TCONS_00050037 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050037
Unique NameTCONS_00050037
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1760

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050037 ID=TCONS_00050037|Name=TCONS_00050037|organism=Clytia hemisphaerica|type=transcript|length=1760bp
cttagaataaactgaaaaatgattgaaaatgaTGATGGTGATGATTATAT
GTCATCTGATGACGAAGACTTTTCGTATCCTAGTGATATCTGGAAAAGTT
TTccccagaaaaaaattaaaagtacaACTTTGAAAAGTTTGCATAACATA
GCTCTGggaaatatttgtaaaaatatgGGATATTGGATGGAATTTTTGCC
AACAGACCCTCATAAATTTCTTTATGTTATTAGCCCATTCGATGTTTTAA
GCTCCAAAGATACCATGGCAATACTTTCAATGCTCACAGAGATGCACAAA
TTTAAGCCATGTTATTTGAACTTGATTTTCCATCAACACCTGCTAGAGAT
GGACTTTGATATTTTGCCAAATGGTTGGAATTACATGAAATCAATGTTCA
ATAGATGCAAGAGAATCAAGAGGCTGAAAGtaacaaattcaaaaatatcc
AAAGAGCTTATCAAAAGAATTCCAACATCATATCCCGGTATTGAAGAACT
CAATTTGGGAGGTCCCCATCAAGACCTTAtcgataatttgaaaaattgtt
gtAAATTAAAGTCACTTCATTTTACTGCCAGTTCATTATCTGTTTTGAAG
ATAACATTTCCACCAGAGATACAATCCCTCACAATGAAACATTTAGCTGG
TGATGCGAATGATTCAGACCATCTTTGGAGTATCTTAAATGAATTAAAGT
CATTATCCAGGCTATCTCTCCATGGATCTGAGTTACATTTTTCCACTCTT
CCAGATGATATCAAATTCCCAAACGTCAAAGCGTTGGATCTCTCAAATTG
CACAGGTTTAACAAACCAAAATCTAATTTCCATATTGGAGGCTGTAATCA
ATATCGCTGACCTAAATTTGAATGGACTGTCCTGTGATGATACAAAGATT
TTTAATTCTATTGAAAAACTACCaaatttgttgattttaaaaattgcttA
TTTGTTTGTGGTTTTTGACAATAATGtcaaattttgcttgaaaacaatag
gaAGTCAACTGGTTACTTTGGATATATCTGGGAATCTAGCTATAGACATT
GATTTCATTAGAATGCACTGTCCAAATTTAGAAAGCCTCTTATTGTCACA
ATGTACTTTTTTGAATCCTGATTTCTTTGAACAAAGAATTATCGAAGATC
AATTAAGTCAATATTCTTGTACGAAACTCAAGAAGTTTGAGCTAGATTCT
GTCTCTCTGGATATAATCACTGACAATACTAGTAATATTGAACCAATCAT
AGGAGATGGTGAATTCAATTCGAGAATATTCGATACTCTTTGTCAGACAG
TGTATAAACATTTCATGTCAAAAAGTCTtataaaatcacttaaaattgGC
CATGGAGCTTTTGTTGattatattttaaaacattttgaagGTACTTTATT
AGAATATATCGATTTCTCTGGATGTCGAGGCTTAAAGAAGGAACATATCG
TTAAGTGTTTATTGAAATTCccaaatttaaaacaaattgaTTATTTTGGT
TGCAAGATTTTACAATCAGAAAGGAGCTACTTAAATGGACTAATCTTCAG
AGCTGGTATTGATGTGAAGTGTGAAGGAGACTTTAAGTTTTCTTAATTAA
TTGTTAAAAGATtgtaaatgaaattttataaaGTTACTATATTGGCTCTC
TTTTTtgataacaataataataaattAAGCATAAGAGTGATAAAAACTAT
AGAATAATTCAAAGAGAAACAATTACccgattcttttttttcttctgtgc
CCGAAAAGAT
Run BLAST on NCBI

protein sequence of TCONS_00050037-protein

>TCONS_00050037-protein ID=TCONS_00050037-protein|Name=TCONS_00050037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=525bp
