TCONS_00051871 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051871
Unique NameTCONS_00051871
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051871 ID=TCONS_00051871|Name=TCONS_00051871|organism=Clytia hemisphaerica|type=transcript|length=3559bp
TTTAGGGGGAAAAGCACAATAGAATGCCTCCAAAAAGCAACTCTCTTGCG
TTTCTGTACAAGCCTTTGGGTTGGTTTCCAGTAATAATCATAAATGCTAT
TGCAGTCTGGTCATACTTTGCGTATGTTGTTATTTTGTGTATCGACAATG
TTGAAAGTTCAACAGAAAAAGCTATCATGTTGATACTTTATCATCCATTT
TTCGTGATGTTTATGATCGCATATTGGCAAGCTATCATGGGAAGACCTGG
GTATATGCCCAAATCATTTATGCTGAcatatgaaaattttgaaagatatg
AAAATTGTgacAATCCTCAAGAGGTATTGAAGGACATTGCAAAAGACTTA
CCAGTTGTAACATATGCTAATAATGATACTGTCAGATTTTGTGATACATG
CCAAGGAATTAAGCCAGATAGATGCCATCATTGCTCCATGTGTCAACAgt
gtGTTTTAAAGATGGATCATCACTGTCCATGGGTCAACAACTGTGTTGGA
TGGGGAAATTATAAATACTTTGTACTCTTCTTATTTTATgcaattttata
cacaatgtATGTTGCATTATCCTCACTAAAATACTTTATCAAGTTTTGGT
CGGGCGGACATCACATGAAAGTCAGCAGTAACCTACAcgttttattccta
ttttttgtGGCAGCCATGTTTTCAATAAGTTTATGGTCATTATTTGGGTT
TCATATTTATTTGCTACTATCCAATCGTACAACTCTAGAATCATTTCGAG
GTCCAATATTTCAACATGGGCCAGACAAGAATGGCTTCAATCTTGGACGT
TCCAACAACTTCCGACAAGTGTTTGGAAATAATAAATGGAAATGGTTCCT
ACCAATATTCACAACtcCGGGTGAAGGTGTTGAATTTCCTGTACGTATGT
CGACCTCACAACAAGTTTAGCCCTTTGGGATTCGGATGGGCTTGGCAATG
GATATAAATATCCCACATCATTTAGTCATGGAAGTGGTGGAGTTGCCAGG
AATGGAGAATCCAAAGGCCTGCTTTACATTGATGAATCCAACGAGCGTGA
CAATCTCTTGGATTATGAAGAACCATCAGCAGTGTATACTGGTGCTACAT
TTGTCAATGGTGGAGATATCAAGTTGAATGGTTATCTGGATGGGCCTGGT
GATGGGGAGAGGAATAGATCTGTATCAGATTCTGATGACAGTGACGAGGA
GATTGCATTTGATTTGTCACAACATAAGAGGAATAATGGTCAAACCAATG
TTGATATGACAACTCTATTAAGGACACGCACTGATAATCAACAATCTTGA
AAATATCTGGGTAGTACATTTCACCTTATTTCTGGTGGTTACTTTTGTAT
TCTTTTTTTGGACCGGggttgcttcatttttttatagTTTGCTTATTAAA
GAGgttaaataattttcattcCTTTTCAATATTCTATAGGAATTACCAAA
AATCCACGACCGCTCTataatgaattttcttttgtattaGAACATAAATT
CTTTAAGAATTACCCCttatcatcaacatgaaaaatatgagctaTCTGAT
TGACTCAAAACGCGTACATAAAacctgtatttcatattgtaccgtaaaaa
tacaagaccgcgttcaaaaaaggagtctggtaagcgagagatcatatttt
gtacaattttattcccaaaattttttctttttcttatcaATTAATTTTCC
AATCAAAAGAATGAATGATTTGATCATTTTAATGAccgttcgattttttt
ttcgaatgttttgatgtcgatttcatctaaataaaaggaaaagaaaaaaa
gattttaagagaaaaaacaaaacaaagaaaaagagacaCAAATggagaga
aaaaaagtttgttgatatttttcaagttgacgataaaccagttaCTTTTA
CTCGTACAATACCGGTACCGTGCTATAATTATTACATAACATTAACAAGC
ATTTTTGACAATTAGTTCATTTAAAAAGGGACCTGTTTATTTTTAACAAG
