TCONS_00054830 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054830
Unique NameTCONS_00054830
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1959

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054830 ID=TCONS_00054830|Name=TCONS_00054830|organism=Clytia hemisphaerica|type=transcript|length=1959bp
tgacaCCTTACTATAACGCAActtgatatttcaaatttttctttcttcgA
TCGAAAAGATTGACATCAACATACAAAAACCACAAACAAACAAGGACGCG
AAGTCACTAAGAAATAAAAGTCTACATCAACTAAGTTTTCGTGGTGAAAA
CTCCATTTCAACATGAGAGAATCTTTAACATTATTTTCATGGTTTTCTGG
ACTACTCATTCTAGTAACGGTGATCATTGATATCTTACTAGCGTTCAAGT
TCCGCCGATATTTCCGTGCCAATGGCTTTGGAATCGTCACTTTGACATTG
GTCAGTCTTGTCTTTGCGCATGGAGTCAGTGTTTTGTTCTATGGCATCAC
AACTCTGACTATAATGGGAAGTGGTGGGTCAGCAAAACATGAGTATAGTA
TCTTAATTGATCTCTCCAACATCTGGATGATCTCATCTACATTGCTTCAT
ATGATGGGCATCACTTTGCAACGAGTTTTCTCCTACACATACGGCAATCG
ATTCTTACAGTTCACCAGTAAACGCAAAAACATTGTTGTGGTGATTCTTA
ATATGTGGCTTGCCTCCCTTGTGATCACCATCCTGGTCTTAACCAATCGA
AACGCGTTATGCTTCTCTGTTTTCTATCTCGGTGTTTTCATCTGTGGTAC
CTTGACAATCGTTAATTTTATGTTAACAGTTGATACACATATCTTGCGAA
GTAAACCACTGAAAAACTCAGAAGACCACGAGCTTGCAATGGACATGTCA
AGTGTTAATTCACCTTCGAAGAAAGTTCGCGTCGTGCAAACACCCCGGAA
AACATTCTCTTTGTTTTCAGGTCTTCTGGCGTCATTCCTCCTGTTCACAT
TACCTGGCTGCATACCTAATCTCATCTTTAACTTGCGCGGAAAAGTTTTG
TCCGAATCAACGTACATTATCATCTCTTTGTGGTTGTTTCTCGGTCTCGT
TTTTGACTGTTTATGGATCTTGATGCGACTTCGCTCCACTATCAACAGCC
AAACAGGATTTTACGCACGTTGGACCTTACGAAAGAGCAGAGAGAATGTA
GCCAACTTCTTTAACGTCAAATCAACCGGCAACAATAATTATCACAAACG
AGCTGGCACTATGCGAGAGAAGCTGGTTTATGAGGATTCCTATGGACCTG
AAACAGAAGCTGAAACCATTTGAAGTTAAAGAGGTGACTTCTTCGGGAAG
TACGGAGCGaatgttttaaaacttttagaagtTTTGTCAATAGGAGGCAC
AATCatgattgttttgaaaatttgaagacaAATGGAACTTGCATCTGAGA
gataattttatttgtaaaaagtcAAGCATTATtactaaaaaatgccaaaa
caGTTGTTGAAATCGTAATCAGaattgaaaatcataaaataggaCGGCTT
ACAGAATAAAACTCATAACCTTTTGTCAGATTATTCatgaaatatttgtt
ttgaatcAATTGGTGGATAAAGCTGTTTAAATTTAGAGTTCACTCGCCCC
TTAAAAACTGCCcaagatagatagatagataattGGTTAGTTGTGTTACG
TTGATAATggaaaaaaacatatttaaagCTTGCAAAAGTGACGAATGTTT
TGTTTAAAACCAAATTGTCGTTGGCGTTTTCATTTCCGCTGTCAATACCA
CTTTAAATTCGTATGAAAGAGAGGTGtgaaaataaaaagagaaaaatgat
acgttattttaacttttttcgtaTTTTAAATACTATTATTATACGGACGG
ATACGATGATTTTTCAAGGAGAATACATATCTTTGACCAACATTCCTATC
CTCAAAGTATACCTGTTTTGGAATACACCAACTGCCCAAGTTATTATGct
aattttgacactttttcTAGAGATTTACTGCGCCACTGGGAATTAAGACA
GGATTGATAAAAAACTGGCCAAACTACTTTTCGACGAATTCCCTTTTAAA