MIENDDGDDYMSSDDEDFSYPSDIWKSFPQKKIKSTTLKSLHNIALGNIC
KNMGYWMEFLPTDPHKFLYVISPFDVLSSKDTMAILSMLTEMHKFKPCYL
NLIFHQHLLEMDFDILPNGWNYMKSMFNRCKRIKRLKVTNSKISKELIKR
IPTSYPGIEELNLGGPHQDLIDNLKNCCKLKSLHFTASSLSVLKITFPPE
IQSLTMKHLAGDANDSDHLWSILNELKSLSRLSLHGSELHFSTLPDDIKF
PNVKALDLSNCTGLTNQNLISILEAVINIADLNLNGLSCDDTKIFNSIEK
LPNLLILKIAYLFVVFDNNVKFCLKTIGSQLVTLDISGNLAIDIDFIRMH
CPNLESLLLSQCTFLNPDFFEQRIIEDQLSQYSCTKLKKFELDSVSLDII
TDNTSNIEPIIGDGEFNSRIFDTLCQTVYKHFMSKSLIKSLKIGHGAFVD
YILKHFEGTLLEYIDFSGCRGLKKEHIVKCLLKFPNLKQIDYFGCKILQS
ERSYLNGLIFRAGIDVKCEGDFKFS
Run BLAST on NCBI

transcript from alignment at scaffold_167:373705..379245-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050037 ID=TCONS_00050037|Name=TCONS_00050037|organism=Clytia hemisphaerica|type=transcript|length=5541bp|location=Sequence derived from alignment at scaffold_167:373705..379245- (Clytia hemisphaerica)
CTTAGAATAAACTGAAAAATGATTGAAAATGATGATGGTGATGATTATAT GTCATCTGATGACGAAGACTTTTCGTATCCTAGTGATATCTGGAAAAGTT TTCCCCAGAAAAAAATTAAAAGTACAACTTTGAAAAGTTTGCATAACATA GCTCTGGGAAATATTTGTAAAAATATGGGATATTGGATGGAATTTTTGCC AACAGACCCTCATAAATTTCTTTATGTTATTAGCCCATTCGATGTTTTAA GTAAGTATCACTTTTCCATAATGATAAATTTAGATATCATTTTTTAAACA TTTTATATTCAAAAACTTGAGTAAACTTCTTGCTAGACTTGATTGGAGAC TTGATTATTCATTAGATAATTTATAAATACTTCTTTTCATTAAATCTCTT TGATAAAAGGCTCCAAAGATACCATGGCAATACTTTCAATGCTCACAGAG ATGCACAAATTTAAGCCATGTTATTTGAACTTGATTTTCCATCAACACCT GCTAGAGATGGACTTTGATATTTTGCCAAATGGTTGGAATTACATGAAAT CAATGTTCAATAGATGCAAGGTAAATTTATTAGAATTATTAAACCTTTTT TGTTTATTTTCGTAAAGCTAAGACCAGTTTTGTCTATATACACACATTTT GTTCTATTGAGCATCTGTCAAAACTTTCAAATATCAGATTTAAAGCTTTG TACTGTTTTTTATTGTGCCTAACATTATATTTTTTCAATTGCTATGATTT TCATAATAAAGATAGAATCAAAAACTAAAAATCGTACCATATTTTTATTT CAGAGAATCAAGAGGCTGAAAGTAACAAATTCAAAAATATCCAAAGAGCT TATCAAAAGAATTCCAACATCATATCCCGGTATTGAAGAACTCAATTTGG GAGGTCCCCATCAAGACCTTATCGATAATTTGAAAAATTGTTGTAAATTA AAGTCACTTCATTTTACTGCCAGTTCATTATCTGTTTTGAAGATAACATT TCCACCAGAGATACAATCCCTCACAATGAAACATTTAGCTGGTGATGCGA ATGATTCAGACCATCTTTGGAGTATCTTAAATGAATTAAAGTCATTATCC AGGCTATCTCTCCATGGATCTGAGTTACATTTTTCCACTCTTCCAGATGA TATCAAATTCCCAAACGTCAAAGCGTTGGATCTCTCAAATTGCACAGGTT TAACAAACCAAAATCTAATTTCCATATTGGAGGCTGTAATCAATATCGCT GACCTAAATTTGAATGGACTGTCCTGTGATGATACAAAGATTTTTAATTC TATTGAAAAACTACCAAATTTGTTGATTTTAAAAATTGCTTATTTGTTTG TGGTTTTTGACAATAATGTCAAATTTTGCTTGAAAACAATAGGAAGTCAA CTGGTTACTTTGGATATATCTGGGAATCTAGCTATAGACATTGATTTCAT