TCONS_00050224 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050224
Unique NameTCONS_00050224
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2382

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050224 ID=TCONS_00050224|Name=TCONS_00050224|organism=Clytia hemisphaerica|type=transcript|length=2382bp
GTAAAAACATCAGAAATGTTGTATGTTGACATCAATGTTTGCAGTTACAA
GAATATTGTTCCATGTAAAATGTGAGTGTTGAAGGAATCATTTTCTACAT
ACCTATTACACCCTGCTTATTACACCATGCTCAACCAAACAGACAAAGAT
CaattcaaacagaaaaacaaTGGTAAAAACATCACCGAAAAAATGTCGGA
TGTTTTGCTCGATTATTTGGGAAAACCTTTACACGAGTTCATCGAGTTTT
TGAAAACCAATCACAGCCGACATTGCGTCCCATCGAGTGTCTCAAGTGGT
CTCGCTAACCTTCCTTTGAAACGTGTGTGGCTTGACCAAAAAGAAACTGA
CATCGAGACAACACAGAAACTTCCGACCGGTGAGACATTGAGCGGTCCAA
AATCTTACGAGATGATATTACCGTATTTTACGACAACTAGACAGTATAAT
GCTCGTAGTATTTACGAGTTAGGTGAGAAACAGAGGGAGAAATTATACAG
ACGTGCTCAACAAATTGCTCGCAAATTAATGAATAAAGATATCAACCACA
CAATGGAAGCTGTAGACGAGTTTAAAGAGGATTTAAATCACCCCCGTCAT
TTTTTCAACACAACAACCATACCAGGCAATGAAAATGGAGCAATCGGGGG
GTCCAGGTGCAAAAATATGGAAATGGCTCGTAAAAATTGTCCTGTACGTT
ATGAAGCTATGCAACTATGGTTCGCATACGCACAACAACTTATGGCGAAG
TTAGATCCCCTAACTGTTGATATGTTCTATATGGGCGGACCCCGCCTGAC
CACGCCCATTTGTCCTGTGAAGATGATTGctaaattcaatccgtcatcgG
GATCTCAGTCTTACAGTGGGGGTGGTATGAATTGCAAACGAGCTTCACAT
TACAAACTACCATTCTTTCTGAAATTACCGGGACCGAAATATAATGCGTT
TTCGGTGGCAGGACATGAGACACGACCTGGGCACCATACACAGGTGCAAG
GTTTTAACGAACATTTCTCATCCAGTggaaataatgacgtcatcgattgg
TTGAACACAATCACCTACTACACAGCATTCACCGAAGGTTGGGCTTTGTA
CGCTGAAAATCCTTTGCTAGCTACCGAGACAACTTTGTATAAAGACGAGC
CATTACAAGAATATGGTATGCTAAAATGGCAAATATGGCGCGCCTTGAGA
TTGGTGATTGACACGGGACTACATTCTAGAGGGATGGATATGCATCGTGC
ATTGGAATTATTCGAGATGTTTGCATGGGACACCACAGATAAATCCTACA
AAGACACTATCCGGTATATGAGTGATCCGGGACAAGCTACCGCATACATG
ATTGGTCAACTAGCCATTTGGACCATCCGAAAtgaaacagaaaatgtttt
gagagaaaatggcatcatatttgatgaaaaagaattcCATTACCAAATCT
TATCACAGGGCTCATCACCGATTGATTACTTACGAAGTTACATGAAAGAG
TATCAGAAATGTAAGATCGATACAAAAGCAAGCCCTGATTGTGCTGAAGT
ACTGGAACCGAAACAAGCCAGCCAATCAGAAGGCAAGTTCAGGACAATAG
GAACAAAAGAACGTTGGGAGAAATTCAGGAATATACAGACGCAGCGGAGA
GAACATCACGAATAATTTCTATGAAAGAATAtgtgaacaaaatattttca
tgatgGGGCAAGACCAACAAGGTTCATGAATTTCTACCTATTCAATACAC
TTTGAGAATTTATGTTAATACTCTCAGGTGACTTTAGTTACCTGCCGATT
TGTAATATAattcttcactttttgaccaTCCAGACCTTAAATGTACCCCT
