TCONS_00049925 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049925
Unique NameTCONS_00049925
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2716

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049925 ID=TCONS_00049925|Name=TCONS_00049925|organism=Clytia hemisphaerica|type=transcript|length=2716bp
TTACAAAGCAACTGAGACGGAGAGTAATGCTACCTTACCTGAAAAAGGTG
AATTTTATCCTTACAAGCACAATCCGCTGGCAGTGGCACGTTACAATCAC
AGTAAAGAAATGTTGAGCGGACAACGTAAAGAAATGTTGGATATTCTTGA
TGATCACTTGGAAAAGAGAGGTCTCGATCCGGACGAGCGAAGAATGGCGC
ATCAagtttacaaaaagaaattagCTCACTTAGTAAAAGAACAGGagatg
aaaaacaaaacattcccTGGTTTCACTCACTATCGACAAAAATTGAAGGA
CGCCGTGGATGATTTCACCTTCCAAGAATGGGCCaagaaaaaaggcaaaa
aagctGGCAAGAGGTTCAAGCAAGCTGCAGGAGCCATAAAAGGGTTGGTT
CAAGCAGTGAAGAAATCGCCAATACGAGAAGAAATCAAACAAGACAGACA
TTCTTCCACTTTCGATGATGATGAATCGTTTGAGGGTAGTGATAGTGATG
AGACCAGTCCTCCCCCTGCAGATAAGAAACAGAGAAAAATTTACACAAAG
GACCTCGAAGAGGTTTCATCAACGGAGAATGAGCGAGTCATGTTGCGTTA
CCAACGAGCGATGGATAGTGATGAAGAATCTATCGTTCAAAGAAATGACG
AAGAAACAAATGAACAACCTCACGAAGAAGAAGAGGATTTAAGTGGTACA
TGGGACACTGATGAGGATGACGATTTAGACGAAACAGACGAACACCAGCG
TCACCAAAACCAACCACAATCACCACCGCAGTATTATCAtcaacaagaag
aagaagaataccGTCCAAAAATGAGATCGCCTCAAGGGGAAAAGGTGAAA
GAACTGACAAAGAACTTGGAAGCCAGTTTGACACTCCGTGGTTCGATCAA
AAAGCCAGCCGGTGCAGTAGATCTTCACCATACAcaagaaaaagatgaaa
atgaactCAAACCTAAACGATCTGTATCCTTTCGCGATCAAAATCAATAC
CATGGTGGTGGAAATATGGAAGATGAAGACGATGAAAGCGATTTCTCTCT
CTCCTCCAATGACAATACGAGggaGAATCAAGACAATTCACAAAACAAAg
GATCTTACCGCCCTTCAACAAGCAAGCCACCAGCGCCCTCTTCTTCGTCA
ACGCCTTATGGTGCATCTACGGCTGGTCCATCAAGACAGCAACAACAAAG
CACGGCTGTCACCAAGTTCACACTTGAAGATTTCGATGATGACGATGAAA
GCTTTTAAGAAAGAAATCCTTTGTTGATGGTATTTGAAGCAGAGAACGTG
TGCTACGTGCCCGGGGGgtgtactagggcaaaatgggttacggggatgcg
ccgctggtcagggtatttttttaacctccacgaatcccaggtagggtcga
aaaaaaccttttttggaaaatttgggggaaattATTGAAGAAACGAGTCC
Catgtagggtccatttttcgaatctcagcggagcacccctgttagtcggc
aagggtagtatcCCCCCCCCCGGATACGTGATGGTGTGGTATGCTGTTGA
TGAATTTCCAATGTATTTATTATGAGCATTCGGAACCAAAGGGGATGATA
TCTGGATTTTGTAATAATAGAATTACAGTTGCTTATACCATTACATTAAA
TTGAGGTAATCATGGCTCCTTGTATTTTCTACCTACTGAAATAGAATAGT
ACTTGAGGGTAGAGGTCCAATAAAAAGGGACTATCAAGGTGACTATCAAA
GTTGTTTTTTGTGTTCtctaaaactacattttgatggtCTACCGTATGAG
AAGAAATGTTTCACTGTAAGACAGGGGAAAAAAGATCTGGAAATATGAGT
ATGATTATGGTGCAAGTCCATCAGTTGACAATACAGAAGTTTTATTGAAT
Gccttaaatatttttctaatcagaacaaactatataagaacatgaggctt
cgatggctagaatattaagaacaagtcaagCCTTTGCGGACTCcaaaata
cccaatttcttagcaaatggcacaaaaatactctaaaaattaagtgaaag
ttgagaacatccgaaagcttcaaaaattttggacatGCAAATTGAGAACA
TCCGAAAGACATGCAAATTTACTTTGTTCACATATTATTCTATAAAACAT
ACTTATGTAAATATTGACGCTTatttaaaacagttttttaagattttgat
tttaaattgagTAGAATACACCACTTGTTCAGGATAATTTTGAGTCAAAA
TGCACTTTGCGAGTCACTCACATAGTTTTTTGTACTTAGCATGATAgtaa
tttttgatgaattttcgaaGATTACTTTTGTATATTTCTAAATTACCAGT
ttaaatctttgtcaaattatCCTTAAAAAACGTTTGTAGATTCTTAtgaa
