|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049968 ID=TCONS_00049968|Name=TCONS_00049968|organism=Clytia hemisphaerica|type=transcript|length=1223bp
aaacaagcgaaaagagataaaaaattgttataatttctgatgtcagaaat
aaaaaatgagagaaatgatgtcaacgcattgttcattttcctttgaaaaa
gtgacgtcacaatgaattttcctaacgacgggcaactctggccagtgtag
gcccgtcgttatgcgaaaagaaccaattgcattgcgcaaaaagccgtgta
gcccgctttgaaaaagtaaccggttaacaattaACGATAAAGCATTGCTT
TAGTCTTAGGTAATGTATGAATCTTTGACAAAGATGATCATATTTTTGCT
GACATCGTTTGGTAGTCAAAAAAAGTCAACTAATCcagatatcaattttt
ttaaactttaggATGGGAATAGATATTACCTTGTTCATTGGAAGGAATCT
TGGAAAGCTGAAAGCTCCCTTATCTACTGCGATAAGTTGATACAACGCTT
CTGGcaagaaagtcaaaaacatgTTGATTTCACATCGCAGACTTCACAAG
TCAATTCGCAACATAGTCATCCACatgataaaaaagaacaatcaccaact
acactctataatagCTTCCAACTATCATCAATCAGTGGTACTAAAGAGTC
agcaaatgagattttgaaCTGTCTTGAACGTGATGTGGTTGCTTCTGAAT
TAGcttcaaagaatgaaaaaatagaGGACGGtgataaaaattatttgaaC
TTAACAACTTCTGATAGCAATCGTGCATTTGACTCAGATCCATCAATCAC
ACAAAATGAGGTGAGCCTTTTACATATTGTTTTGTTGTGCGGTGATTTCT
TTGTGGGTTCCGAATGCCTTAAAATAAGCAGTTTTGGCGGAAAAACATTG
GGAAATAGGAAGAGTACATCGGGTTTTGAATGTAGATTTTTTAACAtaaa
ttcattaaattttctCATGACATCAGAATACTGGGGCTAGTAATAATATA
TCAAAAGACTCAGTAGCATTGCATACGTCTGTATACCTTTACCTCCTATA
CCAAAAAAGGTGGTCTTTTTGTCAAATATTCTGGTACCAATTGGTATTAA
GATCACAAGAATACGCAATTACAATTTTTTATAacagcatccaaaatttt
ttaagcctatggacggatgttcttaatatttttgccatcattgtcttatg
ttcttatatagtttgttcttataaagaaatgtgTACCTGCAATTTCTGAC
AGAATACTCAGGTATGAAAAAAC Run BLAST on NCBI transcript from alignment at scaffold_167:1501297..1502519+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049968 ID=TCONS_00049968|Name=TCONS_00049968|organism=Clytia hemisphaerica|type=transcript|length=1223bp|location=Sequence derived from alignment at scaffold_167:1501297..1502519+ (Clytia hemisphaerica)
aaacaagcgaaaagagataaaaaattgttataatttctgatgtcagaaat
aaaaaatgagagaaatgatgtcaacgcattgttcattttcctttgaaaaa
gtgacgtcacaatgaattttcctaacgacgggcaactctggccagtgtag
gcccgtcgttatgcgaaaagaaccaattgcattgcgcaaaaagccgtgta
gcccgctttgaaaaagtaaccggttaacaattaACGATAAAGCATTGCTT
TAGTCTTAGGTAATGTATGAATCTTTGACAAAGATGATCATATTTTTGCT
GACATCGTTTGGTAGTCAAAAAAAGTCAACTAATCcagatatcaattttt
ttaaactttaggATGGGAATAGATATTACCTTGTTCATTGGAAGGAATCT
TGGAAAGCTGAAAGCTCCCTTATCTACTGCGATAAGTTGATACAACGCTT
CTGGcaagaaagtcaaaaacatgTTGATTTCACATCGCAGACTTCACAAG
TCAATTCGCAACATAGTCATCCACatgataaaaaagaacaatcaccaact
acactctataatagCTTCCAACTATCATCAATCAGTGGTACTAAAGAGTC
agcaaatgagattttgaaCTGTCTTGAACGTGATGTGGTTGCTTCTGAAT
TAGcttcaaagaatgaaaaaatagaGGACGGtgataaaaattatttgaaC
TTAACAACTTCTGATAGCAATCGTGCATTTGACTCAGATCCATCAATCAC
ACAAAATGAGGTGAGCCTTTTACATATTGTTTTGTTGTGCGGTGATTTCT
TTGTGGGTTCCGAATGCCTTAAAATAAGCAGTTTTGGCGGAAAAACATTG
GGAAATAGGAAGAGTACATCGGGTTTTGAATGTAGATTTTTTAACAtaaa
ttcattaaattttctCATGACATCAGAATACTGGGGCTAGTAATAATATA
TCAAAAGACTCAGTAGCATTGCATACGTCTGTATACCTTTACCTCCTATA
CCAAAAAAGGTGGTCTTTTTGTCAAATATTCTGGTACCAATTGGTATTAA
GATCACAAGAATACGCAATTACAATTTTTTATAacagcatccaaaatttt
ttaagcctatggacggatgttcttaatatttttgccatcattgtcttatg
ttcttatatagtttgttcttataaagaaatgtgTACCTGCAATTTCTGAC
AGAATACTCAGGTATGAAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049968-exon-scaffold_167-1491911889:1501297..1502519 | TCONS_00049968-exon-scaffold_167-1491911889:1501297..1502519 | Clytia hemisphaerica | exon |
| TCONS_00049968-exon-scaffold_167-1510915933:1501297..1502519 | TCONS_00049968-exon-scaffold_167-1510915933:1501297..1502519 | Clytia hemisphaerica | exon |
| TCONS_00049968-exon-scaffold_167-1575043694:1501297..1502519 | TCONS_00049968-exon-scaffold_167-1575043694:1501297..1502519 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:1501297..1502519 + |
Blast
The following BLAST results are available for this feature:
|
