattttgttggctcaaaaaacgcatgtttatctataaaaatcactat
taataagcatacatcaatgttcttagtcaaattactcaatttttttatga
gatagaggttttttttgctcacgagggcttacttttgaaaaatatgtgtg
tttaaacatggaattttttggttgcttggcgtgtttatatagaaaaactg
gccaaattcgatatttttttataagcacattatcaattacttaggtatta
gcttttctcgagattagctctttcattctttatgattttttacacaaaga
tgcataactataaatcctcgaatgtgacggagcccaattttcgaaaaaaa
cttttttggtcaaatttgggccaaaaaacggctaaaaacgggttttttgt
actttgtgaaaaattggatcattaattttttctgattttttgcatgaagg
tagagtatcatcataggtaaaagatggttcaagcaaatttttgcaaaaaa
attttgttggctcaaaaaacacatgtttatctataagaatcactattaac
aagcatacattaatgttcttagtcaaattactcaatttttttaagagata
gatgttttttttgctcctgagggcttacttttgaagaatatgtgtgttta
gacatgaaattttggttgcttggcgtgtttttatagaaaaactNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNttttataagcacattatcaattacttaggtattagc
ttttctcgagattggctctttcattctttatgattttttgcacaaagatg
cataattataaaccctcgaatgtgacggagcccgatttttgaaaaaaatg
tttcgggcaaatttgggccaaaaaacggctaaaaaggattttttggactt
tgtgaaatattggatcattgtttttttctgattttttgcatgaaaatata
gataaaagatggctcaagcagatttttgtaaaaaacgaattcttcagctc
aaaaaacgcaagttttttttattttatttttattactcATATGTTTTAAT
TAGATATGTCAATTCCGTCACAAATTGATGCCTAAATCTAACTAGAATCT
AACTACTTTTGATTTGCTGACAtgctgtcttgtagtaactgcgtgtcCCC
CCCCTGAACtacttttgatttgaaaaatgtttgattttgtaGAGATTCTT
GACACACATAATGTTGTTTCAACGATCTATTTGCAGTCTTCTATAAATAT
TCTGGTCGTTTTCTataatcagtgccataacatattggcacttttcgcta
atttaccatttttcgaaaattgaagttcgagcgagaatgtcaatttttgg
ccttcaacttgatttcaacgattatttcgatctgggagggatttattggt
ttctaggctatatttcaagccctactgcgttaaaactcagagttaaaact
ctacccttcgaacctactttagagcacttgcaaatcgattgtggtttcaa
aacaccccggtgggtttcctttttgtgccaagtttttcgtcactgattgt
agattgGATTAGGTCTAAGAAGGTGATTTCCCTTCATGATATTCGTGATA
TGCGCCACTGTAATGATTTCACGAATTTGTACTATAACTTTTTTCGACTC
TATACgttacttacaaccaatcagctgttatGAATATGATGTTGCATATC
ATGATTACGTCACTTTAAACCAACCAGCTGCGTTATAAAAAATCATCTCT
TGAGTCCTTGGAAGACATTGCGATGGGTGATTTCCCTTCATGATATTCGT
GATATGCTCCACCTGCTATTAATATAACGTAATGTCCGAAATCATTGAAG
TGGTACATATCATGATTACGTCACTTTAAACCAACCAGCTGCGTTATAAA
AAGTGACGTCATGTCAGAAGATTGtagtaaataaagcctggaatataCGG
GAACGAGGTTGGGTACATATCCTAAATATTTTGACCTTCTTTTTCCATAG
ATCCAATGTATTTTCACATTGGTGGTAACATGAAAGCGGACCGCTACAAC
GTCTATCCAGACTCGTTTGACCGCTTTAACAAACGTACCGCAATGTTTAT
CAACTTGAACCATGAGTTCGCGACCGATGCGTCTGTCCGCGCGTTCGAAG
CGTATGTTACTTGGCTTGACGATAGCGGTGAAGGTTGTATGCATTGGATG
GTATGTAActtttgtttggaaattttttttctgtaggAAGCTTTTAAAAT
TGCTTGAACAAGCGAGACTGGAAGAAGGATTTCCAATAGCACTTTTTACA
GAAAACTTAGTTAGAATTGCTTGAATGAGCGGAGATAATGTACTTGCTCA
ACTGGAATTAAAAGAGAGGTTGGATTTTCCTGCAGCTCCCAGAGTAGATT
GCTGAAACTGAGATAATTATGTACCCTTACAATATTGGTACCggatttgt
cattttattggGTTTGTCTTTTAATGTGTATTTCGGGAGGGAAATGACTA
TCTAGGTGTGTGGCATTTGGTCAATAGATGTGTACAAAGTGGCAGTTTTT
ACACTAGGCTTGAATAGTGGTAGTATTCGAGcatttgttttgaactattt
cCATCAATGATCTTTACTATTGATTttgttgtatatattttttctttgga
ttggTTTCGCTAGTTTTGGACATCagttgttaaactttttcttttggaaa
ggtaGGTTTTTGGCCTTCATCAACAGCTCTGTATTGCTTTCTTCATGTTG
CGTCTTTTAGCCGAAATCttaatagatagatagagtcgatattttacgtg
gatatcccagtaatctaggacttttagacagtctttcgattgttttcacg
gggtccacggccagccagctcggctatctataaactgaacggaacattgg
aaggggcggggattcgaaccgcgaatccctggtttgagacgctgacgcct
ttgaccattTGGCCATCGCTCCTTAAAATCAAACcgaatttaaacttttt
aaaaactttcttcttgttttttaCTATAGATTTACAAACCGACGTGCAAA
