|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049818 ID=TCONS_00049818|Name=TCONS_00049818|organism=Clytia hemisphaerica|type=transcript|length=1799bp
AATTTCAGGATAAAGATTAAAATGTCGTTAGCTGCGCCAATGTTTCGGTG
GTTAGATTTACTGGAGAAAGAATTTGATAAAGCATTTGTGGAATTAGATG
TTTTGCTTGGCGATATTGATGAAGACCAGTCGGAAATCACTTTTGCTGGA
CGACAAAAATTGACTGCTCTTTCATCAGCCTTTgctcagctggcacacaa
atCACAGACTATCTTTCAATCTAATGCTAAATTTGAGGCAGAGTTGCTAT
CACTGAGGACGTCGATGACCGAATCACAGGCTAAAGTAACAGTgatggaa
aaagaattgaaaaatactTTACTTCAGTTACATGCAGTTCAATTGCAACT
CCATTCGAATACTAACACAGAAAATCCTATCGACTCAAACGTGATATTGA
ATAGATTGGAAAACGAATTGACTACATTCCGAAGAGATGCAATGAAAGAA
ACACAACTGAAAGCTGAAGTCAACCAGtaccaaaaagaaaatgataacCT
TCGAAGAGACGTCTTGACATTGCAAGGTGAAGTATACGGTGCACGTTTAG
CTGCGAAATATCTTGACAAAGAACTCGCTGGCAGgatACAACAGATACAG
TTACTTGGAAGGAATCTCAAAAGTGAAGAACACAACTTGCTTTGGAATCA
AATCGAATCCGAAATTCATCTCCACCGACACAAAACTGTCATCAGGGCGT
GTCGAGGGCGACCAGGCGTGAACAACAAAGTAACATCTAAAGTGCCGCCC
AGAGAAGAGATTAATGAAGATGACGACGTGGCGAGTGTTCAACGAAAGAA
GAGGGGGATAGGAGAAGCACGGTTGGTGAAAATGCGAAGAGAAAAACACG
AGGGGCTTGGAATCTCCATCACGGGTGGTAAAGAGCACGGCGTCCCTATT
ATAATTTCTGAAATACACGAAGACATGCCTGCGCAACGTTGCCAAGACCT
TTACGTCGGTGACGCAATCCTCTCCGTCAACGCCACTGATCTGAAAGATT
CGACGCACTCACAAGCGGTTCACGTTTTGTCGCGCGTGCACGGTGACATC
ACGATGGAAGTGTTGTATGTAGATGTTGATGAGTCAGCAGAAGAGGATGA
TAATTGGGAAGAAGACGCTGAACAAAGATACAGTTCGGTTGGCTTGGTAG
ACGACCCTTTCACGCTAACCAGCAATGAAAACAACGAAATCGTCATGACT
AATTCACCTTCAAAATCCAGTATAAAGAAAACAAGTGCGTATACCTACGC
AACACCCGCTTTTTCAAAGCTGGATGAAAACGAGTCTGAGAAAAATCAAG
ACAAAGAAACCGAGAAAATCACTAGTAATGGTAGTGTGGTAAGAGACAGT
CATTTATTACGGAACTCTTCAACGTCATCCGGTGGTAAATATCCGGGTAT
GCTAAAACGAGTTGATCCGAGTTGATCCCCACTATCTCTTCAGAAGCATT
TTGGTATCTTGGAATTACTTAGCAATATCTTCGTTCAAACAAATACGTTT
TGCGATTGACGCTTTTTTTTGGATTCTCTCTCTCCATGTGACGCTCTTAC
AACGAGTTTTAAAACGAAAGTGTTATGGAATGACCGAGTTAATCCAAGCT
GATCCAGACTCCCTTAATCAcgttattaccgagtttatgtatgtgtgttt
ttcagcgacggagacggtaaggttctaatttgactagatcctaactagct
gaggacgacggtaagtcagcacttttaccgtcctcgattttgcgggtcag
aactgcgggttattccaaatcgcttcagtcactttaccgtcctcaaaag Run BLAST on NCBI protein sequence of TCONS_00049818-protein >TCONS_00049818-protein ID=TCONS_00049818-protein|Name=TCONS_00049818-protein|organism=Clytia hemisphaerica|type=polypeptide|length=474bp
NFRIKIKMSLAAPMFRWLDLLEKEFDKAFVELDVLLGDIDEDQSEITFAG
RQKLTALSSAFAQLAHKSQTIFQSNAKFEAELLSLRTSMTESQAKVTVME
KELKNTLLQLHAVQLQLHSNTNTENPIDSNVILNRLENELTTFRRDAMKE
TQLKAEVNQYQKENDNLRRDVLTLQGEVYGARLAAKYLDKELAGRIQQIQ
LLGRNLKSEEHNLLWNQIESEIHLHRHKTVIRACRGRPGVNNKVTSKVPP
REEINEDDDVASVQRKKRGIGEARLVKMRREKHEGLGISITGGKEHGVPI
IISEIHEDMPAQRCQDLYVGDAILSVNATDLKDSTHSQAVHVLSRVHGDI
TMEVLYVDVDESAEEDDNWEEDAEQRYSSVGLVDDPFTLTSNENNEIVMT
NSPSKSSIKKTSAYTYATPAFSKLDENESEKNQDKETEKITSNGSVVRDS
HLLRNSSTSSGGKYPGMLKRVDPS Run BLAST on NCBI transcript from alignment at scaffold_166:587305..595213- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049818 ID=TCONS_00049818|Name=TCONS_00049818|organism=Clytia hemisphaerica|type=transcript|length=7909bp|location=Sequence derived from alignment at scaffold_166:587305..595213- (Clytia hemisphaerica)
AATTTCAGGATAAAGATTAAAATGTCGTTAGCTGCGCCAATGTTTCGGTG
