TCONS_00050215 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050215
Unique NameTCONS_00050215
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1434

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050215 ID=TCONS_00050215|Name=TCONS_00050215|organism=Clytia hemisphaerica|type=transcript|length=1434bp
TGCAGGATTGGGAGCTTGCAGGTATATAATATGaggTATGAATTACTATA
AAACAAAATGGAATAAGACTTTATGATAAGGTGTCTGTTCTGTGACACTG
GTATAATATTGGTTATTTACAAGGATGTCGAAAAGAAAGACACTTCTAtc
atggcttcaatcctttgcACCTGGTTTCCTTGCCGCTCTTTTCTATGGCC
TGGTTTCTGGTTCCATGTCCTTTCTTAACAAGGTTGTGTTGACAACATTC
AAATTCCATTATCCGGATATCGTGATGCTGGCCCAAGTTGTGCTGACGTC
AATTGTGGTGGAATTGTGCAGGGTGACCAAGATGTGCGACATTCCACAAT
GGACTTGGCAGAGGGGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTGCA
TTACACACGACACTGGCATTGGCTGCTTTAGCAGAACTTTCCATCCCAAT
ATATAATGTTCTGCGACGCATGTTGCCATTGGCAAGTCTTCTAATGGCAA
GATATGTATTGAAAAAGACGCTCTCACGAAAAACTTATGTCGCAATCGCT
TTCACTGTTGTTGGCACTCTTATGGCTGGCTTTGGCGATTTGCAGTTCAA
ATTATACGGTTATGTGGACGCCATTTTGAGTGTGATGGCGCAATCTTTCT
ACTTGACTTACGTTCAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTT
TCAGTTCTTCATTTGAACAGTATTAATTGTATCCTACCGCTCATGATGTA
TACTTTGTGGAATGGTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCA
AAGACTCATCTTTCAACATGTCGTTCATGATCAATGTTTCCATGGGATGC
GTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATGAATTCTGCTCTTAC
GACCAGTGTTGTCGGTGTTGTGAAAGGCGTCATAACGTCCATCATTGGTT
TCTTTACTTTTGGAGGAGTGCCACCCTCCGCCCTTACACTGGGTGGTGTT
TCAATGAACGCCCTTGGAGGTGCGCTTTATACATTCGCAAAATATCGAGA
AAAGCAGATATTGTTGCAGAAAGCTAAGACTGAATTGCCTCTATAATGAG
GTTTTTCATTCTGAtttataaaattgattttagcaaaatttagGTAGGCA
TACCATAAAAATTATGTATAGCAAAATCCTTATTGGAAATAAGAAATGTA
CTTGGAATGTACCATTACCTCTCAAGTATTGTAATGGCGCCTATTTCATG
GGCTTGCTCTAGTTGAAGTTTTCGTTTTTGGGAGTAgctaaccctttaag
tgccaatgtcgatattggacatgggctatataggaggacgaagccctcct
gtaatgcggaaatcgtcatttttggtctaactcgtaggaattggattggg
cttcatggtcaagcaaaaaaaaaattcaaaagNN
Run BLAST on NCBI

transcript from alignment at scaffold_168:99555..111570+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050215 ID=TCONS_00050215|Name=TCONS_00050215|organism=Clytia hemisphaerica|type=transcript|length=12016bp|location=Sequence derived from alignment at scaffold_168:99555..111570+ (Clytia hemisphaerica)
TGCAGGATTGGGAGCTTGCAGGTATATAATATGGTAAGTTTATTTATCAA
TAAAAGAATTGCTAAATCAAGATGCCCTAATCTAAACCCCATTTTTCAGA
ATAAATGGCAGAAACCGTTGAGATCTCCAGGGCAGACAAGACTCTTTTTT
GAGGGACAGGGCAGATTTCGATCAAATTTCAATCTCAGCTCAGGGGACAG
gggcaaaaaagctcaaaatttccctaattttacaaggttttcaaaatttt
tgagcaaGTTTGGCAATTTCAGGGGCAGGGTTTTCAATTTTCCACTTGTG
GGGGTAGCCATGAGATGTTCTGAAAACTGGTGCTAAACCAGCCAATCATT
