TCONS_00051079 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051079
Unique NameTCONS_00051079
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051079 ID=TCONS_00051079|Name=TCONS_00051079|organism=Clytia hemisphaerica|type=transcript|length=2157bp
ctggagcgaaaacgaaagttccgaatgtggtgctggagcgaaaacgaaag
tgccgaatGTGGTGCTGCGAAAGTGGTGTTGAATGTGGTGCTACCAATGT
GGTGCTGGCTtgcttttggtcaaaattttggtaCCTAATCCTGGTTTGCT
GCACAGCAGACTTACTTGGTATTGGCAGCAAAATGGAATTCAAAGCAGCT
AGCTGCTTTCTCCTTCTTCTCTTACCACTGATAAATGGCCAAAGCTCAGA
TTTATTTATTTCTGTTAACCCTGAAACAAACATGCTTGTCGACAGTTTAG
GAAGAGAGCGAATTTTCCACGGGACAAACGTTGTCGTAAAACACAAACCA
TTTCATCCAGAATTGGAAGGGTTTGATGAACATTCCTTTTCAGAAACTGA
TATGAAGCTGCTACAAAGTCTTGGCTTGAATACCATAAGATTGGGAATGA
TGATGCCCGGTTATGTTCCGCAAAGAGGAGAATATAATGAAACCTACATT
GAAACAGTTGGTACTATCGTCAAATTGGCTGCAAAATATGGTATCTACAC
CCTACTTGATATGCATCAAGATGTTTTTTCACCAAAACTTTGTGTTGAAG
GAATGCCTGATTGGATTGTTAATACAGGTGATGCAAAACCATTTCCATAT
CCATTAACTGAAGAACCATACAAAATCAACCCAGAAACTGGATATCCCTA
CCCTGAGGATTGTGCAAGATTACCATGGggaaattattactttgctgAGG
CAGCTGCTAAAGCTTTCCAAAGTTTGTACAGCAACGTTGATGGTTTAAGA
GACGAATGGGCAAATTTCTGGAGAAAAACAGCAgaatatttccaaaaata
tccGAGTGTAGTTGGCTATGAATTGATCAATGAACCTTTCTGTGGTGACA
TCTATAAGAATCCTTTGTTATTGGTACCTGGTATCGCTGACAAATTGAAC
CTTGAACCTGCATATGATGTTTTACAAAATGCTATTCGTCAAGTTGATGA
TCAACATGCAATCTTCTTTGAAGGAGTCACTTGGGATTTCTTTGATGTCG
GATTCTCAAAAGTACCAGGAGGTGCTGAATATCAAAACAGAAGTGTATTG
AGTTACCACTATTATGAACCACCAGATTTCTCCAAAACCTTGAGTTTCGC
TGCACGTATGAACgatttaaaacgtttaaaatgtggaggATTTTTATCGG
AAATGTACACTGTTGGAAAAGACTTTGAGGGTATGTATGAAATGCTAGAC
TTAGCTGATAAATACAAACAAAGCTGGCAAGGATGGATGTATAAACCTTA
TGGTTGTATCAAGATGAATCTAGCCTGTGAAAACTCCACAAATCACTCTG
GAGGACCTGGTGAAATCGTTGTTCAAAACACAAGTCGTACTTATCCTCAA
GCAGTTGCTGGTAACattcaaaattatcatttcaacAAAGATACAAAAGA
GTTTAGCTTGTCGTACAAAATTAACCCGGATTGTAAAAGCACCTTGACGG
AGATTTACTTTAATAAAGAAATGCATTATCCAAATGGTTACAAATACTCT
GTTTCACAAAATGTTCATTTAAGTGAAGAAGgatatttgattattttgga
tCATAAGGCAACTGGATATACGGCTGATGATTTGATTGAATTCACTTTGA
GTCCAAAGTAACTGCAGAATAGTTAGTGAATGTTTCATTGATTCTTACTA
TAATTTGTCATCAAATTCTATTATTATCTCAAATTACTATATCGTAGACA
AATAAATTGGATTAGGAGGAATCATAAAGAATTCTTGAATCCCTTAccct
aaaatttaaaagaaatttgggAGGATCCCAACTACATTTGACTTTCACAA
CAGTAACTCCCTAAAGGGCTTTGCTTGGACGGAAGGTAAATGTTATCCGA
ATTTTAGATTAGATATCGGGNTAAAGGGCTTTGCTTAGACGGAAGGTAAA
TGTTATCCGAATTTTAGATTAGATATCGGGTCGTCTATATATTTTTGGAG
CTATTTGGTCAAAGGAATAATATTATAACCCAGTGAATTTTACATTCTGC
TAAAAGTTTCTTTCTACTTCAGAGTTTCTTAATATTATTTCAAACATCAT
AATCTAGAAATTCTCACTtagaaaagaacaattttttctgAGAAGATTAA
ATTCCCC
Run BLAST on NCBI

protein sequence of TCONS_00051079-protein

