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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049788 ID=TCONS_00049788|Name=TCONS_00049788|organism=Clytia hemisphaerica|type=transcript|length=702bp
ATAAAAGGGCTTTAAAACTTTTCTAAAATATCGATTAACGCAGTCGGCAA
AATTCAGAAGATAATACACAAAGATAGCAATTGATAAAATGATCAAGTTG
CTCTTAATCTTTGGCCTTCTTGGTCTAACATACGGGCAATGCCGAAGATA
TCCACACTGGCCACGTGAATTTCGCTGGTCATATNCCTTCTTGGTCTAAC
ATACGGGCAATGCCAAAGATATCCACACTGGCCAAGTGAATTTCGCTGGT
CATACGCAGGACGTCTTGGTAATGGCTGGAGATGCACAAGAATTTTGGAA
ACAGCAGATCCACACACATGGGCGGACAATTACTTTTGCGAGCGAACAGG
ACCAGCCTACATTGCAAGTGGTATGAGATGGAGTTCCGCTGGTCCAATCT
CTGGCATGAGATGCACACGAATCATCGAGTTCAGTTCACCAGCAAAACAC
ACATGGCGAGATAACTATCTATGCGTTCCACATCACAGTCCCTTCATTTT
TGAATGGTCGATGGCTGGACCGATCCCTGGAAAACATTGCGTACAATGGA
TCGAACCATCAGAACCGTTGGGTCATACATGGCGTGATAACTTTTTGTGC
GGTACCGTGTTCCCACGTGCACGACTCACCTACAATTAATTTATTAACAa
tgattgaaatttaaaatagaCGATTAGATTACAATAGTTTGTAGACGATg
ac Run BLAST on NCBI transcript from alignment at scaffold_166:496464..497313+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049788 ID=TCONS_00049788|Name=TCONS_00049788|organism=Clytia hemisphaerica|type=transcript|length=850bp|location=Sequence derived from alignment at scaffold_166:496464..497313+ (Clytia hemisphaerica)
ATAAAAGGGCTTTAAAACTTTTCTAAAATATCGATTAACGCAGTCGGCAA
AATTCAGAAGATAATACACAAAGATAGCAATTGATAAAATGATCAAGTTG
CTCTTAATCTTTGGCCTTCTTGGTCTAACATACGGGCAATGCCGAAGATA
TCCACACTGGCCACGTGAATTTCGCTGGTCATATNCCTTCTTGGTCTAAC
ATACGGGCAATGCCAAAGATATCCACACTGGCCAAGTGAATTTCGCTGGT
CATACGCAGGACGTCTTGGTAATGGCTGGAGATGCACAAGAATTTTGGAA
ACAGCAGATCCACACACATGGGCGGACAATTACTTTTGCGAGCGAACAGG
ACCAGCCTACATTGCAAGTGGTATGAGATGGAGTTCCGCTGGTAAGTGAT
GGAACGTTTttcaacgttgaaacaacgtttttcgGTTCTCTGCTAAGTTT
CCCTTGTATCTCAGGCGTTCACTATCTTCCTGTTAGCAACAGaaaatatt
cattaaaaaattgataattattTCTTCATCTCACAACAGGTCCAATCTCT
GGCATGAGATGCACACGAATCATCGAGTTCAGTTCACCAGCAAAACACAC
ATGGCGAGATAACTATCTATGCGTTCCACATCACAGTCCCTTCATTTTTG
AATGGTCGATGGCTGGACCGATCCCTGGAAAACATTGCGTACAATGGATC
GAACCATCAGAACCGTTGGGTCATACATGGCGTGATAACTTTTTGTGCGG
TACCGTGTTCCCACGTGCACGACTCACCTACAATTAATTTATTAACAatg
attgaaatttaaaatagaCGATTAGATTACAATAGTTTGTAGACGATgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049788-exon-scaffold_166-1491911889:496464..496854 | TCONS_00049788-exon-scaffold_166-1491911889:496464..496854 | Clytia hemisphaerica | exon |
| TCONS_00049788-exon-scaffold_166-1510915933:496464..496854 | TCONS_00049788-exon-scaffold_166-1510915933:496464..496854 | Clytia hemisphaerica | exon |
| TCONS_00049788-exon-scaffold_166-1575043694:496464..496854 | TCONS_00049788-exon-scaffold_166-1575043694:496464..496854 | Clytia hemisphaerica | exon |
| TCONS_00049788-exon-scaffold_166-1491911889:497003..497313 | TCONS_00049788-exon-scaffold_166-1491911889:497003..497313 | Clytia hemisphaerica | exon |
| TCONS_00049788-exon-scaffold_166-1510915933:497003..497313 | TCONS_00049788-exon-scaffold_166-1510915933:497003..497313 | Clytia hemisphaerica | exon |
| TCONS_00049788-exon-scaffold_166-1575043694:497003..497313 | TCONS_00049788-exon-scaffold_166-1575043694:497003..497313 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_166 | supercontig | scaffold_166:496464..497313 + |
Blast
The following BLAST results are available for this feature:
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