TCONS_00051654 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051654
Unique NameTCONS_00051654
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051654 ID=TCONS_00051654|Name=TCONS_00051654|organism=Clytia hemisphaerica|type=transcript|length=158bp
TGTTGGAGGATTTTTGGTTGTGGTTGTAGGCTTTGTTGTGGGAGAAAGTA
TCGTTGTTGAAGGACTTTTTGTTGTCATAACTGTTGATGAAATAGATGGG
GTGATTGATAGAGTAGATATTGGTTTAGTCTTGGTTGTGTAGGGTGTTGG
TGGTGAGG
Run BLAST on NCBI

transcript from alignment at scaffold_202:1016200..1016573-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051654 ID=TCONS_00051654|Name=TCONS_00051654|organism=Clytia hemisphaerica|type=transcript|length=374bp|location=Sequence derived from alignment at scaffold_202:1016200..1016573- (Clytia hemisphaerica)
TGTTGGAGGATTTTTGGTTGTGGTTGTAGGCTTTATCGTGGAAGAAAATC
TCGTTGTTGAAGGATTATGTATTGTGGTAGTGGACTTTGTCGTGGGAGGA
AGTCTCGTTGTTAGAGGATTTTTGGTTGTGGTTGCAGACTTTGTTGTGGG
ACGAAGTCTCGTTGTTGAAGGATTCTGTGTTGTAGTAGTGGACTTTGTCG
TGAGAGGAAGTCTCGTTGTTGGAGAATTTTTGGTTGTGGTTGCAGGCTTT
GTTGTGGGAGAAAGTATCGTTGTTGAAGGACTTTTTGTTGTCATAACTGT
TGATGAAATAGATGGGGTGATTGATAGAGTAGATATTGGTTTAGTCTTGG
TTGTGTAGGGTGTTGGTGGTGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032696XLOC_032696Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051654-exon-scaffold_202-1575043694:1016545..1016573TCONS_00051654-exon-scaffold_202-1575043694:1016545..1016573Clytia hemisphaericaexon
TCONS_00051654-exon-scaffold_202-1575043694:1016200..1016328TCONS_00051654-exon-scaffold_202-1575043694:1016200..1016328Clytia hemisphaericaexon
TCONS_00051654-exon-scaffold_202-1510915933:1016545..1016573TCONS_00051654-exon-scaffold_202-1510915933:1016545..1016573Clytia hemisphaericaexon
TCONS_00051654-exon-scaffold_202-1510915933:1016200..1016328TCONS_00051654-exon-scaffold_202-1510915933:1016200..1016328Clytia hemisphaericaexon
TCONS_00051654-exon-scaffold_202-1491911889:1016545..1016573TCONS_00051654-exon-scaffold_202-1491911889:1016545..1016573Clytia hemisphaericaexon
TCONS_00051654-exon-scaffold_202-1491911889:1016200..1016328TCONS_00051654-exon-scaffold_202-1491911889:1016200..1016328Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1016200..1016573 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051654 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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