TCONS_00050320 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00050320
Unique Name	TCONS_00050320
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1307

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_169:365230..376986+
coding sequence from alignment at scaffold_169:365230..376986+

transcript sequence

>TCONS_00050320 ID=TCONS_00050320|Name=TCONS_00050320|organism=Clytia hemisphaerica|type=transcript|length=1307bp
ANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGActGGA
AAACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAG
TAGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTC
ACGTTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGC
TCACGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccg
ccaaattacCCAAAGGAGCACACATTGGGAACGGAGATATTTTATTCCGC
CCAGGAgaagaagaaaagttttttgaagaagGTTCAGACATTTTGAAAAG
AGACGCAATCCGAAATGAAAATGCACGGTGGCCGAAGGCAAGAGTGCCTT
ACGTCATTTCGTCTGCAAATTCCCAAGCAAGAGCTGCTATAACAGCAGCC
GCTAAGGAGTTTGCTGCCAAAACTTGTATTCGATTGGTACCGCGAACGAA
CGAAAGAGACTACGCTCGTATTATCGCTGGCGGAGGCTGTTATAGTTATG
TCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTCGCGGATGTGAA
TACAAGAGCACTGCAATCCATGAGTTCATGCACGCTTTGGGGTTCTTTCA
CGAGCAATCGAGACCTGATCGTGATCAATTCATTAGAATTAATTTCGGAA
ACGTCCAGTCAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCT
GTCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATGA
GAAATATGCATTTTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAA
AGAATAATCCAAATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCG
AGCATCGATGCCAAACAACTCAACGCTATGTACTGTGGAGGTGGCCCTGG
AAAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAG
CAAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGT
GCTGCACTTatgtaaaagatttttctttacgTTATGTAATTTGAACTTCT
GCAGTTAGTTAATGTAGTTAAATAGCTTTCGTAATATTGTANctttaata
attggtcaatggtacgcgttctttagaaaaagtaacaaaattgttttatt
acaggttaacgaccaaccaaatcaaaaaagagcttgtaaaaactccagct
tgtcccccaaatttggccctgttttacttgattttgtcctccagcgaatt
aatttga

Run BLAST on NCBI

protein sequence of TCONS_00050320-protein

>TCONS_00050320-protein ID=TCONS_00050320-protein|Name=TCONS_00050320-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
XANERVIGVNKSTVRLENFILNMKLSCLLLMVTVACIHAIPKDFKWHDTV
TLHHLKKSNEDFGDDGAHDLTHANLVDHAYDKSAKLPKGAHIGNGDILFR
PGEEEKFFEEGSDILKRDAIRNENARWPKARVPYVISSANSQARAAITAA
AKEFAAKTCIRLVPRTNERDYARIIAGGGCYSYVGRVGGSQDLSLGRGCE
YKSTAIHEFMHALGFFHEQSRPDRDQFIRINFGNVQSGMESQFRKQTSSS
VTTFNQPYDYVSVMHYEKYAFSKSYGRLATIVPKNNPNQKLGQDVNGGLS
SIDAKQLNAMYCGGGPGKPTTTKKPTTGGGVTAARCKKRMNNCSRFMREC
AALM