TTAACATGGGGTGGATTGATTAGATGATTGATGATTGTTGCTCAAATCCA
TCAGttacagtcagggaaatccctcaattgcggtagtaaatttttactgc
aattgcagtataaacgtcaattttacaattttcatacACCGCAATTGCAG
TACATTCAAGAatcagaattcaagattcaaggaaaaaataggcaattttt
gtacataattgatcatatctttttaacgcacagacaaaatattttttccc
tagatcagattcttttaataaagaaaagctttcttctcgtaagatttttt
atagtcgatgtttgtttatctttgtcgaccagcactatatgtagtcgtta
taagcctttgtaggctaaacacgaatgaaaactaccgcaattgcagtata
ccgcaattgagggatttccctgactgagtTAGGGGGATGTTAATCaaaaa
ttcgattgtcgaaccaattgaatactgtgagtggtcctaaatctgacagc
cctgcctaaatctgacgtggtctttcaaagtCAGATAcaatctaaaataa
aaacaaatcttttgctgtgacgcaacgaaaataccaaagtgtcaactaaa
ctgagaaatttgatacagttaaccagtcgaaccaaataaTTAGGAATAAT
CGCTTCTTATACGAAACAtgatttttattgcaatatAGTATGtccaacgt
cataaatgacaacaaaaGTAACTACTTTtcttttacaactcacacttttt
aattataTACATTATTGACATCTTAACATTATAGCCATCtattgttagat
gttttgaatttgttttgagattaacttggagagggagtgtttgtaaacat
agaattcttTTCATAActgttatttggggggtcggaagaAGGCAgtgctg
tcggatttaggaccactcacggtataatCAAGATCAATCAAAGTGATTGG
CCGAGTTGATCACTGAAGTCATTCGAAGTGATCAAGAGCGATCAATCAAA
CTCAATCGGAGTGATACATCAAGGTCCATATTACAGATTTCTCTGTTGAC
AAAGATATTTTTTACTGACTGACTGTtggatatctggcctgtattttcac
ttactgtttaatctctttgacaacaaatttgttatgATAACtcaaccaag
tttatcaatcatactttctgtcgtAACATGCCACGGTAACTTTCACTTAT
AGCGccccctttttaacttttttgttttcattcaaaatggccGGATGCCN
GTCTTCGAcacgacaaaaaactttcaaatttttttattggcattgggccg
ataagtttcagaccccctcccccttgcaCTTATCtgccaaaatttttcaa
aaccaacTTAACTACATcttcaaaaacacaattttgtCCAATCATGTCCG
CCATCGGGTTCGTCTCGCCTTCTCACCTTCTCACCTGTCATCgttgaatt
tttgtctatttgcgccaacattgagtttgttcatacctgcattgatattg
ttaatcaaaacaaaagttaagaATACACTATGAAgttgcaacattttgaa
gtaAACGGCAGCACGTtggccaatgaaaaaagagttttttcatCATAGCT
aattcaaaactgtacttttaaagttgCAAATTTGTGCGCGAAGGTGAAAG
TAAGTGAAATTGTAtatgctttcagtggagtttgtggatgaaatcaaaaa
gaaattggctgaaaagtttttcttcccaatacttgtttttttatcggtat
gtagttgtttcaaaaatatgaaaaattttcaggaaacattggaaaattgg
gaaaactCTCAAGGTCATAGGACttcttgagattttaagggGACCTCGAC
CACCCCCTAATTTGTTTCCCCTAAGATACTTCCTCTAGAAAAGGAAGATG
CTCAAAGGGTTAAGATACCTCTGTaccgaaaaattaagattttagcACTA
AAAggtttttctctattttttatcaaaaattacaaTATACAGTCTTCAGT
TTTTGACGTAATTACGTCAGTTGCCAGTGTCAGCGGTCGTAAGATTAAAT
AAcatatttgtaaatatttttatatttcagtAAGATGTCTAGTGAAACAT
CAGAGAAAACATTGAAGTCCCCTCCAAagggtgatttgaaaataaccaAA
GTATATCTCATTCTGTACAATGTTTCTCTTATCATTGGCTGGGGTCTGAT
CTTTCTAAAAGCAATGATCTACATATCTGAAAAGAACTCTTTCTCTGGAT
TATACAATGAAGTTGAGTTCTGGCTCAAAGTATCTCAAACAGCAGCCTTG
TTAGAGTTATTACACTCTATATTTGGTTTGGTCAGATCATCTATATTTAC
AACTTTACCACAAGTGGCTTCAAGAATCTTTGTCCTTTGGTTTATTGTGG
ATCCTCTCTTAATGCAAGACGAGGTTGCTAAAGAGAGCATTGGATTCCCT
ATGTTGCTGTTTGCTTGGAGCATCACCGAGATAGTACGCTATTCATTCTA
CGCCAATGCATTAATGGATAATGTCCCTTATTCTTTGCAATGGTGTCGTT