TGACAACAG
Run BLAST on NCBI

protein sequence of TCONS_00054830-protein

>TCONS_00054830-protein ID=TCONS_00054830-protein|Name=TCONS_00054830-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MRESLTLFSWFSGLLILVTVIIDILLAFKFRRYFRANGFGIVTLTLVSLV
FAHGVSVLFYGITTLTIMGSGGSAKHEYSILIDLSNIWMISSTLLHMMGI
TLQRVFSYTYGNRFLQFTSKRKNIVVVILNMWLASLVITILVLTNRNALC
FSVFYLGVFICGTLTIVNFMLTVDTHILRSKPLKNSEDHELAMDMSSVNS
PSKKVRVVQTPRKTFSLFSGLLASFLLFTLPGCIPNLIFNLRGKVLSEST
YIIISLWLFLGLVFDCLWILMRLRSTINSQTGFYARWTLRKSRENVANFF
NVKSTGNNNYHKRAGTMREKLVYEDSYGPETEAETI
Run BLAST on NCBI

transcript from alignment at scaffold_245:616857..624675-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054830 ID=TCONS_00054830|Name=TCONS_00054830|organism=Clytia hemisphaerica|type=transcript|length=7819bp|location=Sequence derived from alignment at scaffold_245:616857..624675- (Clytia hemisphaerica)
TGACACCTTACTATAACGCAACTTGATATTTCAAATTTTTCTTTCTTCGG TAAGTGACTTTTTATATTTTTAGTTCATAATGGTAATTATATTAATTAAT TATTAAACTCTTCTAACCTGAGTGACGTATACACGGTCTAAATTTTCCAA TATACCAAGTCCCAGACTTAAGTCTACACGCACTATAAGAATGGTGTTTT TTCATGCTGAACATGCTAAATTCTTAACTTTCTAGTGGAAAACCATTGTT TAACTCCCAGGTTACAAGCTTCTATGCCATTTTAAAATTTTGGGTACAAA AAAAGGTTTAACCCTCGATTGTGTTACGTGGTCTTCTTCTTTCTCGTCAT CTTCATTCTTTCTTCTTTAATTCTAAGTTTTTCAACCTCGTAGTTTAAGT GAGTTATCCTCCTAATAAATATCTTTCCAACGGTGTATAATTATAGCATA AAATGGGTCATCAGAAGATTTAAACGTATGTTTCGTTTTATCGAACTTCA TTTTTTAATTATAGAAGATTCAAATCCCTCAAATATATCGCAATGTTTTA AAGAGGGTAATTATCTTTTCGACTGTTGCTCTATCTGCCTCCATCTGGTA TTGTAATTACGAGTAGTTATTTGAATGTGAAATAAGTGTTTGCAATCATA GCACAGTTATAATAAGGAATACGCTTTCAAGAAATTGTTACTCTTTCATT TGATGTCGGAGACATAATATGAAAGACAGACGAAGGAACTTTTATTAATT ACTATTTCCATTAAAGTGGCTTGGACAGATTTGGAGTTGTTAACAAAAGT CTTTTTTCGACTATCCTTTAGGCTTTCTAACTATAGCCTGAACTCTTCTC GTGTCTTACGTACATACGAGTAAACGTGTTATAACTGGTTTATCAGCAAC TTGGAAAATATCGACAAACTTTTCTCTCTCCACTTTTTCTTTGTTCTTTT TTCACCTCCTGTATTTTGGTGAAATCAATATCAAAAGTTTCGAAAATGAT TCGAAAATATTTGTGAGTTATATCCGTGAGTTATGCGTTGTGACGTCATT CCGTGAGTCAATTTGATTCATCACCTTATTTCGAAGAATAACAGCGCGAG TTATTAACTCACGACCTTAGGGAGCATTCAAAAAGTACGTTCGTCCAATT AACCCCCTCCTCCTTGTTCGTCAGTATTTGTTTTAAAGTCCCCCCCCCCC CCATTTGTAGGTTTTTTGTATCTCGCGCACGTTTCCCAAAGAATAAGTTT GTGAGTTAATAGCTCATGATATCATTCTTTGAAATAAGAGAGTCATCTTG GAAAATAATACGTTGAGTTAATTTAAAATTTATTCATGTTGACGAGCTAT TTTTCTGTGATCCTCGTTACTAGTTTTTCATGAGACTTCGTTCGTTCGAG