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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051675 ID=TCONS_00051675|Name=TCONS_00051675|organism=Clytia hemisphaerica|type=transcript|length=925bp
ACCTGAACAAATCTGGTTCAATGATCTCTTTCATTTCTTGctctttgttt
tctttaatcTTTTTGTCCACTTGATCCAAAATATTAAGTAATATATCTTG
CTTTTCTTgatcaattttgttttttaaatcctCCCTCAAGTCCAACAAAT
CTTGATTTTGATGATCAATTTCATCTTTGAAGTCCTCTCTTAAGTCTAAA
ATATCTTGACTTTGCTGATCAATTTCATCTTTGAAGTCCTCTCTTAAGTC
TAAAATATCTTGATTTTGTTGATCAATTTCATCTTTGAAGTCCTCTTTCA
AGTCTTCAATCAAACCCTCGATGAACATCTTTCCGTCGTTTAAATCGAAT
GTGACTTTATCAGTCAGCATATTATTAAAATCATTGATGGATTTGTAGCT
TAGCCCGGTTAATCCTAGTCGAATCTTAGCCCAAATGTTCTGAAAGTGCT
GTGGTTTGAGGAAATCATCTGGTGCACCGTGCACTATCTGATTTCTCAGT
TCACGAATCAAAATGACGAAAGCAGCGATTGACGTATCGCCAGCTTTGGG
CTCTTTGATTCCCCATCCTCCTTGAGGTTTCggaatattcacaaaatttc
tGATCAATAATGCTAAAAGGGTGATGTCGAAAAGTTTTGACGAAGTTTCT
TGTTTTCCTGGAGGTAGAAGAAGGTCATACTGGTCTTTcttcaaaatgtt
ctttttgAGCAACTTGTCCAGTGTTGTTTTATTTGCAAGGAAAAACTGAT
ACAGCTTTTTCTCATCAACAGGAAGACCTTGGTAGGCAGGATCATGTAAG
ATTTGCAGCAAGGCCATCTTCCCGTGAAAAGTGAGGGCAAAAATGCATTT
TGTCCACTCCTTATTCTTGCCGACGATTTTAGAGAATTGACTTcccattt
ttctattttttattaaaaatctgaa Run BLAST on NCBI protein sequence of TCONS_00051675-protein >TCONS_00051675-protein ID=TCONS_00051675-protein|Name=TCONS_00051675-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
FRFLIKNRKMGSQFSKIVGKNKEWTKCIFALTFHGKMALLQILHDPAYQG
LPVDEKKLYQFFLANKTTLDKLLKKNILKKDQYDLLLPPGKQETSSKLFD
ITLLALLIRNFVNIPKPQGGWGIKEPKAGDTSIAAFVILIRELRNQIVHG
APDDFLKPQHFQNIWAKIRLGLTGLSYKSINDFNNMLTDKVTFDLNDGKM
FIEGLIEDLKEDFKDEIDQQNQDILDLREDFKDEIDQQSQDILDLREDFK
DEIDHQNQDLLDLREDLKNKIDQEKQDILLNILDQVDKKIKENKEQEMKE
IIEPDLFR Run BLAST on NCBI transcript from alignment at scaffold_202:5268..6192 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051675 ID=TCONS_00051675|Name=TCONS_00051675|organism=Clytia hemisphaerica|type=transcript|length=925bp|location=Sequence derived from alignment at scaffold_202:5268..6192 (Clytia hemisphaerica)
ttcagatttttaataaaaaatagaaaaatgggAAGTCAATTCTCTAAAAT
CGTCGGCAAGAATAAGGAGTGGACAAAATGCATTTTTGCCCTCACTTTTC
ACGGGAAGATGGCCTTGCTGCAAATCTTACATGATCCTGCCTACCAAGGT
CTTCCTGTTGATGAGAAAAAGCTGTATCAGTTTTTCCTTGCAAATAAAAC
AACACTGGACAAGTTGCTcaaaaagaacattttgaagAAAGACCAGTATG
ACCTTCTTCTACCTCCAGGAAAACAAGAAACTTCGTCAAAACTTTTCGAC
ATCACCCTTTTAGCATTATTGATCagaaattttgtgaatattccGAAACC
TCAAGGAGGATGGGGAATCAAAGAGCCCAAAGCTGGCGATACGTCAATCG
