TCONS_00050056 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050056
Unique NameTCONS_00050056
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1376

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050056 ID=TCONS_00050056|Name=TCONS_00050056|organism=Clytia hemisphaerica|type=transcript|length=1376bp
ATAGGGACGTTTAATAGCGGTTTGTGCACTTGGTCCAGTGGATATCGTCA
TGGGCTGTACCATCGCATTTCAATACTATGTGTCTGGAAATCTTATCTTT
CGTACTGTTGGTGGAAATTCAGTACTTCAAGTAATGTGCAAGCGTATGTT
TATGTTTACTGCTCTTCTGAAGTTTGATTTCCAATTAGTCATCAACCTAT
TGATATTGATATTGGTTGGAAATGTACACAGAGTCACTCTTGGAGAATCG
CTGGTAATTGGACTAGGAGCATTTTTCAGTATCATTTGGCTTATTCTCGG
ATATCTGATGCTACGCTATGAATTGATGAGATTGAGCAGTGTTTTTTGGT
TGTTTAGTCTGGCTGAACCTGGATACATTGTGTACCTGTTCATAAGGacT
GGTAAAGAACTGAAGAAAAATGATTTGGATTTGAAAAGTGCCCATACTAT
GCTCTTATATTGTGTTATATTGGCTGGTGTGGTTGCATTGTTGATTCGCA
TTGCTCTGGTGGTCGTTTCTATCATCGTCACTAGAAATTTTGGTAAAGGA
CTCAAGGAAAAAGtgTATGTCGATGAGCCAGCATCTGATAGTTATGGAAG
CACCCAACAAAATGccaatgaataaaagaaaatgcTTGGTAAAATCTACT
CGGTTTTAAGCCGTAGTTTTACAATTTGAAAAATgcgcacactgtgcttt
tacaTTTCGTCAGCTTGCCCGGTAAATCAGTACCCGTAACGAAAGCTAAC
CGTAGCCAAACAAGttaaaccaaaaaatattttgacctttTCGTTTGGAA
ATTAATTATTTCATACCATTCAATAAGTTCCTAGGTAatgaaatgttttc
ttttccgCCAGCGGAACGTCGCATTATTATTTTGTCTTAGCTTTTTGGAT
TATTAGGCTTTGACCATTGAGCTTCGAGTTGAAGGCTAGAGGCTAATCTT
CACcatttctcaagcaagaaaaagtaaagcctCTCTTTGTTTTCGCGGCc
tacatttttcaatttatatGTGGACAAATGTTACTTTTAATCTAGCATTT
GTAGGAAAACCACGTGGGCGGCGCAACCTAAGCTGCTTTAAATCATAGCA
GTTTCGACGCTACCCTTTGATTGCACCTTACTTGCTGTGAACCCTTATCT
TTAGGTAATTTATGCTTTTTAagttaattttatttgaaaaaaaaccacAC
ATAAAACATTGTAAATAATTGGAAACCTTTATAGATtagattatattttt
tttgcattttctttagTAGATTTTTATTTGGTCCTCATTTTCTTTTGGAt
agttttgattttctaatcTTCGTGCACGCAATTCTtactaaaaaatgatt
attattGAATTTATAATTAAAATTTT
Run BLAST on NCBI

protein sequence of TCONS_00050056-protein

>TCONS_00050056-protein ID=TCONS_00050056-protein|Name=TCONS_00050056-protein|organism=Clytia hemisphaerica|type=polypeptide|length=191bp
MGCTIAFQYYVSGNLIFRTVGGNSVLQVMCKRMFMFTALLKFDFQLVINL
LILILVGNVHRVTLGESLVIGLGAFFSIIWLILGYLMLRYELMRLSSVFW
LFSLAEPGYIVYLFIRTGKELKKNDLDLKSAHTMLLYCVILAGVVALLIR
IALVVVSIIVTRNFGKGLKEKVYVDEPASDSYGSTQQNANE
Run BLAST on NCBI