CCCCTGAattaatgtttgaaaaaatttcagctATAAGAATAAAAGCTTTG
TTGTCAAAACAACCTGCTTTCATTTACTCTATTCTGATCAAGTGTCAgga
gtacaatttccaaccgtAATGAGAAATAACCCCTCTTTCATTTGGCTGTT
GAAAGTACATGGAAACTATAGTAATAAAGTATAAATACTACGAATTTGCA
ATCCGTTGCGAGATTTTACCAACAGGAATAGAACACAAGACCtcaaatga
acaaaaatttatGGAGCGATTCAACCATTATGAATCAGTCTCATTCTCTT
AGCAACTTGCGTCTCCTTTTAATAATTTAGTTGATTTTAATGTTAATTAT
ATATATTATTATAGATTTGTAAATAGATGAAAAATTGTGAACTTTTGGGA
ATATTATGAATCGTTAACGAAGAAGAAAGTTTTTAAAGCTATAAAACAGA
TAATTTCAAAcacaatttaatttttcagataatttcaAACACAATTTAAT
TTTGCCTCGAGCCAACAAACCTCTAATTATGC
Run BLAST on NCBI

transcript from alignment at scaffold_168:210473..223166+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050224 ID=TCONS_00050224|Name=TCONS_00050224|organism=Clytia hemisphaerica|type=transcript|length=12694bp|location=Sequence derived from alignment at scaffold_168:210473..223166+ (Clytia hemisphaerica)
GTAAAAACATCAGAAATGTTGTATGTTGACATCAATGTTTGCAGTTACAA GAATATTGTTCCATGTAAAATGTGTAAGTATCTGCTGGTATGTGCTGGTA TAGTTACTATTCCCTTTTATACCCTGTCCCAGTGAACAAGTCAAAGAAAT CTTTACCCATTGGGGATAAAGGAGTTAAATGCCAATGGGGACTTCTCGGT AATTCTCAGGTTGGGTTTTTCTTAAAGCTAGAAGAATAAAATAAGGATGA TTAAAATTCCAGTGTTTCTACAATGCGAAATATAGTTATAGAAAAATACT TCCTTAATGGTTTGAAGATTATAGTATTTTCTTCTGggtttaaaaatatc aaatttcgcATTCTACTCAATCTTCTCCACTCTAATTTTCATAATTTGGA GCAGCCCAAATCTATCATATCCAAAACCTAGATTGTGCTCGTCAAATACT GTTTCATCCTTCTTATAGATACTAGAGAGCGATATGTACTATTATCGAGT tgttaaacgtttttttttcacGTGAACGTCAAGGTCGTGTCATAGGTTGA GCCCCGTCCCCACTTAAAAAACTGGACAGAAAATCGTCCCGGTGGATCTA AAGCCCTAAAATTTCATTCCCAATGAGGAACTTCCATACCCATTTGCGTT TTTACGCtggaaaaaaggttttcttTACCTATTGAGAATTCCCACTGTAA GAAGAAAGTTTCAACGGCGCACTGAGACAGGGTTTTTTAAAATAGCGTTC CTATTTCCTTAGAATCCTCATAGCCTTAAATTGTTCCTAGaatgttctca attttttttcgcaTCGAATCCTAATTTGCTTGTGTTTAATGTAGTTGAGT GTTTTTCCGAGCTTTACCTGGAGAAATggaaaattcgatatttttatttg aagcaACGACAAAGACCTAATAGATTAAGAGATAGAGTATTTATTCCTTA AAAGGGAAATTCGAAGAAGCCtgtcaaaattaaatcaattCGAATTTTGT TGAATCTGAcctcaattttgaccaattttgataaaaaaaggaaactttAT CAATATAATCACGTCACAGACGTTTTAGAGACAAAATTTAATTCTTTTTG ATCAAAGAAACAGTGAGAAAATaacacaaaaaaattacaagTCATGAAAA GGTTAAGAGACAACATTTAATCGCATAATAGTTTGTTCAACGTCAAAAAA GATAGATTTGTTGATGAAGAAAAATCTTTCATCTCGAGTTTGGGTTCTGA GCGACTTATTATGGGATGCAAATGATTCAATGTAACATGTCGATAAAAAT