>TCONS_00051079-protein ID=TCONS_00051079-protein|Name=TCONS_00051079-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
GAKTKVPNVVLERKRKCRMWCCESGVECGATNVVLACFWSKFWYLILVCC
TADLLGIGSKMEFKAASCFLLLLLPLINGQSSDLFISVNPETNMLVDSLG
RERIFHGTNVVVKHKPFHPELEGFDEHSFSETDMKLLQSLGLNTIRLGMM
MPGYVPQRGEYNETYIETVGTIVKLAAKYGIYTLLDMHQDVFSPKLCVEG
MPDWIVNTGDAKPFPYPLTEEPYKINPETGYPYPEDCARLPWGNYYFAEA
AAKAFQSLYSNVDGLRDEWANFWRKTAEYFQKYPSVVGYELINEPFCGDI
YKNPLLLVPGIADKLNLEPAYDVLQNAIRQVDDQHAIFFEGVTWDFFDVG
FSKVPGGAEYQNRSVLSYHYYEPPDFSKTLSFAARMNDLKRLKCGGFLSE
MYTVGKDFEGMYEMLDLADKYKQSWQGWMYKPYGCIKMNLACENSTNHSG
GPGEIVVQNTSRTYPQAVAGNIQNYHFNKDTKEFSLSYKINPDCKSTLTE
IYFNKEMHYPNGYKYSVSQNVHLSEEGYLIILDHKATGYTADDLIEFTLS
PK
Run BLAST on NCBI

transcript from alignment at scaffold_193:315177..322334-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051079 ID=TCONS_00051079|Name=TCONS_00051079|organism=Clytia hemisphaerica|type=transcript|length=7158bp|location=Sequence derived from alignment at scaffold_193:315177..322334- (Clytia hemisphaerica)
CTGGAGCGAAAACGAAAGTTCCGAATGTGGTGCTGGAGCGAAAACGAAAG TGCCGAATGTGGTGCTGCGAAAGTGGTGTTGAATGTGGTGCTACCAATGT GGTGCTGGCTTGCTTTTGGTCAAAATTTTGGTACCTAATCCTGGTTTGCT GCACAGCAGACTTACTTGGTATTGGCAGCAAAATGGAATTCAAAGCAGCT AGCTGCTTTCTCCTTCTTCTCTTACCACTGATAAATGGCCAAAGCTCAGA TTTATTTATTTCTGTTAACCCTGAAACAAACATGCTTGTCGACAGTTTAG GAAGAGAGCGAATTTTCCACGGGACAAACGTTGTCGTAAAACACAAACCA TTTCATCCAGAATTGGAAGGGTTTGATGAACATTCCTTTTCAGAAACTGA TATGAAGCTGCTACAAAGTCTTGGCTTGAATACCATAAGATTGGGTAAGA ATTATTCATGTTCAGCTTGGTAAAATCCATGTGTTTCCATTTCAAGAAAT TATAAGTCATCGATGACGTAAGAAATCATCTATCTATTTATATATTTAAG TAGTGACAAAACATACATGTTCGTTCTCCCTACATAATCAACAATAAATC ACTTGCCCCCTTTTTTTCCCTGATAAGGTATATAATATATGAAGACTCCC CGGATTGGCGAACATGAAGAAATAGAAGAAAAACTAAAATTCACTCCCTG GAAAATGTTTAGACTGTTTTATTTTGTTCAATCGCAAATGCTTGTGAAAG CGCCAAATATTTTAGTATCCAATTACGGCGATATTGATTGTTTTATTTTG TCCAATCAAGAAATTGCCGTACAATTGTTTAGAAAGAAGTATCCAATGAA ATGAAGGTAAAGCGCTTTCGTCCAATCAGAAAGGATATATTCTTTGAAAA AATAACGTTCGCATCAAATTCCCGCTTTTGTTTGAGAACTAAAGATAAGA AAAAATTCATCTATTAGAATCAACGATTGAAACAAATAAAGTTAAATGAC CACTCGTTATCCAAGGTGCCAAAAAACCATTAGCCCCGAAAAGTAGGGCC AGTCATTAACCTTCATCATACACGGCAATCTCATTGGTTGAAATTCAAAA AAGACTTTCCTATGGAGCAAATTACGGAAGCAACTGAGAAGAAGAGACCA CTTTCGTTTTTTTTATTGCAGATTTCGATATAAAAAATTGGATGGGGAAT ACTGCTGTCAATGTGTCAACTATGTAAGCATTTTATTGTTAGAATAGAAA AGAAAAAAGAGGTATGTCTAGTCTAGCCTAATTGTCAGCTGTCAGGGGGG CGTAAAAAGAATGTGAGAGCTTATTTGTATCGAACGCAAAACACACAGTA TTTACCAAGCTGATGTTTGGTGGTGGTTCTGTCAGCTTGGGAATTACTGT GTGTTTTGTTTTTGATATAAAAGTCTCTATATATAACGCCCCCTGACAGC TGACAATTAGGTTAGCTCTTTTCTCAGTCATATTCTAACAATACAATGCT