TAGAATGCACTGTCCAAATTTAGAAAGCCTCTTATTGTCACAATGTACTT TTTTGAATCCTGATTTCTTTGAACAAAGAATTATCGAAGATCAATTAAGT CAATATTCTTGTACGAAACTCAAGAAGTTTGAGCTAGATTCTGTCTCTCT GGATATAATCACTGACAATACTAGTAATATTGAACCAATCATAGGAGATG GTGAATTCAATTCGAGAATATTCGATACTCTTTGTCAGACAGTGTATAAA CATTTCATGTCAAAAAGTCTTATAAAATCACTTAAAATTGGCCATGGAGC TTTTGTTGATTATATTTTAAAACATTTTGAAGGTACTTTATTAGAATATA TCGATTTCTCTGGATGTCGAGGCTTAAAGAAGGAACATATCGTTAAGTGT TTATTGAAATTCCCAAATTTAAAACAAATTGATTATTTTGGTTGCAAGAT TTTACAATCAGAAAGGAGCTACTTAAATGGACTAATCTTCAGAGCTGGTA TTGATGTGAAGTGTGAAGGAGACTTTAAGTTTTCTTAATTAATTGTTAAA AGATTGTAAATGAAATTTTATAAAGTTACTATATTGGCTCTCTTTTTTGA TAACAATAATAATAAATTAAGCATAAGTATGGAACGCCATAGCTGCCATA AGACGTCTTTTTTTATGAGCTCTTTTTTTATGAGCTCTTTTGAAGACCTC TTTTGAAGACCTCTTTTTTGATGAGCTCTTTTGAAGACCTCTTNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTAATAAT GGAACAGTAAAATTTCTATCCACATAGGGGGCCCCCACATAGCGATTTTA CTAGAAATTCTTATCCCTGCGGTGGGAAAAATTTGCACCTGGGCTGTGAG ACAATATTGTTTTCTTTAAGAAAATGTTTGATGACTTGTCAATTCCCCAG CTTTGCACACATTACTTCAATGTCTATGTAAAATTATATTGTACGTTGAA TCAACGTTACGGATGGGATAGTCTAAAGTTTTGTGACGAACAAATCAGAT AAATAAATCCAGAAAAAGATTTGCGTTTTACCGTTAGATTTAAAGGACGA GTCCCGGTTTTGGCGTAGAGTTCCAGTCTCATTTTCCAAAGTCCGGATAC CCCCTAAAAAGAGGTCTTCAAAAGAGCTCATAAAAAAAGAGGTCATAAAA AAGTGGTCTTCAAAAGAGCTCATAAAAAAAGAGGTCATAAAAAAAGTGGT CTTCAAAAGAGCTCTTAAAAAAAGAGGTCATAAAAAAGAGGTCATAAAAA AAGAGGTCTTCAAAAGAGGTCATAAAAAAAGAGGTCTTCAAAAGAGGTCT TCAAAAGAGGTCATAAAAAAAGAGGTCTTCAAAAGAGCTCATAAAAAAAG AGGTCTTCAAAAGAGGTCATAAAAAAAGAGGTCATAAAAAAAGAGGTCTT CAAAAGAGGTCTTCAAAAGAGGTCATAAANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNAGGTCTTCAAAAGAGGTCTTCAAAAGAGCTCATAAAAA AGAGGTCTTCAAAAGAGGTCTTCAAAAGAGCTCATCAAAAAAGAGGTCTT CAAAAGAGGTCTTCGAAAGAGCTCATCAAAAAAGAGGTCTTCAAAAGAGG TCTTCAAAAGAGCTCATCAAAAAAGAGGTCTTCAAAAGAGGTCTTCAAAA GAGCTCATAAAAAAAGAGCTCATAAAAAAAGACGTCTTATGGCAGCTATG GCGTTCCATACATAAGAGTGATAAAAACTATAGAATAATTCAAAGAGAAA CAATTACCCGATTCTTTTTTTTCTTCTGTGCCCGAAAAGAT

Coding sequence (CDS) from alignment at scaffold_167:373705..379245-

>TCONS_00050037 ID=TCONS_00050037|Name=TCONS_00050037|organism=Clytia hemisphaerica|type=CDS|length=4734bp|location=Sequence derived from alignment at scaffold_167:373705..379245- (Clytia hemisphaerica)
AGAATCAAGAGGCTGAAAGTAACAAATTCAAAAATATCCAAAGAGCTTAT
CAAAAGAATTCCAACATCATATCCCGGTATTGAAGAACTCAATTTGGGAG
GTCCCCATCAAGACCTTATCGATAATTTGAAAAATTGTTGTAAATTAAAG