Run BLAST on NCBI

transcript from alignment at scaffold_169:365230..376986+

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00050320 ID=TCONS_00050320|Name=TCONS_00050320|organism=Clytia hemisphaerica|type=transcript|length=11757bp|location=Sequence derived from alignment at scaffold_169:365230..376986+ (Clytia hemisphaerica)
ANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGAGTAAG
TCTTTTTACATTAAGTAAATTTTCTCTAATTTGAATCTCTATTACGTGAC
TTTTCCTcccgttcaaaactttttgaacgtaagcaaactctacataaGGC
ACTCTTCAAGGTCttacgtaaaattttacgtacatgtgaaaaaagcttta
cttttgatagaatgaattcacaaaaaaaattataaagacagttttttgtt
aaaagtgtaaagGAATTTAAATCAAAGATTTTATCTTCAAACCTCTTAAC
CGATCTTATGACTGCTGTACAAAACATAATCTTATATGTCTTAAATTTAT
TTGACCTTCGGTGGTATTAATTTGAATAGAAATAAATTCAACTTGTATTG
GATTAGTTTCCCCACTTAATTATTACATGCATAATAATTTATGGCCCCCG
AAACGTCGATCAAATATAAAGCAAGATTCGcacaaatgcgactaaatatt
tcccttacacttgcagatggactgcctgatcgaaaaaaaaaaacgtttca
actTGAGGCCGTCCAGGCTTGCCCACCGCACTGGGCTCGACTTCAGTAAC
Tttcgaattatttattatttaaaggtctgattgtagcagtttaagatttt
gaataaaatgaaaactcgaccccaggcccaaaaatcaaaattttcaaaaa
agaaatacgGTTTGTctcttagccaatcagattgcttatatttttcaagt
tcaggaaaggaaaacaaaattcgagttatggagccaAAAAAGGGGAACAT
TCGATATAtggaggtttttttataagagtttattaggagattttcatgct
gccaacgaattttttcgagttaaggagatgttcgagtaatagaggttcga
gttatggagactctactgtatttaaaaaagtaagctcatctccaggataa
gatgataaaaactTCGGGCATTACGatacgcttataaaaaagtgtaggct
aaaaatatagaaaaaaggGCTTGGTACTGAAAGGGTTCACagcatacact
ctttttttataagaacaatcaggCTTAGACTGAAACAATATGTCTATCAA
GGAAACCAGCACAAATGGGATAGGGCAAATAAGCAGTTTTTATTGGAATC
ATAAAGGCAAAGGTCAAGGAATTGCATTGTNGACAAAGTTTATATTTTTC
CGTGTACGAAATATCGGACAATAGTTTTTCTATCGACTTATTTTTCGAGA
GTGTAAATAATCAATCTGCTCaacaagcagacaaggtttgttttatcgac
ctcttcttcgagaatgtaaatcaatctgctcaagcagacaaggtttgttt
tatcgacctctttgtcgataatgtaaatcaatctgctcaagcagacaagg
tttatatttttgccgTGTACCTCTTTAGTGATCAAGCACTGTTGTTTACT
CACGCTGTTGGTGATCAATGCTTCCTTAATCACCAGCACACTGTATGGCA
CTTTtaggagaaaaaaaagaaaaaagaatatgcatccaaaaacttcaaaa
atcctTAGGAAAAAGATCCCTGAAAGTCACTTTTAAAGCTGTCTGACTGT
CTGAAAAATAACCAGAGAGAAAGTCTNTCAGTCGAGGTGACAACCAAAAC
AGTCCAGAACATGCACCACATGGTGAGTTAAATTTCCTCAATAAAAATCG
CACATTGATTAATCCTGACTAAAGGTTTTACACTATAGGCAACAGTTCCG
CCTCGCTACACAAATGCCTCGCTGCACAAATCGATCGGGAGAGGCGTGGG
CGTTATtaagggcgcaaaaagggcgtaagtagccaaggatcgaagaaatg
cctttttaactaatatttccccttatagcggggaaatattcaataaaatt
tctctcaaatctattCTAGATTGGGAGGAAAGAAAATTCAGaggttttac
aaagatttttgctgcatgCAAAACTTTatcatctctactttatttctcga
aagtctttttcaaaattttcaatctcaacaatatttttcaatcgcttaaa
actattttctaatgccccccccccaaaaaacgTAGGTTTTTTCgcgattt
ctcgagatctcTTTAAGGTAGGACtatattaaaattttgaccatagtttg
gaaatgtgatttagagggttttgggcagaaatttgtttgataaagcTTTT
AAAGTATACCCCTGGTAGTTAAAGgtcaggtttggggcccccaaaatgTA
GGTGTATTTAAAATCATAAGCCCATtggtaatagggggagaaactataca
tttttattctcccttaaatttacgacccgatgaatgtaaaattttgtgat
tcataaaatattgcaagattttcgatgatgcaaagtccaaactaaaaatt
tataaattttcaaaataacaattATCATTTAACGACTTCttaattaaccc
tttaagtgccacggtcatttttttttctaagttttttaaagaaaatcgcc
agttcaaactttaaaggctaatatctccggatctagaaggagttagaagc
tcgtttatagtccgTTGGATAGATTAGaatctcctctttcttttaggcgc
ctTTGGCGCCGCCTAATTTAGGAAGGGTGGGGTGCGCGGCGGCTAAAGGG
AGGGAGGTAGTAAGggaaattaaagcagtcaggcctgaatgatagaaaga
tgcCCAGTGAAACTTCAAATTATTTCGCTGGAAGACAGAATCGAGTAAAT
CAGGGCCAAATTttgaggttcttggatcactcgttgaccaaaaatggtca
aaaaacggtcaaaatcttaaaaaagtggatttttgtcaaatttttgtatt
tgttttactttttagcttaaaatctcgctgaaaagactcacttttgattt
ttttttgcttggccgTAAAGctcaatccaattcctacgagttcgaccaaa
atgacgatttctaactcaaactgggcattacaggagggcttcacCCCAAT
Gtttgatatatacgacattggcacttaaagggttaagtttcagaaaacca
gtttctctcctatattttgaaaagaatAGAATTTCCCGTTTTCGCTGATT
CAGTGaacatttttatatataatgttaattttctgTTATAAACTAGCAAG
TAAAGCTGGTAGGAAGggaattccaaatttttttgctgttactcatattt
agaatttcggttttatcaatgctgattcttaGGGCCCgaaaaatactggt
tgaccttaagatgctatatcttttactcTTCATAAAGTCACAGATATATT
AGACTAGAGTCtgcttctgactgaactttgctttttgatggcggtgagtc
cagtgaagtagactatgagcatttgacgaggtttccattttgaaaaagaa
attttaaaatccaaataacaaaaaagctacttgaagttgaaaattttaat
taagaatgagaaacaaacatcaataacagattttgaatcccttattttca
aataaaagcattgcttcattcttttttttacctggcaaaaacaacgaact
gttttacagtccgcttaagcaaaagcatattaccatactgggccatccag
tctataaaaaagctttaagtggaccccgggctacagATGTATCTGTATTT