CTGCTTTCGTCATTTTGATTCGTGAACTGAGAAATCAGATAGTGCACGGT
GCACCAGATGATTTCCTCAAACCACAGCACTTTCAGAACATTTGGGCTAA
GATTCGACTAGGATTAACCGGGCTAAGCTACAAATCCATCAATGATTTTA
ATAATATGCTGACTGATAAAGTCACATTCGATTTAAACGACGGAAAGATG
TTCATCGAGGGTTTGATTGAAGACTTGAAAGAGGACTTCAAAGATGAAAT
TGATCAACAAAATCAAGATATTTTAGACTTAAGAGAGGACTTCAAAGATG
AAATTGATCAGCAAAGTCAAGATATTTTAGACTTAAGAGAGGACTTCAAA
GATGAAATTGATCATCAAAATCAAGATTTGTTGGACTTGAGGGaggattt
aaaaaacaaaattgatcAAGAAAAGCAAGATATATTACTTAATATTTTGG
ATCAAGTGGACAAAAAgattaaagaaaacaaagagCAAGAAATGAAAGAG
ATCATTGAACCAGATTTGTTCAGGT Coding sequence (CDS) from alignment at scaffold_202:5268..6192 >TCONS_00051675 ID=TCONS_00051675|Name=TCONS_00051675|organism=Clytia hemisphaerica|type=CDS|length=924bp|location=Sequence derived from alignment at scaffold_202:5268..6192 (Clytia hemisphaerica)
ttcagatttttaataaaaaatagaaaaatgggAAGTCAATTCTCTAAAAT
CGTCGGCAAGAATAAGGAGTGGACAAAATGCATTTTTGCCCTCACTTTTC
ACGGGAAGATGGCCTTGCTGCAAATCTTACATGATCCTGCCTACCAAGGT
CTTCCTGTTGATGAGAAAAAGCTGTATCAGTTTTTCCTTGCAAATAAAAC
AACACTGGACAAGTTGCTcaaaaagaacattttgaagAAAGACCAGTATG
ACCTTCTTCTACCTCCAGGAAAACAAGAAACTTCGTCAAAACTTTTCGAC
ATCACCCTTTTAGCATTATTGATCagaaattttgtgaatattccGAAACC
TCAAGGAGGATGGGGAATCAAAGAGCCCAAAGCTGGCGATACGTCAATCG
CTGCTTTCGTCATTTTGATTCGTGAACTGAGAAATCAGATAGTGCACGGT
GCACCAGATGATTTCCTCAAACCACAGCACTTTCAGAACATTTGGGCTAA
GATTCGACTAGGATTAACCGGGCTAAGCTACAAATCCATCAATGATTTTA
ATAATATGCTGACTGATAAAGTCACATTCGATTTAAACGACGGAAAGATG
TTCATCGAGGGTTTGATTGAAGACTTGAAAGAGGACTTCAAAGATGAAAT
TGATCAACAAAATCAAGATATTTTAGACTTAAGAGAGGACTTCAAAGATG
AAATTGATCAGCAAAGTCAAGATATTTTAGACTTAAGAGAGGACTTCAAA
GATGAAATTGATCATCAAAATCAAGATTTGTTGGACTTGAGGGaggattt
aaaaaacaaaattgatcAAGAAAAGCAAGATATATTACTTAATATTTTGG
ATCAAGTGGACAAAAAgattaaagaaaacaaagagCAAGAAATGAAAGAG
ATCATTGAACCAGATTTGTTCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051675-exon-scaffold_202-1491911889:5268..6192 | TCONS_00051675-exon-scaffold_202-1491911889:5268..6192 | Clytia hemisphaerica | exon |
| TCONS_00051675-exon-scaffold_202-1510915933:5268..6192 | TCONS_00051675-exon-scaffold_202-1510915933:5268..6192 | Clytia hemisphaerica | exon |
| TCONS_00051675-exon-scaffold_202-1575043694:5268..6192 | TCONS_00051675-exon-scaffold_202-1575043694:5268..6192 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:5268..6192 . |
Blast
The following BLAST results are available for this feature:
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