transcript from alignment at scaffold_167:667198..677153-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050056 ID=TCONS_00050056|Name=TCONS_00050056|organism=Clytia hemisphaerica|type=transcript|length=9956bp|location=Sequence derived from alignment at scaffold_167:667198..677153- (Clytia hemisphaerica)
ATAGGGACGTTTAATAGCGGTTTGTGCACTTGGTCCAGTGGATATCGTCA
TGGGCTGTACCATCGCATTTCAATACTATGTGTCTGGAAATCTTATCTTT
CGTACTGTTGGTGGAAATTCAGTACTTCAAGGTATAATTTCATGTTAAAT
TATGTTTGCTTTATGCGGCTATGAAGGTCACAATTGTTTAAGTCATTGCA
TAACTTCTTTGCTTATGTCTATTAAGATTTGCGATTTTGGTAAGCTTATA
GTTGGTCTAATTTTCACTTAAAGCACTTAACTAGAATAATTTATATCGGC
ACCGTTTTGGACTGCATACTCAGGACAATATATCTAGAGCTTGAACTTAC
TGAAAAAGCTGTAAATCCGTAAATATTTGGTGCTGCTCTAACCTTTGTAA
GTTATAAGAGGCTTGTTATTTCGAAGAACTTCACATAATCATATTCTCCT
TCTTATTTTTCCATAGTAATGTGCAAGCGTATGTTTATGTTTACTGCTCT
TCTGAAGTTTGATTTCCAATTAGTCGTGAGTATTATCATTTTCTTTTTGT
TTAGGCCGGGACAACCTCCCGGGATAGGCCGGGACAACCTCGTTCCCTGC
GTTTTATCGGCTTTTGTTATGCTTACTGATAGCGCCACATAGTACCCTGG
CTGAATGCCTCTAGCATCTTTGTAACATCAGGTTCTTTTGTGACGTATTT
TTTTGAGAATTCCCCCCTCTGAGAGAGGAAGCTCGCATCATCCAACACCA
GGGCATTCTCTGGCGTCCATCAGTAACCTATATAAAGCCTGGGATACACG
GGGACGAGGTTAAAGCGAGTATTTTGTNGTGCTGTCCATCAGTAACCTAT
ATAAAGCCTGGGATACACGGGGACGAGGTTAAAGCGAGTATTTTGTCTTT
TCTTGAAAAATTAAGGCTTAATGCTGCGAGGCACGCAACTTACTTAGGAG
AGGGTGTTGACGCGTTATTACTGTCAAGTCAAAAACAATATTTGAATTCG
AAGTTTATTGGCAGAAATCTTTTTTGATAAGAAAATATACAATAATTTAC
AAGCCGCCTTTTGTTTTAAATTTCTCACATCTCCTTTTTATAAACTATAC
CTGTTTTTGTCACAGCGTCCGCGCTGGTAGTTAACTTGGACAATTTATTA
GGGAGATAAAAAACGTTGGAACCATTCTCAATTCTTATTCTGATTTTGGA
ATTGAAAACTACCTTTGATAATCGAAAAAAGTTTATATCGAATTTCATTT
TCTTCTTTAAATTGCGACACTCTTTCACTCTCTGTTTTGATAGATCAACC
TATTGATATTGATATTGGTTGGAAATGTACACAGAGTCACTCTTGGAGAA
TCGCTGGTAATTGGACTAGGAGCATTTTTCAGTATCATTTGGCTTATTCT
CGGATATCTGATGGTAAGTTACAGCCATTCTAATTCGCGTCGGCTTCGGC
TATTGCCGACTCAAATGCCGACCTAATAGTGCTGACTGTACTTTTGAATA
CAGAATTTTTTACCGACGCAAATAAATCTAAATTAGAAAGGCTCAGTTAG
TCGCTTGAAGTTCTATAGGGCTACTTAGACTACACAATATATTGACGAAC
AATATTAAGCAGATATTCGACAAGAAAAATCGGATATCAGCTTCGCTTCG
TCGAATATCATCAAGCTCGACTGAATAATTTCGAATAATTTCGAATCCTG
TAACTGTTGGATATTGTAGAAAACGAATCCCCAGTCGAAAGGTAGCGGAG
TGTTACAGCTAAACGTTCATTAGGTTGGATAGCTTCTCTGCGAACACTGC
TGCGTCTCAATTTTGGTCCAACAATTTCAAGGAGTTGATCAAATTTCTTA
GGACTCATCCTGAACATTTGATAAAAAATCTCATGATCAACGAGTCTACA