TACATAGTTGACGCATAATACACATTGACAGAAGTATTCTCCCTTGCAAT GTTTATATTGAAATCTGTAATGAAAACGCAGTGGTCTTTTCTTCTCAGTG GCTTCTGTAAGTTGCTCCCTCTGAAAGTCTTTTTTAAATTCAGCCAATGA GATTGCTGTGAATGATGGAAGTCAACGACCTTGCCTAATTTTTGGGACTA ATGGCTTTTCAGCGCCTTGGATTAGTAAGTCACATTAGCGTCCCACCAAA AAATGCTTGTCAAAGATTGTAATGCTGTTAAAGCGCTTTATCGTTTACTT ATTTGCAGTTGCAATGGTTGCAAATACCAGTTAGTCACACAAGGAGATCA AGGTTTCTGAAAATATAATATCAGTCATCTACAGGATGTATTTGCAACAA AGGATGAGAGTTGCCTCAATCAAGTTCCCAAGAGAATTACTCTTTTGTGC TTAATTGTAGGGGGTGGAATAAGCAGGGGGTCGGTACTCTGGGAGAAAAC CTATGAAATGGGGGGTCAATATTAAATGATTTAGTGGTGATTTTCCCAAA AAACCCTAGCAAAATGAAGGTTTCGGCACTTTTTCAGGAAAACTTCATAA AATAGGGGGTCATTATAAAATGCTAATGTAATGGGCTAAACGCAATGCCA TTTTCGATAATTAAAAACTCCAGCACTAAAGTAATGATAAGAAAAAAATT AATGCAAACTTATAATAATTATGCATTATTGTGTCATTGTGTTAGTGCTG GAGTGCTTTGATAACATCCAACATGACATTGCGTCTAGCAAAAATCGAAA TCGGCCAAAAACTGATTTTGACGTTATACATCGAGAAAAAACACGTCAAA AAGACAATTTAAATGACGTCATTATTGAAAAAAGGCGATAATTCCGATTA ACTTACTACAATCAAAGCAAAATTTTGACTGGAGATGTAGATTAACGATT CTGAAATATTTTATGAAAAAAAATTTGAAAATTCATGATGACGTCAGCAT TTTTTGACGTATTTTAACTTTTCCCGACAACAAATGACATTTGTCATTCA AATTTTTTGAAAATTTTTGAACAAATATTTCAGAATCATCAATTTACAAC TCCAGTCAAAATTTGGTTTTGATTGCATTAATAAAATTGAAGTTATCGCT GTTTTTATCAATAATGACGTCATTTGAATCTTACTTGTGACGTGTTTTTT CGATGTATTTTATAACGTCAAGTTCAATTTTTGACTGATATCTTGAGATT GGTTTAATGCAAATTTTTGACCCAGCACTTTTCGAAATCCGCTCGTTGAT ATGATTCTTTTGAGCTATATATGAACGCTAAGGAATAACTGGAAGCGGTG CGCGTCACGCAAAATATACTTGGGACATGCCTTGTTTCACCCGAGAAATC TATTGCTTTTAGAGAAAATTGGACAGATGTGATGTATTTGTGTAGGACGT GATAGCATTTGAAATCCAAAGATTAGCAGGGCAATAATATTACATGAACG ATTAACAACGGTTAAGACAAGTAACACAATAATACTCAACAATACTTGAA TTCTTGCATAACGGAGATCCTAAGATTAATATATGCACATACCGGGTGTG TAAAAACGCCCCTATTTTACAATCTTTGACGTACATTTATCTATTTTGTC GAGCTGCTTGAATTTTTTTGTGAGTGTTTACATATATCCGTTTCCTCCTT CCTACTACTCATACGGCTTGGATAAGCAAGCATTGAATGTTGTCATGCTG TATTTCTTTCAAAAATTAAGTAACCACAAATAGGTGTCATAACTAAAAAA GCCTTAAGGCTTATAAATAAGCCTCTCGATCCCGCCTGAGGTTAAGACAA GTACCACCCAATCAGTTGTCTCCATTGAATTATCAGCTTTTTTATGCTTT AACTGATGGCGCTAGATAATTCCAATGTCTGTTTTTCGAATCCAAAAGAT AACGTAATTCGAAACAGAACATCAGATCTTCTATTTTGAAGTCATTGCAC TGCACTGTAACCTTGTAACGTAACATTTTTATGACGCATTGTTGGGAGAA CTCCCCCCTGCATCATATCAGCCTACACAGGATATTCTCTAGTGTCGATC AGTAATGTGAATAAAGCCTAGGATTCATGCCAACAATGTTCCAATTTTTT CAGGAATGATGATGCCCGGTTATGTTCCGCAAAGAGGAGAATATAATGAA ACCTACATTGAAACAGTTGGTACTATCGTCAAATTGGCTGCAAAATATGG TATCTACACCCTACTTGATATGCATCAAGATGTTTTTTCACCAAAACTTT GTGTTGAAGGAATGCCTGATTGGATTGTTAATACAGGTGAGTGTTTAAAA AATATCGTTTGGAATTCTTTTGGTGTATCTTATATCATAAAACTGAATAA TAAAGACGACTGTTCAATTTAAAAACAGCTTAAAAGGAATGACTGGCTGT GAAATGTTTAAATATTTAACCTGATGTTTACCTAATGGCTATATACCTCT