GTTAGATTTACTGGAGAAAGAATTTGATAAAGCATTTGTGGAATTAGATG
TTTTGCTTGGCGATATTGATGAAGACCAGTCGGAAATCACTTTTGCTGGA
CGACAAAAATTGACTGCTCTTTCATCAGCCTTTGCTCAGCTGGCACACAA
ATCACAGACTATCTTTCAATCTAATGCTAAATTTGAGGTAAATTATAATG
GCTGACCTCAGGGATATAAAGAGCAAGCGGGGGTGAACATTCTGATTTTT
GCCCCATTTTTGGGGGGAAATGAAAAAATTTTGGAAATTTTGATTGCATA
GGTAACTTCACTGATCTCAAAGTGATCTTGTAGAAGACCTGTTTAAAGCA
ATAAAATCCAAACCAATTTTTCAATAAAACTTCATTTTCAAGCAGTTTCA
AGGCTATATTTACAAGTTTTCCAAAACTTTAAACTTGATTTAAGGTATTT
TTATGTTAACCATATGGGGGAACCGCAAAATCGTCAAATAACTGGGGGAA
AGCAAAATTTGATAATATCCGACTGCTTCACCCGATCAATTTCATTCGAG
CAAAATCAATAGACGATATCGGCTTTACATAAAAACTCAGATTTGATCCC
TGAGAATTCCCCACAATGCTTTGTGCAGAAAAAATTTTACCGTGAACTTT
TTTCCGCGCAAAGCATTGTGGGGAATTCTCGGGGATCAAATCTGAGTTTT
CATGTAAAGCCGATATCGTCTATTGTTATTGACTGGCTATTGAAAATTTG
GATTAAAAAATACTGTAAAGTACTGTAATGAACAAACACATTGGTCATTA
AACAATAAACGAAACCTTTGAGACTTTCTCAGGTCATAATTAACGATAAC
GAGGAATTATATTATGACCTTTTTAGGTTATTTTGAGATGAATGAAAACT
CTGAACCATGTTGTTACTAGTTCTTTAACATGGTTTGTGTCTCATTACAC
ATAAAATTTAAAAATTCCCATGGATTAAAAATCAGAATCACCTCTTACAG
TATGTGGCCCCCAAAACGGCGATCAAATTTAAAATTTTTCTCAAAGCTAG
AGGAAAAGACGTTTTACAAAAATTTTTCTTGCATGCAAAACTTTAACATC
TCTACTTTATTTCCCGACAGTTCTTTTTCAAAATTTTCAATTTCANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGAAATAGTTCCATTCATGTATGGAAAAAGCT
GTGAAAATTTGAGAAGAAAAGCTTAACTGAAACTGAAAATATTAAGCTTT
AAAGGTATTTTTCTCCTTTTGCAGAATAATGACAGAATTTGCCATTTTTG
CTGATTCAGCGAAACTTTTTATATATAATATTAATTTTTTGTTATAAGCT
ATTAACTCAACCTGATAGGAATGGAATTCCAAGATTTTTTGCTGTTTCTC
ATATTTAGAATTTTCGGTTTTATCAATACTGATTCTAGGGTCCCAAAATA
CTGGTTGACCTTTAAGATGCTATATCTTTTACCCATCCTCTCTAAAGTCA
CAGATGTATCTGCATTTTCTGAACGGCATTAGGTGTAGAAAGTTTCCTAT
ACCCCATTTTCATAACTTATTTTCAATATCCAAGGAGCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTGAGTTATATGCAATTTTTATCTAATTTTG
GTGTTAAAATATCTCCTTCATACGCAAATATGTTATTTTGAATCTGTCTC
AAACCATCAAAAACATGCTCCTCTTTTAGTATAACCATCATTCTTTCTAA
ATAAACAAAAATCGTTTAATTCTGATAAATCTACCAGTGGATACCCCTTA
AAACCCACAATAAAAAGTGGTACCCTCTATCTCATTGTTTAGTTGGAGTG
TAAGGCTGAAACTTTTTGTGTTGAAAGTACGTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAGTGAAACATACCACATAAAATTAAATCTGGTAGTTATGAAAGCC
AAAAATGCAACATTGTGGGTTTTAAGGGGTATGTGGTTTTAAGGGGTATC
CACTGGTACAAGTCAGAATCCTCATTTTAATGACAACCTCCGTTTTGGGG
GCCGTCTCCGTTTTGGGGGCCATATACTGTAAGCTCTGAAGACTCTATGA
AGTGTCCATTCATGTAATTTTAAATCATATCCTTAGAATCTTATATTTTC
TTGCTCTAGGCAGAGTTGCTATCACTGAGGACGTCGATGACCGAATCACA
GGCTAAAGTAACAGTGATGGAAAAAGAATTGAAAAATACTTTACTTCAGT
TACATGCAGTTCAATTGCAACTCCATTCGAATACTAACACAGAAAATCCT
ATCGACTCAAACGTGATATTGAATAGATTGGTAAGGTATTTAAAAAGGTT
TTGTTTTTAAATAAGAGTGATATCGTTTGTTTACTCATCAATTTTAATTC
ACAAGCTTTCTCACATTGGATGTAGAGCAAATATTTTTTTGCCTTTATCA
GCACAATATATAAATAGCAAGACACTGTCCTGTGTCTGATATGAAACGGA
GACACTTAAGTTAAAATATACCTTTTAAATGTAAAATTCTCGGTTTGGAG
ACAATAAGCAGTTTATAGTTACATTATTATTGCAACTCAAATGTCAAATT
TTGAGTACTTTAATTTTTGGACATTTCTAGTTCGTCCACTATTATAATCT
GGGTATTAGATTTTCATAAATCTTGTTAAGAATGACCATTTTCCACTAAC
ACTTTAAAATTGTTAATATTATGAAAATAATTTATCTTTTCATTACTAAA
ATGAAATTGGGGCTGGGCTTAAAACATTGTTGGTTTGCCGTCACCCGACC
CTAGATTTTGGAGGTGGGTCGCTCGGTCGGAATTTTATTTTATTTTGGCG
ATTTATGAAATTTTCGTCCATGGAAGGGTTAACAGTTTGTTTAGGTAATT
TTGAATAAAAAACAGAAGTGCTAGCAGCGAATTTACGATTCTAATGCTTG