ATACGTTTTTCTTAGTGTTATACCCAATGGGTGTCACAGGTGAATTGATT
TCCATTTATCATTCCATTCCATATGCTACCAAGACAGGAAAGTTCTCTAT
CAGATTACCAAACAAATTGAATTTTGGTTTCGATTTTGTTTGGCTTTGCT
ACGTCTTATATCCTGTCTATATTCCTGGATTCTATCATTTGTTTACATAC
ATGCTGCGCCAACGCAAGAAAGTTCTTGGAAAACCGAAAGCTGAATAGAT
ATCCTGTTATAAACTTTTGATATGATTTCATGTGATGAAAATAATGTTAG
AACTTAGAGACTTTTTTTCTTGGAATATTCGCTGATTTTAATATTCGAAA
TTCAAATTCCATTGCTTGAATCATTCCTTCCATCGTCGGTAGTCATAGCA
ACAATtgacaaataaaataaacaggAAAAAATATATTCCTTAGGTATATG
TCTTCCTATTTTTATGAAACTTGATGCTAGGTCTTCCCAGCTTTtttaat
attcttttttcgaaattaacTAGTTAATAAATAAAAGATTTAGAACCATT
TGTATTATTTAGATAGATTATTATGAATtacgatttttattttcttgact
ACAGTACTTATGTTATATGAAACGTGTAACTTATAATTTTCTTGGAGGTG
TCAAtagattttttaattcttatgTTTCACACACACAATTGTGTTTTTAT
CTAAAAAGTTTAAGGTGCTAATAATactattgaaaatgaaaataaaatta
ggTTTGAAAAGattgcaaatattttaaaatgttctttagaAATGTTTCAT
TCGTCGTCTTTCGTGATGTGGACGTTCCTTAAATCTATaaattattagat
ttttttttNGCATTGGATTCCCTATGTTGCTGTTTGCTTGGAGCATCACC
GAGATAGTACGCTATTCATTCTACGCCAATGCATTAATGGATAATGTCCC
TTATTCTTTGCAATGGTGTCGTTATACGTTTTTCTTAGTGTTATACCCAA
TGGGTGTCACAGGTGAATTGATTTCCATTTATCATTCCATTCCATATGCT
ACCAAGACAGGAAAGTTCTCTATCAGATTACCAAACAAATTGAATTTTGG
TTTCGATTTTGTTTGGCTTTGCTACGTCTTATATCCTGTCTATATTCCTG
GATTCTATCATTTGTTTACATACATGCTGCGCCAACGCAAGAAAGTTCTT
GGAAAACCGAAAGCTGAATAGATATCCTGTTATAAACTTTTGATATGATT
CCATGTGATGAAAATAATGTTAGAacttagaaactttttttcttggaaaa
tttcgctgatttttattttgatattcaaTGATTTCGAAATTCAGATTCCT
CTGCTTGAATCATTCCGTCCATCATCAGTAGTCATAGTCATAGTCATAAT
TGACAAATGAAATGaacgggaaaaaatattttccttataatagaaggcat
tttgtaaaatcgctcgattgttttggtcaaagcacttgttatacattttt
ggaaagctaaggtaggggaatcaaaattacttttttttcggacactttgg
tgtgattttcggacgaatatgacggtctcaggcaaaaatcataaggttaa
aaattaatgaaaattttagcttgagaaaacggagacctgttgtatatttt
tggaaagctgtcaaaaaattaggattagagattattgcaagtataggtga
tttctgtacctaactggagatattgagcttcaaaaagcgccaaaactgga
caaaacagctgtttctggctgaaaaacacggttttcaagggttaatatct
cgagttaggtccgaaaatcacaccaaagtgtctgaaaaaaaattggaacc
ttagctttccaaaaatgtataacaagtgctttgaccaaaataatcgagcg
acctcaaaaaaacgaacaaatttccccctactatattaggcaaaaataaa
aaaatgtagcgtttttttatgaaaaaaaattttttttttctatatggctc
atcataaagaaaatcaagttgactgtacaagctatcaaacgtcgtttggt
tagatattcctgcttgtaaatcaagttttgtttgttAGTAGTTgatggca
ttcaaaaattgtgtgaggttttcaaaaacagcaaaaaaaaagaaatttga
atttcctttttaaaaataactcttttcaaacgaaacttcacaATATTAGT
TCTAAAGTAAGTTGAagtaggttgaaaaaaaaaattttgtaaaatgggcc
aaaattgcagcacaaatcaagaaaaacactatgttgataaaacagcagcc
acaaatttgttcaatgggtaaaatattttttcagatgaaactcgtagcaa
aagggtttatccacaaaatatcaaaaatggaaccaaaattattgggtcat
tgggctagaattgtggctcaaagttgacgatttttttcatatatgctttg
attgaagccacatttcaagcccattgaaaaccctgcagccacaaattaaa
cccataagtatctttataaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNttaaaaaatattgaagttttaaagc
aggacagcacatataagccaacctgttgagtgagccacatgacatacagc
cacaaaacctgccctcactttgccatctaatatttcaaaactgagtcact
caacttcaaagagggccacatttttggaaagctcatcaatttccttattt
tatggagttttgtactacacagcagccacaagaatgtcaacaatgtgggc
taaaaagtggttgtgattgaaaacctcactttttggggttctatttttga
atgtaatcagttgatacattagtattcaggcaTTCTGGAAacactgaatt
tttttattttcgccttaggTATTATGTCTTCCTATTTTTATGAAACTTGA
TGCTAGGTCTTCCCAGCTTTTTTAATattctttttctgaaattaacTAGT
TAATAAATAAAAGATTTAGAACCATTTTGTATTATTTAGATAGATTATTA
tgaataatgatttttattttcttgaccACAGTACTTATGTTATATGAAAC
GTGCAAACTATAATTTTCATGGAGGTgtcaaaatagattttttaattctt
atgTTTCACACACAATTGtgttttttatctaaaaagttTAAGGTGCTAAT
AATactattgaaaatgaagataaaattAGGTTTGAAAAGAttgcaaatat
tttaaactGTTCTTCAGAAATGTTGTGTCGTGATGTGGACGTTGCTTATC
TATaaattattagattttttttctaacaaTACCAATCCAAACATCAGAAA
TCTATGTATTGTATGGCATTTCAAGTTATTTTCTAGACCTTAACGGATTA
AATGGATAGAAACATAATTAATATAATTTGATTAGTTATTGAATAAGCAA
TGACCTACATCATCTCCATGAGAACGCCCAACTGAAATGATCAACTtctc
ttattttcttttttagaggTATGAATTACTATAAAACAAAATGGAATAAG
ACTTTATGATAAGGTGTCTGTTCTGTGACACTGGTATAATATTGGTTATT
TACAAGGATGTCGAAAAGAAAGACACTTCTAtcatggcttcaatcctttg
cACCTGGTTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCCATG
TCCTTTCTTAACAAGGTAAGAGTTTGTGCGTTATAATAGTTTTTTCCTTC
ATGATTCTAAAGCATTGGAGATACTTGGCACATTAGAAGTAGTTTGAGCT
ACTTTGGTAGGGTATTTATCTATTTTATTCGAATCTCAAACAAACATAAT
GGAATACAATTGAACATAATCAAAGCTTTCGATTGACACACCGTCTGGAC
CATTGCAATGTcagataaaaacaaaaccccctcTGGTTATTCGAATTAAA
TTCTTATCCCCCCTggagcttcgaataaccgggagtctactgtactttca
atctggcgtttgtgtgaaagCTACACGGGTCACACGTTTTGgattcattt
tttataagaacaaactatggcTGCTGGGGTAGCCAGGGAATAAAAAAGTG
GCTTCATTACGCATCCAAGAGTTTCAAATCTCTAGCACCTTGAAATCTAT
TCATtccttatgttctcatatagtttgttcttataaaaaacgagaATATG
TGATGAGAAAATCGTGTTTGGGTTTTTCACCATAGGTTGTGTTGACAACA
TTCAAATTCCATTATCCGGATATCGTGATGCTGGCCCAAGTTGTGCTGAC
GTCAATTGTGGTGGAATTGTGCAGGGTGACCAAGATGTGCGACATTCCAC
AATGGACTTGGCAGAGGTATAATAAACGGCACACAATTATAAGAGGTAGA
AAATGATATCTCGCAATGGGCTATGATAAAACACTTTAAAGATTTCAGGT
CAGAAgatcttcaaaaaatttactTCGTAAACGCTATGGAAAATATTTCC
TGGACTTGGACTGAATTTTAGGCTTTAGATTAAAATATCGTTTTCGTTTT
AGGGGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTGCATTACACACGAC
ACTGGCATTGGCTGCTTTAGCAGAACTTTCCATCCCAATGTAAGTAGGCC
TTTAATCCTCTTTCGTAAAGGATCCTTTTTTTGTTTGAACATATTCCGCA
AGAACCTTTGCATTAGCATGAAATTgcgattttctttatttctggttcca
acaatatcaaatcaaaatcaaaaatcaagaattgaacTTTATAATCCATG
AAAAGCAAAAGTTCCATTCAATGAAAACATTGACTGACTTTCTCTCTTCA
ATTCGCATTTCTCAGATATAATGTTCTGCGACGCATGTTGCCATTGGCAA
GTCTTCTAATGGCAAGATATGTATTGAAAAAGACGCTCTCACGAAAAACT
TATGTCGCAATCGCTTTCACTGTTGTTGGCACTCTTATGGCTGGTATGTG