tttaaaactttaaaaattttgatgatattaGTATTATTAGGAATTTATGA
TTTAgttaattttacaaatttttattttgtatttatgagttggtagattt
tttttaaatcgcggATCAAATTCGAACAAAGAccttcaaaaataattatt
ttattgaGATGTTGTTATTTTGTTGAAATGTAACCTCTCTTAGCTTAAAG
TCAAATTCAAACAAGTTTATGGACTCTAACatgtggggggcgtacgaggg
ttgccaacaccgaaataccgacagatttttcttaaatcaccgtaataccg
acaaaattttcctaaa
Run BLAST on NCBI

transcript from alignment at scaffold_167:922737..937874+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049925 ID=TCONS_00049925|Name=TCONS_00049925|organism=Clytia hemisphaerica|type=transcript|length=15138bp|location=Sequence derived from alignment at scaffold_167:922737..937874+ (Clytia hemisphaerica)
TTACAAAGCAACTGAGACGGAGAGTGTTAGAAAATTCATATCATACCAAA
GCAGTAACTCTCCTTCATGGATAAACCTCTCTTTCTACTCAACTCTTCCA
TTAGAACGATATAAACAACTTCGCCTTTCCTTTTAATAATATATTGAGCT
CGATAATAAAAGTCTTTAGAACATCCCTTCTTcttacagacccggtagga
tttttcagccatCAGGGGGGGGGTGTGAAAAATAACAAACTGAACCTCAA
TGGTTGATATTCCCTTTTTTACGGCTGGGGgtttgaatttcattgttttc
aagtcagaaagttCGGTAGGGATGTAAATAATAGCACAATATTTAGCAGT
GagaatttgtttatttgattattttcagccgGGACAAAAAATTGAGTCTa
atttttccactggggacgatatttttgccaattgtTTTTAGTGGGAAAGG
GTCCCACTGGgtgtgtgagaagggggtgttttagaTGACGACTCAAAAAC
TAACACTTTCATAACAATTTCCAAAGTCCGAGGCGTAGTTTTTGAAGCCG
AATTTCAACCgcgtattgttcttataaaaatatgcttttaatatggtgtg
ttttgtttttcaagTAGATTCTTTTTGAGCGCCATCTATCTAGTTCTTAA
CTTGACTTTCCCAAAAACCTTGTTGGTAACTGACGATAAGTCCCGTTAAA
GGTCCATTCTTAACTATCCTTTTTTCATTCATATATAGAATGCTACCTTA
CCTGAAAAAGGTGAATTTTATCCTTACAAGCACAATCCGCTGGCAGTGGC
ACGTTACAATCACAGTAAAGAAATGTTGAGCGGACAACGTAAAGAAATGT
TGGATATTCTTGATGATCACTTGGAAAAGAGAGGTCTCGATCCGGTAAGG
TTTACATTAGAAAGGTTACTTCTCATGGAGAATAATATATGTACATTTAT
GTAATGAAAGTTTCCTACTAGCTTTTACTATCCTTATACTATGACCTTCA
GGGAAAAATAAAGTCGGTGGTAAGTAAATCATTCTTTGGAACAGTGACTG
AATATTTTCCTGATAAGTTTGAGCAGGCTAGTGACACAATTTAAATTAGG
TGACCCGATTTCTTCCCAATCAGAATTTGCTATTATGAAAATAATCAGAC
TCCTTGAGTTAACAATAACGTATTTTACAAGTTGAATTTTACAGTTTTCA
CCCGGGGAGGGTACTAGAGTTGCGGCCTGACTATCtctgacccttagcgg
gactaaattAAAAAGgaggtaaaaagaaaaatgtagtGAATTTACGGCTC
TTATTGggattattttttccaaatttcgacCTTTCAAAGTTTtccctttc
caaatttccaggttccaaaaaaggaaattttaagGGCTGCCAATACTTGT
ACCTTTCACTTACCTAGGTACCTCCCCCGGTAGTTTTTGACCGTTACACG
ACAAATATCACATTTTCTTGAAGGACGAGCGAAGAATGGCGCATCAagtt
tacaaaaagaaattagCTCACTTAGTAAAAGAACAGGagatgaaaaacaa
aacattcccTGGTTTCACTCACTATCGACAAAAATTGAAGGACGCCGTGG
ATGATTTCACCTTCCAAGAATGGGCCaagaaaaaaggcaaaaaagctGGC
AAGAGGTTCAAGCAAGCTGCAGGAGCCATAAAAGGTTTTTTCTCGACTTT
CACGTCTTAAAATACTGACCTTTTGACGGCATGAGTTTTTCTGAATATTT
TCATCGAATCGAATATCTAAGACCTCAAGTGTGTATTTTTGCAAATAGCT
CTTTTCTCAGAAAAATCTTGGCATTTCGCAGAAAAAAAGATTAATCTTAA
CCCAAAAGAACATTTACCAACAAAGCTTCGTCTAAGAAATTTTTTCTCAG
ATTCGCTATTGCCATACAAAATCTTGAAGATCTCAAATATAATAGACTGA
TTATCTTCATTTTAGGTTAcgctaaaattttgaaaggcaTCCCTAAATCA
atgtgtttaacaaaatattAGTCTACGTTGcattaaaatgttttgaaaac