TTGCAGCACAAGTGACACGAACTCTCCTTTTTCTCTTCTATCTTTGTAAA
TATTTCTCACCCAAAATCTTTTATTCGATTTTGGTTTGTTATCTTGAAAA
GTTCTTAAATATTGTAGATGTCTCAATCTTGCTGATGCATGTCTTTTTCT
TCTATAAATCAAAGCAAGAAGAAGTAGTCTCTTTCTGTTTATTACAGCCG
CCATATTTGTTTATGTTTTTTTTGTTTTGGTCCCGTGATCAAGACGGTAT
TTTTGACGTAATGTTTACTCCGTGCGACCAATCAGGAAAAGGGAAGAAAA
TCTTTCGCGCGCTTCGCGCGAAAGTGGACACCGGCCTTTAGGATTCGAAT
GTTCTGAAATTCGAAAACTAGATTCGAACGTCTGTGATTCGAATGTTATT
GTAAAATTCGAATGTCTACAAATGTGGGACTTCCGCGTTCAATGATGTAT
GTAAACAACAACATCAAACAACAAACACATTGACCGGCTGGGTATATTGA
GACAAAGAACAATTTGAGCATTTTTACGCATGAAACTAGAGTTAGGAATT
TGTGTTGTTGGTCAGCCTAAGCTGAGCATTCAAATAGGTAAAATTTTCCA
GTTCCTCCATAAGAAGGCAAAAAAAAAATCCGATTTTCCGATCTCACTTT
GATTTCTAAACTTTCTTCCGATCGGGTTAACTTTTTGGGTACTTTTAGCG
TGCGTTGTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAAGAAG
CTTAGTTTGGATGACTTTTCTTTTGTGTCAATAAATGTATCGAAAGACAA
GCACAACTTATGAAAATGTCATAATCTTTATAATAGATTTCCATTTAGAA
AATTCGAGAGGGCGTTTTAGGTGGTACTAGAATAAATTTAGCTGATAACG
GAAGTTTGGATATAGAAAAAGAGTTTCAATATAGTGGTTATATCTATGTT
TTTATCTTATGTAGTTAACGTCAAAATGATTTAACGTCAAAATGATATTC
TTGCATACCATGGCGGCTTCAGAAAGGCATATCTTTTTTTAAATTGATTT
TCGTGATTTCCCGTAAGCAAAAAAGTTGTTCAGAATTAAATATCCTTTTC
AACAGTATATAATATGTTAGGGTTTTTCGAAGATGAAATTTTTGCAAAAA
AAGTGCTGACGTCAACAGAAACATCATTTTCAAGAGTGTCTCTCTCAATT
TTTATTTTCTTTACTTCATGGGGAACCTCTGTGCAAAATTTCAGAGCTCT
ATCACAATTTGAAGTATCGTCCCTTTTTTATGTGATAATCCGCCCCACTA
ATATGGATTGCGGACCATAATGTACGAAGTAAACAACTGGTACTCTATTA
TAAAAAGGAATTTTCTTTCTGTGAACAATGAAATTGCCCTATATTGTTGA
AATATTGCAAATCGAGCTGACAATATATATTGCGAACATTTTCCATTATA
TTGCCGGCACATTTGAGACAGGCTTAATTAGATCATGTGTCGATCCTTAT
TTTTGGTTTTCTTCTTTTCGGATTTTTATTTTGGGCTTTTGGAAATTTAT
TTATTTATTTATTAAAGGATTGAGGTTCAAGGCGCGCCGTGGGCCTCTAA
GAACCTATCTTTTTACAAACGCTTGTTGTTACAATTTTCTTTAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTCCTCCTCTTTCTCTTC
CGTGAATACTCCAATCCTCTGTGTGTTTACAATTTTTATGTCCTTGATAC
CCAGTTGTAATCCAAGGATTCTGTACTTAATAAATTTCTCGTCGTAGATT
TTCGTTGTATTTTCGGGATCCTCAAAATTTTCCTTGATTCCATGGAAAAT
TAGATTGCATGCTGTGGATCGTTGTTTGCCGACTGTTTCACTTCGAGCCA
TTCCCAAATAGTTTGGAAACAATTGTCGGAAAGAAAACACATGTTTCCGC
CGAGTTTTTCTCCTTTAAAATCACTTTTTCCTTTACCAGCTTTTCTTTTA
GTCAGCTTACTTTATAGTCAATTGAAAATTATTAACCATAATACAGGTCT
GTGTAAAAAAGGCCTTAGGTCATCTAGTTCATAGATATATAAAACACTAG