AACCCTGACGAGACATATTGTAATTCGTTGAAAAAATGCATCGATGCTAC
AGAGACCTGGTGTGGGGACCCTGAAGACTTTTCGACCTTCGTAGCGCCAG
CTGGAAGTCCTGTATTTTGTTCCGATGTCGAGCGATTCACAACTACAGAC
AATTACGCGTGTCCACATATTGATACATTGATAACGGGACCGGAAGCCGA
TTACGAGGTTGTTTATACTCATAAGACATGTACCACCTCGAAAGGTATGT
CAAATAGGTTTTTTCGGTCACGTAACTTTTGTCATTACTTTTTATCTGAT
ATGGCACTATCGCAAAGCTGAAACttaggcaaaacctaaattacgtcaag
aacatcacttgcctcgtattcaaacaattacaaTGGTgattgagacatta
aatgatttttttatgaatagaaagtagttttattaAAGTCcgcgctggga
gttaatcaccatggcaatattttcaaaacgaggccagtgatgttcgtaaa
gtaatttatgaaaagctctatttgttGTTATAGTATTCTTAGCTTCACCG
GAGTGCGCTATATTGAatggaattttttgaaataattgttTATAGGTTCA
AATGTGTGGAAAGTTCCTGAGCCATACATGGCAAAGACCGGATACGTACT
TGGTTGGATGCCAGACAAAGACAAACCGCTCGATGTTGGATACTATAAGA
CATCTTTAACATTTGACGAAGCACGTAGTGTTTACAACTACTCTGAAATT
TATGACGCGAGTGTTGGTCGTACAATATCTCATCAGTATGCATACGCGAG
CTTGAATCCTGTCATGCATATGGTCCGCGCGTACGCTTTCGCTCCTACAA
TGTTTGCCTACACACATACAGGTAATTAAAAATTCTTcgctttttgtttt
ctttgaactATGGACCGGGTTCACCGGGTTCAAAATCGGGTACTcgtagg
ttccaaataaacgggccctcccgcttgttaatttctcgaaaatttaCCTT
ATGCCTATATTTACCttgttttgggttttcagaagtacaatttccaaccc
cccggcaattaggtccccccccccccgtttattaaaatctcgaaaatttt
ccaacccccaccCCGTTTATTCAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccgtttatt
tggaacctaagagtaaagtTTGGAAAAAACAAGATTGCTTGATTAAACTT
GAAGTGCCTTTACAATCTCCAGTTGTCACCTTTAGTTGAAGCAATGAATT
AGAattcaattttcgcgaaaactCCTTGGTTAAATAGCGACTTACTAACA
ATATTGTATGACAGACTATACATTTTCCAGTAAGGCGATTGTCCTTAAGA
ACACTCAATGCAAAATCAGTATCCCTCTAAAAAGGAATGAgctgaagttt
ttataagatacttcattAATTGATCATTTGAAGTAATGGAGATAAAGCGT
CCCAAAtgaaataagagcttgtaaaattCCAACTCACCCATTCTAAAAAA
TGCTAGCTAGAAGCTAGTTAATTGCCGTCATACTCAAtcaatacacccct
gtttcacagacccactgggaccctagccccactggaaaatttggaaaaaa
acccTGTAATTCCAGCCCTactaggaaattgactttgattttgtcCCTAT
TCGAAATTCCAACAATATAAtgacaatataatttctatccccaatgggat
ttcaataggaatttttatccacaCTCAGGAAAAGTTCCACACAAAAATTT
AAGGGAGAAAAATACACTgaccatctttgattggagctCGTTTGGAAGAA
GTACCCGCAATTGTAATGTTAAAACTTTCCATAACGTCAAACTGCGGCAc
gttgagtagtgctaccatcagcgtaccactttcaaaaaaaaaactcaaaa
taaagattttcgGTTGGTCGCGATTGAGAAACTTGCCTCCATGGTTTATA
GAAAATCTTTAATGGCAATTTAGATCACCTGCtattcttataacaaaaat
tcCTTCGGCAAGTTTGAATACTTGCCGGAATGAGTTTGTGAATCAATTTC
tacccaaaaagaaaaaaaggtagagttattcaagattttgtgaaatgtga
ttttttttggaaaagaaaaatttcctcACATTCAAAATGTAAGAAGCTCA
GTTGAGGAAATCAGAACTTTTTTTTGCAGGTCTAGCTTCTACTGGCACTC
CATTGAAAGTTGAATTCGAAGCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031554XLOC_031554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049762-exon-scaffold_166-1491911889:252861..252958TCONS_00049762-exon-scaffold_166-1491911889:252861..252958Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:252861..252958TCONS_00049762-exon-scaffold_166-1510915933:252861..252958Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:252861..252958TCONS_00049762-exon-scaffold_166-1575043694:252861..252958Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:253607..253652TCONS_00049762-exon-scaffold_166-1491911889:253607..253652Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:253607..253652TCONS_00049762-exon-scaffold_166-1510915933:253607..253652Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:253607..253652TCONS_00049762-exon-scaffold_166-1575043694:253607..253652Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:254247..254494TCONS_00049762-exon-scaffold_166-1491911889:254247..254494Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:254247..254494TCONS_00049762-exon-scaffold_166-1510915933:254247..254494Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:254247..254494TCONS_00049762-exon-scaffold_166-1575043694:254247..254494Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:255756..255981TCONS_00049762-exon-scaffold_166-1491911889:255756..255981Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:255756..255981TCONS_00049762-exon-scaffold_166-1510915933:255756..255981Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:255756..255981TCONS_00049762-exon-scaffold_166-1575043694:255756..255981Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:256967..257161TCONS_00049762-exon-scaffold_166-1491911889:256967..257161Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:256967..257161TCONS_00049762-exon-scaffold_166-1510915933:256967..257161Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:256967..257161TCONS_00049762-exon-scaffold_166-1575043694:256967..257161Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:260161..260360TCONS_00049762-exon-scaffold_166-1491911889:260161..260360Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:260161..260360TCONS_00049762-exon-scaffold_166-1510915933:260161..260360Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:260161..260360TCONS_00049762-exon-scaffold_166-1575043694:260161..260360Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:261190..261454TCONS_00049762-exon-scaffold_166-1491911889:261190..261454Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:261190..261454TCONS_00049762-exon-scaffold_166-1510915933:261190..261454Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:261190..261454TCONS_00049762-exon-scaffold_166-1575043694:261190..261454Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:261806..262081TCONS_00049762-exon-scaffold_166-1491911889:261806..262081Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:261806..262081TCONS_00049762-exon-scaffold_166-1510915933:261806..262081Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:261806..262081TCONS_00049762-exon-scaffold_166-1575043694:261806..262081Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1491911889:263990..264035TCONS_00049762-exon-scaffold_166-1491911889:263990..264035Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1510915933:263990..264035TCONS_00049762-exon-scaffold_166-1510915933:263990..264035Clytia hemisphaericaexon
TCONS_00049762-exon-scaffold_166-1575043694:263990..264035TCONS_00049762-exon-scaffold_166-1575043694:263990..264035Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_166supercontigscaffold_166:252861..264035 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0282529	0.0558156	0	0	0	0	0	0.0258402	0.0721162	1.42369	3.13392	0.378628	0.178454	0.203091	0.167005	3.60047	5.9646	0.574376	0.702651	0	0.166328	1.06737	0	0	0	0.0283088	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049762 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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