ctTGCTTCAGATTAAAGACCTAGAACCGTTCAAAACAGACCTTTTTAAAT
GTGTCAAAATCATTAGGGTTGGTTCAAGCAGTGAAGAAATCGCCAATACG
AGAAGAAATCAAACAAGACAGACATTCTTCCACTTTCGATGATGATGAAT
CGTTTGAGGGTAGTGATAGTGATGAGACCAGTCCTCCCCCTGCAGATAAG
AAGTAAGTCTTGGGCACTGgactaagaccatgttcactcgttactgttcc
gtttcgctccagtatgattttcgttacggatcgagtgtgttcatattggt
ttcgaaACGTTTCGGGGCAAGAAAGCGGaacagttccgttccgatgaaaa
tagtggagtgAAATCGTTtcaatctgttttgctttgtaacgtcttctttt
ttgacgtttcgaattttgacgctCACACattttcggaaccgtttcggaaC
GAAACGGAACGGAACGGAGCCGTAACGCCTAAACATGGTCTAAGCTTTAT
CCATCATATTTGATCGgagtctttttgaaaattttcaaagctttttgTTG
GCTAAGATTCAGAAACTGCTTCTAGGATGGCCACCTGGTGCCAGACTTTG
GTCCTCATCTATCCGTactccatttatttctcaactttctatacattcac
ttaccggttttctctaaGCTAAATCTGAAAATTTGTTCATTTGTCGGTTG
TCAATTTTAAGATTGTCGGTTTGTCGGTCTTTTGGCTTTTTGGGTTTTTT
TGATTTgtcatttttgttgatttttagttttgttAGTTTGCCACTTTTAG
CTCAACATGTGtcgtttctgaattttaattagctttttctgatATACAAA
ACTTAGTAGTTTTTAGGGATTTATTCAAGAATTTCATCCGTATTTTGAGT
CCGTATGCTTTCTTTTAGACAGAGAAAAATTTACACAAAGGACCTCGAAG
AGGTTTCATCAACGGAGAATGAGCGAGTCATGTTGCGTTACCAACGAGCG
ATGGATAGTGATGAAGAATCTATCGTTCAAAGAAATGACGAAGAAACAAA
TGAACAACCTCACGAAGAAGAAGAGGATTTAAGTGGTACATGGGACACTG
ATGAGTAAGTTGCCTTCTTCTTCtccctttttggacctaccacggagatc
ctttaaattaactgatgttcgtccgttcgtatgttaccagcttttctcgg
gattggctcattagttttttcggattttttgcataaatatAGAAGGCAGg
attctctaaaaagtggctgaaggtttttttcggaaattttttttagtttc
atttTTCCTGGTGTTTgcattttactttttacatgactgaatttcttttt
tacacACCAGGGGAGAGCTTTCACTAATTTCTGActtttaaaatgtaatt
ttcatACGATAGAAATGATTTCTCTTAAAACcattttggctgtttttaca
CTGATTTCTAACCATCGTTCTGTAACAGTACGTACTGCTAAATACGATCA
AACGTAAgaccatcaaaaacatcaagACCGTGTTCACGCACTACGGTTCC
GTTTCaatccgaaacgaaatgaagccgtTCTACtgtattggttagaagtg
acttAAGACTCGATTCTAACTAATAAAATGGCtttatttcgtttcggagc
gaaccGGAACTGTAGCGTCTGAACGTGATCTTAGACCATGCTCGCACgta
acggttccgtttcgctccgaaacgaaatgaagccattctattggttaaat
tcaagttttacgtcacttccaaccaatagAATGGATTCATTTCGTTTTGG
AGCGAACCAGAACTGCagcgtgtgaacgtggtctTATTAGAAACATGAAT
GATTGATCTCTTTTTACCTAGGGATGACGATTTAGACGAAACAGACGAAC
ACCAGCGTCACCAAAACCAACCACAATCACCACCGCAGTATTATCAtcaa
caagaagaagaagaataccGTCCAAAAATGAGATCGCCTCAAGGGGAAAA
GGTAACGTTCAAAAATATTAATTGTACAATCGAGTCTCCATAGTAGTAGT
AGTAGGGGGCCAATCTTTAGCAGATCCGTAGCATCTTTCGTGGGACTCGA
AAGGAGACcggattttgaaacttttttgagagaGGGGGCTCTTTTGAATA
TTATTTGTCAAAATGCTGTCTTCAACACGAAACTCATGCCGTCCTCGAGG
ACTTACGTTATAGTCCAAACACGGGAACAGCGCAACCACTGTGAGATTCG
ACCTCCGGGCTTCCTATGACTTTTGGATTTTGTTAGTTACAGACaatagt
tttttgttttaattctctttttttGGTCACGTGCTGATTATTCTTATTCA
CCTATaaccaaaaaattaataaagtcatattttttgttataaaatcattt
tcttattcATGTCTCATTGAACAGGTGAAAGAACTGACAAAGAACTTGGA
AGCCAGTTTGACACTCCGTGGTTCGATCAAAAAGCCAGCCGGTGCAGTAG
ATCTTCACCATACAcaagaaaaagatgaaaatgaactCAAACCTAAACGA
TCTGTATCCTTTCGCGATGTAAGTTGAAAAAAAGgaattcttcatttttg
tagGGGGCCAACCCTTAGGGTCCGTAGCATCTTTCGTGGAACTGAGGCGT
GACCGCATAtgattggttcgaaagtagatgggatttggagacttttttga