TTAAATTCTTTTAGAAAAGCTCTATACCAAGATATAATTCTTTCCTTATG TATACTTTATCATAATAACTGTTTGTTCCCTAATTATCAGGTGATGCAAA ACCATTTCCATATCCATTAACTGAAGAACCATACAAAATCAACCCAGAAA CTGGATATCCCTACCCTGAGGATTGTGCAAGATTACCATGGGGAAATTAT TACTTTGCTGAGGCAGCTGCTAAAGCTTTCCAAAGTTTGTACAGCAACGT TGATGGTTTAAGAGACGAATGGGCAAATTTCTGGAGAAAAACAGCAGAAT ATTTCCAAAAATATCCGAGTGTAGTTGGCTATGAATTGATCAATGAACCT TTCTGTGGTGACATCTATAAGTAAGTCTTCACTTGGTGTTTTTACCAACC TAAATTAGTATGTAATTCGGACTCGTATTATCTTACATTTATAGATTTCC CAAAGGTTGTTTTCTATTGAGCATATTTGGTTATTATGTATCAATAGGTT ATTTTTAGGTTTAATTTGGTTTTGAAAAGGAGCATTGATAAAAGGAATCT CCTTATTTAGGAATCCTCTGTTGTTGGTACCTGGCATCGCTGACAAATTG AACCTTGAACCTGCATACGATGTTTTGCAAAAAGCTATTCGTCAAGTTGA TGATCAACATGCAATCTTCTTTGAAGGAGTCACTTGGGATTTCTTTGAAG TTGGATTCTCAAAAGTTCCAGGGGGTGCTGAATATCAAAACAGAAGTGTA TTGAGTTACCATTATTATGAACCACCAGATTTCTCGAAAACCCTAGATTT TGCTGCTAGGATGCAGGATCTCAAACGTTTGAAATGTGGAGGCTTTTTGA CAGAGCTCTTAACAGTCGGTACAGCTGATAAATTCAAGAATATGTTTGAG ATTATGGATTTTGCTGATCAATATAAACAAAGCTGGCATGGTTGGTTGTA CAAATCTTACCCAGAAAACAGCAACGGTACAGACTCTTCGGATGTCTTGG TTCAAAACACAAGTCGTACTTATCCTCAAGCAGTTGCTGGTAACATTCAA AATTATCATTTCAACAAAGATACAAAAGAGTTTAGCTTGTCTTACAAAAT CAAACCGAATTGTAAAAGCACCTTGACAGAGATTTACTTCAACAAGGAAA TGCATTACCCAAATGACTTTGAATATAAATTGACACCTGCTGACCATATT CAGATGACGGTTAGTGATAATGGCTTCCTAATATTATTGAACCACGATGG TGCTTTAAACGCAGGAGACCTTATTTCGTTTACAATGAACCCTAAATAAA CTTCAGAGAAATTATACGATAATTCTGCCACAAAACTTTGCTTGGATGGA AAAACAGTTCTAACAACTTAAATCAAAGCAAACTCTTCCATTTACTTTAG TAAGATTTCTAGGTAAATTTTTGATATAATTTTAACAATAATATTTTGAT TACAGATATACTTTATAATATATGAAAGTCGTTTAGGAATTGATTTGTTT TTTATATATAATTTTCAATTTTTAGATTTATAGATTTAACAAATTTTTTT ATAAGATAGATCTTTAATAATTTATTTTATTAAAAAACGATAATTTTGTA GATATACTGTAGTAGCTCCTAAAGATTAAAATTGATAAATAATTATTACT TCATTCATAACATGGGTTTATAAAACGCCAATATGAGTAATCATGGAAAA TGTATCTAAACAAAGAACTTGATTTGATATTTTGATGATTCCAAAGAAAC TATCTTAAGTTGTAGTTGCTTACTTTTTAAGTACATAGAGTTCCCTAAAA ACCTTGAATGTTTTTCAAGTTGAGTTTCATAGCTTATGATTATATGCCTT CATACTAGACTTAGAGATCTTTAATTCATCTATTTATCTAAACTGTTTTT ATCTTTAGGAATCCTTTGTTATTGGTACCTGGTATCGCTGACAAATTGAA CCTTGAACCTGCATATGATGTTTTACAAAATGCTATTCGTCAAGTTGATG ATCAACATGCAATCTTCTTTGAAGGAGTCACTTGGGATTTCTTTGATGTC GGATTCTCAAAAGTACCAGGAGGTGCTGAATATCAAAACAGAAGTGTATT GAGTTACCACTATTATGAACCACCAGATTTCTCCAAAACCTTGAGTTTCG CTGCACGTATGAACGATTTAAAACGTTTAAAATGTGGAGGATTTTTATCG GAAATGTACACTGTTGGAAAAGACTTTGAGGGTATGTATGAAATGCTAGA CTTAGCTGATAAATACAAACAAAGCTGGCAAGGATGGATGTATAAACCTT ATGGTTGTATCAAGATGAATCTAGCCTGTGAAAACTCCACAAATCACTCT GGAGGACCTGGTGAAATCGTTGTTCAAAACACAAGTCGTACTTATCCTCA AGCAGTTGCTGGTAACATTCAAAATTATCATTTCAACAAAGATACAAAAG AGTTTAGCTTGTCGTACAAAATTAACCCGGATTGTAAAAGCACCTTGACG