ATCGGCCTCCGCTGTCTTTCCTCAGCACCGGCGGTTTTACTGTTTAACTA
CTTCTTTCTCTCCTTTTTTTTTCAGCTACGCTATGAATTGATGAGATTGA
GCAGTGTTTTTTGGTTGTTTAGTCTGGCTGAACCTGGATACATTGTGTAC
CTGTTCATAAGGGTATGTAGTGATTCTTTTTATATTTTCTTGTACCCCCA
TGATATGAAACCGAAAAGGCAGGGCAATCTGTTCCTCTAAAGGATCCTGC
ATTGTAACACGCATGCGTAANATATGAAACCGAAAAGGCAGGGAGTAGTT
TTCTAGATTCTCTAAATGCTTCTTTTTTATTAAATGCATAGTGGTACCAC
TGACCTATACTCTTGACTAACGTTTATCCGTCATATTTGGTCAGAGTCAT
TTGAAAAGCTTTGGTACCCTAATGGTAGCAGCACCAATAAGGTATATCCA
AAGGCTAGAGTAGAAATTCCTATGAAGGATTTGAAGCCACTTAGATTGCA
CGGACCGCGTGGTTTTCATACAAACGCTAGATTGAGAATATCATTTACTT
CCAGGATTTGAGAAATGTAAACTGGTGTCAAACTTGATAAAACTTCAATC
ACAGATTTTGATTGGCTGGGATTTAGAAACTGTGTCTAGGTTTTTGTAGT
AAGCTCAATATGAGCGTACAGTAAATTCTTAAAATAAAATACACGTGTAA
TCTTTCGCACATTGATGCAAAATGGTAACGCCCAAAATGTGACGAACCCC
AAACTTTGAAAAAAGGTTTGGGAAAAATTCTGGTCAGAAACAGCCCGAAA
TGCAAAGTTACTATATTTTATTTTTTTTTTCAGATTTTTTGTAGGAAGAC
AAAGGACAAAGTACTCTAAAAAATTGCTCAAGAAAATTTGTTTTGGTCTT
GAAAATCGGATTTTTGTATTTTAGGGAATTCCCTTTTGTCACTTTTAGGG
GAAATGGGCATTTCTCGCGATCGGCTTGTTGTTTTTCTGATTCTTTGCAC
GATGATGTAAAATTGTAATATTTAAAATCTGACGGAGCCCAATCTTTAAA
AGAAAATTTTTAAAGCAAATTTGGGTTCTGTGTTTTTAAGTGGGACACTT
AATCTAATGTATACCCAGGTCGAACTCATATCCCTTTTTTTACAAATTCT
GATTAAAAAAGGTGGATGTAACTTAGCCTAGAGTTTTAAATTCAATCTGG
ATAAGACATTTCTACGCTGGTTCTAATCAGTCTGTTCAATTTTCTTTTTC
ATTTTAGACTGGTAAAGAACTGAAGAAAAATGATTTGGATTTGAAAAGTG
CCCATACTATGCTCTTATATTGTGTTATATTGGCTGGTAAGTCCCCTCAC
TCTCCCACCTACTCTCCCACCTACTCTTGGTTGGGTACCTAATAAGCGTT
CCCGATCAATCATTTCCAACCCTGTGTCACTGCTTATTAATTTTTAGAAC
TATTATCGAACGTTAAGTTAATTGGTTATTAATTAATTAATACTTTATGT
GCCTCTTTATTTTTGTCGTCAAACCCTTAGCCTTTAGTTTTAACACCACC
AGAAATAACCGACCATCGCTTAATCTTTTCCTTCCACCTCTTGTTCGATA
AAACTGAAAACAAAAGTGAAGTCCAGTTTATTTTGCTCACTGTCCAGAAG
CTGGAGCTGAACTACTTTCTGCCTTTAATGATTCTTATTTGCCATCATTC
AAATCAGAAAACGAAGATAGTATACGGCAGATTCTCTAACTATTTTTCTC
ATTGGAAACATGCGTGAAGTGGTTTGGCTCTTAGACTTTAACTCTCTCTT
TAATCAATGATTTGAAAAATTGTGATCACGATTCATTCCATATAGGTGTG
GTTGCATTGTTGATTCGCATTGCTCTGGTGGTCGTTTCTATCATCGTCAC
TAGAAATTTTGGTAAAGGACTCAAGGAAAAAGGTATTTGTGTTGCTTCCC
TTTTTGAAATCCAAAGAATTTTAAATTCCACCTACCCTGCGCTTCAAACG
TGTTTTGTATAAAAATGTATAAGATGCTGAAAAACCGTCAAATTCAACTT
ATCATATTATTGTTGTAACTTTAACTCTTAATTTTTTCTTCAGTGTATGT
CGATGAGCCAGCATCTGATAGTTATGGAAGCACCCAACAAAATGCCAATG