AGACAAACAAGATACGAGTTTTGATTTTTTATTGTTTGAAGTTTTTGAAG
GAAAAAAAATCTTCTTTAAATGGCAATAAAATTTTTTGGGTCGGCAGGTT
TCGAGGTCGGGTCGGTCGGGTGACGGCAAACCAACAATTTTTTAAGTCCA
GCCTGGTTTGAGTTGAGAAATGTGTTAAAGGTTTATAAGGCATTTTAAAC
TGAAGGGACGAAAAGACTTGCTCGAGTTAAAGTACAGGTTCGAGTTAAAG
AGACTCTACTGTATCACCGCAGGTTTATATTATGAACTTTGATAGAAGTC
AATATATTTCTTCAGGAAAACGAATTGACTACATTCCGAAGAGATGCAAT
GAAAGAAACACAACTGAAAGCTGAAGTCAACCAGTACCAAAAAGAAAATG
ATAACCTTCGAAGAGACGTCTTGACATTGCAAGGTGAAGTATACGGTGCA
CGTTTAGCTGCGAAATATCTTGACAAAGAACTCGCTGGCAGGTAGGTCCT
TTTGATTTGGGTGCTTCTGTTCATTTCTTCGAGCTCTGATTGAAGTTGGT
GTGGATATAACTTTAGTCCAAGGTTTTGAATGATAGGTCAGTGGATATGA
TGGCTTTTCATGAAATTAAGCCTCGTCCAATTATCATACATGTGTAGAAC
GTGGTTGTTTTGATATTGCAATTTTATTATATACATTTCTTCACAGTATG
AAAATTTGAAATCGAATTCCAATTCCTTATAAGAATGACGACTGTTCTTT
GAACACTGTTTTGTTTTCAACTTGCTATAGTGCTCCTTTTATCTTGCTTA
GTTGATCCTAAAGTTGTAAAGCTTGAGGTTACAGGGATCTATTTATCATA
ATTATTTGGTACTTTTAAAGATCGATGATGTTAATGATTATTTTCAATAA
AAAAATTTTGAATTATTTTTTCAGGATACAACAGATACAGTTACTTGGAA
GGAATCTCAAAAGTGAAGAACACAACTTGCTTTGGAATCAAATCGAATCC
GAAATTCATCTCCACCGACACAAAACTGTCATCAGGGCGTGTCGAGGGCG
ACCAGGCGTGAACAACAAAGTAACATCTAAAGTGCCGCCCAGAGAAGAGA
TTAATGAAGATGACGACGTGGCGAGTGTTCAACGAAAGAAGAGGGGGATA
GGAGAAGCACGGTTGGTGAAAATGCGAAGAGAAAAACACGAGGGGCTTGG
AATCTCCATCACGGTAATTACATAGAGATTGCTTGTTTTCAAGACTGCAA
ATACTTTCTCATTTATAGTNGCTATTACATAGAGATTGCTTGTTTTCAAA
ACTGCAAATGTTTCTTTATTTATAGTCTATACAACAAGTAAGAGTTTAAG
AAAATATTTCTGTGGTGTTAATTTAGAATGGAACCTCGTCCATTTTAAGT
TTCTTTAAGGTGACTTTAAATACTAATTTTTGCTCACCTTCATATGACAA
ATTATCTTATTTTTACTGTTTTCTAGGGTGGTAAAGAGCACGGCGTCCCT
ATTATAATTTCTGAAATACACGAAGACATGCCTGCGCAACGTTGCCAAGA
CCTTTACGTCGGTGACGCAATCCTCTCCGTCAACGCCACTGATCTGAAAG
ATTCGACGCACTCACAAGCGGTTCACGTTTTGTCGCGCGTGCACGGTGAC
ATCACGATGGAAGTGTTGTATGTAGATGTTGATGAGTCAGCAGAAGAGGA
TGATAATTGGGAAGAAGACGCTGAACAAAGGTTAGTTATACTTTTTTCAT
ACCTGATAAAAGGGGAAAACTTAGTTGTGGAAAACTGACGAATTTCGTGG
CAAGTGGAGGTGTTTTCCACGAAAAAATCCTCGGGACATCGTCAAAGGAT
GGTAACACAAACCTTAAAAAAAGTGATAAGGTTTCCCCTGACGGAAAATA
ATTTTCATGTACAATGCACAGTAAATCCCGTGTATTACTTTTTTGATGGT
TTGATTACCTTTTTTCTTTCCCTATCAACAGATACAGTTCGGTTGGCTTG
GTAGACGACCCTTTCACGCTAACCAGCAATGAAAACAACGAAATCGTCAT
GACTAATTCACCTTCAAAATCCAGTATAAAGAAAACAAGGTATTTTATTT
TAGTTTAAAGAATTTATTTCTCCTTAACATGAAACTTGTTTTTTTTATGA
TGCATGTATCTATCAAAAAGTAATCAATCTATATGCTTCCATCGTGATAA
TCAAACAAAAAACCCACTTAAAATCGTAAAACCCTTAAATACGGATAACT
TTCTAACTACTTTAGTCAAATCACTTCAAAACACAAATTTTAACAACTTT
CAAATATGATATGATAATAATGTATGTAAAAGAAGTTAAAATTTTTTCAG
AAATTGAACNCACAACTTTCGAATTACTATAATAATGTATGTAAAATGAG
TTAAAAATTTTTCAGAAATTGAACTCTTGCGCTAAAGTTTGGAACAAACA
TTAAGATCTTTACTTTTCTCTTTCTTTTTTGGACCTTCTACCTTGAGGTC
CTGTAAGTTTTATCCATTCATCCATCCATTCTTTATTATTTTGTTCGTTT
ATTTCTTAGTTTATCTCCTGCTTTTCTCTGAATATTTTCCGTATTTTGTA
TTTTGTGCAAAGAAACAAATTGGTAGTATCTGAAAAAAAATGTCAGAATG
CCGAGGCACCACTTTAAAAAGACTTTCACTACTATACCTTTTCATCACTT
TGATTTTTCATGATTGAACTTGGAATTTTTCTCATTTTTTTTCAGTGCGT
ATACCTACGCAACACCCGCTTTTTCAAAGCTGGATGAAAACGAGTCTGAG
AAAAATCAAGACAAAGAAACCGAGAAAATCACTAGTAATGGTAGTGTGGT
AAGAGACAGTCATTTATTACGGAACTCTTCAACGTCATCCGGTGGTAAAT
ATCCGGGTATGCTAAAACGAGTTGATCCGAGTTGATCCCCACTATCTCTT
CAGAAGCATTTTGGTATCTTGGAATTACTTAGCAATATCTTCGTTCAAAC