ATGCTGGAAAGAACAAAGGGTTCGGTATTGAGTATTGAATGACCATATAG TCTCTCCTAGttcgattttcaaaggaaaTGGAAACGCAAGGGCTAAGAAA ACTGGGATGTCATCTTTATTCGATGTGCAAGAAGTCTAtacacggttttt tataagaatatcttctagaagaatccgggggggggggacttaggcaaatg gagggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNATGTGCACtcaactctcaaattgatcatttctctaTTA ATTAGAAGtgaagtctaaaaaagtaagaatacgttaagaatatttccatc tcaattttggaaatttcttaagaatacgtaaccctcatccaaagtacagt attcttataaaaaagcgtgtatattgATTTATagagcaggggggggggca gggGAGGGAAAAAAGCAAGAGTCCATTCGTGTCAAAGCGAATTTGGACAA ATATTGAAGGTCTTTCTGAAAAATAATGTTCTTCGGGGAAAAAAAGCTTC CTGAATTGTAAAATGAGCAATAGAAAAACTTCGTCACTTTGATTAAAAAA ACGGGAGTATATAGAATTTTCGAACACCAGATTAGGGAGCGTAAACTGTC GTGGATGGCCTTCATTTCTCCAGAATTTTCACTTTCCCATTCCCTCCCAC CAACCATCCATTGCAGGTCTTACAACCAGGATTTGATTTGGCCTTGCCTT TTATGGTGCATTTTAAAGGACCCTTACATCCCCTTGTACAACCCCCTtga caggagaaaattttcaGCGAAGAAATTCAGCTAATAAAATCGGTAAAATT AAACATGACCTCCGAGAGCATTCTGAAATCAACTATCAACTATAAGATGA AATCAAACGCCTAATCCATTTCCCAAATATGTTTTGGATAATGTTTGGAG AGCTCGGTTAATCTGTTAAATATATTTAcccatcaaaattattttttgat tatctttttattatgagaaaaagataagatcaaaaagaatttttgaaata tctcaatATATATTGGAGTGTGTCGTTGTGGAACTCGGTATTCTTGTTAT TAAAgggaatattttaggatgatttttaaATCGACATAACCCCCGGTACA AGGGACAAAACTCTCTTAAATTACCAATAAACAGGGGGTTAGATGTAGTT ATTGAGACATCTATGAACAGGGCTTCTTTGCCGTGGAAAAAAATGCAGCA ATGCGTTTCTTTACAACTGGTTTTTGAGTGGATTTGGGATTAACATCATG AATTGTTGAAATAAGTAGAATCAATGTGATTGGATTGGCGGATAGTTGAC CTCTTATTTAGTAAAATTTCACTTGACTCAACATCCATATAATATTATTT CAACATCTATATTAGACATTACGGATGTTAGAAGGACGTCTTATTGACGT ATGACAGGCGTATGGCATGGAACCATGGTGACATTTTTGTGGTTCGGTTC ATTTCCCCAAACAGGATGGTTCACATCCACGTGAGGGCTAAaatgttttt gtgaaaaatgtCTAAACGGTAAAATGTAATGTCCTTGAGGGGGAAAAGAT GCGTTATAAACTTTAAACtctcaaaaattctaaattcaaATATTAACGAA CTGTTCTGATTAATACAGTCTTTATGGTCCTCTGTTTTAGAGCATCTGTT TACGGTGTATAGGGTGTGGGTTGAATCCTCGTCGGGTTTTATAAGTCTTG ATGCCTCTACTGCTTAGCGTTTAGCATTTAGGAGAGTAAGTTAGTGGGAT AAGTTAGTTATAATTAGATCTTGAATTTGATCCAGTAACAGGCCcagcgg aagcggggagactggggagacttcagcctctacacttttgagcaaatgag atttttttctcaaattcctggcgaattttatctcattatTAAAGgtcttc agcctccccacttttacggttgttccgctgGGCCTGAGTACCTGAAATTT AAGGCAGTTTTGAAACCTGGAGACTGGACAGCGAGTCGGCCTGTGATTAC TCAAAACTTTAGCCCTTGAAATTGATTCAGTTGACTAACCAGACCTTACC TTTAGTAATTATGGTTTTTCATAACTtataatttttaacaaaatgaaATC CTTTTTTTGCATTATATACAAGGTGCGAAATCAAATcatctttttatatt