ATTATGAACCTATGACTTGAATATTTCTTGAACTCGAttagttttatggt
cccttgcTTCAGTTAAGGATGacttataaatctttttttaataactcgaa
atttccttaacttttGTTCCTCTATGAGTTTTCCATAAACTCCATTGTTG
ATGTAATTATAGTCCAGAACAGCGAGTTCTCGGGTTCTTTAGAAGGGAAC
AAGATGTCATTATTTTAAACAtgaatattaaaatttttattaaaaaaact
ttttaatcacTTTAGGCTTTGGCGATTTGCAGTTCAAATTATACGGTTAT
GTGGACGCCATTTTGAGTGTGATGGCGCAATCTTTCTACTTGACTTACGT
TCAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATT
TGAACAGTATTAATTGTATCCTACCGCTCATGATGTATACTTTGTGGAAT
GGTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTT
CAACGTAAGTTGAAATGATCCATTCTCTCTTTTCAGGAATTCTTTATTTC
ATCTTTTCTTGAGaatagtttaggtataaacaaAAATCAAATGTCTAAAA
TACTCTGAGGCTTTTGTTATGTGATATATGTTctgattgtttttttctga
gcCAATGAGCTTTCGCATAGAGGTGGTGTACCTTTCGGCTCACTCAGCTT
TTTGATGGTGGCAGAGAAATCTACCCTTATCCATGACGAGCCAACAAAag
cgaaattttcaatttttccacACCTTTATTTTTCAGATGTCGTTCATGAT
CAATGTTTCCATGGGATGCGTGTTAAACTATTCGCTTTTCTTGTGTGCAA
CTATGAATTCTGCTCTTACGACCAGGTAAAATTATAGACGATTTTTGTTA
GGACCACTGAAGTTTGGCCTGAGGCTTGTCTTTTCGAAAGTTTTCAGGCT
AATTTAGCTTTATTACTCACCTGAAGAGTGTCAAAAAACTAGGAACCGTC
ATTCACTTTGTCATATTTGAGATCAGACTACTCTAGATTTTCTTTCTAAG
GCGCTTTGGACAAACAAGACAAATTATGTTTACCTTGTATGGNGTACGTT
CAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATTT
GAACAGTATTAATTGTATCCTACCACTCATGATGTATACTTTGTGGAATG
GTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTTC
AACGTAAGTTAAAATGATCCATTCTCTCTTTTCAGGAATTCTTTATTTCG
TCTTTTCCTAAGAAAAGTTTAggtataaacaaaaatattaaatacTCTGA
GGCCTTTGTGATGAATGTTCTGATTGTTTTCTTTCTGAGCCAATGAGCTT
TCACGTAGAGGTGGTGTACCTTTCGGCTCACTCAGCTTTTTGATGGTGGC
AGAGAAATCTACCCTTACCCATGACGAGCCAACAAAagcgaaatttcaat
ttcaaaatttttccacaCCTTTATTTTGTAGATGTCGTTCATGATCAATG
TTTCCATGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATG
AATTCTGCTCTTACGACCAGGTGAAATTATAAACGATTTTTGTTAGGACC
ACTGAAGTTTGGCCTGAGGCTTGTCTTTTCGAAAGTTTTCAGGCTAATTT
AGCTTTATTACTCACCTGAAGAGTGTAAAAAAACTAGGAACCGTCATTCA
CTTTGTCATATTTGAGATCAGACTACTCTAGATTTTCTTTCTAAGGCGCT
TTGGACAAACAAGACAAATTATGTTTACCTTGTATGGGTCAGTGCTTGTT
TTTCTAGGAACAACACCTATCACTATAATGCACCCCCGCCCCACTTTTCT
TCCCTTCAACTATTCTTCCCTTCAACTATTCGATCACATTCACATACTAC
GTACGCACTGAGGGGAAAGTAGCCCATTTTTTTGCATGTAAAATTCTGTG
AAAGAGATAAAGAGTGAATTGCTGTCCTCGCGAAATAATAAGCGACCTTA
AACAAATACATttcatttttgtgtttttgactGCTCATTCTCAAtgcaaa
aacataaaaagtttctaattaagttgtctttttgaaATATAGGCCCAATC
CAGACGATtgcttttcaatttcttttcgtTAGGGAGTGGAAAAAGTACTT
ACCAACAAGGGGGTATAGGTGTATATACGTTCGCTTGCGTACACCTCCCT
TCGTGTAGTAGAGTAcacgatttttgaaattttgtacgTACGTACTATGT
TGACGGACCCTTAATGCAAATGATTAACCTGAAGTGATTAAAATACTCAT
CGTCAATGAATACAGTGAACACTTGATGGATTCTGAGAAGTCTTTTTAAT
TAATTCGATTTTATTTAATCTTTAATTGTTCTTTTCAGTGTTGTCGGTGT
TGTGAAAGGCGTCATAACGTCCATCATTGGTTTCTTTACTTTTGGAGGAG
