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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050361 ID=TCONS_00050361|Name=TCONS_00050361|organism=Clytia hemisphaerica|type=transcript|length=947bp
AGAAGGTTCAATGGAAACAACATATGGTTTTTGGTATGGTTTTATGGAAT
AAGATTCTAATGTTATTACATTCAGTGTTCTGAGGAGAATCGCCTTCTAA
Ctagacaaagaattttttttaatgattaatttgttcaatttcttattttt
tggtacTGGCTTAGGATGAATCTGCATTGGCTCTGGAGGGCCGTTCGAAG
TAAGGGGGCTAAAAATTTGAAGGAAGATATGATGTCGCCCATCATGGTGG
CCTTTAGGCCCATGATCTCTTTTCTTCGGAGGTATCTTTAACTGTAGGCG
GTTAACAGTAATGCTTTACATCTCTGCTATTCTGAGCTGTAACTGCGAGA
GGTTATAATAGAGAACATCACAGAATTCTTCTAAAGGCTAAGCCAGAAAG
CAAGCCAGGCATGTCTTGGGCAAAAAGGTTTTGTAACAGCCCGCAGTTTT
GACCAGCAGTTTTGAGGACCGTAAtcagtcaggatctagacaaataaaaa
aactaatcaTCTCCGACGCAGGAAAAGCGCCACATAATCTCCTACTTGCT
CGCTTAAAGTGCATTCTCGGTTGTTTTTATTATCAGGTCAAAATTGAGGT
ATTTCTTGTATATTTTTCGATTGTTCGACTTATCATCCTCAGCCcataat
tattttgttttgtgtttgtcaTAATATTGCATTGTGGTTTGAGATCAAAG
TATGGCCGGTATTTCATCTGAGTAATTAAATTACCGTTATATGCAATGTA
ATGCTCACGAATTACCACAAACCCATGACATAGTAATCTGTGTCTGTGTC
TGCGTCTATTTTCAATATGGTCAAGGAGCTGGTTTTAAGTTTAACACACA
TGCCACCCTGTTTTCACCCCGCCCAATAAGTCGAGGTTAGCATTTTTTCT
TAATTGGAGTGTGTATACGCGTATTTAAAATCGCATTAAAAAAGTCA Run BLAST on NCBI transcript from alignment at scaffold_169:160472..161418 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050361 ID=TCONS_00050361|Name=TCONS_00050361|organism=Clytia hemisphaerica|type=transcript|length=947bp|location=Sequence derived from alignment at scaffold_169:160472..161418 (Clytia hemisphaerica)
TGACTTTTTTAATGCGATTTTAAATACGCGTATACACACTCCAATTAAGA
AAAAATGCTAACCTCGACTTATTGGGCGGGGTGAAAACAGGGTGGCATGT
GTGTTAAACTTAAAACCAGCTCCTTGACCATATTGAAAATAGACGCAGAC
ACAGACACAGATTACTATGTCATGGGTTTGTGGTAATTCGTGAGCATTAC
ATTGCATATAACGGTAATTTAATTACTCAGATGAAATACCGGCCATACTT
TGATCTCAAACCACAATGCAATATTAtgacaaacacaaaacaaaataatt
atgGGCTGAGGATGATAAGTCGAACAATCGAAAAATATACAAGAAATACC
TCAATTTTGACCTGATAATAAAAACAACCGAGAATGCACTTTAAGCGAGC
AAGTAGGAGATTATGTGGCGCTTTTCCTGCGTCGGAGAtgattagttttt
ttatttgtctagatcctgactgaTTACGGTCCTCAAAACTGCTGGTCAAA
ACTGCGGGCTGTTACAAAACCTTTTTGCCCAAGACATGCCTGGCTTGCTT
TCTGGCTTAGCCTTTAGAAGAATTCTGTGATGTTCTCTATTATAACCTCT
CGCAGTTACAGCTCAGAATAGCAGAGATGTAAAGCATTACTGTTAACCGC
CTACAGTTAAAGATACCTCCGAAGAAAAGAGATCATGGGCCTAAAGGCCA
CCATGATGGGCGACATCATATCTTCCTTCAAATTTTTAGCCCCCTTACTT
CGAACGGCCCTCCAGAGCCAATGCAGATTCATCCTAAGCCAgtaccaaaa
aataagaaattgaacaaattaatcattaaaaaaaattctttgtctaGTTA
GAAGGCGATTCTCCTCAGAACACTGAATGTAATAACATTAGAATCTTATT
CCATAAAACCATACCAAAAACCATATGTTGTTTCCATTGAACCTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050361-exon-scaffold_169-1491911889:160472..161418 | TCONS_00050361-exon-scaffold_169-1491911889:160472..161418 | Clytia hemisphaerica | exon |
| TCONS_00050361-exon-scaffold_169-1510915933:160472..161418 | TCONS_00050361-exon-scaffold_169-1510915933:160472..161418 | Clytia hemisphaerica | exon |
| TCONS_00050361-exon-scaffold_169-1575043694:160472..161418 | TCONS_00050361-exon-scaffold_169-1575043694:160472..161418 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_169 | supercontig | scaffold_169:160472..161418 . |
Blast
The following BLAST results are available for this feature:
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