TCTGAAacgcattaggtgtagaaagctCCAAGGAGCTAGAATGAGTTATA
TGAAATTtctatctaattttggtgttgtaatattttcttcagacgcaaat
atgttattttgaatctgtttcaaaccatcaaaaacatactTATTTTAAAG
CATAatcatcattctttcaaaataaacaaaaatcgtttaattatctgata
aatctacaggtcagaatcctcgtgtccgttttgggggccatatactgtac
aaTTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACGTGGAG
AGTTTCAAATAACAagtttgtttcttcttttttttctagctGGAAAACTT
CATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAGCAT
GTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACGTTA
CATCATTTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCACGA
TTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgccaaat
tacgtaagttttttttcagattatgtAGTCTAGTAAGCTAGACGATCAAt
ccagacatagtagaaataaagcaaaaagtaatggagggaacaatttttat
acaaactaaatcccatAACAGTAATCgcattatcatataacgcctataac
ACACAATATAAACTCCAGTCTCCAGATTATGTTGACATATCTTATCTCAT
ATGATTCATGATTTTctagatcctgattgactgGGGATGACGGTTGTTGC
TTCAGTCCACATACATAAGCTCACTTGTCGAAAATTANAGCTAGAATGAG
TTATATGAAATTtctatctaattttggtgttgtaatattttcttcagacg
caaatatgttattttgaatctgtttcaaaccatcaaaaacatactTATTT
TAAAGCATAatcatcattctttcaaaataaacaaaaatcgtttaattatc
tgataaatctacaggtcagaatcctcgtgtccgttttgggggccatatac
tgtacaaTTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACG
TGGAGAGTTTCAAATAACAagtttgtttcttcttttttttctagctGGAA
AACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGT
AGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCA
CGTTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCT
CACGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgc
caaattacgtgagttttttttctgattatgTAGTCTAGTAAGCTAGACGA
TCAAtccagacatagtagaaataaagcaaaaagtaatggagggaacaatt
tttaTACTAACTAAATCCAATAACAGTATTCgcattatcatataacgcct
atactactgtattataCGCATTATAAACAACTCCAGTCTCCAGATTATGT
TGACATATCTTACATGATTCATGATTTTctagatcctgattgactgGGGA
TGACGGTTGTCGATTCAGTCACTCCGCCGTCCTCacaagtgcaaatacat
aagcTCGCTTCTCGAAAATTTATGTGATTTAGGTGATCTTTTATATAGGA
CTGAAAtggatttttcattttcatttcttctCTTAAAACAGCCAAAGGAG
CACACATTGGGAACGGAGATATTTTATTCCGCCCAGGAgaagaagaaaag
ttttttgaagaagGTTCAGACATTTTGAAAAGAGACGCAATCCGAAATGA
AAATGCACGGTGGCCGAAGGCAAGAGTGCCTTACGTCATTTCGTCTGCAA
GtaagctaaaaatatttttatttttctcttttacatTCCCGTGTTGCAGA
TgtctgccccttggtcaggGTTGTATATGCTTGAGCTTTCAAAGCATCAA
GACATAACCTTATTTGATGTTTATGAAGTGGTTATTGCCATAAATGCTGC
AATGTCGTGTATGCTTATATGCTGAATAAAAGCTTATGGAACTGTTCGAA
TTTTAAAAGCAGTGAAATATGAAGAAACGCGAACTTTAGCCCTTTTAGCG
GAAGTCTTTGAAATTTCTTGGAAGGGCCATTCGAAAAactttatgctcgc
gaaaaattcttgataaaaaatggaaaatctgtaaaacttcaaactttgaa
tgaaaTGTAAGAAGTAtagcactttttagcctgttaaTAAGTCAAAAGAC
AATAGTTCACATTCAAGaagccattttttcaaatgaaaatttatttcttg
ATTCACTCAAGGTTTATGCTCAGGAAAAAGATCTTTTCGTCGAATtcacg
aaagtaaatgtcgcaaatttcctgaattttctACCTCTCCAAAACTTCTG
CTCgagaaagtttgtacgcctatagtatgcttatgttatgctgtTAATCT
CACATAACTATCGTTCAACTATTCCAACTTATGATTTGAACTTAATCGTA
ACTTCCCTCCGAACTTAAATAAACctctttttctccattttcttTAGATT
CCCAAGCAAGAGCTGCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAAA
ACTTGTATTCGATTGGTACCGCGAACGAACGAAAGAGACTACGCTCGTAT
TATCGCTGGCGGAGGGTAAGTTTACTGTTTTTTCCTTACATAGAAAAAAA
AGTACTTACTCCAGGATGACTTGGCTTTTCCGTTCCCGGATAAATATTCC
TGGTACATTTCTGAAATCTTTCCGCTGCTTTCCCTGGGTTGCCTACAAAC
AGTCTCGGTCTATTTCAGTTGTAAAGGAATATTTAGCCGGGAATAAGGAA
TTTTAGCCATCATACAGTAATCAAATTCAAGCTGTGGTAAAGGgcgaaat
tcgattttaaaATATATAGTCCGCGGCTAGAAATTGCTTTACGAGAGATT
CGAGCTAATTAATACTTATAATTctctttactttttatttccatTACAGC
TGTTATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGG
TCGCGGATGTGAATACAAGAGCACTGCAATCCATGAGGTAAGTAGTCCTT
TTTCAACAACAATTTGCTCGTTTTTAAACGCTAActctactctgtaccag
agtgtatctcacgtttatcgcttcgtagtacctCTACGGCTTTTTCATAA
ATGATGTCACGACCAGTACCTGTTTTGTTAAATATGATGATGTAATTCTG
TGACAACTTATTTCCACTTTGTTTGCCAAAATTATGTTATGTGAACTCTC
ActaattttctcaaatctttctataatttgaactatCACTCAGCTCCCAT
CCTAATAAAAAACACTTGTACTCTCCAtagttcgaatctctctgttCGAA
CTAATTAGACTTCCCGTTTCACTTTGTCTGTAcccagacccagtatctac
ggctaatttcaaaattcattgccgtagaggtactacgaagcgataacaCT
CTACTTTGCTAGCGTAGGCGGTCAGAGCATCTCACTAGTATAcataataa
ttttataaatataaatatttttttctagactttgcACACATAtgttatat
aatattttcagccgaagagccaaatgtaaattttggagaTTGAAATACTA
GTATACcattattattactattattaagCTTTTCCACTGTACCAATATCA
TACAACACTTTTTCAAATCCAGGCCCCGAGCAAGTTTAAAGTTAGCAATG
ATAGAAGGAAACAAAGCCTTGGGACTTCATATGCGACAATGGTCGAAAtt