GAGATTTACTTTAATAAAGAAATGCATTATCCAAATGGTTACAAATACTC TGTTTCACAAAATGTTCATTTAAGTGAAGAAGGATATTTGATTATTTTGG ATCATAAGGCAACTGGATATACGGCTGATGATTTGATTGAATTCACTTTG AGTCCAAAGTAACTGCAGAATAGTTAGTGAATGTTTCATTGATTCTTACT ATAATTTGTCATCAAATTCTATTATTATCTCAAATTACTATATCGTAGAC AAATAAATTGGATTAGGAGGAATCATAAAGAATTCTTGAATCCCTTACCC TAAAATTTAAAAGAAATTTGGGAGGATCCCAACTACATTTGACTTTCACA ACAGTAACTCCCTAAAGGGCTTTGCTTGGACGGAAGGTAAATGTTATCCG AATTTTAGATTAGATATCGGGNTAAAGGGCTTTGCTTAGACGGAAGGTAA ATGTTATCCGAATTTTAGATTAGATATCGGGTCGTCTATATATTTTTGGA GCTATTTGGTCAAAGGAATAATATTATAACCCAGTGAATTTTACATTCTG CTAAAAGTTTCTTTCTACTTCAGAGTTTCTTAATATTATTTCAAACATCA TAATCTAGAAATTCTCACTTAGAAAAGAACAATTTTTTCTGAGAAGATTA AATTCCCC

Coding sequence (CDS) from alignment at scaffold_193:315177..322334-

>TCONS_00051079 ID=TCONS_00051079|Name=TCONS_00051079|organism=Clytia hemisphaerica|type=CDS|length=6636bp|location=Sequence derived from alignment at scaffold_193:315177..322334- (Clytia hemisphaerica)
GAATCCTTTGTTATTGGTACCTGGTATCGCTGACAAATTGAACCTTGAAC
CTGCATATGATGTTTTACAAAATGCTATTCGTCAAGTTGATGATCAACAT
GCAATCTTCTTTGAAGGAGTCACTTGGGATTTCTTTGATGTCGGATTCTC
AAAAGTACCAGGAGGTGCTGAATATCAAAACAGAAGTGTATTGAGTTACC
ACTATTATGAACCACCAGATTTCTCCAAAACCTTGAGTTTCGCTGCACGT
ATGAACGATTTAAAACGTTTAAAATGTGGAGGATTTTTATCGGAAATGTA
CACTGTTGGAAAAGACTTTGAGGGTATGTATGAAATGCTAGACTTAGCTG
ATAAATACAAACAAAGCTGGCAAGGATGGATGTATAAACCTTATGGTTGT
ATCAAGATGAATCTAGCCTGTGAAAACTCCACAAATCACTCTGGAGGACC
TGGTGAAATCGTTGTTCAAAACACAAGTCGTACTTATCCTCAAGCAGTTG
CTGGTAACATTCAAAATTATCATTTCAACAAAGATACAAAAGAGTTTAGC
TTGTCGTACAAAATTAACCCGGATTGTAAAAGCACCTTGACGGAGATTTA
CTTTAATAAAGAAATGCATTATCCAAATGGTTACAAATACTCTGTTTCAC
AAAATGTTCATTTAAGTGAAGAAGGATATTTGATTATTTTGGATCATAAG
GCAACTGGATATACGGCTGATGATTTGATTGAATTCACTTTGAGTCCAAA
GTAAGTGATGCAAAACCATTTCCATATCCATTAACTGAAGAACCATACAA
AATCAACCCAGAAACTGGATATCCCTACCCTGAGGATTGTGCAAGATTAC
CATGGGGAAATTATTACTTTGCTGAGGCAGCTGCTAAAGCTTTCCAAAGT
TTGTACAGCAACGTTGATGGTTTAAGAGACGAATGGGCAAATTTCTGGAG
AAAAACAGCAGAATATTTCCAAAAATATCCGAGTGTAGTTGGCTATGAAT
TGATCAATGAACCTTTCTGTGGTGACATCTATAAGAATGATGATGCCCGG
TTATGTTCCGCAAAGAGGAGAATATAATGAAACCTACATTGAAACAGTTG
GTACTATCGTCAAATTGGCTGCAAAATATGGTATCTACACCCTACTTGAT
ATGCATCAAGATGTTTTTTCACCAAAACTTTGTGTTGAAGGAATGCCTGA
TTGGATTGTTAATACAGGGAGCGAAAACGAAAGTTCCGAATGTGGTGCTG
GAGCGAAAACGAAAGTGCCGAATGTGGTGCTGCGAAAGTGGTGTTGAATG
TGGTGCTACCAATGTGGTGCTGGCTTGCTTTTGGTCAAAATTTTGGTACC
TAATCCTGGTTTGCTGCACAGCAGACTTACTTGGTATTGGCAGCAAAATG
GAATTCAAAGCAGCTAGCTGCTTTCTCCTTCTTCTCTTACCACTGATAAA
TGGCCAAAGCTCAGATTTATTTATTTCTGTTAACCCTGAAACAAACATGC
TTGTCGACAGTTTAGGAAGAGAGCGAATTTTCCACGGGACAAACGTTGTC