aacGGGACCAGCGAATAAGACCTGGTACATGAAAGTTTTTATCGCCAAAA
AGCTAATGTTGCAGGCAAAATTCCTAATGACAATGAATTATTTCGAACTG
GAAAGATACTTCCTATATAATCAGGAGCTGACCACTCGATCTCCTTTTTG
TTAACAAAGGCTGACCCGAGTGAAATTTGCTTATAAACAGAACGGCTTCA
AGTCAGAACTAGTCTTTTATTGCTCATACAGGAACTTGTGTCGATGACTA
CCGTTTGACATATGCACTCTGTTCAATAATCTTTCAGATACATGGTCTAT
GCGGGCCCTTGTGACAGGCTTCCTCCCTTTATCCCCTTTAATCGTCAGTC
ATTTGGCTTTCCCAGAAATAAATTGAAtattgggggtggaggatataaca
ttttttagaaatttacccGCCGGTCATTGTGACTTTTGAACCCCCGGATA
GCTGTTCCAACCCCCGGACAaacatcagttgaccccctggactcTATCTG
CTATATTGGTTTTTCAGGTTTTGTTTAGTTACGCAATTTCTGCCATTATG
TAAATAAACTTTCAATCGGTAGATGCAATACCTTAAGCAAATTGAACGCT
TCCATAATATCGGTTAAGTTATGTAATTCAACAAGACATGGAATTACTAT
TTGGTTCAATACCaatagaccagcgtccgagattcaaaaaaggcctttaa
aatggttttcgtagggcaccccttagatcagggcaaatttttgatattat
gctcctaatagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcaattctacacc
ctattaggagcataatatcaaaaatttgccctgatctaaggggtgcccta
cgaagtgacacaatccactgcctcggccgctggtctacaAATATGgagga
attcatgatatgcaccattgtaatgtcttctgatattacatcacggaccc
aatgaatagctgattggttgtaagtgacgtaaaatcagtcaataagtcac
tttcaaccaatcagctgttgggtccgtagaagacattacaatgatgcata
tcatgaatagagtcAGAGTCATCAGATAGATGATAAACATTTTCTCTTTC
TCTCTTTCAGCAAAATCAATACCATGGTGGTGGAAATATGGAAGATGAAG
ACGATGAAAGCGATTTCTCTCTCTCCTCCAATGACAATACGAGGTGAGTG
GATtaaattatttcaatatttttattgaattttgaaggtaTTATTTACAa
tagactctcgcttattcggacttctataattcgaaaatttctataattcg
aaataACTCCAAGTCCCCGTCAAAGGGAAGCCATTAAaatgctttctata
attcgaacttcgAATAAGAGTGGTGATTGTATATCGTAAAATCGCAGTTT
GACGTCactaagtgtgcaaaatctttgGCTCTAATTCTAAATTGGATCTA
CATACTTCATCGTAAATTTCATTGGTCCCCAATTTGAAAGCCATAATATA
CGAAACATGTAGTATTCGATATTAAAAAACAAAGaggaaaaaacaaagaa
tttgAACACTAAgttgatttgagtttttttgtatatttatgaaaaataaa
gaaatttataGAAGAAGTATGTGGCAACTTACAAATGAGTTACATTGCCG
GCTTCATCGGTAACCATGATTGATGGAATGATATTTTTACCGGGGACGTG
TTCAGTATCTGGGGCGTGTTCAGTATCCGGGGCGTGTTTAGGGGCGGATT
GTCCAATTTCATGAACATCAAGCATAGCGGTTTGTATACCTGTAACTGGT
TTTATAACTTTGTCCACGTCAGGGACATCGTCAGGTATATCAATATTGGA
TTCGTTATGCTCCAGGGCTCCTTTTGTATTGGCACTTGCCTTTGCCAAAG
TGTTGATATTTCGAACGGCAGTTTTAGTTGTGTTGACATCGCTTTGTAcg
ttttttaggattttatCCATTCGTTTGGCGTTTCTAGAGCTACCATTAAT
GGCATCCACTTCAACATTAGAGACTGACTTGCCTTTGTCAGTAGCGTTAG
AGCTGCTAGGAACAGCTCCTAGGTTCTTGGGGTCATCACGGCTCTGGCTT
GCTTTTCGGCCACGTCGTCGTCCACATAGCGAAAAACAGCTAAATAATCT
AAATCCTTTCTTagactttttcgatttttcttcCTCCAGTTCGCAAATGG
TTGCTTCAAGGGAGGTCTAAAATGAAGGAgcgttttgattaaaaaaatta
tctgtCGATAATGAAATTATCAAAACTGAGCCGAACTTACATAAACAGCG
TGGGTCTTAACTTTCTTTAGATATCTTTTGAGCTAGGGTCACATTGTAAC
AGCCAATAGTCGCCAGCGATATAGTTTACCTTATACCGCAAACGCAGGTT
ACTCTGAGACGGGAGGAGAAGGCATTCTTCATCGACCAGCTAGATTGATG
ACCATTTCACGACGACCCCCAAAGGATTTTGTTAAAAAGTAACAAACTTA
CCTTCTCCTTATCAACATTGATCAGGTTGATTTCTAATTGGCTTATTTTA
TCGTTCATCGCTTTTAATTCGTTTTTCTAaagttagaaaataaaatttga
aaaacttgcTTATATttaattatgattttttgctagATTTACTTATTCCA