TCACTTCATTTTACTGCCAGTTCATTATCTGTTTTGAAGATAACATTTCC
ACCAGAGATACAATCCCTCACAATGAAACATTTAGCTGGTGATGCGAATG
ATTCAGACCATCTTTGGAGTATCTTAAATGAATTAAAGTCATTATCCAGG
CTATCTCTCCATGGATCTGAGTTACATTTTTCCACTCTTCCAGATGATAT
CAAATTCCCAAACGTCAAAGCGTTGGATCTCTCAAATTGCACAGGTTTAA
CAAACCAAAATCTAATTTCCATATTGGAGGCTGTAATCAATATCGCTGAC
CTAAATTTGAATGGACTGTCCTGTGATGATACAAAGATTTTTAATTCTAT
TGAAAAACTACCAAATTTGTTGATTTTAAAAATTGCTTATTTGTTTGTGG
TTTTTGACAATAATGTCAAATTTTGCTTGAAAACAATAGGAAGTCAACTG
GTTACTTTGGATATATCTGGGAATCTAGCTATAGACATTGATTTCATTAG
AATGCACTGTCCAAATTTAGAAAGCCTCTTATTGTCACAATGTACTTTTT
TGAATCCTGATTTCTTTGAACAAAGAATTATCGAAGATCAATTAAGTCAA
TATTCTTGTACGAAACTCAAGAAGTTTGAGCTAGATTCTGTCTCTCTGGA
TATAATCACTGACAATACTAGTAATATTGAACCAATCATAGGAGATGGTG
AATTCAATTCGAGAATATTCGATACTCTTTGTCAGACAGTGTATAAACAT
TTCATGTCAAAAAGTCTTATAAAATCACTTAAAATTGGCCATGGAGCTTT
TGTTGATTATATTTTAAAACATTTTGAAGGTACTTTATTAGAATATATCG
ATTTCTCTGGATGTCGAGGCTTAAAGAAGGAACATATCGTTAAGTGTTTA
TTGAAATTCCCAAATTTAAAACAAATTGATTATTTTGGTTGCAAGATTTT
ACAATCAGAAAGGAGCTACTTAAATGGACTAATCTTCAGAGCTGGTATTG
ATGTGAAGTGTGAAGGAGACTTTAAGTTTTCTTAAGCTCCAAAGATACCA
TGGCAATACTTTCAATGCTCACAGAGATGCACAAATTTAAGCCATGTTAT
TTGAACTTGATTTTCCATCAACACCTGCTAGAGATGGACTTTGATATTTT
GCCAAATGGTTGGAATTACATGAAATCAATGTTCAATAGATGCAAGATGA
TTGAAAATGATGATGGTGATGATTATATGTCATCTGATGACGAAGACTTT
TCGTATCCTAGTGATATCTGGAAAAGTTTTCCCCAGAAAAAAATTAAAAG
TACAACTTTGAAAAGTTTGCATAACATAGCTCTGGGAAATATTTGTAAAA
ATATGGGATATTGGATGGAATTTTTGCCAACAGACCCTCATAAATTTCTT
TATGTTATTAGCCCATTCGATGTTTTAAAGAATCAAGAGGCTGAAAGTAA
CAAATTCAAAAATATCCAAAGAGCTTATCAAAAGAATTCCAACATCATAT
CCCGGTATTGAAGAACTCAATTTGGGAGGTCCCCATCAAGACCTTATCGA
TAATTTGAAAAATTGTTGTAAATTAAAGTCACTTCATTTTACTGCCAGTT
CATTATCTGTTTTGAAGATAACATTTCCACCAGAGATACAATCCCTCACA
ATGAAACATTTAGCTGGTGATGCGAATGATTCAGACCATCTTTGGAGTAT
CTTAAATGAATTAAAGTCATTATCCAGGCTATCTCTCCATGGATCTGAGT
TACATTTTTCCACTCTTCCAGATGATATCAAATTCCCAAACGTCAAAGCG
TTGGATCTCTCAAATTGCACAGGTTTAACAAACCAAAATCTAATTTCCAT
ATTGGAGGCTGTAATCAATATCGCTGACCTAAATTTGAATGGACTGTCCT
GTGATGATACAAAGATTTTTAATTCTATTGAAAAACTACCAAATTTGTTG
ATTTTAAAAATTGCTTATTTGTTTGTGGTTTTTGACAATAATGTCAAATT
TTGCTTGAAAACAATAGGAAGTCAACTGGTTACTTTGGATATATCTGGGA
ATCTAGCTATAGACATTGATTTCATTAGAATGCACTGTCCAAATTTAGAA
AGCCTCTTATTGTCACAATGTACTTTTTTGAATCCTGATTTCTTTGAACA
AAGAATTATCGAAGATCAATTAAGTCAATATTCTTGTACGAAACTCAAGA
AGTTTGAGCTAGATTCTGTCTCTCTGGATATAATCACTGACAATACTAGT
AATATTGAACCAATCATAGGAGATGGTGAATTCAATTCGAGAATATTCGA