AAATACGTTTTGCGATTGACGCTTTTTTTTGGATTCTCTCTCTCCATGTG
ACGCTCTTACAACGAGTTTTAAAACGAAAGTGTTATGGAATGACCGAGTT
AATCCAAGCTGATCCAGACTCCCTTAATCACGTTATTACCGAGTTTATGT
ATGTGTGTTTTTCAGCGACGGAGACGGTAAGGTTCTAATTTGACTAGATC
CTAACTAGCTGAGGACGACGGTAAGTCAGCACTTTTACCGTCCTCGATTT
TGCGGGTCAGAACTGCGGGTTATTCCAAATCGCTTCAGTCACTTTACCGT
CCTCAAAAG Coding sequence (CDS) from alignment at scaffold_166:587305..595213- >TCONS_00049818 ID=TCONS_00049818|Name=TCONS_00049818|organism=Clytia hemisphaerica|type=CDS|length=9975bp|location=Sequence derived from alignment at scaffold_166:587305..595213- (Clytia hemisphaerica)
TGCGTATACCTACGCAACACCCGCTTTTTCAAAGCTGGATGAAAACGAGT
CTGAGAAAAATCAAGACAAAGAAACCGAGAAAATCACTAGTAATGGTAGT
GTGGTAAGAGACAGTCATTTATTACGGAACTCTTCAACGTCATCCGGTGG
TAAATATCCGGGTATGCTAAAACGAGTTGATCCGAGTTGAATACAGTTCG
GTTGGCTTGGTAGACGACCCTTTCACGCTAACCAGCAATGAAAACAACGA
AATCGTCATGACTAATTCACCTTCAAAATCCAGTATAAAGAAAACAAGGG
TGGTAAAGAGCACGGCGTCCCTATTATAATTTCTGAAATACACGAAGACA
TGCCTGCGCAACGTTGCCAAGACCTTTACGTCGGTGACGCAATCCTCTCC
GTCAACGCCACTGATCTGAAAGATTCGACGCACTCACAAGCGGTTCACGT
TTTGTCGCGCGTGCACGGTGACATCACGATGGAAGTGTTGTATGTAGATG
TTGATGAGTCAGCAGAAGAGGATGATAATTGGGAAGAAGACGCTGAACAA
AGGATACAACAGATACAGTTACTTGGAAGGAATCTCAAAAGTGAAGAACA
CAACTTGCTTTGGAATCAAATCGAATCCGAAATTCATCTCCACCGACACA
AAACTGTCATCAGGGCGTGTCGAGGGCGACCAGGCGTGAACAACAAAGTA
ACATCTAAAGTGCCGCCCAGAGAAGAGATTAATGAAGATGACGACGTGGC
GAGTGTTCAACGAAAGAAGAGGGGGATAGGAGAAGCACGGTTGGTGAAAA
TGCGAAGAGAAAAACACGAGGGGCTTGGAATCTCCATCACGGAAAACGAA
TTGACTACATTCCGAAGAGATGCAATGAAAGAAACACAACTGAAAGCTGA
AGTCAACCAGTACCAAAAAGAAAATGATAACCTTCGAAGAGACGTCTTGA
CATTGCAAGGTGAAGTATACGGTGCACGTTTAGCTGCGAAATATCTTGAC
AAAGAACTCGCTGGCAGGCAGAGTTGCTATCACTGAGGACGTCGATGACC
GAATCACAGGCTAAAGTAACAGTGATGGAAAAAGAATTGAAAAATACTTT
ACTTCAGTTACATGCAGTTCAATTGCAACTCCATTCGAATACTAACACAG
AAAATCCTATCGACTCAAACGTGATATTGAATAGATTGAATTTCAGGATA
AAGATTAAAATGTCGTTAGCTGCGCCAATGTTTCGGTGGTTAGATTTACT
GGAGAAAGAATTTGATAAAGCATTTGTGGAATTAGATGTTTTGCTTGGCG
ATATTGATGAAGACCAGTCGGAAATCACTTTTGCTGGACGACAAAAATTG
ACTGCTCTTTCATCAGCCTTTGCTCAGCTGGCACACAAATCACAGACTAT
CTTTCAATCTAATGCTAAATTTGAGTGCGTATACCTACGCAACACCCGCT
TTTTCAAAGCTGGATGAAAACGAGTCTGAGAAAAATCAAGACAAAGAAAC
CGAGAAAATCACTAGTAATGGTAGTGTGGTAAGAGACAGTCATTTATTAC
GGAACTCTTCAACGTCATCCGGTGGTAAATATCCGGGTATGCTAAAACGA
GTTGATCCGAGTTGAATACAGTTCGGTTGGCTTGGTAGACGACCCTTTCA
CGCTAACCAGCAATGAAAACAACGAAATCGTCATGACTAATTCACCTTCA
AAATCCAGTATAAAGAAAACAAGGGTGGTAAAGAGCACGGCGTCCCTATT
ATAATTTCTGAAATACACGAAGACATGCCTGCGCAACGTTGCCAAGACCT
TTACGTCGGTGACGCAATCCTCTCCGTCAACGCCACTGATCTGAAAGATT
CGACGCACTCACAAGCGGTTCACGTTTTGTCGCGCGTGCACGGTGACATC
ACGATGGAAGTGTTGTATGTAGATGTTGATGAGTCAGCAGAAGAGGATGA
TAATTGGGAAGAAGACGCTGAACAAAGGATACAACAGATACAGTTACTTG
GAAGGAATCTCAAAAGTGAAGAACACAACTTGCTTTGGAATCAAATCGAA
TCCGAAATTCATCTCCACCGACACAAAACTGTCATCAGGGCGTGTCGAGG
GCGACCAGGCGTGAACAACAAAGTAACATCTAAAGTGCCGCCCAGAGAAG
AGATTAATGAAGATGACGACGTGGCGAGTGTTCAACGAAAGAAGAGGGGG
ATAGGAGAAGCACGGTTGGTGAAAATGCGAAGAGAAAAACACGAGGGGCT
TGGAATCTCCATCACGGAAAACGAATTGACTACATTCCGAAGAGATGCAA
TGAAAGAAACACAACTGAAAGCTGAAGTCAACCAGTACCAAAAAGAAAAT
GATAACCTTCGAAGAGACGTCTTGACATTGCAAGGTGAAGTATACGGTGC
ACGTTTAGCTGCGAAATATCTTGACAAAGAACTCGCTGGCAGGCAGAGTT