ttaggtcaatttttgtaaaaaaaggacaaaaaaaaCACGCAAAGTTTGGT GTGAAAACAAATAGGACAAagtaaaagaattgaaatttaatCCGACCCCG AATTATTATGACTTtaacaaaacacacaaaaaatgCAGCAACACTCAAAT GTTCCATTATTAAAACAAGACTCTACGATAGAGAAGGACACCAATCATTT GgtgcaaaaaacaaaaacagacaaTTCTGGTCATGAAGTAAAAATAATCA TGCTTTTAAAATCTCGTCGTCAGTATTTATTTGTCGTCGCCAGCGTCGCC GTTCTTACATTAATCGGCGTCATTATCTTAGCTGTTGGGGTATACAAGTA TACAGCTAGTACCCCCGATTGCCCCACGAACTACGATCGTATTAATTTGG GGAAGATTTTACACCAAACTAAAGACGATTATTATCGGTTATATCCGCAC GAAGTTTACGAGAATCCCGATTTAGAGGAGCAAAAATATGTTAATAATTT TGTGCCGTATGATCCAAGTTGGAAGACAATAAAGTTGCGGACTGATCATG CTTTGAAGTTACGGAAAGACTTGCGCGATTACGATATCAAAACTTCCAAT TTACGACCGCGCGAAAAGAAAGCGTACGCACAACTTGAGCATTATTTAGA TTCCATTTTTGGGAACCCTTACAATGAGAATTACTACGCAGGAGATTGGA TGATGGGCCCAGATTATTTTTGTTGGCAAAGCATGTGTTATGTGGCACAA AGCCTGAGATATCATTTTAACCCTGAAGATGGCTTCATACCAACTAAAAT CGCAGATGTCGAGAAAATCATAGAAACGATAAAAAAGATGAAAGATTCTT ACGGAGTTTACCGTGAAAATATCGTTCGTGGTGTACAGGCTGGAATGGTG AGATCGGTGGAGGATTGCCAGGCTGGTTTGGATTCTTTCACTAATAAATA TCCGAACATCGTTGACCAAGGAGCTAAAGGTAATataatatattaaaaaa tattttcaggttgAGTTCCAAGTGAATCAATAGTTTTatgggaaaaactt ttttgttctGGATGGCCGATACATTCATCAAAATCAACAGGAAAAAAAAC ATCCGTGCAAGTTCCTTGCAAGTTACCCTCGAGTAACACATCACTGTTAA AGGGTAATGACCCTCTACTTTTTTTTCCAAGAAAAGGTTTTTCGAAAGTT TAAATCCTTTTAATTCTTTAATTAAAGTCATGTTTTCAAAGAGAGGTTAC TAGCACTTTCAGCCTCACTTTCAAAGATAAGTTCAGTTCTTCTAACTGAG GGTAATGGTACGATATGTGATTAAATGTAAAAGCTTGTTTCGAATTAGGA agctttcaagttttcttatgagaacattaatttttttcaagcatTCCTTA TAACAAAACAACTTAGAGGAACGCTTGGAGCTTAAAACAACTGAGGTATG TTAGATTGTAGTTGTCAATCTTTCTAGAATTTTCAGAAACTATAAAAAAT ATCAGCAGCGAAAAGCTTTAAGGAATTTCCTGCGGTTGGTTTGAGTGGCA GATTATTGGCTGATCCgtaatgtaaacaaaatttctCGTATTTCAAGGTC TAAAAGTACCCATTTTCGAGATACATGTCTGGGGTAGGTCATAAGAGCGA AGATTTTCGTTTTTAATAAATCTATTTCTGGCTTGCCGAAACGAAACTAA GGTTCTGATTTGTGATCGGTTTCCTTTAGGGTgattttttgcctgaaaaa tggttTTGAACTCAAAGCCAGGactttattagaaaaatatttagatatgt tagaaaatatttttgtttctagcttttcagcatattttctagatattcaa aattagttttcaacCCCGGCAATTAGGTTCGCCgttaaattttaaatgaa tttttcgAACCCTTCTCATTTTTTTGGCAGCTGAGAGTATTAACCATAAG AGATACCAATGCTTTCCTCCATTTAAGCGAGTCAGAATGAAAAATTAGGT TGTCGTAGAGGAAAGCCATATTGcgtaatgtttttaatcattcgctttct agtttttttttctcaacatTTTGATGTAGTGCAGTAAATAAACAGAGAGC TGTCATCCTCTTGAATAATCATTTGCTGATCAGGTTTCAGTGACAGCAGG