TGCCACCCTCCGCCCTTACACTGGGTGGTGTTTCAATGAACGCCCTTGGA
GGTGCGCTTTATACATTCGCAAAATATCGAGAAAAGCAGATATTGTTGCA
GAAAGCTAAGACTGAATTGCCTCTATAATGAGGTTTTTCATTCTGAttta
taaaattgattttagcaaaatttagGTAGGCATACCATAAAAATTATGTA
TAGCAAAATCCTTATTGGAAATAAGAAATGTACTTGGAATGTACCATTAC
CTCTCAAGTATTGTAATGGCGCCTATTTCATGGGCTTGCTCTAGTTGAAG
TTTTCGTTTTTGGGAGTAgctaaccctttaagtgccaatgtcgatattgg
acatgggctatataggaggacgaagccctcctgtaatgcggaaatcgtca
tttttggtctaactcgtaggaattggattgggcttcatggtcaagcaaaa
aaaaaattcaaaagNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031814XLOC_031814Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050215-exon-scaffold_168-1491911889:99555..99587TCONS_00050215-exon-scaffold_168-1491911889:99555..99587Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:99555..99587TCONS_00050215-exon-scaffold_168-1510915933:99555..99587Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:99555..99587TCONS_00050215-exon-scaffold_168-1575043694:99555..99587Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1491911889:107121..107319TCONS_00050215-exon-scaffold_168-1491911889:107121..107319Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:107121..107319TCONS_00050215-exon-scaffold_168-1510915933:107121..107319Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:107121..107319TCONS_00050215-exon-scaffold_168-1575043694:107121..107319Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1491911889:107840..107970TCONS_00050215-exon-scaffold_168-1491911889:107840..107970Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:107840..107970TCONS_00050215-exon-scaffold_168-1510915933:107840..107970Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:107840..107970TCONS_00050215-exon-scaffold_168-1575043694:107840..107970Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1491911889:108157..108243TCONS_00050215-exon-scaffold_168-1491911889:108157..108243Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:108157..108243TCONS_00050215-exon-scaffold_168-1510915933:108157..108243Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:108157..108243TCONS_00050215-exon-scaffold_168-1575043694:108157..108243Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1491911889:108470..108597TCONS_00050215-exon-scaffold_168-1491911889:108470..108597Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:108470..108597TCONS_00050215-exon-scaffold_168-1510915933:108470..108597Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:108470..108597TCONS_00050215-exon-scaffold_168-1575043694:108470..108597Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1491911889:108