AATAAAAGAAAATGCTTGGTAAAATCTACTCGGTTTTAAGCCGTAGTTTT
ACAATTTGAAAAATGCGCACACTGTGCTTTTACATTTCGTCAGCTTGCCC
GGTAAATCAGTACCCGTAACGAAAGCTAACCGTAGCCAAACAAGTTAAAC
CAAAAAATATTTTGACCTTTTCGTTTGGAAATTAATTATTTCATACCATT
CAATAAGTTCCTAGGTAATGAAATGTTTTCTTTTCCGCCAGCGGAACGTC
GCATTATTATTTTGTCTTAGCTTTTTGGATTATTAGGCTTTGACCATTGA
GCTTCGAGTTGAAGGCTAGAGGCTAATCTTCACCATTTCTCAAGCAAGAA
AAAGTAAAGCCTCTCTTTGTTTTCGCGGCCTACATTTTTCAATTTATATG
TGGACAAATGTTACTTTTAATCTAGCATTTGTAGGAAAACCACGTGGGCG
GCGCAACCTAAGCTGCTTTAAATCATAGCAGTTTCGACGCTACCCTTTGA
TTGCACCTTACTTGCTGTGAACCCTTATCTTTAGGTAATTTATGCTTTTT
AAGTTAATTTTATTTGAAAAAAAACCACACATAAAACATTGTAAATAATT
GGAAACCTTTATAGATTAGATTATATTTTTTTTGCATTTTCTTTAGTAGA
TTTTTATTTGGTCCTCATTTTCTTTTGGATAGTTTTGATTTTCTAATCTT
CGTGCACGCAATTCTTACTAAAAAATGATTATTATTGAATTTATAATTAA
AATTTT

Coding sequence (CDS) from alignment at scaffold_167:667198..677153-

>TCONS_00050056 ID=TCONS_00050056|Name=TCONS_00050056|organism=Clytia hemisphaerica|type=CDS|length=4032bp|location=Sequence derived from alignment at scaffold_167:667198..677153- (Clytia hemisphaerica)
TGTATGTCGATGAGCCAGCATCTGATAGTTATGGAAGCACCCAACAAAAT
GCCAATGAATAAGTGTGGTTGCATTGTTGATTCGCATTGCTCTGGTGGTC
GTTTCTATCATCGTCACTAGAAATTTTGGTAAAGGACTCAAGGAAAAAGA
CTGGTAAAGAACTGAAGAAAAATGATTTGGATTTGAAAAGTGCCCATACT
ATGCTCTTATATTGTGTTATATTGGCTGCTACGCTATGAATTGATGAGAT
TGAGCAGTGTTTTTTGGTTGTTTAGTCTGGCTGAACCTGGATACATTGTG
TACCTGTTCATAAGGATCAACCTATTGATATTGATATTGGTTGGAAATGT
ACACAGAGTCACTCTTGGAGAATCGCTGGTAATTGGACTAGGAGCATTTT
TCAGTATCATTTGGCTTATTCTCGGATATCTGATGTAATGTGCAAGCGTA
TGTTTATGTTTACTGCTCTTCTGAAGTTTGATTTCCAATTAGTCATGGGC
TGTACCATCGCATTTCAATACTATGTGTCTGGAAATCTTATCTTTCGTAC
TGTTGGTGGAAATTCAGTACTTCAAGTGTATGTCGATGAGCCAGCATCTG
ATAGTTATGGAAGCACCCAACAAAATGCCAATGAATAAGTGTGGTTGCAT
TGTTGATTCGCATTGCTCTGGTGGTCGTTTCTATCATCGTCACTAGAAAT
TTTGGTAAAGGACTCAAGGAAAAAGACTGGTAAAGAACTGAAGAAAAATG
ATTTGGATTTGAAAAGTGCCCATACTATGCTCTTATATTGTGTTATATTG
GCTGCTACGCTATGAATTGATGAGATTGAGCAGTGTTTTTTGGTTGTTTA
GTCTGGCTGAACCTGGATACATTGTGTACCTGTTCATAAGGATCAACCTA
TTGATATTGATATTGGTTGGAAATGTACACAGAGTCACTCTTGGAGAATC
GCTGGTAATTGGACTAGGAGCATTTTTCAGTATCATTTGGCTTATTCTCG
GATATCTGATGTAATGTGCAAGCGTATGTTTATGTTTACTGCTCTTCTGA
AGTTTGATTTCCAATTAGTCATGGGCTGTACCATCGCATTTCAATACTAT
