TCONS_00050359 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050359
Unique NameTCONS_00050359
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050359 ID=TCONS_00050359|Name=TCONS_00050359|organism=Clytia hemisphaerica|type=transcript|length=212bp
CAACCTAAAACAACCTCCAGTGGTTTTCAAACAAACATGCAACCTAAAAC
AACTTCCAGtggttgtcaaacaatcaaGCTGCAACCTAAAACAACctcca
gtggttgtcaaacTATGAAAACGCAGCCTAAAACAACCTCCAGCGGTTGT
CAAACAATCCAGCTGCGAGccaaaacaacctccagtggttgtcaaacAAA
CATGCAACCTAA
Run BLAST on NCBI

transcript from alignment at scaffold_169:140481..140692

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050359 ID=TCONS_00050359|Name=TCONS_00050359|organism=Clytia hemisphaerica|type=transcript|length=212bp|location=Sequence derived from alignment at scaffold_169:140481..140692 (Clytia hemisphaerica)
TTAGGTTGCATGTTTgtttgacaaccactggaggttgttttggCTCGCAG
CTGGATTGTTTGACAACCGCTGGAGGTTGTTTTAGGCTGCGTTTTCATAg
tttgacaaccactggagGTTGTTTTAGGTTGCAGCttgattgtttgacaa
ccaCTGGAAGTTGTTTTAGGTTGCATGTTTGTTTGAAAACCACTGGAGGT
TGTTTTAGGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031886XLOC_031886Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050359-exon-scaffold_169-1491911889:140481..140692TCONS_00050359-exon-scaffold_169-1491911889:140481..140692Clytia hemisphaericaexon
TCONS_00050359-exon-scaffold_169-1510915933:140481..140692TCONS_00050359-exon-scaffold_169-1510915933:140481..140692Clytia hemisphaericaexon
TCONS_00050359-exon-scaffold_169-1575043694:140481..140692TCONS_00050359-exon-scaffold_169-1575043694:140481..140692Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:140481..140692 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050359 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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