GCTATCACTGAGGACGTCGATGACCGAATCACAGGCTAAAGTAACAGTGA
TGGAAAAAGAATTGAAAAATACTTTACTTCAGTTACATGCAGTTCAATTG
CAACTCCATTCGAATACTAACACAGAAAATCCTATCGACTCAAACGTGAT
ATTGAATAGATTGAATTTCAGGATAAAGATTAAAATGTCGTTAGCTGCGC
CAATGTTTCGGTGGTTAGATTTACTGGAGAAAGAATTTGATAAAGCATTT
GTGGAATTAGATGTTTTGCTTGGCGATATTGATGAAGACCAGTCGGAAAT
CACTTTTGCTGGACGACAAAAATTGACTGCTCTTTCATCAGCCTTTGCTC
AGCTGGCACACAAATCACAGACTATCTTTCAATCTAATGCTAAATTTGAG
TGCGTATACCTACGCAACACCCGCTTTTTCAAAGCTGGATGAAAACGAGT
CTGAGAAAAATCAAGACAAAGAAACCGAGAAAATCACTAGTAATGGTAGT
GTGGTAAGAGACAGTCATTTATTACGGAACTCTTCAACGTCATCCGGTGG
TAAATATCCGGGTATGCTAAAACGAGTTGATCCGAGTTGAATACAGTTCG
GTTGGCTTGGTAGACGACCCTTTCACGCTAACCAGCAATGAAAACAACGA
AATCGTCATGACTAATTCACCTTCAAAATCCAGTATAAAGAAAACAAGGG
TGGTAAAGAGCACGGCGTCCCTATTATAATTTCTGAAATACACGAAGACA
TGCCTGCGCAACGTTGCCAAGACCTTTACGTCGGTGACGCAATCCTCTCC
GTCAACGCCACTGATCTGAAAGATTCGACGCACTCACAAGCGGTTCACGT
TTTGTCGCGCGTGCACGGTGACATCACGATGGAAGTGTTGTATGTAGATG
TTGATGAGTCAGCAGAAGAGGATGATAATTGGGAAGAAGACGCTGAACAA
AGGATACAACAGATACAGTTACTTGGAAGGAATCTCAAAAGTGAAGAACA
CAACTTGCTTTGGAATCAAATCGAATCCGAAATTCATCTCCACCGACACA
AAACTGTCATCAGGGCGTGTCGAGGGCGACCAGGCGTGAACAACAAAGTA
ACATCTAAAGTGCCGCCCAGAGAAGAGATTAATGAAGATGACGACGTGGC
GAGTGTTCAACGAAAGAAGAGGGGGATAGGAGAAGCACGGTTGGTGAAAA
TGCGAAGAGAAAAACACGAGGGGCTTGGAATCTCCATCACGGAAAACGAA
TTGACTACATTCCGAAGAGATGCAATGAAAGAAACACAACTGAAAGCTGA
AGTCAACCAGTACCAAAAAGAAAATGATAACCTTCGAAGAGACGTCTTGA
CATTGCAAGGTGAAGTATACGGTGCACGTTTAGCTGCGAAATATCTTGAC
AAAGAACTCGCTGGCAGGCAGAGTTGCTATCACTGAGGACGTCGATGACC
GAATCACAGGCTAAAGTAACAGTGATGGAAAAAGAATTGAAAAATACTTT
ACTTCAGTTACATGCAGTTCAATTGCAACTCCATTCGAATACTAACACAG
AAAATCCTATCGACTCAAACGTGATATTGAATAGATTGAATTTCAGGATA
AAGATTAAAATGTCGTTAGCTGCGCCAATGTTTCGGTGGTTAGATTTACT
GGAGAAAGAATTTGATAAAGCATTTGTGGAATTAGATGTTTTGCTTGGCG
ATATTGATGAAGACCAGTCGGAAATCACTTTTGCTGGACGACAAAAATTG
ACTGCTCTTTCATCAGCCTTTGCTCAGCTGGCACACAAATCACAGACTAT
CTTTCAATCTAATGCTAAATTTGAGTGCGTATACCTACGCAACACCCGCT
TTTTCAAAGCTGGATGAAAACGAGTCTGAGAAAAATCAAGACAAAGAAAC
CGAGAAAATCACTAGTAATGGTAGTGTGGTAAGAGACAGTCATTTATTAC
GGAACTCTTCAACGTCATCCGGTGGTAAATATCCGGGTATGCTAAAACGA
GTTGATCCGAGTTGAATACAGTTCGGTTGGCTTGGTAGACGACCCTTTCA
CGCTAACCAGCAATGAAAACAACGAAATCGTCATGACTAATTCACCTTCA
AAATCCAGTATAAAGAAAACAAGGGTGGTAAAGAGCACGGCGTCCCTATT
ATAATTTCTGAAATACACGAAGACATGCCTGCGCAACGTTGCCAAGACCT
TTACGTCGGTGACGCAATCCTCTCCGTCAACGCCACTGATCTGAAAGATT
CGACGCACTCACAAGCGGTTCACGTTTTGTCGCGCGTGCACGGTGACATC
ACGATGGAAGTGTTGTATGTAGATGTTGATGAGTCAGCAGAAGAGGATGA
TAATTGGGAAGAAGACGCTGAACAAAGGATACAACAGATACAGTTACTTG
GAAGGAATCTCAAAAGTGAAGAACACAACTTGCTTTGGAATCAAATCGAA
TCCGAAATTCATCTCCACCGACACAAAACTGTCATCAGGGCGTGTCGAGG
GCGACCAGGCGTGAACAACAAAGTAACATCTAAAGTGCCGCCCAGAGAAG
AGATTAATGAAGATGACGACGTGGCGAGTGTTCAACGAAAGAAGAGGGGG
ATAGGAGAAGCACGGTTGGTGAAAATGCGAAGAGAAAAACACGAGGGGCT
TGGAATCTCCATCACGGAAAACGAATTGACTACATTCCGAAGAGATGCAA
TGAAAGAAACACAACTGAAAGCTGAAGTCAACCAGTACCAAAAAGAAAAT
GATAACCTTCGAAGAGACGTCTTGACATTGCAAGGTGAAGTATACGGTGC
ACGTTTAGCTGCGAAATATCTTGACAAAGAACTCGCTGGCAGGCAGAGTT
GCTATCACTGAGGACGTCGATGACCGAATCACAGGCTAAAGTAACAGTGA
TGGAAAAAGAATTGAAAAATACTTTACTTCAGTTACATGCAGTTCAATTG
CAACTCCATTCGAATACTAACACAGAAAATCCTATCGACTCAAACGTGAT