GTGTCTGGAAATCTTATCTTTCGTACTGTTGGTGGAAATTCAGTACTTCA
AGTGTATGTCGATGAGCCAGCATCTGATAGTTATGGAAGCACCCAACAAA
ATGCCAATGAATAAGTGTGGTTGCATTGTTGATTCGCATTGCTCTGGTGG
TCGTTTCTATCATCGTCACTAGAAATTTTGGTAAAGGACTCAAGGAAAAA
GACTGGTAAAGAACTGAAGAAAAATGATTTGGATTTGAAAAGTGCCCATA
CTATGCTCTTATATTGTGTTATATTGGCTGCTACGCTATGAATTGATGAG
ATTGAGCAGTGTTTTTTGGTTGTTTAGTCTGGCTGAACCTGGATACATTG
TGTACCTGTTCATAAGGATCAACCTATTGATATTGATATTGGTTGGAAAT
GTACACAGAGTCACTCTTGGAGAATCGCTGGTAATTGGACTAGGAGCATT
TTTCAGTATCATTTGGCTTATTCTCGGATATCTGATGTAATGTGCAAGCG
TATGTTTATGTTTACTGCTCTTCTGAAGTTTGATTTCCAATTAGTCATGG
GCTGTACCATCGCATTTCAATACTATGTGTCTGGAAATCTTATCTTTCGT
ACTGTTGGTGGAAATTCAGTACTTCAAGTGTATGTCGATGAGCCAGCATC
TGATAGTTATGGAAGCACCCAACAAAATGCCAATGAATAAGTGTGGTTGC
ATTGTTGATTCGCATTGCTCTGGTGGTCGTTTCTATCATCGTCACTAGAA
ATTTTGGTAAAGGACTCAAGGAAAAAGACTGGTAAAGAACTGAAGAAAAA
TGATTTGGATTTGAAAAGTGCCCATACTATGCTCTTATATTGTGTTATAT
TGGCTGCTACGCTATGAATTGATGAGATTGAGCAGTGTTTTTTGGTTGTT
TAGTCTGGCTGAACCTGGATACATTGTGTACCTGTTCATAAGGATCAACC
TATTGATATTGATATTGGTTGGAAATGTACACAGAGTCACTCTTGGAGAA
TCGCTGGTAATTGGACTAGGAGCATTTTTCAGTATCATTTGGCTTATTCT
CGGATATCTGATGTAATGTGCAAGCGTATGTTTATGTTTACTGCTCTTCT
GAAGTTTGATTTCCAATTAGTCATGGGCTGTACCATCGCATTTCAATACT
ATGTGTCTGGAAATCTTATCTTTCGTACTGTTGGTGGAAATTCAGTACTT
CAAGTGTATGTCGATGAGCCAGCATCTGATAGTTATGGAAGCACCCAACA
AAATGCCAATGAATAAGTGTGGTTGCATTGTTGATTCGCATTGCTCTGGT
GGTCGTTTCTATCATCGTCACTAGAAATTTTGGTAAAGGACTCAAGGAAA
AAGACTGGTAAAGAACTGAAGAAAAATGATTTGGATTTGAAAAGTGCCCA
TACTATGCTCTTATATTGTGTTATATTGGCTGCTACGCTATGAATTGATG
AGATTGAGCAGTGTTTTTTGGTTGTTTAGTCTGGCTGAACCTGGATACAT
TGTGTACCTGTTCATAAGGATCAACCTATTGATATTGATATTGGTTGGAA
ATGTACACAGAGTCACTCTTGGAGAATCGCTGGTAATTGGACTAGGAGCA
TTTTTCAGTATCATTTGGCTTATTCTCGGATATCTGATGTAATGTGCAAG
CGTATGTTTATGTTTACTGCTCTTCTGAAGTTTGATTTCCAATTAGTCAT
GGGCTGTACCATCGCATTTCAATACTATGTGTCTGGAAATCTTATCTTTC
GTACTGTTGGTGGAAATTCAGTACTTCAAGTGTATGTCGATGAGCCAGCA
TCTGATAGTTATGGAAGCACCCAACAAAATGCCAATGAATAAGTGTGGTT
GCATTGTTGATTCGCATTGCTCTGGTGGTCGTTTCTATCATCGTCACTAG
AAATTTTGGTAAAGGACTCAAGGAAAAAGACTGGTAAAGAACTGAAGAAA
AATGATTTGGATTTGAAAAGTGCCCATACTATGCTCTTATATTGTGTTAT
ATTGGCTGCTACGCTATGAATTGATGAGATTGAGCAGTGTTTTTTGGTTG
TTTAGTCTGGCTGAACCTGGATACATTGTGTACCTGTTCATAAGGATCAA
CCTATTGATATTGATATTGGTTGGAAATGTACACAGAGTCACTCTTGGAG