GTAAGTTACTTCTCATAATTAAGTTTATCAAAAGTAATATTCTAGCTTAA
CGCTCTTGAACACTAGTGCAGTATACAAAGCATTCCGTCTCGATGGATTT
CCTTCTCAGTGAAGTATAAAAAGAGGCTTTTCCCTCTCAAAATTCACCAA
AGATTTGAAGAGTCTCGcataatacacgggttgcaaaattatattaGTGC
AGTCAGAACatttgattactcgaaaaatttCACGTGATTTCATTCCCATG
TTACGTtactttacaacttacagctgataactttattagtgtcaaaaaat
tcgaaccaatcagaaataaatgtcatacAAGCACATACAAATTCGAGTta
ttcgagtaaaagcgtgatttgtcttcaatTAATTTTGCAACATGTGTATT
TTGTTTAAGGTTTGAGACAATAAACCTTACTTTGACAACTGCCAGTGATA
TTTCTTTTGTAACTCTTACCTGATTCTCAATGACCAGATCTTTTTCGTCC
GCTTTCACCAGTTCCACCTCAAGCTCGCAAATTTTATTGTTGGCGGCTTC
TAAATCCGCATCTTTCTCTGCGAGAGCTACTTCTTTTTCGCCCTCTTGTT
TTTTGAGAAGCGATGTCAGAGCCTCGACACGGTCATTTAAAGTAGTGATC
TTTTCGTTTTTTGATTGGAGCAAAGCCTGGACTTCCTAtaaacaataata
ataaaattcgTCAATTCCACTCAACCTGATGCTAAATCTGTTGTGaaact
acaatcaaggtcataatattttgataattttggttattttaacgtttttc
aagatttaaagttccggcgagaaagtcgattttgggctatctctttaatt
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttcatcgaatat
ttcaattcgggaggggttggcagacttacaggctatattctgagccttat
tggactatttttgaacttttgaatgctaagatcctaaggtcctcataagt
cttaagtctcttaaaactcagagttaaaactctacccttccaacctactt
tagagcacttacaaatcgcttgtggttcaaaaacttcccggtgtatttcc
cttttttctcaaatattatgaccttgattgtatgtAATAATTCGGTTTGC
CAGTACCAGATGAACACGGCTCTTTTTCGCacaaagtgataaaaaaagtc
GTGTGGTAGGCTAGGGATAGGCTATGACTAGGTCGGCATAATTTTTTCTG
ATGCAATTTTTTCAGGAGTTAGTTTTCTTCTATATTCACACCTCCTTATC
AAGTAAAACGCGCCTTACCTCAATCTTATTGTCACTTTTCTTTTTAGCAT
CTCGAACGTTATTCAATTCAGTGTCACGATTAGCCAATTCCTCGGTTAAT
TCGTTTTGGAAGTTTCTTAAAAATTTCCCTTGAAATTGCAAGGTGTCGCG
GTACTCCGCGTTCTTCTCTCTTAGGCATGAAACCTCTGTCTCGAAGCCCT
AAACATAAAACGAGAGGTGTTGTTGTCTAAACGTTTTTGAATGAACGATT
AAAttaattactctcgggtacctaatagccgtcccccccccNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatttt
tgggaaaatatttttgaaagttatgTTTTTTGTCCCAATtatgctgtatt
agcctccttttcaaaaattttccacccgtttattccaatccccccggcta
ttaggtacccgagagtagttatATTTTTCGGGGTACAGTAATAAGTTTTC
TTTGACTTACCCTAAACTTTCCTCCTAAACTCGTCTACAATACAAGTGAA
GTGCTGAAATAGCTGtcggaaaattttgggaaattttaaaacaaagttaa
aagaaacttcaaatttcagaaatatAAAATGTCATAAGAGGCGTCAAACT
TCATACCTTAATTTTATTCTCGTTCTCGTCCTTGTATTTTTCGAACTCGA
CTTTCCTCTCTTCGATTTGGATTGTTAAATCATTAATTTTGACAtccttt
tgtttgattttagcAGCATACTCGCGTACTTTTCTCCTCTGCTGAAGAAT
GAGCTGTAATTagagaatacacgttttttttttataagaacgtcaaaaat
tttcgaagccttcggttgttcttagttttttggatatgaagcctaaaaat
gttcttaaaatgttcttattttcagcattttttgagcattttgatgtaat
ttcttaagaaaatgcatgtttttaagtcNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTta
agtccccaaagccttagaatgttcttagaatgttcttaaatttttgggcc
tcgaagccttgtgttcttatatagtttgttcttataaaaaaaacgtataa
tggGATATTTAATGCAAAAAACCCAAGAGTAACAAATTGATAAACTCAGA
gaattaatttttcattattgtTTTTTCTGCACTGGAAATAAAACTACCTC
ACCTAAAGTTTGCGTTGCATCTGAAGTACTTAAGAAATATAACGAAGTCA
GACATTGACTCAATTACAATAACAACAATCTTAATTCAAATCCAAATACA
CACTAGCAAAATGATGCCATCTTTCAATAAACATTGTAACATAGAAAAAT