ATGTTGTTTTATTTAGGATTTTATGCCTTAACTTAATTTGGAAGTTGATC AAAATTCGATTTTTAGCCGAGATTAGATTTGATCAATTCTGTAAACTTTG TTTGGGATTTTATTAGGGAGTGGTCAGANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNCTCGCGAAAAATATTTTTCCGTTAAA TTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGCGAAAG TTTCTGCTCGCGAAAGTTTGTAGGGGGTGGAGGATTTCAGGGGGGGTTCG AAATTTTTTTTGAGGGTTCCAAAATTTTTTCAATGGAAAAGGGAGGGCGG TGCGAAATTTTTTTGGCCAACTCAAGAGATATAACTCAGGTGGTCAAATT TCATGGTTTCACGTTTGAAGATTTAAAATTTTTTCATATTTCGTATTATT GTTACCTCTGTATTCATGAAATATCATTGTGATAGCCTTACTATTTCGGT TGCTTGATCTTAACATTGTGTAAAAATTGGTTCAGTGGACTAAGAGAGCA TGTTTGTTAAGGGATCCCTCCTCTTACAATTTCATATGTCAGCATTGTCT AACCTTTTTAAGAAGAGCTGAAAATACAGTGCTTTTAGCGAACAAAGTGA TTGAAAATTGAAATTTTCTCCTGTCGGCGCAAACCATGGTTCTCTGATAA TATTATTGCCTTTAAACGCAAAAAAAAACTTTACTTTTAAATTCCATATG ATTCAGACATTAAAAGCCTCATTTATGAGCAGAACCAATCCGAAAAAGAA CTATATTTGAAGGAAATCAGGAGTCCAAAGTTTTCTCCTGTCGGCGCAGA TCGGGTTGCGCCTCCTTTGTCACTAAATTCTTTACCTCTGCACGTTTGAA ATCAAGCCTCTTGCTGCCTTCTATATAATAATGTTGTCCTACCCACATGA GTGCACAATACATCTTGATATTGAGGCTTTATAGGATCACTCACAATCTG GAAATTTATTGCAGTTAAACCCGATTTACACGGGAAAAGCCCTTATCCAA AAGTAGGTATAAGTAAGTACGATAAGTATAACCCTCACCTTATTAATCAG TCAATAAGAGTGCAGGGGAAAATATTTTAGCAAGGGGGGGGGGGGGAAAA AATTTTTTTAACCCTTTTGAGGGGGGGGGGGTTCGAAAAAAATTTCCAGG TTAGGGGGGGGGGGGGGAAAAAATTTTTTTAACCCTTTTGAGGGGGGGGG GGTTCGAAAAAAATTTCCAGGTTAGGGGGGGGGGGGGGAAAAAATTTTTT TAACCCTTTTGAGGGGGGGGGGGTTCGAAAAAAATTTCCAGGTTAGGGGT GGGGGTGCGAAATTTATTTTCGATTTTTTTTAATATCCTCCACTCCCCCC TAGTAGATACTTTCTGACCACTCCCTTAGATCTAGACGAACGGGGAAGTT GAAGATAATAAAACACCTAGGCAAACCCAAATGCGCGGGATGTACACATG TGCCATCTTTTATGCGTTTTGAAATCCTGCAGATGAGTTATTAACTCGAA GATTTATTCTTTGGAATAAGGTCGTGAGTTAATAACTCGTGCTGTTGTTC TTATTCTATTCTGTCTATTTCCGCGTATTTTTACGTGTAAAATGCTGGAT TTATGTGCCCCCGTTTTTAGCCAATGAGTCTGGTCATTTTTTCATGTTCA CGATGAGGGTGTTTAGGGAAGAGACCTCTTAATGTACTTCATACAATATT TATGCGTGGGATGTCTCTCGGAAACTCATCTTTCAAGTAGTTTAAAGCCT TCACTTTTTCTTGAGATAAATGTTCTTTTCCCCCATTAATCTCTTTGAAT GTTTGTATTTCCGAAGCTTCTTGATGAGCTTACCGTTTGCCATATTTTCT TCTATCAAAAGTTAATCCTATAATTTGAAAAATTTCTTCTCTTTTAATTT CATTGTTTCTGGCCTGTCCTAGGAGTAGCTTCGAATTAGAAGTTCTTATT ATCGTATAGCTGACTTTGAAAGCCGGGCTAGGTAGTTGAGAAATACAGTA ACATGACGTAACGTGTTTTTTTGACGTGTTTTTCGGTGAATATTGAAAAA TAATTTTTCAATATAAACAATGAATAATGGTTTATATATTGTATGTGACT TTTGGGCTGACAGATCTAAATCGGATTGACATCTGTAGAAATGTTGATCG TTTTTTGGTGTGTGTTACAGTTCTAACATGAATTGACAAAGAAAGATACT