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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049841 ID=TCONS_00049841|Name=TCONS_00049841|organism=Clytia hemisphaerica|type=transcript|length=697bp
ATTACACTTAGCACGATGGATAATGCTCATTGCAACGAAAGATCTTTGAA
TACGAATGAGAACTCTGAAGTCGTGCAAGCCAAGAAATCTGACGACTCTC
GTATCTCAACACTTAAAGATGAGTATGAAAACAAGATTGAAAAACTgaaa
cttgaaaataaaatcaaagttttGGAAATCGAAAACAAAAGTCAATTGAA
GATAATGCAGCTTGAAAAAGATAATCAAGCCCTTAAACACGAGCTGGATG
TTTTGAAGCTAAAAACAACACATGATGtcgaatcaaaaaaattaactgAT
GATAAGAAACTTATCGAATTGGAAAAGAAAATGGcagaaaaggaaaacaa
atacaaaataaaaatcaaggaGCTGGAGACAGGAAACCAGACTAATTTGT
TGAAAATGGAGCAAGAGAAAGACACAGTGATCCTGAAACTAGAAAACGAG
ATTGAAATGTTGAAAGCTAACATCAAGGAGGAGGTACAAGAGGAGGGGAG
ACCAGAAGAAAGGTTTTGGCTTAATTCTGACAAGCTACTTTGGGGAATTG
ATTCATTCTTTAGAGAAAAAACTGTTGATTGGAAACTATTCTCTTCGTAC
CAAGAGTGGTTTACAGAAATCATATCAATCATATCAAAGAATAAAAAGCC
ATTTTATGTTACAAGTGGTGACAACAAGTATTTGTTCATGAGAAAAG Run BLAST on NCBI protein sequence of TCONS_00049841-protein >TCONS_00049841-protein ID=TCONS_00049841-protein|Name=TCONS_00049841-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
ITLSTMDNAHCNERSLNTNENSEVVQAKKSDDSRISTLKDEYENKIEKLK
LENKIKVLEIENKSQLKIMQLEKDNQALKHELDVLKLKTTHDVESKKLTD
DKKLIELEKKMAEKENKYKIKIKELETGNQTNLLKMEQEKDTVILKLENE
IEMLKANIKEEVQEEGRPEERFWLNSDKLLWGIDSFFREKTVDWKLFSSY
QEWFTEIISIISKNKKPFYVTSGDNKYLFMRK Run BLAST on NCBI transcript from alignment at scaffold_166:350353..351049 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049841 ID=TCONS_00049841|Name=TCONS_00049841|organism=Clytia hemisphaerica|type=transcript|length=697bp|location=Sequence derived from alignment at scaffold_166:350353..351049 (Clytia hemisphaerica)
CTTTTCTCATGAACAAATACTTGTTGTCACCACTTGTAACATAAAATGGC
TTTTTATTCTTTGATATGATTGATATGATTTCTGTAAACCACTCTTGGTA
CGAAGAGAATAGTTTCCAATCAACAGTTTTTTCTCTAAAGAATGAATCAA
TTCCCCAAAGTAGCTTGTCAGAATTAAGCCAAAACCTTTCTTCTGGTCTC
CCCTCCTCTTGTACCTCCTCCTTGATGTTAGCTTTCAACATTTCAATCTC
GTTTTCTAGTTTCAGGATCACTGTGTCTTTCTCTTGCTCCATTTTCAACA
AATTAGTCTGGTTTCCTGTCTCCAGCtccttgatttttattttgtatttg
ttttccttttctgCCATTTTCTTTTCCAATTCGATAAGTTTCTTATCATc
agttaatttttttgattcgaCATCATGTGTTGTTTTTAGCTTCAAAACAT
CCAGCTCGTGTTTAAGGGCTTGATTATCTTTTTCAAGCTGCATTATCTTC
AATTGACTTTTGTTTTCGATTTCCaaaactttgattttattttcaagttt
cAGTTTTTCAATCTTGTTTTCATACTCATCTTTAAGTGTTGAGATACGAG
AGTCGTCAGATTTCTTGGCTTGCACGACTTCAGAGTTCTCATTCGTATTC
AAAGATCTTTCGTTGCAATGAGCATTATCCATCGTGCTAAGTGTAAT Coding sequence (CDS) from alignment at scaffold_166:350353..351049 >TCONS_00049841 ID=TCONS_00049841|Name=TCONS_00049841|organism=Clytia hemisphaerica|type=CDS|length=696bp|location=Sequence derived from alignment at scaffold_166:350353..351049 (Clytia hemisphaerica)
TTTTCTCATGAACAAATACTTGTTGTCACCACTTGTAACATAAAATGGCT
TTTTATTCTTTGATATGATTGATATGATTTCTGTAAACCACTCTTGGTAC
GAAGAGAATAGTTTCCAATCAACAGTTTTTTCTCTAAAGAATGAATCAAT
TCCCCAAAGTAGCTTGTCAGAATTAAGCCAAAACCTTTCTTCTGGTCTCC
CCTCCTCTTGTACCTCCTCCTTGATGTTAGCTTTCAACATTTCAATCTCG
TTTTCTAGTTTCAGGATCACTGTGTCTTTCTCTTGCTCCATTTTCAACAA
ATTAGTCTGGTTTCCTGTCTCCAGCtccttgatttttattttgtatttgt
tttccttttctgCCATTTTCTTTTCCAATTCGATAAGTTTCTTATCATca
gttaatttttttgattcgaCATCATGTGTTGTTTTTAGCTTCAAAACATC
CAGCTCGTGTTTAAGGGCTTGATTATCTTTTTCAAGCTGCATTATCTTCA
ATTGACTTTTGTTTTCGATTTCCaaaactttgattttattttcaagtttc
AGTTTTTCAATCTTGTTTTCATACTCATCTTTAAGTGTTGAGATACGAGA
GTCGTCAGATTTCTTGGCTTGCACGACTTCAGAGTTCTCATTCGTATTCA
AAGATCTTTCGTTGCAATGAGCATTATCCATCGTGCTAAGTGTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049841-exon-scaffold_166-1491911889:350353..351049 | TCONS_00049841-exon-scaffold_166-1491911889:350353..351049 | Clytia hemisphaerica | exon |
| TCONS_00049841-exon-scaffold_166-1510915933:350353..351049 | TCONS_00049841-exon-scaffold_166-1510915933:350353..351049 | Clytia hemisphaerica | exon |
| TCONS_00049841-exon-scaffold_166-1575043694:350353..351049 | TCONS_00049841-exon-scaffold_166-1575043694:350353..351049 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_166 | supercontig | scaffold_166:350353..351049 . |
Blast
The following BLAST results are available for this feature:
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