ctacagttgactctctctaattcgatcttcaagggacgaaaaattttcct
ttaattGTAAAAAGAATCGGATTATGGGGAGTGTTTTGCACGACTTTCTA
GCCGAAGGAACCAATGCTTTTAtctcgaattatagaaagatcaATAATAG
AGGTTAAAATTAGAGAGAGAGATGAGAgtattttattttccttttatttt
cagTTCATGCACGCTTTGGGGTTCTTTCACGAGCAATCGAGACCTGATCG
TGATCAATTCATTAGAATTAATTTCGGAAACGTCCAGTCAGGTGAGATTT
AGCAAATTATAAAGCAGATCACCAATAGAGTTTTTGACCTCATTAGCCAA
TCAAATGAAACCTATTCACTGTGAACCAATGGAGTTAAAGGTTTCTTCAT
ATAATATCCCCAACCAGACCTTTTCTGCATACTCAGAGCCAATCAAATTA
AACTTTGTTTATGCGAAATCAACTAAAAACTTGAAAGGgaattttcttag
tttttagtaTTGAAGGGTGTTTTCAACCTTTTCCGTTTCTCCTAGATACA
CATTGTTTTACAAACACTCTTATTTTCGGGTCAGACTTTGCGTTGCTTGC
ATTCTaactcattttctgaaaaatctgccttaaccacccctgatattata
ccatatctAAATTTATTAGGTCAAGGGCTATCGATTGCCATGGTTAGGTT
TTCTAAAAAGCTTTTCCTCTCAGAGATAGTGGAAAAAAACCGGCTAAATT
GAGGCCTCGAGCTTTAGCAACCTAGTTGCTTGTAAAAGAAATATCTATAT
ATATTAAATTACTATCTTAAGTGTACTTAATTTGGTGGTCGGCTAAAATG
TGATTTTTCagcgtgtatttaatttggcggatggcagaatttgtataatt
ttacgGGGATTTAATTTAGCGGATGGGGACATTTCAGGCACTTGTAAATC
ATAAATTACTTGATTTCTTAATAATTCTTACTTTAAAATGCTACTAATTT
TGGAAAGGAATTTCTATCataaagcttttttctaattttgtggatattta
attttgcggatggtaaatttcttaaaattttggcgggTATCTAATTTTGC
GAATCCACCAAATTTAATCtccgccaaaattaatacacttaagGTGTATT
TTCTATTTCTTAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTC
TGTCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATG
AGAAGTAAGTTATAACACTGaactagaattaaaaaaaactggaACGACCT
TCTTCATTTGTTTTGCGGATTTACTTTGTTGTTTATTCGAATTCTTCCAA
GAGATCTCGATTTTTGAAATGACTTGATGATCTCCAAAACCTATAAAGTG
TTGTACAGCTACTCTCGGAGACCTAATAAATGCCTCCTCTAATTCAACGG
TGGTCACACGTTTGTTTATAAAGCTTCGgtggctaaaatattaagaacat
gttaagaacatttgaagacTCTCCGGaatctaaaacacctgatttcttag
gaaaattgataaaaatacagaattgagaatatttcaacctctgaagacca
ataataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcactgactctt
tttaaaaagcattgatgatatttttcagttgtgttttcaacgacgggaat
aaaaatatcaactttgaacttcatccaaaatcttggatggtcgtcacggt
tacttttctctgcgttgattgcgcgctgaatagaatctggattggtagGC
ACAGCGTCGAATTATGATTTCCACCTGTGCTTTTAACGGTAATCACTCCC
ATAAAAGGCGATGAGTTTGGACCTGAttcatcatatttttcaaaacaaat
ttttcataacccaaaacaaaattctttcatctctgtcgattttctgattt
tgtaTAATTTCCCAACCACTATACCTATTAAGTCCATTGTGGGGGAGGGA
GCGTACGAGGCTCCTGAACACCgacaatttttcacaaaattacaACAATA
CcgacacatatttttttcatgtttttattcttCAAAATTCTAATATGAGA
TAAGAGGATAAGAGGGATTTCTGAGAATTTAGCACCGTTTCTCCATCGTT
TTAAGCAAAATTACCGTATCACCGATTGAATGTTATTTAATTAACATTTT
CCGTCATCTAAAAGCATCtcaaacaccgaaataccgacaaattTTTTGTT
GATCACCGAAAAACCGACGCAAAAAAAGGTCAACCGACACACCGACAAAC
TGGTACGCCCCCTCCATTGAGTACCTGTGACTACATGATATGTTTTCAAC
CAGCATTCAACTGACTATTTTTACATTTATTATCAAATCAGAAAACTGGG
AATTACATTTTCATCATTTAGTTTCTTACACTTTCTTTCAGATATGCATT
TTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAAAGAATAATCCAA
ATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCGAGCATCGATGCC
AAACAACTCAACGCTATGTACTGTGGAGGTATGTACAGTATGTTTATTTT
AACCGGGTTAATTTTTcttgagtttttgatttttgcctTTTTCGCCAAAA
AAAACTTGCGATATTGCATGAGATTGTTGATACGCGAAATTGACTAGTGA
ATAAAGTTACCTTTCGGCTCGGCCTAATTTGTGCATATCATATAAAAGGG
TTTCATGTTTTGTGAGGATGAACTAAAGAACTCAACCATTACTTTTTTAC
AATATCATATTTGCCGAcgaatattaaaaacaaaaattgtttcatcataC
ATCcttaaatacacccctgtctcacagccccggtggaacttttttgcCTC
AGAGGGGGATAAAAAATCCTAtggaaatctcaatggggatagaaattcta
ttgttccaggttaaaaaatctagttaggatggtttttgagtgcaatttta
gaacattgaatttcgaatggggttgaaatcaaagttaatttcccTGAAAT
TTCAGTGTATTTTCCCAGCGGGGACGaaatctttgccaaattttccagtg
agactggggtcccagcgggtctgtttAAGTTAGAAATAAAGTACAACTTT
TCATGATAACATAGCTGCATGCGCGGAACTGAAATTTGTTGGGTATCaga
aaattctatttttaagGGGTTTTTTTAATGTAGAGAAGAAAACAAACATG
ACGCCAGATAATACCCTGGTGTAGGCTGATGCAAGTAGAGAATTAGAGAA
TTAtagaaaagattcaaataatggaagttcgaataagcaaTAGGTGTGCT
GTAgtaattaaatccagaaaatttcgcgatttttttcgctcgcgaaattt
aatctcgcaaaATTTAAGCAATAGGTGTACtgtagttaattttttttctg
tatgGAACGATAAACTAAAGTACACTGTCTTTATCTTCTTATGTTGTCTG
GCAACTTTTTCTTCATCCTTTTTCTTCATCCTTTTTCTAGGTGGCCCTGG
AAAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAG
CAAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGT
GCTGCACTTatgtaaaagatttttctttacgTTATGTAATTTGAACTTCT
GCAGTTAGTTAATGTAGTTAAATAGCTTTCGTAATATTGTANctttaata
attggtcaatggtacgcgttctttagaaaaagtaacaaaattgttttatt
acaggttaacgaccaaccaaatcaaaaaagagcttgtaaaaactccagct
tgtcccccaaatttggccctgttttacttgattttgtcctccagcgaatt
aatttga