AAGCAGTCTAACGAGCTTTCAATCACTTGGTAATATAGGTTAATCTTGAG GAGAGAAATTTGATTAATGTAGATCTCCTGGTCTTCCTTCTCTCTATTGA CCTCGTGTTGCAACTTGGTTTCCAGAGCAAATAAAAAAATTCATTGATGG TATCAATGAAAGAATTTTGAGAGTATATTGATATAAGCAGGGCAGAGACT GGCGACAAATATATTTACAGCTTAAGAGAGAGAAAGATTTTCAGTATTTG TGAAAAGCTTAACAGTTGAGAGTATTTGTAACTATTTATTAGAATTGTAT GCAATTTTTCCCAGCCAGTAGTTTGTCGATATTTATTCTCCTTGGAACCC AACAGAATGCTCTGGCAAACGGTGGTATCAAGGTTTGAATCGTTATAGTT AAAAACTTAGATGAAATATCTCCATTCAATCAGAGGGTTGTTGTCTTTCA TAAAACTTACATTCCAAGTCTTAATCTTAGTACAGGAATTTTCTTACGAT GAAATATGAGGCAAATTACAACAGCTAAGAAGTAAAGAAGATAGAGTCAT CATTCGTTTCTTTCAGTAAATTGATATGTACATAACTTGTATTTTCTTAC TTGAAGTGTTTGTCCAAAAGTATTGTTTGGACACAAGAGTGTAAGATTTT CTCATCATGATGCCATACTCATATTTTGTGGGCTGTTAGTTTTCAAATTG ATCTTAGAAATAGTTGTCTGTTTAATGAGCTGTATGGAAAAATACTTTTA AGCTGACTTGTTGCTTTTAGAGCATGATTAATACTTGTACCGGGTAGAAT CCATGTAAGGCTTCATTTCCTTCTCTATTTGATTCTGTTTTCTTACTGTA GGAGCTCTAGAATATGTTTTTCATCTTTTCTTCTTAATTATATTTTTTCA TTTTATTTTTCTAATCATAAATTTCGGGAGCTTAAGGATGAGAGGAATAA TTTAAAATAGAAAAATTAAAGCGCTTTAAAAAGATACGATTTCAAAGTTT TAAACCTCCTTCGTTTATAATTAAATTTTCACTTTTCTTTATGATTTGCT ACGGTGAAGTTATTGAAAAAGTGGGATTTTGTTTTGGTTTGTAGTTTGAC CGAGTTTTTAACTTAGGATTAGAGAAGATATTTAAAGCCCTAACACCTAA CAAACTTCATGAGTCATGTTACAGTTCTATTGTACAGTATTTACTCAAAA CTCTTTAAAAATTTGTACTGTTCTCTTTCGCATATTTATTTTCTTAATTC ATATAATATGTTTGCTAAAAAAGATAGATCGCTATTTCGTACTATTTCAT CTTCAATTCTAACATTTTGATTGGCTCAAAAAGGCGAAAAAATTATACCA TTGGTAAATATATATAACAAAGAGGGGCGACGAACAATAAAAGTATAGAG AAAAATGAAAATTAGAAATGAAAAAAAAAGATATGTTGTTTTGAATGTTA AAGTGAAATTTATTCGCAGGTTGTTTTAGTTCGTTCGTTGTTTTCCATCA GGTTTATGATATTCTGTAAGCTAAAACATAGCTAAATATAGTCATTTTTC AGTGTTTAATTTCTTTAATGTTCTTCCAATAGGACAAACTACTAAATCTN CTAAATATAGTTATTTCAGTGTTTAATTTCTTTAATGTTCTTCAAATAGG ACAAACTACTAAATCTTACTGTGCTCACTACACGGCACACGAAAGTTTAA AGAGAAATGAAATATTCTTTTTAGGACATTTTGAATAAAGGAATTAGTAG GAGTTTAGGCATTTCATCAATATTTTATATTTTGAAAAATATTCTTCCAC CATTTGGGAAAAAAAGTTTGGGGAATAGAGATCAGCTTCTTACACTCTTT CAGAAGTTCAATACTTAACTTTATTTTAAATTGACTTGGGATTTCTGTTA CACGCTCTTTTCACAGAATACATTTTTAGAGATCCTAGGCTCTGTTATAA TCATATGCCTGCAATCTCCAGGGGGCAGATGTGTAAGATTACACCAGTGG TGTTGTTTGAACTTCAATTTGTTCAAAACTAAAATATTTGTTGTTTATTG TTCCTTTAGATCGAAAAGATTGACATCAACATACAAAAACCACAAACAAA CAAGGACGCGAAGTCACTAAGAAATAAAAGTCTACATCAACTAAGTTTTC GTGGTGAAAACTCCATTTCAACATGAGAGAATCTTTAACATTATTTTCAT GGTTTTCTGGACTACTCATTCTAGTAACGGTGATCATTGATATCTTACTA