870..109108TCONS_00050215-exon-scaffold_168-1491911889:108870..109108Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:108870..109108TCONS_00050215-exon-scaffold_168-1510915933:108870..109108Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:108870..109108TCONS_00050215-exon-scaffold_168-1575043694:108870..109108Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1491911889:109391..109479TCONS_00050215-exon-scaffold_168-1491911889:109391..109479Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:109391..109479TCONS_00050215-exon-scaffold_168-1510915933:109391..109479Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:109391..109479TCONS_00050215-exon-scaffold_168-1575043694:109391..109479Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1491911889:111043..111570TCONS_00050215-exon-scaffold_168-1491911889:111043..111570Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1510915933:111043..111570TCONS_00050215-exon-scaffold_168-1510915933:111043..111570Clytia hemisphaericaexon
TCONS_00050215-exon-scaffold_168-1575043694:111043..111570TCONS_00050215-exon-scaffold_168-1575043694:111043..111570Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:99555..111570 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.89375	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00050215 vs. Swiss-Prot (Human)
Match: S35D3 (Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.463e-32
Identity = 88/296 (29.73%), Postives = 156/296 (52.70%), Query Frame = 2 
Query:  173 GFLAALFYGLVSGSMSFLNKVVLTTFKFHYPDIVMLAQVVLTSIVVELCRVTKMCDIPQWTWQRGKEFLIPSLCFXXXXXXXXXXXXXXSIPIYNVLRRMLPLASLLMARYVLKK-TLSRKTYVAIAFTVVGTLMAGFGDLQFKLYGYVDAILSVMAQSFYLTYVQKTGIEKGASALSVLHLNSINCILPLMMYTLWNGSLLQAARFEGFKDSSFNMSFMINVSMGCVLNYSLFLCATMNSALTTSVVGVVKGVITSIIGFFTFGGVPPSALTLGGVSMNALGGALYTFAKYREKQ 1057
            G   A+ +G+ SGS++ L K +++ ++F +  +V        ++ +EL R   +  +P +     + F   ++   L ++L L +L  LS+P+Y V +R LPL ++L+   VLK    S     A+  T  G  +AG GDL     GYV  +L+V+  + YL  +QK   +     L+  ++ +++    L++ +  +   + A  F G+KD +    F+  + +GC +N++   C  +NSA+TTS VGVVK + T  +G   F  V P++L + GV +N LG  +Y  AK+ E +
Sbjct:   11 GISVAIAHGVFSGSLNILLKFLISRYQFSFLTLVQCLTSSTAALSLELLRRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAWTFPGWKDPAMVCIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVAKFMETR 306
The following BLAST results are available for this feature:
BLAST of TCONS_00050215 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35D32.463e-3229.73Solute carrier family 35 member D3 OS=Homo sapiens... [more]
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