ATTGAATAGATTGAATTTCAGGATAAAGATTAAAATGTCGTTAGCTGCGC
CAATGTTTCGGTGGTTAGATTTACTGGAGAAAGAATTTGATAAAGCATTT
GTGGAATTAGATGTTTTGCTTGGCGATATTGATGAAGACCAGTCGGAAAT
CACTTTTGCTGGACGACAAAAATTGACTGCTCTTTCATCAGCCTTTGCTC
AGCTGGCACACAAATCACAGACTATCTTTCAATCTAATGCTAAATTTGAG
TGCGTATACCTACGCAACACCCGCTTTTTCAAAGCTGGATGAAAACGAGT
CTGAGAAAAATCAAGACAAAGAAACCGAGAAAATCACTAGTAATGGTAGT
GTGGTAAGAGACAGTCATTTATTACGGAACTCTTCAACGTCATCCGGTGG
TAAATATCCGGGTATGCTAAAACGAGTTGATCCGAGTTGAATACAGTTCG
GTTGGCTTGGTAGACGACCCTTTCACGCTAACCAGCAATGAAAACAACGA
AATCGTCATGACTAATTCACCTTCAAAATCCAGTATAAAGAAAACAAGGG
TGGTAAAGAGCACGGCGTCCCTATTATAATTTCTGAAATACACGAAGACA
TGCCTGCGCAACGTTGCCAAGACCTTTACGTCGGTGACGCAATCCTCTCC
GTCAACGCCACTGATCTGAAAGATTCGACGCACTCACAAGCGGTTCACGT
TTTGTCGCGCGTGCACGGTGACATCACGATGGAAGTGTTGTATGTAGATG
TTGATGAGTCAGCAGAAGAGGATGATAATTGGGAAGAAGACGCTGAACAA
AGGATACAACAGATACAGTTACTTGGAAGGAATCTCAAAAGTGAAGAACA
CAACTTGCTTTGGAATCAAATCGAATCCGAAATTCATCTCCACCGACACA
AAACTGTCATCAGGGCGTGTCGAGGGCGACCAGGCGTGAACAACAAAGTA
ACATCTAAAGTGCCGCCCAGAGAAGAGATTAATGAAGATGACGACGTGGC
GAGTGTTCAACGAAAGAAGAGGGGGATAGGAGAAGCACGGTTGGTGAAAA
TGCGAAGAGAAAAACACGAGGGGCTTGGAATCTCCATCACGGAAAACGAA
TTGACTACATTCCGAAGAGATGCAATGAAAGAAACACAACTGAAAGCTGA
AGTCAACCAGTACCAAAAAGAAAATGATAACCTTCGAAGAGACGTCTTGA
CATTGCAAGGTGAAGTATACGGTGCACGTTTAGCTGCGAAATATCTTGAC
AAAGAACTCGCTGGCAGGCAGAGTTGCTATCACTGAGGACGTCGATGACC
GAATCACAGGCTAAAGTAACAGTGATGGAAAAAGAATTGAAAAATACTTT
ACTTCAGTTACATGCAGTTCAATTGCAACTCCATTCGAATACTAACACAG
AAAATCCTATCGACTCAAACGTGATATTGAATAGATTGAATTTCAGGATA
AAGATTAAAATGTCGTTAGCTGCGCCAATGTTTCGGTGGTTAGATTTACT
GGAGAAAGAATTTGATAAAGCATTTGTGGAATTAGATGTTTTGCTTGGCG
ATATTGATGAAGACCAGTCGGAAATCACTTTTGCTGGACGACAAAAATTG
ACTGCTCTTTCATCAGCCTTTGCTCAGCTGGCACACAAATCACAGACTAT
CTTTCAATCTAATGCTAAATTTGAGTGCGTATACCTACGCAACACCCGCT
TTTTCAAAGCTGGATGAAAACGAGTCTGAGAAAAATCAAGACAAAGAAAC
CGAGAAAATCACTAGTAATGGTAGTGTGGTAAGAGACAGTCATTTATTAC
GGAACTCTTCAACGTCATCCGGTGGTAAATATCCGGGTATGCTAAAACGA
GTTGATCCGAGTTGAATACAGTTCGGTTGGCTTGGTAGACGACCCTTTCA
CGCTAACCAGCAATGAAAACAACGAAATCGTCATGACTAATTCACCTTCA
AAATCCAGTATAAAGAAAACAAGGGTGGTAAAGAGCACGGCGTCCCTATT
ATAATTTCTGAAATACACGAAGACATGCCTGCGCAACGTTGCCAAGACCT
TTACGTCGGTGACGCAATCCTCTCCGTCAACGCCACTGATCTGAAAGATT
CGACGCACTCACAAGCGGTTCACGTTTTGTCGCGCGTGCACGGTGACATC
ACGATGGAAGTGTTGTATGTAGATGTTGATGAGTCAGCAGAAGAGGATGA
TAATTGGGAAGAAGACGCTGAACAAAGGATACAACAGATACAGTTACTTG
GAAGGAATCTCAAAAGTGAAGAACACAACTTGCTTTGGAATCAAATCGAA
TCCGAAATTCATCTCCACCGACACAAAACTGTCATCAGGGCGTGTCGAGG
GCGACCAGGCGTGAACAACAAAGTAACATCTAAAGTGCCGCCCAGAGAAG
AGATTAATGAAGATGACGACGTGGCGAGTGTTCAACGAAAGAAGAGGGGG
ATAGGAGAAGCACGGTTGGTGAAAATGCGAAGAGAAAAACACGAGGGGCT
TGGAATCTCCATCACGGAAAACGAATTGACTACATTCCGAAGAGATGCAA
TGAAAGAAACACAACTGAAAGCTGAAGTCAACCAGTACCAAAAAGAAAAT
GATAACCTTCGAAGAGACGTCTTGACATTGCAAGGTGAAGTATACGGTGC
ACGTTTAGCTGCGAAATATCTTGACAAAGAACTCGCTGGCAGGCAGAGTT
GCTATCACTGAGGACGTCGATGACCGAATCACAGGCTAAAGTAACAGTGA
TGGAAAAAGAATTGAAAAATACTTTACTTCAGTTACATGCAGTTCAATTG
CAACTCCATTCGAATACTAACACAGAAAATCCTATCGACTCAAACGTGAT
ATTGAATAGATTGAATTTCAGGATAAAGATTAAAATGTCGTTAGCTGCGC
CAATGTTTCGGTGGTTAGATTTACTGGAGAAAGAATTTGATAAAGCATTT
GTGGAATTAGATGTTTTGCTTGGCGATATTGATGAAGACCAGTCGGAAAT