AGACTTTTCAATGAATCTCTTCGTATTGATTTATAGCATGTATGTAAAAA ANCTAAGGTTCTGATTTGTGATCGGTTTCCTTTAGGGTgattttttgcct gaaaaatggttTTGAACTCAAAGCCAGGactttattagaaaaatatttag atatgttagaaaatatttttgttcctagcttttcagcatattttctagat attcaaaattagttttcaacCCCGGCAATTAGGTTCGCCgttaaatttta aatgaatttttcgAACCCTTCTCATTTTTTTGGCAGCTGAGAGTATTAAC CATAAGAGATACCAATGCTTTCCTCCATTTAAGCGAGTCAGAATGAAAAA TTAGGTTGTCATAGAGGAAAGCCATATTGcgtaatgtttttaatcattcg ctttctagttttttttttctcaacatTTTGATGTAGTGCAGTAAATAAAC ACAGAGCTGTCATCCTCTTGAATAATCATTTGCTGATCAGGTTTCAGTAA CAGCAGGAGACTTTTCAATGAATCTCTTCGTATTGATTTATAGCATGtat gtaaaaaaattaatcgactTTCAAGTAAAGGGCTAGTCCAATATGAGCAG CCGACAACCATATTCTCCTACACCAGGAAGACTGGGGTTAATGATCCTTA ACATAACGACATATTCTTAAAATTCATGTTTCAAGTGAGACATCAATGAA CAACCACTAGGATCTCCAAGAAAACACGTGACTTCAGTTATCCAATCATA AAGGTGCCAGCATTTAGATTGATAAGGGCTAGAAGCACGGCTTTGTTGAT AAACACAATAAGTAAACACTGAAATAATAGGACTCACGTCAATCATAGTT CAtattataactttttgaaaacaaacctaTCAATCCTAGGAACCAATAAT TTCGTAAATTTTGGCTTGGGGACTAAAATTaggaccgactaaaaatttgg gccgactaaaaatttagaaatggccaaaacttaattattagttggccctt agtgactaaaattagggccgtctaaaattaaggccgactaataattaagg ccgattAAAATTAAGggcgactaataattaaggccgactaataattaagg ccgactaataattaaggccgactaataattaaggccgactaataattaag gtcgactaaaattaaggccgtctaaaattaaggccgactaaaattaaggc cgactaaaattaaggccgtctaaaattaaggccgtctaaaattagggccg actaagttttggccaatAAGGTAGTTTATTCTCATAAAATAACGAAGAGC TACGCCAGCGGTCGAAGACctccaaattttttactttcggTTTTCGCTAA CGGCCAAATACCTACGAATATAATGTGATATGATACGACCTACAAAACCA GAATTAACTTCTTGTAGTTAGAAAAATATGCTGGTCGATTTTGAAATAAT AACCGTTCTCTTTTGTCTTAATTGTAGGAGTGTTGAAGGAATCATTTTCT ACATACCTATTACACCCTGCTTATTACACCATGCTCAACCAAACAGACAA AGATCaattcaaacagaaaaacaaTGGTAAAAACATCACCGAAAAAATGT CGGATGTTTTGCTCGATTATTTGGGAAAACCTTTACACGAGTTCATCGAG TTTTTGAAAACCAATCACAGCCGACATTGCGTCCCATCGAGTGTCTCAAG TGGTCTCGCTAACCTTCCTTTGAAACGTGTGTGGCTTGACCAAAAAGAAA CTGACATCGAGACAACACAGAAACTTCCGACCGGTGAGACATTGAGCGGT CCAAAATCTTACGAGATGATATTACCGTATTTTACGACAACTAGACAGTA TAATGCTCGTAGTATTTACGAGTTAGGTGAGAAACAGAGGGAGAAATTAT ACAGACGTGCTCAACAAATTGCTCGCAAATTAATGAATAAAGATATCAAC CACACAATGGAAGCTGTAGACGAGTTTAAAGAGGATTTAAATCACCCCCG TCATTTTTTCAACACAACAACCATACCAGGCAATGAAAATGGAGCAATCG GGGGGTCCAGGTGCAAAAATATGGAAATGGCTCGTAAAAATTGTCCTGTA CGTTATGAAGCTATGCAACTATGGTTCGCATACGCACAACAACTTATGGC GAAGTTAGATCCCCTAACTGTTGATATGTTCTATATGGGCGGACCCCGCC