GTCAAAGGAAATATAAATaccaaataataaaatcaaactttgagtAAGCC
TCGTGAtttaaatagaaataaaaataacagtCTACCCATTACCATACCTG
CTTTTGATCATTCAAGCGGGCTTCATATTGTTCAATGCGTTTTGCTTTTG
CTTTCAAGCAAAGTTGGGAGTTGCTTGAGTCACTGGTTTGAAGGATGGTG
GACGCCCTTGGGTGGAGGATGGTGGACGCCCTAGGCTGCAATATTGCAGA
CTCTCTTACATGTAACTGTGTTGACGACTTCATGTGTAAGAGAGTCGAGT
CTCTTTTTTTCAGTATCATGTTTGCAGTCCTTGCCTGCATTATCATAGAC
TCCCGAGGAGTGAGTGCAGTTTCCGATTCTTTGCGCTTGAAAACGGAGTT
GTTAGTTCGAGCCTGTATTTGGCTCGATTCCTTGGCCTTTAAGGCGGTTT
CGGAGGACGAAGCCTGGTCACGGTCCATGACGGTCAAATTCGTATGTATC
CGAATCCTTCGGTGAGTTCTCGTCAATCAAAAACAATACCAAAGTAGTTT
CGTCTGACCCCAATACCAATGAATGAATTCAATCTGGTGATAACCAAACG
ATGCCAAATCAATATCCAAAAATCTGATCCAAACGGCAATTAGCGCGTGA
CTTACTTTTTTGTTGTCGATTCGTCAATTAACTACGAAGTGTTGTTTGAT
AGAATTTTATtggttaaaatttttaattgacGTCAAGTATTGATATTTTt
actatttgacgtcaaatcaaaAGTTTATTGTCGTTGGCATGGCATGGTAT
TGTCGAGGTTTGGTTTTAACGGTGGTGGAGGTGGAGGTGGTTAGATTTTC
TTGTCTTAGACTCTGACCGACTGAGGAGGATACTAGAACAGCTGTCCGTG
ATCTTATGGAAcgtttcaaatcatttcaacaTTCCCaacaatctcgtacc
cagaggcACTTGCATAACCACAGGGGGGAGGACACTCGAGGTAAATGACT
TACCAGAGGAGCGGCACTGAAGGGTCGGTTTTCCAAGATTCAGCTAGTGC
ATTGTAAGATTATGTTTTTACCTGtacctgcactgtaagggtagcaAGTT
ACGTTGTTcctatgaaaattttcaaatggaaTGAATTCTTCCTTCGTAAG
GAAGGAAATTAAACTAAATCATTCAATAGCGTGCTGCTCGCGCTCTTGTA
CATGGGTATATTTCCCATGTGTATGTCTCAAAAATTACCTTTAATTAATT
AAGGGAGGTGTTCCATTGAAAAGGTTTGATGAAGAGAatgatgcactgta
agggtgacAAATTGCGTAGCTtatttctgcactgtaagggtccgattttg
aaagtcaatttttgggCCGAATGGTTGTTTTCAGaacgagtgcccccccc
ccacctccacgtgatgtcttttGGCCAATGAAATCAATAACATCTTAGTG
ATAGGATGAAACTTATTCCAAGACTTCATCCACAAGGTATAGAAGTGTAA
GTTAAATGCTGAATTTGTTTTCTGGTAAAAAACTGCCCGAATTTTGTCTC
TGCGATCACTCcctcaattttttttgtcgGAAACAGCCATTCTGATAATT
CGAAAGTTCATCCCTCCTCACTCATTGATTacgaatatttttctttttag
ggaGAATCAAGACAATTCACAAAACAAAggtaataaaatattttagtttC
AGAGTAAATATCAGTCAATATGATTTTTAGTTTCAATACATAACTCAGTT
AGACTGGACTCGTTTGAAATCTGTGAAGTACAGTAATAGAGTTtttcaac
ctcgtccccgtgtatttcagactttatttacgttacttatggacgccaga
gaatattattagcgctacatgttttttttataagcataacacttataagc
atattaaggctcagatttgcagaattcctaagcataacatgaacatatat
gtcagcctaaaatatatttcaagtggtaatttttatctgtttttgtttca
ttttaaactggtttggtagaggtcaactaaaaaataagacattccacggc
tagctacattccactgctcccaaaatctgaacaaattatttacaaaattt
ctgaaatttcatttaaaaacttggctctgggtgaatcataagcataattc
ttaagcatataataagcataaactatgcctggatgctttgagaacttaag
catacacgagcctgaccaaggagcatacacttgcttataaaaaaaaacat
gtatcagtaatcatcaaaaagctaataatacgcagggaacgaggttgaga
GGTGTTAAATAATGCTAGGCTATAACTCGGGAGACACAGTCGAAAACATt
tctttgtaaaaaatatgtCAATTGATAAGTTCTTTTCATTTGACTACTTA
AGATTACGATCTCTCTAAATAGGATCTTACCGCCCTTCAACAAGCAAGCC
ACCAGCGCCCTCTTCTTCGTCAACGCCTTATGGTGCATCTACGGCTGGTC
CATCAAGACAGCAACAACAAAGCACGGCTGTCACCAAGTTCACACTTGAA
GATTTCGATGATGACGATGAAAGCTTTTAAGAAAGAAATCCTTTGTTGAT
GGTATTTGAAGCAGAGAACGTGTGCTACGTGCCCGGGGGgtgtactaggg
caaaatgggttacggggatgcgccgctggtcagggtatttttttaacctc