GCGTTCAAGTTCCGCCGATATTTCCGTGCCAATGGCTTTGGAATCGTCAC TTTGACATTGGTCAGTCTTGTCTTTGCGCATGGAGTCAGTGTTTTGTTCT ATGGCATCACAACTCTGACTATAATGGGAAGTGGTGGGTCAGCAAAACAT GAGTATAGTATCTTAATTGATCTCTCCAACATCTGGATGATCTCATCTAC ATTGCTTCATATGATGGGCATCACTTTGCAACGAGTTTTCTCCTACACAT ACGGCAATCGATTCTTACAGTTCACCAGTAAACGCAAAAACATTGTTGTG GTGATTCTTAATATGTGGCTTGCCTCCCTTGTGATCACCATCCTGGTCTT AACCAATCGAAACGCGTTATGCTTCTCTGTTTTCTATCTCGGTGTTTTCA TCTGTGGTACCTTGACAATCGTTAATTTTATGTTAACAGTTGATACACAT ATCTTGCGAAGTAAACCACTGAAAAACTCAGAAGACCACGAGCTTGCAAT GGACATGTCAAGTGTTAATTCACCTTCGAAGAAAGTTCGCGTCGTGCAAA CACCCCGGAAAACATTCTCTTTGTTTTCAGGTCTTCTGGCGTCATTCCTC CTGTTCACATTACCTGGCTGCATACCTAATCTCATCTTTAACTTGCGCGG AAAAGTTTTGTCCGAATCAACGTACATTATCATCTCTTTGTGGTTGTTTC TCGGTCTCGTTTTTGACTGTTTATGGATCTTGATGCGACTTCGCTCCACT ATCAACAGCCAAACAGGATTTTACGCACGTTGGACCTTACGAAAGAGCAG AGAGAATGTAGCCAACTTCTTTAACGTCAAATCAACCGGCAACAATAATT ATCACAAACGAGCTGGCACTATGCGAGAGAAGCTGGTTTATGAGGATTCC TATGGACCTGAAACAGAAGCTGAAACCATTTGAAGTTAAAGAGGTGACTT CTTCGGGAAGTACGGAGCGAATGTTTTAAAACTTTTAGAAGTTTTGTCAA TAGGAGGCACAATCATGATTGTTTTGAAAATTTGAAGACAAATGGAACTT GCATCTGAGAGATAATTTTATTTGTAAAAAGTCAAGCATTATTACTAAAA AATGCCAAAACAGTTGTTGAAATCGTAATCAGAATTGAAAATCATAAAAT AGGACGGCTTACAGAATAAAACTCATAACCTTTTGTCAGATTATTCATGA AATATTTGTTTTGAATCAATTGGTGGATAAAGCTGTTTAAATTTAGAGTT CACTCGCCCCTTAAAAACTGCCCAAGATAGATAGATAGATAATTGGTTAG TTGTGTTACGTTGATAATGGAAAAAAACATATTTAAAGCTTGCAAAAGTG ACGAATGTTTTGTTTAAAACCAAATTGTCGTTGGCGTTTTCATTTCCGCT GTCAATACCACTTTAAATTCGTATGAAAGAGAGGTGTGAAAATAAAAAGA GAAAAATGATACGTTATTTTAACTTTTTTCGTATTTTAAATACTATTATT ATACGGACGGATACGATGATTTTTCAAGGAGAATACATATCTTTGACCAA CATTCCTATCCTCAAAGTATACCTGTTTTGGAATACACCAACTGCCCAAG TTATTATGCTAATTTTGACACTTTTTCTAGAGATTTACTGCGCCACTGGG AATTAAGACAGGATTGATAAAAAACTGGCCAAACTACTTTTCGACGAATT CCCTTTTAAATGACAACAG

Coding sequence (CDS) from alignment at scaffold_245:616857..624675-

>TCONS_00054830 ID=TCONS_00054830|Name=TCONS_00054830|organism=Clytia hemisphaerica|type=CDS|length=1011bp|location=Sequence derived from alignment at scaffold_245:616857..624675- (Clytia hemisphaerica)
ATGAGAGAATCTTTAACATTATTTTCATGGTTTTCTGGACTACTCATTCT
AGTAACGGTGATCATTGATATCTTACTAGCGTTCAAGTTCCGCCGATATT
TCCGTGCCAATGGCTTTGGAATCGTCACTTTGACATTGGTCAGTCTTGTC
TTTGCGCATGGAGTCAGTGTTTTGTTCTATGGCATCACAACTCTGACTAT
AATGGGAAGTGGTGGGTCAGCAAAACATGAGTATAGTATCTTAATTGATC