TACTCTTTGTCAGACAGTGTATAAACATTTCATGTCAAAAAGTCTTATAA
AATCACTTAAAATTGGCCATGGAGCTTTTGTTGATTATATTTTAAAACAT
TTTGAAGGTACTTTATTAGAATATATCGATTTCTCTGGATGTCGAGGCTT
AAAGAAGGAACATATCGTTAAGTGTTTATTGAAATTCCCAAATTTAAAAC
AAATTGATTATTTTGGTTGCAAGATTTTACAATCAGAAAGGAGCTACTTA
AATGGACTAATCTTCAGAGCTGGTATTGATGTGAAGTGTGAAGGAGACTT
TAAGTTTTCTTAAGCTCCAAAGATACCATGGCAATACTTTCAATGCTCAC
AGAGATGCACAAATTTAAGCCATGTTATTTGAACTTGATTTTCCATCAAC
ACCTGCTAGAGATGGACTTTGATATTTTGCCAAATGGTTGGAATTACATG
AAATCAATGTTCAATAGATGCAAGATGATTGAAAATGATGATGGTGATGA
TTATATGTCATCTGATGACGAAGACTTTTCGTATCCTAGTGATATCTGGA
AAAGTTTTCCCCAGAAAAAAATTAAAAGTACAACTTTGAAAAGTTTGCAT
AACATAGCTCTGGGAAATATTTGTAAAAATATGGGATATTGGATGGAATT
TTTGCCAACAGACCCTCATAAATTTCTTTATGTTATTAGCCCATTCGATG
TTTTAAAGAATCAAGAGGCTGAAAGTAACAAATTCAAAAATATCCAAAGA
GCTTATCAAAAGAATTCCAACATCATATCCCGGTATTGAAGAACTCAATT
TGGGAGGTCCCCATCAAGACCTTATCGATAATTTGAAAAATTGTTGTAAA
TTAAAGTCACTTCATTTTACTGCCAGTTCATTATCTGTTTTGAAGATAAC
ATTTCCACCAGAGATACAATCCCTCACAATGAAACATTTAGCTGGTGATG
CGAATGATTCAGACCATCTTTGGAGTATCTTAAATGAATTAAAGTCATTA
TCCAGGCTATCTCTCCATGGATCTGAGTTACATTTTTCCACTCTTCCAGA
TGATATCAAATTCCCAAACGTCAAAGCGTTGGATCTCTCAAATTGCACAG
GTTTAACAAACCAAAATCTAATTTCCATATTGGAGGCTGTAATCAATATC
GCTGACCTAAATTTGAATGGACTGTCCTGTGATGATACAAAGATTTTTAA
TTCTATTGAAAAACTACCAAATTTGTTGATTTTAAAAATTGCTTATTTGT
TTGTGGTTTTTGACAATAATGTCAAATTTTGCTTGAAAACAATAGGAAGT
CAACTGGTTACTTTGGATATATCTGGGAATCTAGCTATAGACATTGATTT
CATTAGAATGCACTGTCCAAATTTAGAAAGCCTCTTATTGTCACAATGTA
CTTTTTTGAATCCTGATTTCTTTGAACAAAGAATTATCGAAGATCAATTA
AGTCAATATTCTTGTACGAAACTCAAGAAGTTTGAGCTAGATTCTGTCTC
TCTGGATATAATCACTGACAATACTAGTAATATTGAACCAATCATAGGAG
ATGGTGAATTCAATTCGAGAATATTCGATACTCTTTGTCAGACAGTGTAT
AAACATTTCATGTCAAAAAGTCTTATAAAATCACTTAAAATTGGCCATGG
AGCTTTTGTTGATTATATTTTAAAACATTTTGAAGGTACTTTATTAGAAT
ATATCGATTTCTCTGGATGTCGAGGCTTAAAGAAGGAACATATCGTTAAG
TGTTTATTGAAATTCCCAAATTTAAAACAAATTGATTATTTTGGTTGCAA
GATTTTACAATCAGAAAGGAGCTACTTAAATGGACTAATCTTCAGAGCTG
GTATTGATGTGAAGTGTGAAGGAGACTTTAAGTTTTCTTAAGCTCCAAAG
ATACCATGGCAATACTTTCAATGCTCACAGAGATGCACAAATTTAAGCCA
TGTTATTTGAACTTGATTTTCCATCAACACCTGCTAGAGATGGACTTTGA
TATTTTGCCAAATGGTTGGAATTACATGAAATCAATGTTCAATAGATGCA
AGATGATTGAAAATGATGATGGTGATGATTATATGTCATCTGATGACGAA
GACTTTTCGTATCCTAGTGATATCTGGAAAAGTTTTCCCCAGAAAAAAAT
TAAAAGTACAACTTTGAAAAGTTTGCATAACATAGCTCTGGGAAATATTT
GTAAAAATATGGGATATTGGATGGAATTTTTGCCAACAGACCCTCATAAA
