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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050032 ID=TCONS_00050032|Name=TCONS_00050032|organism=Clytia hemisphaerica|type=transcript|length=1227bp
TTGGCGAAAGCAAAACATTTGAAGGATGGTGACAAAGGCGACCATGATAT
TTGTGTGGTAATTGGTGTTGCAGTAATGGATACGTTGCATTTGATTGTCA
TCTAACCAAGAATCGATCGCTGGTGATTGTTGAATGAAAGTGGTGATCGC
AATTCCATTGGCAATTATTGGGAACAAAATGATAGTGAAAGCTTGGACGG
CCGATGTCTGACGAATCTGACTCCTCGATATACGGAAAAGGGCTTGAAAA
GCTGACATCAACTTTTGTGATTTTGTATATATGAAACCAACGTTGGTGAC
ATATAAAACGCTTAGAATGAGATTGGATGAGATGCATTTGATAATGGTTA
CATTCTCACTTAAATTTAGATACATGATGGTGATGATGGTCAATTCAATG
CTGGACAAATGCAATGTGGATACGGTTATATCACTGGATCGAACAGTTGG
GGTGTCTCTTTTCCATACGAAAATCACAAACGCCACAGAAGTGatgaaca
aacaaaaaacaccaGATATCAGTATCAGGTAGAATTGAAGATCGCTGAAA
GAAAAATCCACGTTGGTATATCGATCGATACAAGCTGTTCTTTTACCGTC
ATCTATGGTGAATGGTTCAACATTGCAAGCGATACACAATCCATCACCAT
AACCTGCTTTGAAATGGTTGACTGGACAAAGCACACATTTGAATTCTATT
CTCAAGTCGAAAATCTCACTCGTTTCCCGTTCTGTGTATACTTTATGGAA
CCCTGGTAAGCAATGTGTTTTAGAGCAGTTCGTTGGAAGCCAATAGTCTG
TCTCCTCTAAGAATTTCTTTGACTGCTTGACTTTGATGTCATATAAATGG
CGTAATACTGGACCTAACGGCTCTTCCATATAAAAAGGTATAACGTAGGA
ATATCCATACAAAGCCTCCATATCCTTCAAACCTGCGCTTAGAGCCGGCA
CAGGACTCATATCATAACGATAATTCGATACATAATTTTTCAAGTCACCG
AGAACGTTAACATAGCCGTATGGTTTTTTGATTGGCTGTTGTCGTATATA
AAGCCATTGGATAAACTCTGATGGAGTGAAGATTGGTGTCTCAAACTCCC
TTAAGCTGTGAGGGAAATGTACGATCATTGTCGTTTCTTTGTAATTATGA
CGTAAGAAATCTTCCATAGTATTTATTAAATAATGACCATGCTCCTCTTG
CACAAATATGACAACAGCAGAAGTCCG Run BLAST on NCBI transcript from alignment at scaffold_167:330703..331929- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050032 ID=TCONS_00050032|Name=TCONS_00050032|organism=Clytia hemisphaerica|type=transcript|length=1227bp|location=Sequence derived from alignment at scaffold_167:330703..331929- (Clytia hemisphaerica)
TTGGCGAAAGCAAAACATTTGAAGGATGGTGACAAAGGCGACCATGATAT
TTGTGTGGTAATTGGTGTTGCAGTAATGGATACGTTGCATTTGATTGTCA
TCTAACCAAGAATCGATCGCTGGTGATTGTTGAATGAAAGTGGTGATCGC
AATTCCATTGGCAATTATTGGGAACAAAATGATAGTGAAAGCTTGGACGG
CCGATGTCTGACGAATCTGACTCCTCGATATACGGAAAAGGGCTTGAAAA
GCTGACATCAACTTTTGTGATTTTGTATATATGAAACCAACGTTGGTGAC
ATATAAAACGCTTAGAATGAGATTGGATGAGATGCATTTGATAATGGTTA
CATTCTCACTTAAATTTAGATACATGATGGTGATGATGGTCAATTCAATG
CTGGACAAATGCAATGTGGATACGGTTATATCACTGGATCGAACAGTTGG
GGTGTCTCTTTTCCATACGAAAATCACAAACGCCACAGAAGTGATGAACA
AACAAAAAACACCAGATATCAGTATCAGGTAGAATTGAAGATCGCTGAAA
GAAAAATCCACGTTGGTATATCGATCGATACAAGCTGTTCTTTTACCGTC
ATCTATGGTGAATGGTTCAACATTGCAAGCGATACACAATCCATCACCAT
AACCTGCTTTGAAATGGTTGACTGGACAAAGCACACATTTGAATTCTATT
CTCAAGTCGAAAATCTCACTCGTTTCCCGTTCTGTGTATACTTTATGGAA
CCCTGGTAAGCAATGTGTTTTAGAGCAGTTCGTTGGAAGCCAATAGTCTG
TCTCCTCTAAGAATTTCTTTGACTGCTTGACTTTGATGTCATATAAATGG
CGTAATACTGGACCTAACGGCTCTTCCATATAAAAAGGTATAACGTAGGA
ATATCCATACAAAGCCTCCATATCCTTCAAACCTGCGCTTAGAGCCGGCA
CAGGACTCATATCATAACGATAATTCGATACATAATTTTTCAAGTCACCG
AGAACGTTAACATAGCCGTATGGTTTTTTGATTGGCTGTTGTCGTATATA
AAGCCATTGGATAAACTCTGATGGAGTGAAGATTGGTGTCTCAAACTCCC
TTAAGCTGTGAGGGAAATGTACGATCATTGTCGTTTCTTTGTAATTATGA
CGTAAGAAATCTTCCATAGTATTTATTAAATAATGACCATGCTCCTCTTG
CACAAATATGACAACAGCAGAAGTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050032-exon-scaffold_167-1575043694:330703..331929 | TCONS_00050032-exon-scaffold_167-1575043694:330703..331929 | Clytia hemisphaerica | exon |
| TCONS_00050032-exon-scaffold_167-1510915933:330703..331929 | TCONS_00050032-exon-scaffold_167-1510915933:330703..331929 | Clytia hemisphaerica | exon |
| TCONS_00050032-exon-scaffold_167-1491911889:330703..331929 | TCONS_00050032-exon-scaffold_167-1491911889:330703..331929 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:330703..331929 - |
Blast
The following BLAST results are available for this feature:
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