cacgaatcccaggtagggtcgaaaaaaaccttttttggaaaatttggggg
aaattATTGAAGAAACGAGTCCCatgtagggtccatttttcgaatctcag
cggagcacccctgttagtcggcaagggtagtatcCCCCCCCCCGGATACG
TGATGGTGTGGTATGCTGTTGATGAATTTCCAATGTATTTATTATGAGCA
TTCGGAACCAAAGGGGATGATATCTGGATTTTGTAATAATAGAATTACAG
TTGCTTATACCATTACATTAAATTGAGGTAATCATGGCTCCTTGTATTTT
CTACCTACTGAAATAGAATAGTACTTGAGGGTAGAGGTCCAATAAAAAGG
GACTATCAAGGTGACTATCAAAGTTGTTTTTTGTGTTCtctaaaactaca
ttttgatggtCTACCGTATGAGAAGAAATGTTTCACTGTAAGACAGGGGA
AAAAAGATCTGGAAATATGAGTATGATTATGGTGCAAGTCCATCAGTTGA
CAATACAGAAGTTTTATTGAATGccttaaatatttttctaatcagaacaa
actatataagaacatgaggcttcgatggctagaatattaagaacaagtca
agCCTTTGCGGACTCcaaaatacccaatttcttagcaaatggcacaaaaa
tactctaaaaattaagtgaaagttgagaacatccgaaagcttcaaaaatt
ttggacatGCAAATTGAGAACATCCGAAAGACATGCAAATTTACTTTGTT
CACATATTATTCTATAAAACATACTTATGTAAATATTGACGCTTatttaa
aacagttttttaagattttgattttaaattgagTAGAATACACCACTTGT
TCAGGATAATTTTGAGTCAAAATGCACTTTGCGAGTCACTCACATAGTTT
TTTGTACTTAGCATGATAgtaatttttgatgaattttcgaaGATTACTTT
TGTATATTTCTAAATTACCAGTttaaatctttgtcaaattatCCTTAAAA
AACGTTTGTAGATTCTTAtgaatttaaaactttaaaaattttgatgatat
taGTATTATTAGGAATTTATGATTTAgttaattttacaaatttttatttt
gtatttatgagttggtagattttttttaaatcgcggATCAAATTCGAACA
AAGAccttcaaaaataattattttattgaGATGTTGTTATTTTGTTGAAA
TGTAACCTCTCTTAGCTTAAAGTCAAATTCAAACAAGTTTATGGACTCTA
ACatgtggggggcgtacgagggttgccaacaccgaaataccgacagattt
ttcttaaatcaccgtaataccgacaaaattttcctaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031645XLOC_031645Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049925-exon-scaffold_167-1491911889:922737..922761TCONS_00049925-exon-scaffold_167-1491911889:922737..922761Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:922737..922761TCONS_00049925-exon-scaffold_167-1510915933:922737..922761Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:922737..922761TCONS_00049925-exon-scaffold_167-1575043694:922737..922761Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:923475..923630TCONS_00049925-exon-scaffold_167-1491911889:923475..923630Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:923475..923630TCONS_00049925-exon-scaffold_167-1510915933:923475..923630Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:923475..923630TCONS_00049925-exon-scaffold_167-1575043694:923475..923630Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:924210..924420TCONS_00049925-exon-scaffold_167-1491911889:924210..924420Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:924210..924420TCONS_00049925-exon-scaffold_167-1510915933:924210..924420Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:924210..924420TCONS_00049925-exon-scaffold_167-1575043694:924210..924420Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:924853..924988TCONS_00049925-exon-scaffold_167-1491911889:924853..924988Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