TGACCACGCCCATTTGTCCTGTGAAGATGATTGctaaattcaatccgtca tcgGGATCTCAGTCTTACAGTGGGGGTGGTATGAATTGCAAACGAGCTTC ACATTACAAACTACCATTCTTTCTGAAATTACCGGGACCGAAATATAATG CGTTTTCGGTGGCAGGACATGAGACACGACCTGGGCACCATACACAGGTG AGATCAAACCTTTTTTTAACATTGAgcaccttaagggaactaattttggc gagaactaattttgacgagcggcaaaaatcctgaaaatttttaattttgg cgattgatgatttttttttatatttgcgggaactaattttggcgaatgac agcataaatctgttctattttggcttatttgaagcttttttctGTGAACT CAAGATGTTATTTcggcaaaataccaaaaaatttaattttggcaaaaact tattttggtgagtgaacaaaatgtttaattttggcgggaactaattttgg cgaattttgtctaaattcgccGAGTTCGCCTAAATTAGCTCCCTCAAAGT AGTCGTTCCATAATTGTAGCTAAAGAATGTGATAAGCGGATACTGAAAAC TGAACTTCCAATTGAACTTGAGAAACTTCAAATTTAATGGGAGGTCTGAT CCAGTCAATTATTTAAAGATCAGTGTTGGAGACAGATAACATAGACAAAT AAGTTCTCTGGCTGATTCACGAACCTTGACTTTGGTGGGGCTGTATCTTC TTTCAGAAAATTCGACGAGTGTCTCCAAATCTAGAACTGATATGAATTAC TTCTTTCACCGTGTAAAATTTTGACATTCGCATTTTAGGTGCAAGGTTTT AACGAACATTTCTCATCCAGTggaaataatgacgtcatcgattggTTGAA CACAATCACCTACTACACAGCATTCACCGAAGGTTGGGCTTTGTACGCTG AAAATCCTTTGCTAGCTACCGAGACAACTTTGTATAAAGACGAGCCATTA CAAGAATATGGTATGCTAAAATGGCAAATATGGCGCGCCTTGAGATTGGT GATTGACACGGGACTACATTCTAGAGGTAAATTAATGAAATTTGTCGAGT TTGGTTAGGGTGGGGCACTCTGaggatggccaaaaaattaagcaaCTTGG CCTTAGCAACTCAGCCCTGAAACTGAGCAGCAACTGGGAAAGCAATTAAA AATACCTAGAAAAGAGGCATTTTCGGCATTATTTAGGGAGCACCAATGGT ATTTGAATACCAAATCTATCTTGGacaaaaaaagtcaaagtttgaagttg ctaggcatttttggctcaaaatccATAAGCAACTTTTGGGCAACTCAAGG CACCTTTGGAACAAAGCATTTTTGCTTCATCAGGCAAAATGTTTGTGACG GGCTTTATTCATCAAAATTCACCGGCAACCTTTATCTTGCAAGGTAGATA TAGATGAACCTCCAAACAAGTATATCTGAAAAGTGGAGACTATGGGAATT TTTCAACGAAAGTAAATTAAGTAAAGGAAAGTATCGAGATCCTACACACC ACTCTGGTCTGTGCATTTTAGCTCATTGTATTGGTTTGTGTTTTTACAAC ACTTAGGGATGGATATGCATCGTGCATTGGAATTATTCGAGATGTTTGCA TGGGACACCACAGATAAATCCTACAAAGACACTATCCGGTATATGAGTGA TCCGGGACAAGCTACCGCATACATNTACAGATAAGTCCTACAAAGACACT ATCCGGTATATGAGTGATCCGGGACAAGCTACCGCATACATGATTGGTCA ACTAGCCATTTGGACCATCCGAAAtgaaacagaaaatgttttgagagaaa atggcatcatatttgatgaaaaagaattcCATTACCAAATCTTATCACAG GTTGGAATTAACATTTTACTTATTCTTTCTGTGTGATTTGCTCCAGttga cgttctctaattcgatgttttattattcgatacgctccataaTTCGATAG TACTGAAAGTCACCTTAAACAAATAACTGTCATAAACGCAATCTACTATT CGAGACACTGCCTCATTCGAAGAAAATCCAATTTCCCttgaaattcgaat tagagagcgtcaactgtatcttACTTCAAACTTTATACCGGTGTGAATAA