Coding sequence (CDS) from alignment at scaffold_169:365230..376986+

>TCONS_00050320 ID=TCONS_00050320|Name=TCONS_00050320|organism=Clytia hemisphaerica|type=CDS|length=9585bp|location=Sequence derived from alignment at scaffold_169:365230..376986+ (Clytia hemisphaerica)
ANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGActGGA
AAACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAG
TAGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTC
ACGTTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGC
TCACGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccg
ccaaattacCCAAAGGAGCACACATTGGGAACGGAGATATTTTATTCCGC
CCAGGAgaagaagaaaagttttttgaagaagGTTCAGACATTTTGAAAAG
AGACGCAATCCGAAATGAAAATGCACGGTGGCCGAAGGCAAGAGTGCCTT
ACGTCATTTCGTCTGCAAATTCCCAAGCAAGAGCTGCTATAACAGCAGCC
GCTAAGGAGTTTGCTGCCAAAACTTGTATTCGATTGGTACCGCGAACGAA
CGAAAGAGACTACGCTCGTATTATCGCTGGCGGAGGCTGTTATAGTTATG
TCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTCGCGGATGTGAA
TACAAGAGCACTGCAATCCATGAGTTCATGCACGCTTTGGGGTTCTTTCA
CGAGCAATCGAGACCTGATCGTGATCAATTCATTAGAATTAATTTCGGAA
ACGTCCAGTCAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCT
GTCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATGA
GAAATATGCATTTTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAA
AGAATAATCCAAATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCG
AGCATCGATGCCAAACAACTCAACGCTATGTACTGTGGAGGTGGCCCTGG
AAAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAG
CAAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGT
GCTGCACTTatgtaaANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTC
AACTGTCAGActGGAAAACTTCATTCTCAATATGAAGCTCTCTTGTTTGT
TGTTAATGGTTACAGTAGCATGTATTCACGCTATCCCTAAGGATTTTAAA
TGGCATGACACGGTCACGTTACATCATCTTAAGAAAAGCAATGAAGATTT
TGGTGATGATGGTGCTCACGATTTAACACACGCTAATCTAGTTGATCACG
CTTACgacaaatccgccaaattacCCAAAGGAGCACACATTGGGAACGGA
GATATTTTATTCCGCCCAGGAgaagaagaaaagttttttgaagaagGTTC
AGACATTTTGAAAAGAGACGCAATCCGAAATGAAAATGCACGGTGGCCGA
AGGCAAGAGTGCCTTACGTCATTTCGTCTGCAAATTCCCAAGCAAGAGCT
GCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAAAACTTGTATTCGATT
GGTACCGCGAACGAACGAAAGAGACTACGCTCGTATTATCGCTGGCGGAG
GCTGTTATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTT
GGTCGCGGATGTGAATACAAGAGCACTGCAATCCATGAGTTCATGCACGC
TTTGGGGTTCTTTCACGAGCAATCGAGACCTGATCGTGATCAATTCATTA
GAATTAATTTCGGAAACGTCCAGTCAGGAATGGAGAGCCAATTTCGCAAA
CAAACATCAAGTTCTGTCACAACTTTCAATCAACCTTATGATTATGTATC
TGTGATGCATTATGAGAAATATGCATTTTCTAAAAGTTATGGTCGCTTAG
CAACAATCGTTCCAAAGAATAATCCAAATCAAAAATTAGGTCAAGATGTA
AATGGTGGGTTATCGAGCATCGATGCCAAACAACTCAACGCTATGTACTG
TGGAGGTGGCCCTGGAAAACCCACAACCACCAAAAAACCAACCACTGGTG
GCGGTGTAACCGCAGCAAGATGTAAAAAACGAATGAATAATTGCTCCCGA
TTCATGAGAGAATGTGCTGCACTTatgtaaANAGCAAACGAAAGAGTTAT
TGGAGTTAACAAGTCAACTGTCAGActGGAAAACTTCATTCTCAATATGA
AGCTCTCTTGTTTGTTGTTAATGGTTACAGTAGCATGTATTCACGCTATC
CCTAAGGATTTTAAATGGCATGACACGGTCACGTTACATCATCTTAAGAA
AAGCAATGAAGATTTTGGTGATGATGGTGCTCACGATTTAACACACGCTA
ATCTAGTTGATCACGCTTACgacaaatccgccaaattacCCAAAGGAGCA
CACATTGGGAACGGAGATATTTTATTCCGCCCAGGAgaagaagaaaagtt
ttttgaagaagGTTCAGACATTTTGAAAAGAGACGCAATCCGAAATGAAA
ATGCACGGTGGCCGAAGGCAAGAGTGCCTTACGTCATTTCGTCTGCAAAT
TCCCAAGCAAGAGCTGCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAA
AACTTGTATTCGATTGGTACCGCGAACGAACGAAAGAGACTACGCTCGTA
TTATCGCTGGCGGAGGCTGTTATAGTTATGTCGGGCGTGTTGGCGGTAGT
CAAGATCTCTCTCTTGGTCGCGGATGTGAATACAAGAGCACTGCAATCCA
TGAGTTCATGCACGCTTTGGGGTTCTTTCACGAGCAATCGAGACCTGATC
GTGATCAATTCATTAGAATTAATTTCGGAAACGTCCAGTCAGGAATGGAG
AGCCAATTTCGCAAACAAACATCAAGTTCTGTCACAACTTTCAATCAACC
TTATGATTATGTATCTGTGATGCATTATGAGAAATATGCATTTTCTAAAA
GTTATGGTCGCTTAGCAACAATCGTTCCAAAGAATAATCCAAATCAAAAA
TTAGGTCAAGATGTAAATGGTGGGTTATCGAGCATCGATGCCAAACAACT
CAACGCTATGTACTGTGGAGGTGGCCCTGGAAAACCCACAACCACCAAAA
AACCAACCACTGGTGGCGGTGTAACCGCAGCAAGATGTAAAAAACGAATG
AATAATTGCTCCCGATTCATGAGAGAATGTGCTGCACTTatgtaaANAGC
AAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGActGGAAAACT
TCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAGCA
TGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACGTT
ACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCACG
ATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgccaaa
ttacCCAAAGGAGCACACATTGGGAACGGAGATATTTTATTCCGCCCAGG
AgaagaagaaaagttttttgaagaagGTTCAGACATTTTGAAAAGAGACG
CAATCCGAAATGAAAATGCACGGTGGCCGAAGGCAAGAGTGCCTTACGTC
ATTTCGTCTGCAAATTCCCAAGCAAGAGCTGCTATAACAGCAGCCGCTAA
GGAGTTTGCTGCCAAAACTTGTATTCGATTGGTACCGCGAACGAACGAAA
GAGACTACGCTCGTATTATCGCTGGCGGAGGCTGTTATAGTTATGTCGGG
CGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTCGCGGATGTGAATACAA
GAGCACTGCAATCCATGAGTTCATGCACGCTTTGGGGTTCTTTCACGAGC
AATCGAGACCTGATCGTGATCAATTCATTAGAATTAATTTCGGAAACGTC
CAGTCAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCTGTCAC
AACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATGAGAAAT
ATGCATTTTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAAAGAAT
AATCCAAATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCGAGCAT
CGATGCCAAACAACTCAACGCTATGTACTGTGGAGGTGGCCCTGGAAAAC
CCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAGCAAGA
TGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGTGCTGC
ACTTatgtaaANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTG
TCAGActGGAAAACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTA
ATGGTTACAGTAGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCA
TGACACGGTCACGTTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTG
ATGATGGTGCTCACGATTTAACACACGCTAATCTAGTTGATCACGCTTAC
gacaaatccgccaaattacCCAAAGGAGCACACATTGGGAACGGAGATAT
TTTATTCCGCCCAGGAgaagaagaaaagttttttgaagaagGTTCAGACA
TTTTGAAAAGAGACGCAATCCGAAATGAAAATGCACGGTGGCCGAAGGCA
AGAGTGCCTTACGTCATTTCGTCTGCAAATTCCCAAGCAAGAGCTGCTAT
AACAGCAGCCGCTAAGGAGTTTGCTGCCAAAACTTGTATTCGATTGGTAC
CGCGAACGAACGAAAGAGACTACGCTCGTATTATCGCTGGCGGAGGCTGT
TATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTCG
CGGATGTGAATACAAGAGCACTGCAATCCATGAGTTCATGCACGCTTTGG
GGTTCTTTCACGAGCAATCGAGACCTGATCGTGATCAATTCATTAGAATT
AATTTCGGAAACGTCCAGTCAGGAATGGAGAGCCAATTTCGCAAACAAAC
ATCAAGTTCTGTCACAACTTTCAATCAACCTTATGATTATGTATCTGTGA
TGCATTATGAGAAATATGCATTTTCTAAAAGTTATGGTCGCTTAGCAACA
ATCGTTCCAAAGAATAATCCAAATCAAAAATTAGGTCAAGATGTAAATGG
TGGGTTATCGAGCATCGATGCCAAACAACTCAACGCTATGTACTGTGGAG
GTGGCCCTGGAAAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGT
GTAACCGCAGCAAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCAT
GAGAGAATGTGCTGCACTTatgtaaANAGCAAACGAAAGAGTTATTGGAG
TTAACAAGTCAACTGTCAGActGGAAAACTTCATTCTCAATATGAAGCTC
TCTTGTTTGTTGTTAATGGTTACAGTAGCATGTATTCACGCTATCCCTAA
GGATTTTAAATGGCATGACACGGTCACGTTACATCATCTTAAGAAAAGCA
ATGAAGATTTTGGTGATGATGGTGCTCACGATTTAACACACGCTAATCTA
GTTGATCACGCTTACgacaaatccgccaaattacCCAAAGGAGCACACAT
TGGGAACGGAGATATTTTATTCCGCCCAGGAgaagaagaaaagttttttg
aagaagGTTCAGACATTTTGAAAAGAGACGCAATCCGAAATGAAAATGCA
CGGTGGCCGAAGGCAAGAGTGCCTTACGTCATTTCGTCTGCAAATTCCCA
AGCAAGAGCTGCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAAAACTT
GTATTCGATTGGTACCGCGAACGAACGAAAGAGACTACGCTCGTATTATC
GCTGGCGGAGGCTGTTATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGA
TCTCTCTCTTGGTCGCGGATGTGAATACAAGAGCACTGCAATCCATGAGT
TCATGCACGCTTTGGGGTTCTTTCACGAGCAATCGAGACCTGATCGTGAT
CAATTCATTAGAATTAATTTCGGAAACGTCCAGTCAGGAATGGAGAGCCA
ATTTCGCAAACAAACATCAAGTTCTGTCACAACTTTCAATCAACCTTATG
ATTATGTATCTGTGATGCATTATGAGAAATATGCATTTTCTAAAAGTTAT
GGTCGCTTAGCAACAATCGTTCCAAAGAATAATCCAAATCAAAAATTAGG
TCAAGATGTAAATGGTGGGTTATCGAGCATCGATGCCAAACAACTCAACG
CTATGTACTGTGGAGGTGGCCCTGGAAAACCCACAACCACCAAAAAACCA
ACCACTGGTGGCGGTGTAACCGCAGCAAGATGTAAAAAACGAATGAATAA
TTGCTCCCGATTCATGAGAGAATGTGCTGCACTTatgtaaANAGCAAACG
AAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGActGGAAAACTTCATT
CTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAGCATGTAT
TCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACGTTACATC
ATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCACGATTTA
ACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgccaaattacC
CAAAGGAGCACACATTGGGAACGGAGATATTTTATTCCGCCCAGGAgaag
aagaaaagttttttgaagaagGTTCAGACATTTTGAAAAGAGACGCAATC
CGAAATGAAAATGCACGGTGGCCGAAGGCAAGAGTGCCTTACGTCATTTC
GTCTGCAAATTCCCAAGCAAGAGCTGCTATAACAGCAGCCGCTAAGGAGT
TTGCTGCCAAAACTTGTATTCGATTGGTACCGCGAACGAACGAAAGAGAC
TACGCTCGTATTATCGCTGGCGGAGGCTGTTATAGTTATGTCGGGCGTGT
TGGCGGTAGTCAAGATCTCTCTCTTGGTCGCGGATGTGAATACAAGAGCA
CTGCAATCCATGAGTTCATGCACGCTTTGGGGTTCTTTCACGAGCAATCG
AGACCTGATCGTGATCAATTCATTAGAATTAATTTCGGAAACGTCCAGTC
AGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCTGTCACAACTT
TCAATCAACCTTATGATTATGTATCTGTGATGCATTATGAGAAATATGCA
TTTTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAAAGAATAATCC
AAATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCGAGCATCGATG
CCAAACAACTCAACGCTATGTACTGTGGAGGTGGCCCTGGAAAACCCACA
ACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAGCAAGATGTAA
AAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGTGCTGCACTTa
tgtaaANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGA
ctGGAAAACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGT
TACAGTAGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACA
CGGTCACGTTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGAT
GGTGCTCACGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaa
atccgccaaattacCCAAAGGAGCACACATTGGGAACGGAGATATTTTAT
TCCGCCCAGGAgaagaagaaaagttttttgaagaagGTTCAGACATTTTG
AAAAGAGACGCAATCCGAAATGAAAATGCACGGTGGCCGAAGGCAAGAGT
GCCTTACGTCATTTCGTCTGCAAATTCCCAAGCAAGAGCTGCTATAACAG
CAGCCGCTAAGGAGTTTGCTGCCAAAACTTGTATTCGATTGGTACCGCGA
ACGAACGAAAGAGACTACGCTCGTATTATCGCTGGCGGAGGCTGTTATAG
TTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTCGCGGAT
GTGAATACAAGAGCACTGCAATCCATGAGTTCATGCACGCTTTGGGGTTC
TTTCACGAGCAATCGAGACCTGATCGTGATCAATTCATTAGAATTAATTT
CGGAAACGTCCAGTCAGGAATGGAGAGCCAATTTCGCAAACAAACATCAA
GTTCTGTCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCAT
TATGAGAAATATGCATTTTCTAAAAGTTATGGTCGCTTAGCAACAATCGT
TCCAAAGAATAATCCAAATCAAAAATTAGGTCAAGATGTAAATGGTGGGT
TATCGAGCATCGATGCCAAACAACTCAACGCTATGTACTGTGGAGGTGGC
CCTGGAAAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAAC
CGCAGCAAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAG
AATGTGCTGCACTTatgtaaANAGCAAACGAAAGAGTTATTGGAGTTAAC
AAGTCAACTGTCAGActGGAAAACTTCATTCTCAATATGAAGCTCTCTTG
TTTGTTGTTAATGGTTACAGTAGCATGTATTCACGCTATCCCTAAGGATT
TTAAATGGCATGACACGGTCACGTTACATCATCTTAAGAAAAGCAATGAA
GATTTTGGTGATGATGGTGCTCACGATTTAACACACGCTAATCTAGTTGA
TCACGCTTACgacaaatccgccaaattacCCAAAGGAGCACACATTGGGA
ACGGAGATATTTTATTCCGCCCAGGAgaagaagaaaagttttttgaagaa
gGTTCAGACATTTTGAAAAGAGACGCAATCCGAAATGAAAATGCACGGTG
GCCGAAGGCAAGAGTGCCTTACGTCATTTCGTCTGCAAATTCCCAAGCAA
GAGCTGCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAAAACTTGTATT
CGATTGGTACCGCGAACGAACGAAAGAGACTACGCTCGTATTATCGCTGG
CGGAGGCTGTTATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCT
CTCTTGGTCGCGGATGTGAATACAAGAGCACTGCAATCCATGAGTTCATG
CACGCTTTGGGGTTCTTTCACGAGCAATCGAGACCTGATCGTGATCAATT
CATTAGAATTAATTTCGGAAACGTCCAGTCAGGAATGGAGAGCCAATTTC
GCAAACAAACATCAAGTTCTGTCACAACTTTCAATCAACCTTATGATTAT
GTATCTGTGATGCATTATGAGAAATATGCATTTTCTAAAAGTTATGGTCG
CTTAGCAACAATCGTTCCAAAGAATAATCCAAATCAAAAATTAGGTCAAG
ATGTAAATGGTGGGTTATCGAGCATCGATGCCAAACAACTCAACGCTATG
TACTGTGGAGGTGGCCCTGGAAAACCCACAACCACCAAAAAACCAACCAC
TGGTGGCGGTGTAACCGCAGCAAGATGTAAAAAACGAATGAATAATTGCT
CCCGATTCATGAGAGAATGTGCTGCACTTatgtaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031858	XLOC_031858	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00050320-protein	TCONS_00050320-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_169	supercontig	scaffold_169:365230..376986 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1208.37	1327.99	1064.31	937.935	12.5291	12.1953	1.8389	2.30471	6.58326	6.45911	18.7815	15.9122	0.0429864	0.111775	0	0.0664363	45.3417	63.196	0.017179	0	108.678	107.166	578.579	422.06	50.0751	56.0809	72.0139	64.8922	184.831	230.315