AATCGCTGGTAATTGGACTAGGAGCATTTTTCAGTATCATTTGGCTTATT
CTCGGATATCTGATGTAATGTGCAAGCGTATGTTTATGTTTACTGCTCTT
CTGAAGTTTGATTTCCAATTAGTCATGGGCTGTACCATCGCATTTCAATA
CTATGTGTCTGGAAATCTTATCTTTCGTACTGTTGGTGGAAATTCAGTAC
TTCAAGTGTATGTCGATGAGCCAGCATCTGATAGTTATGGAAGCACCCAA
CAAAATGCCAATGAATAAGTGTGGTTGCATTGTTGATTCGCATTGCTCTG
GTGGTCGTTTCTATCATCGTCACTAGAAATTTTGGTAAAGGACTCAAGGA
AAAAGACTGGTAAAGAACTGAAGAAAAATGATTTGGATTTGAAAAGTGCC
CATACTATGCTCTTATATTGTGTTATATTGGCTGCTACGCTATGAATTGA
TGAGATTGAGCAGTGTTTTTTGGTTGTTTAGTCTGGCTGAACCTGGATAC
ATTGTGTACCTGTTCATAAGGATCAACCTATTGATATTGATATTGGTTGG
AAATGTACACAGAGTCACTCTTGGAGAATCGCTGGTAATTGGACTAGGAG
CATTTTTCAGTATCATTTGGCTTATTCTCGGATATCTGATGTAATGTGCA
AGCGTATGTTTATGTTTACTGCTCTTCTGAAGTTTGATTTCCAATTAGTC
ATGGGCTGTACCATCGCATTTCAATACTATGTGTCTGGAAATCTTATCTT
TCGTACTGTTGGTGGAAATTCAGTACTTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031702XLOC_031702Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050056-proteinTCONS_00050056-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050056-exon-scaffold_167-1575043694:677023..677153TCONS_00050056-exon-scaffold_167-1575043694:677023..677153Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1575043694:676629..676687TCONS_00050056-exon-scaffold_167-1575043694:676629..676687Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1575043694:675741..675860TCONS_00050056-exon-scaffold_167-1575043694:675741..675860Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1575043694:669942..670028TCONS_00050056-exon-scaffold_167-1575043694:669942..670028Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1575043694:668768..668846TCONS_00050056-exon-scaffold_167-1575043694:668768..668846Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1575043694:668172..668258TCONS_00050056-exon-scaffold_167-1575043694:668172..668258Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1575043694:667198..668010TCONS_00050056-exon-scaffold_167-1575043694:667198..668010Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1510915933:677023..677153TCONS_00050056-exon-scaffold_167-1510915933:677023..677153Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1510915933:676629..676687TCONS_00050056-exon-scaffold_167-1510