CACTTTTGCTGGACGACAAAAATTGACTGCTCTTTCATCAGCCTTTGCTC
AGCTGGCACACAAATCACAGACTATCTTTCAATCTAATGCTAAATTTGAG
TGCGTATACCTACGCAACACCCGCTTTTTCAAAGCTGGATGAAAACGAGT
CTGAGAAAAATCAAGACAAAGAAACCGAGAAAATCACTAGTAATGGTAGT
GTGGTAAGAGACAGTCATTTATTACGGAACTCTTCAACGTCATCCGGTGG
TAAATATCCGGGTATGCTAAAACGAGTTGATCCGAGTTGAATACAGTTCG
GTTGGCTTGGTAGACGACCCTTTCACGCTAACCAGCAATGAAAACAACGA
AATCGTCATGACTAATTCACCTTCAAAATCCAGTATAAAGAAAACAAGGG
TGGTAAAGAGCACGGCGTCCCTATTATAATTTCTGAAATACACGAAGACA
TGCCTGCGCAACGTTGCCAAGACCTTTACGTCGGTGACGCAATCCTCTCC
GTCAACGCCACTGATCTGAAAGATTCGACGCACTCACAAGCGGTTCACGT
TTTGTCGCGCGTGCACGGTGACATCACGATGGAAGTGTTGTATGTAGATG
TTGATGAGTCAGCAGAAGAGGATGATAATTGGGAAGAAGACGCTGAACAA
AGGATACAACAGATACAGTTACTTGGAAGGAATCTCAAAAGTGAAGAACA
CAACTTGCTTTGGAATCAAATCGAATCCGAAATTCATCTCCACCGACACA
AAACTGTCATCAGGGCGTGTCGAGGGCGACCAGGCGTGAACAACAAAGTA
ACATCTAAAGTGCCGCCCAGAGAAGAGATTAATGAAGATGACGACGTGGC
GAGTGTTCAACGAAAGAAGAGGGGGATAGGAGAAGCACGGTTGGTGAAAA
TGCGAAGAGAAAAACACGAGGGGCTTGGAATCTCCATCACGGAAAACGAA
TTGACTACATTCCGAAGAGATGCAATGAAAGAAACACAACTGAAAGCTGA
AGTCAACCAGTACCAAAAAGAAAATGATAACCTTCGAAGAGACGTCTTGA
CATTGCAAGGTGAAGTATACGGTGCACGTTTAGCTGCGAAATATCTTGAC
AAAGAACTCGCTGGCAGGCAGAGTTGCTATCACTGAGGACGTCGATGACC
GAATCACAGGCTAAAGTAACAGTGATGGAAAAAGAATTGAAAAATACTTT
ACTTCAGTTACATGCAGTTCAATTGCAACTCCATTCGAATACTAACACAG
AAAATCCTATCGACTCAAACGTGATATTGAATAGATTGAATTTCAGGATA
AAGATTAAAATGTCGTTAGCTGCGCCAATGTTTCGGTGGTTAGATTTACT
GGAGAAAGAATTTGATAAAGCATTTGTGGAATTAGATGTTTTGCTTGGCG
ATATTGATGAAGACCAGTCGGAAATCACTTTTGCTGGACGACAAAAATTG
ACTGCTCTTTCATCAGCCTTTGCTCAGCTGGCACACAAATCACAGACTAT
CTTTCAATCTAATGCTAAATTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049818-exon-scaffold_166-1575043694:594977..595213 | TCONS_00049818-exon-scaffold_166-1575043694:594977..595213 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1575043694:591234..591404 | TCONS_00049818-exon-scaffold_166-1575043694:591234..591404 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1575043694:590123..590298 | TCONS_00049818-exon-scaffold_166-1575043694:590123..590298 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1575043694:589401..589689 | TCONS_00049818-exon-scaffold_166-1575043694:589401..589689 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1575043694:588884..589137 | TCONS_00049818-exon-scaffold_166-1575043694:588884..589137 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1575043694:588525..588632 | TCONS_00049818-exon-scaffold_166-1575043694:588525..588632 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1575043694:587305..587868 | TCONS_00049818-exon-scaffold_166-1575043694:587305..587868 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1510915933:594977..595213 | TCONS_00049818-exon-scaffold_166-1510915933:594977..595213 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1510915933:591234..591404 | TCONS_00049818-exon-scaffold_166-1510915933:591234..591404 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1510915933:590123..590298 | TCONS_00049818-exon-scaffold_166-1510915933:590123..590298 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1510915933:589401..589689 | TCONS_00049818-exon-scaffold_166-1510915933:589401..589689 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1510915933:588884..589137 | TCONS_00049818-exon-scaffold_166-1510915933:588884..589137 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1510915933:588525..588632 | TCONS_00049818-exon-scaffold_166-1510915933:588525..588632 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1510915933:587305..587868 | TCONS_00049818-exon-scaffold_166-1510915933:587305..587868 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1491911889:594977..595213 | TCONS_00049818-exon-scaffold_166-1491911889:594977..595213 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1491911889:591234..591404 | TCONS_00049818-exon-scaffold_166-1491911889:591234..591404 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1491911889:590123..590298 | TCONS_00049818-exon-scaffold_166-1491911889:590123..590298 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1491911889:589401..589689 | TCONS_00049818-exon-scaffold_166-1491911889:589401..589689 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1491911889:588884..589137 | TCONS_00049818-exon-scaffold_166-1491911889:588884..589137 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1491911889:588525..588632 | TCONS_00049818-exon-scaffold_166-1491911889:588525..588632 | Clytia hemisphaerica | exon |
| TCONS_00049818-exon-scaffold_166-1491911889:587305..587868 | TCONS_00049818-exon-scaffold_166-1491911889:587305..587868 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_166 | supercontig | scaffold_166:587305..595213 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001478 | PDZ |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00049818 vs. Swiss-Prot (Human)
Match: GOPC (Golgi-associated PDZ and coiled-coil motif-containing protein OS=Homo sapiens GN=GOPC PE=1 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 1.051e-122 Identity = 203/362 (56.08%), Postives = 263/362 (72.65%), Query Frame = 1
Query: 22 MSLAAP----MFRWLDLLEKEFDKAFVELDVLLGDIDEDQSEITFAGRQKLTALSSAFAQLAHKSQTIFQSNAKFEAELLSLRTSMTESQAKVTVMEKELKNTXXXXXXXXXXXXSNTNTENPIDSNVI--------LNRLENELTTFRRDAMKETQLKAEVNQYQKENDNLRRDVLTLQGEVYGARLAAKYLDKELAGRIQQIQLLGRNLKSEEHNLLWNQIESEIHLHRHKTVIRACRGRPGVNNKVTSKVPPREEINEDDDVASVQRKKRGIGEARLVKMRREKHEGLGISITGGKEHGVPIIISEIHEDMPAQRCQDLYVGDAILSVNATDLKDSTHSQAVHVLSRVHGDITMEVLYV 1071
S+ AP MFRWL++LEKEFDKAFV++D+LLG+ID DQ++IT+ GRQK+T+LSS FAQL HK+Q++ Q N K EA+L+ L++ +TE+QA+ V+EKE+ + LLQLH++QLQLH+ T DS I + LE EL +++ MKE QL+AEV +KEN+ LRR + LQ EVYGARLAAKYLDKELAGR+QQIQLLGR++K H+ LWNQ+E+EIHLHRHKTVIRACRGR + K + PP D D +K +G+G R V + +E HEGLGISITGGKEHGVPI+ISEIH PA RC L+VGDAIL+VN +L+D+ H +AV +LS+ G+I EV+YV
Sbjct: 20 CSVGAPGGVSMFRWLEVLEKEFDKAFVDVDLLLGEIDPDQADITYEGRQKMTSLSSCFAQLCHKAQSVSQINHKLEAQLVDLKSELTETQAEKVVLEKEVHDQLLQLHSIQLQLHAKTG--QSADSGTIKAKLSGPSVEELERELEANKKEKMKEAQLEAEVKLLRKENEALRRHIAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPAHDKLWNQLEAEIHLHRHKTVIRACRGRNDL--KRPMQAPP----GHDQDSL---KKSQGVGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYV 370
The following BLAST results are available for this feature:
|