GTAAAACACAAACCATTTCATCCAGAATTGGAAGGGTTTGATGAACATTC
CTTTTCAGAAACTGATATGAAGCTGCTACAAAGTCTTGGCTTGAATACCA
TAAGATTGGGAATCCTTTGTTATTGGTACCTGGTATCGCTGACAAATTGA
ACCTTGAACCTGCATATGATGTTTTACAAAATGCTATTCGTCAAGTTGAT
GATCAACATGCAATCTTCTTTGAAGGAGTCACTTGGGATTTCTTTGATGT
CGGATTCTCAAAAGTACCAGGAGGTGCTGAATATCAAAACAGAAGTGTAT
TGAGTTACCACTATTATGAACCACCAGATTTCTCCAAAACCTTGAGTTTC
GCTGCACGTATGAACGATTTAAAACGTTTAAAATGTGGAGGATTTTTATC
GGAAATGTACACTGTTGGAAAAGACTTTGAGGGTATGTATGAAATGCTAG
ACTTAGCTGATAAATACAAACAAAGCTGGCAAGGATGGATGTATAAACCT
TATGGTTGTATCAAGATGAATCTAGCCTGTGAAAACTCCACAAATCACTC
TGGAGGACCTGGTGAAATCGTTGTTCAAAACACAAGTCGTACTTATCCTC
AAGCAGTTGCTGGTAACATTCAAAATTATCATTTCAACAAAGATACAAAA
GAGTTTAGCTTGTCGTACAAAATTAACCCGGATTGTAAAAGCACCTTGAC
GGAGATTTACTTTAATAAAGAAATGCATTATCCAAATGGTTACAAATACT
CTGTTTCACAAAATGTTCATTTAAGTGAAGAAGGATATTTGATTATTTTG
GATCATAAGGCAACTGGATATACGGCTGATGATTTGATTGAATTCACTTT
GAGTCCAAAGTAAGTGATGCAAAACCATTTCCATATCCATTAACTGAAGA
ACCATACAAAATCAACCCAGAAACTGGATATCCCTACCCTGAGGATTGTG
CAAGATTACCATGGGGAAATTATTACTTTGCTGAGGCAGCTGCTAAAGCT
TTCCAAAGTTTGTACAGCAACGTTGATGGTTTAAGAGACGAATGGGCAAA
TTTCTGGAGAAAAACAGCAGAATATTTCCAAAAATATCCGAGTGTAGTTG
GCTATGAATTGATCAATGAACCTTTCTGTGGTGACATCTATAAGAATGAT
GATGCCCGGTTATGTTCCGCAAAGAGGAGAATATAATGAAACCTACATTG
AAACAGTTGGTACTATCGTCAAATTGGCTGCAAAATATGGTATCTACACC
CTACTTGATATGCATCAAGATGTTTTTTCACCAAAACTTTGTGTTGAAGG
AATGCCTGATTGGATTGTTAATACAGGGAGCGAAAACGAAAGTTCCGAAT
GTGGTGCTGGAGCGAAAACGAAAGTGCCGAATGTGGTGCTGCGAAAGTGG
TGTTGAATGTGGTGCTACCAATGTGGTGCTGGCTTGCTTTTGGTCAAAAT
TTTGGTACCTAATCCTGGTTTGCTGCACAGCAGACTTACTTGGTATTGGC
AGCAAAATGGAATTCAAAGCAGCTAGCTGCTTTCTCCTTCTTCTCTTACC
ACTGATAAATGGCCAAAGCTCAGATTTATTTATTTCTGTTAACCCTGAAA
CAAACATGCTTGTCGACAGTTTAGGAAGAGAGCGAATTTTCCACGGGACA
AACGTTGTCGTAAAACACAAACCATTTCATCCAGAATTGGAAGGGTTTGA
TGAACATTCCTTTTCAGAAACTGATATGAAGCTGCTACAAAGTCTTGGCT
TGAATACCATAAGATTGGGAATCCTTTGTTATTGGTACCTGGTATCGCTG
ACAAATTGAACCTTGAACCTGCATATGATGTTTTACAAAATGCTATTCGT
CAAGTTGATGATCAACATGCAATCTTCTTTGAAGGAGTCACTTGGGATTT
CTTTGATGTCGGATTCTCAAAAGTACCAGGAGGTGCTGAATATCAAAACA
GAAGTGTATTGAGTTACCACTATTATGAACCACCAGATTTCTCCAAAACC
TTGAGTTTCGCTGCACGTATGAACGATTTAAAACGTTTAAAATGTGGAGG
ATTTTTATCGGAAATGTACACTGTTGGAAAAGACTTTGAGGGTATGTATG
AAATGCTAGACTTAGCTGATAAATACAAACAAAGCTGGCAAGGATGGATG
TATAAACCTTATGGTTGTATCAAGATGAATCTAGCCTGTGAAAACTCCAC
AAATCACTCTGGAGGACCTGGTGAAATCGTTGTTCAAAACACAAGTCGTA
CTTATCCTCAAGCAGTTGCTGGTAACATTCAAAATTATCATTTCAACAAA
GATACAAAAGAGTTTAGCTTGTCGTACAAAATTAACCCGGATTGTAAAAG
CACCTTGACGGAGATTTACTTTAATAAAGAAATGCATTATCCAAATGGTT
ACAAATACTCTGTTTCACAAAATGTTCATTTAAGTGAAGAAGGATATTTG
ATTATTTTGGATCATAAGGCAACTGGATATACGGCTGATGATTTGATTGA