:924853..924988TCONS_00049925-exon-scaffold_167-1510915933:924853..924988Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:924853..924988TCONS_00049925-exon-scaffold_167-1575043694:924853..924988Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:925705..925890TCONS_00049925-exon-scaffold_167-1491911889:925705..925890Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:925705..925890TCONS_00049925-exon-scaffold_167-1510915933:925705..925890Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:925705..925890TCONS_00049925-exon-scaffold_167-1575043694:925705..925890Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:926658..926787TCONS_00049925-exon-scaffold_167-1491911889:926658..926787Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:926658..926787TCONS_00049925-exon-scaffold_167-1510915933:926658..926787Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:926658..926787TCONS_00049925-exon-scaffold_167-1575043694:926658..926787Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:927211..927354TCONS_00049925-exon-scaffold_167-1491911889:927211..927354Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:927211..927354TCONS_00049925-exon-scaffold_167-1510915933:927211..927354Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:927211..927354TCONS_00049925-exon-scaffold_167-1575043694:927211..927354Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:929347..929429TCONS_00049925-exon-scaffold_167-1491911889:929347..929429Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:929347..929429TCONS_00049925-exon-scaffold_167-1510915933:929347..929429Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:929347..929429TCONS_00049925-exon-scaffold_167-1575043694:929347..929429Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:935487..935515TCONS_00049925-exon-scaffold_167-1491911889:935487..935515Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:935487..935515TCONS_00049925-exon-scaffold_167-1510915933:935487..935515Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:935487..935515TCONS_00049925-exon-scaffold_167-1575043694:935487..935515Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1491911889:936259..937874TCONS_00049925-exon-scaffold_167-1491911889:936259..937874Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1510915933:936259..937874TCONS_00049925-exon-scaffold_167-1510915933:936259..937874Clytia hemisphaericaexon
TCONS_00049925-exon-scaffold_167-1575043694:936259..937874TCONS_00049925-exon-scaffold_167-1575043694:936259..937874Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:922737..937874 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049925 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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