TCTCCAACATCTGGATGATCTCATCTACATTGCTTCATATGATGGGCATC
ACTTTGCAACGAGTTTTCTCCTACACATACGGCAATCGATTCTTACAGTT
CACCAGTAAACGCAAAAACATTGTTGTGGTGATTCTTAATATGTGGCTTG
CCTCCCTTGTGATCACCATCCTGGTCTTAACCAATCGAAACGCGTTATGC
TTCTCTGTTTTCTATCTCGGTGTTTTCATCTGTGGTACCTTGACAATCGT
TAATTTTATGTTAACAGTTGATACACATATCTTGCGAAGTAAACCACTGA
AAAACTCAGAAGACCACGAGCTTGCAATGGACATGTCAAGTGTTAATTCA
CCTTCGAAGAAAGTTCGCGTCGTGCAAACACCCCGGAAAACATTCTCTTT
GTTTTCAGGTCTTCTGGCGTCATTCCTCCTGTTCACATTACCTGGCTGCA
TACCTAATCTCATCTTTAACTTGCGCGGAAAAGTTTTGTCCGAATCAACG
TACATTATCATCTCTTTGTGGTTGTTTCTCGGTCTCGTTTTTGACTGTTT
ATGGATCTTGATGCGACTTCGCTCCACTATCAACAGCCAAACAGGATTTT
ACGCACGTTGGACCTTACGAAAGAGCAGAGAGAATGTAGCCAACTTCTTT
AACGTCAAATCAACCGGCAACAATAATTATCACAAACGAGCTGGCACTAT
GCGAGAGAAGCTGGTTTATGAGGATTCCTATGGACCTGAAACAGAAGCTG
AAACCATTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034539XLOC_034539Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054830-proteinTCONS_00054830-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054830-exon-scaffold_245-1575043694:624627..624675TCONS_00054830-exon-scaffold_245-1575043694:624627..624675Clytia hemisphaericaexon
TCONS_00054830-exon-scaffold_245-1575043694:616857..618766TCONS_00054830-exon-scaffold_245-1575043694:616857..618766Clytia hemisphaericaexon
TCONS_00054830-exon-scaffold_245-1510915933:624627..624675TCONS_00054830-exon-scaffold_245-1510915933:624627..624675Clytia hemisphaericaexon
TCONS_00054830-exon-scaffold_245-1510915933:616857..618766TCONS_00054830-exon-scaffold_245-1510915933:616857..618766Clytia hemisphaericaexon
TCONS_00054830-exon-scaffold_245-1491911889:624627..624675TCONS_00054830-exon-scaffold_245-1491911889:624627..624675Clytia hemisphaericaexon
TCONS_00054830-exon-scaffold_245-1491911889:616857..618766TCONS_00054830-exon-scaffold_245-1491911889:616857..618766Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:616857..624675 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.81092 0.553542 0.252495 0.247027 0.437428 0.777739 3.28408 3.29413 3.16048 2.58163 2.01285 1.95775 4.93475 5.05478 2.80885 4.23735 3.53078 4.86684 5.36611 5.25443 6.93878 6.85504 2.90558 3.40237 5.78981 7.36239 7.53334 5.99275 19.7338 18.2716
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054830 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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