GATAACCCGGAGAACGGCTAAGGTGTCGATCTTCAAATTTTACATTTGCA TAATCTGGCACTAGTTTTTTCAAGAGGGCTGGGTACGGGAGATCAGTTGA AATTGTGTAAGTTTGATAGTATTATTGTGCAGTACCAGTTATGGATGATT AAGGGTTTGTGCATTGAAGGGAGAATCACAGAAATACATAATTCTTGTCC GAAAAAAAGGAGACTTTCGACTTAAATAATTCGATTTAGTTTGAAGACTT CATTACTCATCTTTAGTAGTGGATTATGACGTTCTAATGTTAACTTTAGT TTATGATGCCATGTTTTGGTTgcgttttgtttgtttgttatcaTTCACAT TGATCCTTTGCATTCCcatttcaatgtttattttcgATTTCTCCCTTTTC TTGGAAGCATTTTCTGGCAAAGGCACTATAAAAACTTATGACATaaattt tgtttactttgttaCCTCAGGGCTCATCACCGATTGATTACTTACGAAGT TACATGAAAGAGTATCAGAAATGTAAGATCGATACAAAAGCAAGCCCTGA TTGTGCTGAAGTACTGGAACCGAAACAAGCCAGCCAATCAGAAGGCAAGT TCAGGACAATAGGAACAAAAGAACGTTGGGAGAAATTCAGGAATATACAG ACGCAGCGGAGAGAACATCACGAATAATTTCTATGAAAGAATAtgtgaac aaaatattttcatgatgGGGCAAGACCAACAAGGTTCATGAATTTCTACC TATTCAATACACTTTGAGAATTTATGTTAATACTCTCAGGTGACTTTAGT TACCTGCCGATTTGTAATATAattcttcactttttgaccaTCCAGACCTT AAATGTACCCCTCCCCTGAattaatgtttgaaaaaatttcagctATAAGA ATAAAAGCTTTGTTGTCAAAACAACCTGCTTTCATTTACTCTATTCTGAT CAAGTGTCAggagtacaatttccaaccgtAATGAGAAATAACCCCTCTTT CATTTGGCTGTTGAAAGTACATGGAAACTATAGTAATAAAGTATAAATAC TACGAATTTGCAATCCGTTGCGAGATTTTACCAACAGGAATAGAACACAA GACCtcaaatgaacaaaaatttatGGAGCGATTCAACCATTATGAATCAG TCTCATTCTCTTAGCAACTTGCGTCTCCTTTTAATAATTTAGTTGATTTT AATGTTAATTATATATATTATTATAGATTTGTAAATAGATGAAAAATTGT GAACTTTTGGGAATATTATGAATCGTTAACGAAGAAGAAAGTTTTTAAAG CTATAAAACAGATAATTTCAAAcacaatttaatttttcagataatttcaA ACACAATTTAATTTTGCCTCGAGCCAACAAACCTCTAATTATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031819XLOC_031819Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050224-exon-scaffold_168-1491911889:210473..210545TCONS_00050224-exon-scaffold_168-1491911889:210473..210545Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1510915933:210473..210545TCONS_00050224-exon-scaffold_168-1510915933:210473..210545Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1575043694:210473..210545TCONS_00050224-exon-scaffold_168-1575043694:210473..210545Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1491911889:218900..219819TCONS_00050224-exon-scaffold_168-1491911889:218900..219819Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1510915933:218900..219819TCONS_00050224-exon-scaffold_168-1510915933:218900..219819Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1575043694:218900..219819TCONS_00050224-exon-scaffold_168-1575043694:218900..219819Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1491911889:220461..220698TCONS_00050224-exon-scaffold_168-1491911889:220461..220698Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1510915933:220461..220698TCONS_00050224-exon-scaffold_168-1510915933:220461..220698Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1575043694:220461..220698TCONS_00050224-exon-scaffold_168-1575043694:220461..220698Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1491911889:221229..221344TCONS_00050224-exon-scaffold_168-1491911889:221229..221344Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1510915933:221229..221344TCONS_00050224-exon-scaffold_168-1510915933:221229..221344Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1575043694:221229..221344TCONS_00050224-exon-scaffold_168-1575043694:221229..221344Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1491911889:221412..221522TCONS_00050224-exon-scaffold_168-1491911889:221412..221522Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1510915933:221412..221522TCONS_00050224-exon-scaffold_168-1510915933:221412..221522Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1575043694:221412..221522TCONS_00050224-exon-scaffold_168-1575043694:221412..221522Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1491911889:222243..223166TCONS_00050224-exon-scaffold_168-1491911889:222243..223166Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1510915933:222243..223166TCONS_00050224-exon-scaffold_168-1510915933:222243..223166Clytia hemisphaericaexon
TCONS_00050224-exon-scaffold_168-1575043694:222243..223166TCONS_00050224-exon-scaffold_168-1575043694:222243..223166Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:210473..223166 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.106884 0.0139173 0 0.106964 0.151556 0 0 0 0.88267 0 6.61383e-10 0 0 0.235605 0 0.345181 0.795693 1.56471e-05 1.46014e-09 6.52553e-10 2.71493 1.96094e-09 2.37229 2.15797 0 0 3.3883e-07 0.294953 0.804974 0.132625
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050224 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top