TCONS_00050165 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050165
Unique NameTCONS_00050165
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050165 ID=TCONS_00050165|Name=TCONS_00050165|organism=Clytia hemisphaerica|type=transcript|length=124bp
TgcggatattgcttggtccagggatatataaaggtcagtgattatAACCC
CCCTTAACATTGTACTCAATATTGGTTTTCATCGTTGTAAACTTTTTCAA
GGTGGAATTGATCATAACGATCTT
Run BLAST on NCBI

transcript from alignment at scaffold_167:548246..548369

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050165 ID=TCONS_00050165|Name=TCONS_00050165|organism=Clytia hemisphaerica|type=transcript|length=124bp|location=Sequence derived from alignment at scaffold_167:548246..548369 (Clytia hemisphaerica)
AAGATCGTTATGATCAATTCCACCTTGAAAAAGTTTACAACGATGAAAAC
CAATATTGAGTACAATGTTAAGGGGGGTTataatcactgacctttatata
tccctggaccaagcaatatccgcA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031770XLOC_031770Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050165-exon-scaffold_167-1491911889:548246..548369TCONS_00050165-exon-scaffold_167-1491911889:548246..548369Clytia hemisphaericaexon
TCONS_00050165-exon-scaffold_167-1510915933:548246..548369TCONS_00050165-exon-scaffold_167-1510915933:548246..548369Clytia hemisphaericaexon
TCONS_00050165-exon-scaffold_167-1575043694:548246..548369TCONS_00050165-exon-scaffold_167-1575043694:548246..548369Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:548246..548369 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050165 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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