915933:676629..676687Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1510915933:675741..675860TCONS_00050056-exon-scaffold_167-1510915933:675741..675860Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1510915933:669942..670028TCONS_00050056-exon-scaffold_167-1510915933:669942..670028Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1510915933:668768..668846TCONS_00050056-exon-scaffold_167-1510915933:668768..668846Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1510915933:668172..668258TCONS_00050056-exon-scaffold_167-1510915933:668172..668258Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1510915933:667198..668010TCONS_00050056-exon-scaffold_167-1510915933:667198..668010Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1491911889:677023..677153TCONS_00050056-exon-scaffold_167-1491911889:677023..677153Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1491911889:676629..676687TCONS_00050056-exon-scaffold_167-1491911889:676629..676687Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1491911889:675741..675860TCONS_00050056-exon-scaffold_167-1491911889:675741..675860Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1491911889:669942..670028TCONS_00050056-exon-scaffold_167-1491911889:669942..670028Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1491911889:668768..668846TCONS_00050056-exon-scaffold_167-1491911889:668768..668846Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1491911889:668172..668258TCONS_00050056-exon-scaffold_167-1491911889:668172..668258Clytia hemisphaericaexon
TCONS_00050056-exon-scaffold_167-1491911889:667198..668010TCONS_00050056-exon-scaffold_167-1491911889:667198..668010Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:667198..677153 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.609	41.9188	45.0576	44.7216	5.49362	5.15105	5.00288	4.50069	8.12096	7.20322	11.5808	7.91649	9.30057	8.06294	11.963	13.0604	6.27599	7.5087	8.40235	9.57025	6.73105	6.02153	16.9405	16.6056	5.64672	7.48652	7.37834	6.76217	8.40189	8.93836
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050056 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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