ATTCACTTTGAGTCCAAAGTAAGTGATGCAAAACCATTTCCATATCCATT
AACTGAAGAACCATACAAAATCAACCCAGAAACTGGATATCCCTACCCTG
AGGATTGTGCAAGATTACCATGGGGAAATTATTACTTTGCTGAGGCAGCT
GCTAAAGCTTTCCAAAGTTTGTACAGCAACGTTGATGGTTTAAGAGACGA
ATGGGCAAATTTCTGGAGAAAAACAGCAGAATATTTCCAAAAATATCCGA
GTGTAGTTGGCTATGAATTGATCAATGAACCTTTCTGTGGTGACATCTAT
AAGAATGATGATGCCCGGTTATGTTCCGCAAAGAGGAGAATATAATGAAA
CCTACATTGAAACAGTTGGTACTATCGTCAAATTGGCTGCAAAATATGGT
ATCTACACCCTACTTGATATGCATCAAGATGTTTTTTCACCAAAACTTTG
TGTTGAAGGAATGCCTGATTGGATTGTTAATACAGGGAGCGAAAACGAAA
GTTCCGAATGTGGTGCTGGAGCGAAAACGAAAGTGCCGAATGTGGTGCTG
CGAAAGTGGTGTTGAATGTGGTGCTACCAATGTGGTGCTGGCTTGCTTTT
GGTCAAAATTTTGGTACCTAATCCTGGTTTGCTGCACAGCAGACTTACTT
GGTATTGGCAGCAAAATGGAATTCAAAGCAGCTAGCTGCTTTCTCCTTCT
TCTCTTACCACTGATAAATGGCCAAAGCTCAGATTTATTTATTTCTGTTA
ACCCTGAAACAAACATGCTTGTCGACAGTTTAGGAAGAGAGCGAATTTTC
CACGGGACAAACGTTGTCGTAAAACACAAACCATTTCATCCAGAATTGGA
AGGGTTTGATGAACATTCCTTTTCAGAAACTGATATGAAGCTGCTACAAA
GTCTTGGCTTGAATACCATAAGATTGGGAATCCTTTGTTATTGGTACCTG
GTATCGCTGACAAATTGAACCTTGAACCTGCATATGATGTTTTACAAAAT
GCTATTCGTCAAGTTGATGATCAACATGCAATCTTCTTTGAAGGAGTCAC
TTGGGATTTCTTTGATGTCGGATTCTCAAAAGTACCAGGAGGTGCTGAAT
ATCAAAACAGAAGTGTATTGAGTTACCACTATTATGAACCACCAGATTTC
TCCAAAACCTTGAGTTTCGCTGCACGTATGAACGATTTAAAACGTTTAAA
ATGTGGAGGATTTTTATCGGAAATGTACACTGTTGGAAAAGACTTTGAGG
GTATGTATGAAATGCTAGACTTAGCTGATAAATACAAACAAAGCTGGCAA
GGATGGATGTATAAACCTTATGGTTGTATCAAGATGAATCTAGCCTGTGA
AAACTCCACAAATCACTCTGGAGGACCTGGTGAAATCGTTGTTCAAAACA
CAAGTCGTACTTATCCTCAAGCAGTTGCTGGTAACATTCAAAATTATCAT
TTCAACAAAGATACAAAAGAGTTTAGCTTGTCGTACAAAATTAACCCGGA
TTGTAAAAGCACCTTGACGGAGATTTACTTTAATAAAGAAATGCATTATC
CAAATGGTTACAAATACTCTGTTTCACAAAATGTTCATTTAAGTGAAGAA
GGATATTTGATTATTTTGGATCATAAGGCAACTGGATATACGGCTGATGA
TTTGATTGAATTCACTTTGAGTCCAAAGTAAGTGATGCAAAACCATTTCC
ATATCCATTAACTGAAGAACCATACAAAATCAACCCAGAAACTGGATATC
CCTACCCTGAGGATTGTGCAAGATTACCATGGGGAAATTATTACTTTGCT
GAGGCAGCTGCTAAAGCTTTCCAAAGTTTGTACAGCAACGTTGATGGTTT
AAGAGACGAATGGGCAAATTTCTGGAGAAAAACAGCAGAATATTTCCAAA
AATATCCGAGTGTAGTTGGCTATGAATTGATCAATGAACCTTTCTGTGGT
GACATCTATAAGAATGATGATGCCCGGTTATGTTCCGCAAAGAGGAGAAT
ATAATGAAACCTACATTGAAACAGTTGGTACTATCGTCAAATTGGCTGCA
AAATATGGTATCTACACCCTACTTGATATGCATCAAGATGTTTTTTCACC
AAAACTTTGTGTTGAAGGAATGCCTGATTGGATTGTTAATACAGGGAGCG
AAAACGAAAGTTCCGAATGTGGTGCTGGAGCGAAAACGAAAGTGCCGAAT
GTGGTGCTGCGAAAGTGGTGTTGAATGTGGTGCTACCAATGTGGTGCTGG
CTTGCTTTTGGTCAAAATTTTGGTACCTAATCCTGGTTTGCTGCACAGCA
GACTTACTTGGTATTGGCAGCAAAATGGAATTCAAAGCAGCTAGCTGCTT
TCTCCTTCTTCTCTTACCACTGATAAATGGCCAAAGCTCAGATTTATTTA
TTTCTGTTAACCCTGAAACAAACATGCTTGTCGACAGTTTAGGAAGAGAG
CGAATTTTCCACGGGACAAACGTTGTCGTAAAACACAAACCATTTCATCC
