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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051110 ID=TCONS_00051110|Name=TCONS_00051110|organism=Clytia hemisphaerica|type=transcript|length=498bp
TGTCCATATCTTTGCCACAAGATTCAACATGGAATGTTAAATCTTGAAGG
GAAAACTCCTGACCGCATTCAAAACATTTCTCTTTCAAAATGGAAACTTC
TTCATCATTCTTTAATGGTATCACCGAAAGAGATTTCTGTATTGGCCTCA
AAAAGATTTTCCCTTGCCTAATACACAACTTTAAAGATCAGACATTTAAA
GGACAATTCAAGTTAACCAACGTTTTAGAGTTTGGTTCCACCTTCATTGG
TTGAAAACCACCTGGAGCCTTTAATGCTGGAAAACCAATAGTCTGCCAAT
CATTGTCTTTCTCCTCAGACATAATAGCTTGGTAAATAATAGTTTCATCA
TGCTGCTCAATATCAAGTTTAATTCTTTTCAATCCTAACCCAGCATTCAG
AAGGGTAACTCTTTCGGTTGGACAAGtcatttatttttttctggaaccTA
ATTCTAAAAACTGATGCAGACAACCATTGGTGCAAGGTTATCAAAAAT Run BLAST on NCBI transcript from alignment at scaffold_197:5..1164+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051110 ID=TCONS_00051110|Name=TCONS_00051110|organism=Clytia hemisphaerica|type=transcript|length=1160bp|location=Sequence derived from alignment at scaffold_197:5..1164+ (Clytia hemisphaerica)
TGTCCATATCTTTGCCACAAGATTCAACATGGAATGTTAAATCTTGAAGG
GAAAACTCCTGACCGCATTCAAAACATTTCTCTTTCAAAATGGAAACTTC
TTCATCATTCTTTAATGGTATCACCGAAAGAGATTTCTGTATTGGCCTCA
AAAAGATTTTCCCTTGCCTAATACACAACTTTAAAGATCAGACATTTAAA
GGACAATTCAAGTTAACCAACGTTTTAGAGTTTGGTTCCACCTTCATTGG
TTGAAAACCACCTGGAGCCTTTAATGCTGGAAAACCAATAGTCTGCCAAT
CATTGTCTTTCTCCTCAGACATAATAGCTTGGTAAATAATAGTTTCATCA
TGCTGCTCAATATCAAGTTTAATTCTTTTCAATCCTAACCCAGCATTCAG
AAGGGTAACTCTTTCGGTTGGACAAGGTATGCTTGTAGAAAACTTGTCGG
CCAGACAAAAAAACTGGGCCGACCAAGTCCTTTTCTTTGGTGCTTTCTTa
tctttttgttgctttttgttTCTAGTGGTTGCACTTGGATATGGGGCAAA
AAGATCTCGCCGTTCTTGTCTTATCCTGGACATTGTAGTGTTTTTACAGA
GTTCTTTCAATTTAACTCGATCCCCAAGCTTTTTAACACCAAGGTGTTTA
AGGTCTTCATGAGAAGCCGAAGTTATGACATTAGCATCGACCTTTTCATC
TTTGAACTTTTGTACTAGATGTGCCAAACCTAATTAATAATTGGCCAAAG
CTTCTtccatttttatttgtttgtctAAAAAAAGCAATAGTTACATatat
taccttaagtggataaattttcgcgtggattaattttcgcgattttcgcg
tgttttggccattttcgcgaaattctGTCCAcgcgaaaaaatttaaaatt
atgatttttgccaaaacccctaggaaaatgaaagaaattaggtgaAAAAG
TTAAGTTAAATAATATTACAGTAGTTGCCAACCAAAGGTTGCCTgcctca
atttttttttttaattaaacgtacttatttttttattcactGATAAAGAA
GAAAGGAGCTTTTATAAACCTTGTCTTTTACGTTttagtcatttattttt
ttctggaaccTAATTCTAAAAACTGATGCAGACAACCATTGGTGCAAGGT
TATCAAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051110-exon-scaffold_197-1491911889:5..430 | TCONS_00051110-exon-scaffold_197-1491911889:5..430 | Clytia hemisphaerica | exon |
| TCONS_00051110-exon-scaffold_197-1510915933:5..430 | TCONS_00051110-exon-scaffold_197-1510915933:5..430 | Clytia hemisphaerica | exon |
| TCONS_00051110-exon-scaffold_197-1575043694:5..430 | TCONS_00051110-exon-scaffold_197-1575043694:5..430 | Clytia hemisphaerica | exon |
| TCONS_00051110-exon-scaffold_197-1491911889:1093..1164 | TCONS_00051110-exon-scaffold_197-1491911889:1093..1164 | Clytia hemisphaerica | exon |
| TCONS_00051110-exon-scaffold_197-1510915933:1093..1164 | TCONS_00051110-exon-scaffold_197-1510915933:1093..1164 | Clytia hemisphaerica | exon |
| TCONS_00051110-exon-scaffold_197-1575043694:1093..1164 | TCONS_00051110-exon-scaffold_197-1575043694:1093..1164 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_197 | supercontig | scaffold_197:5..1164 + |
Blast
The following BLAST results are available for this feature:
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