TTTCTTTATGTTATTAGCCCATTCGATGTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031696XLOC_031696Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050037-proteinTCONS_00050037-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050037-exon-scaffold_167-1575043694:378996..379245TCONS_00050037-exon-scaffold_167-1575043694:378996..379245Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1575043694:378676..378836TCONS_00050037-exon-scaffold_167-1575043694:378676..378836Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1575043694:377174..378442TCONS_00050037-exon-scaffold_167-1575043694:377174..378442Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1575043694:373705..373784TCONS_00050037-exon-scaffold_167-1575043694:373705..373784Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1510915933:378996..379245TCONS_00050037-exon-scaffold_167-1510915933:378996..379245Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1510915933:378676..378836TCONS_00050037-exon-scaffold_167-1510915933:378676..378836Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1510915933:377174..378442TCONS_00050037-exon-scaffold_167-1510915933:377174..378442Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1510915933:373705..373784TCONS_00050037-exon-scaffold_167-1510915933:373705..373784Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1491911889:378996..379245TCONS_00050037-exon-scaffold_167-1491911889:378996..379245Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1491911889:378676..378836TCONS_00050037-exon-scaffold_167-1491911889:378676..378836Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1491911889:377174..378442TCONS_00050037-exon-scaffold_167-1491911889:377174..378442Clytia hemisphaericaexon
TCONS_00050037-exon-scaffold_167-1491911889:373705..373784TCONS_00050037-exon-scaffold_167-1491911889:373705..373784Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:373705..379245 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.56157 1.62366 0.802876 0.42563 6.60087 2.72973 4.61062 3.69978 2.448 2.80744 2.46545 1.70599 2.72574 1.5923 2.4 2.65327 2.596 3.15355 1.7658 0.854829 3.71549 4.40126 7.78317 7.86857 2.06268 3.44116 3.86366 2.24913 4.9755 4.77958
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050037 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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