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001506	Peptidase_M12A
IPR006026	Peptidase_Metallo
IPR024079	MetalloPept_cat_dom
IPR034035	Astacin-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

Blast

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BLAST of TCONS_00050320 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 129.028 bits (323), Expect = 8.153e-33
Identity = 86/229 (37.55%), Postives = 120/229 (52.40%), Query Frame = 1

Query:  280 NGDILFRPGEEEKFFEEGSDILKRDAIRNENA---RWPKA-----RVPYVISSXXXXXXXXXXXXXXXXXXK-TCIRLVPRTNERDYARIIAGGGCYSYVGRVGGSQDLSLGRGCEYKSTAI--HEFMHALGFFHEQSRPDRDQFIRINFGNVQSGMESQFRKQTSSSVTTFNQPYDYVSVMHYEKYAFSKSYGRLATIVPKNNPNQKLGQDVNGGLSSIDAKQLNAMY 933
            N  ++     E  F  EG DI++    R  +A   +WP        VP+++SS   +    +   A     + TCIR V   ++RD+  II   GC+S VGR GG Q +SL   C  K   I  HE MH LGF+HE +R DRD++IR+N+  +  G E  F K  SS++ T   PYDY SVMHY + AFS+    L TI P   P+  +GQ  N  LS+ D  ++  +Y
Sbjct:   59 NQGLILEETPESSFLIEG-DIIRPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNMLT---PYDYSSVMHYGRLAFSRR--GLPTITPLWAPSVHIGQRWN--LSASDITRVLKLY 279

The following BLAST results are available for this feature:

BLAST of TCONS_00050320 vs. Swiss-Prot (Human)

BLAST of TCONS_00050320 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ASTL	8.153e-33	37.55	Astacin-like metalloendopeptidase OS=Homo sapiens ...	[more]

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TCONS_00050320 (transcript) - C. hemisphaerica