AGAATTGGAAGGGTTTGATGAACATTCCTTTTCAGAAACTGATATGAAGC
TGCTACAAAGTCTTGGCTTGAATACCATAAGATTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032373XLOC_032373Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051079-exon-scaffold_193-1575043694:321891..322334TCONS_00051079-exon-scaffold_193-1575043694:321891..322334Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1575043694:318499..318681TCONS_00051079-exon-scaffold_193-1575043694:318499..318681Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1575043694:317965..318244TCONS_00051079-exon-scaffold_193-1575043694:317965..318244Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1575043694:315177..316426TCONS_00051079-exon-scaffold_193-1575043694:315177..316426Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1510915933:321891..322334TCONS_00051079-exon-scaffold_193-1510915933:321891..322334Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1510915933:318499..318681TCONS_00051079-exon-scaffold_193-1510915933:318499..318681Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1510915933:317965..318244TCONS_00051079-exon-scaffold_193-1510915933:317965..318244Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1510915933:315177..316426TCONS_00051079-exon-scaffold_193-1510915933:315177..316426Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1491911889:321891..322334TCONS_00051079-exon-scaffold_193-1491911889:321891..322334Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1491911889:318499..318681TCONS_00051079-exon-scaffold_193-1491911889:318499..318681Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1491911889:317965..318244TCONS_00051079-exon-scaffold_193-1491911889:317965..318244Clytia hemisphaericaexon
TCONS_00051079-exon-scaffold_193-1491911889:315177..316426TCONS_00051079-exon-scaffold_193-1491911889:315177..316426Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051079-proteinTCONS_00051079-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_193supercontigscaffold_193:315177..322334 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.5066 9.35323 1.6635 0.932998 1.63515 1.29859 3.08034 3.30718 8.06033 7.06941 5.90269 7.80848 11.9638 11.4232 15.3321 14.4844 13.2522 12.2512 18.5697 15.6078 10.7546 10.9568 15.9368 20.4314 22.4191 20.6131 8.01916 15.8772 54.9162 45.3329
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001547Glyco_hydro_5
IPR018087Glyco_hydro_5_CS
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051079 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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