ACTgagaattttatttcttttcgaGTGTTTTTCGTCACTCGCCGCAATTA
GATTCAGTTACTGTTGAATTTTGTATTGCGTCATTTTATTCTGCCTGTTA
CACTTGTGAAAAAACTGCCAATTTTGTGcgatttatttattaaaaagcAT
AGTTTGCTGACCATGACAGATTTTCCTACCCGAATTTTTAcacaaagttt
atttttcttgcgTTCGTAATTAATCATTTCAAAGCATTTCATCTCGTTTG
TATTTATGtaaatcgattttttttttcgaatttaattttttaatgaaaag
tttTCTTGATTGAAAAAGTAATGACTCCCAAACAAGAATTTGACTTTTGT
ATTCGATTCTATCTTCTAAGTTTCAAGTActtgaaaaattgatgacgttt
ttttcaaaatcttgtggATGCAGGAAAAGGATTTGATTTAACGGAGTTTT
CTGCAGGGAGAGTTATGTAGATAAATACAAACTATTTTGCAACAATTATT
CTGaatgtttgaatttttcttgtgtttgtgtttaaaaattttcctcgtaa
taaatatataaaatccaagaaataataaaatctagccaaaaaaataacaa
tatttaCACTATCTATTTATTCATTAATTTATTGTATAAAGTTATCCTTT
GTTTATTGCAGAATTTATACTTCCGCGATAGTTTTTCGCCTAAGAATGCA
GTTAAGATGTAATAACTGCTTTTAGGTAATGTCTCCATGCTCTCTAAGAT
ATAGTCTAGTAGATACAATGGTGCAGAAAGATCGTTAGTTGTAGCAACAT
ATTCTTCGCTTTTTAATAACCCCATAAACATGAAAGCTCCTATTgcaaat
tgattgaaattttcgTCTGTTATTTTCTGTATAATGTGCTCTTTTGTTAA
ATCTTTGCTTCGTTCTTTATCCAAATGCACCAGATATGTGCTCAGCTTCT
CAAAAGCTCTATTCATAAGCGAATCAATGTTGGTTGTATCCTGTGACAGA
GCTCTCATTTTTGCATGATAACATGCTTCGACGAATTCTACTCTCTCTTT
ATGATGCTTAGAAAGATTCTCCGATGGCCTGAttaagaaataaacaaaag
tttGTATGGTGTGTGCGTCCAAGTCATTGTGTTGTATGAGGTGAGTCAGG
TATCGTAAAAGTGTTTTCACGTTGATATTATTTGGTACTGGGTGTTCAGA
TTTAATGACACCAAGATAACACAAAAGGTCGTTGAGTACTAACGCAAATT
GATCCATATCCTGGTGTGAGAGCAGTTCGTATAATTTAAATCCATTATCG
GTTTGATCATGGTCAAACTCACTAGTTGAAAGGTGTAGATAATATATGGT
GTATACgtttgtgttgtgtattttcttCTTTAGTAAGTAAGTGCATTGAT
GGTGATCTTTGAAACGTAGAATCCTTGTGATTGTCGAAATTTGATTGTCC
TCCAGTTCGGTCAATAGtcctaaaattttgaaaaggcaGATTGGAACTGT
TAAATGAACGTAATGATTTTTAATGGTCTCGATAACGAGAAAGAGCAGTG
GCAACTACG
Run BLAST on NCBI

transcript from alignment at scaffold_205:244079..255302-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051871 ID=TCONS_00051871|Name=TCONS_00051871|organism=Clytia hemisphaerica|type=transcript|length=11224bp|location=Sequence derived from alignment at scaffold_205:244079..255302- (Clytia hemisphaerica)
TTTAGGGGGAAAAGCACAATAGAATGCCTCCAAAAAGCAACTCTCTTGCG
TTTCTGTACAAGCCTTTGGGTTGGTTTCCAGTAATAATCATAAATGCTAT
TGCAGTCTGGTCATACTTTGCGTATGTTGTTATTTTGTGTATCGGTGAGT
ATATTTAAATATTTGGCCATTCAAAAAATATTTCTTCACCCATTTCGCTT
TTTATCAAAAAGTAACTCCCACATCCAGAAAAATCATAAAAAACACCTTG
GTTTTTGTGATTGTAAATGTAAAATGGCTTGTGTAAAGGTTGCCAAACTG
TCAGTCAAGATTGACAAAGTAACCTAATGCCTAATACCATAACTTGGTCT
AATGTCGACACCCTCCTCTAAATTCCGACACCCTTTTTATCAGCTGAAAT
TTATAGAAAGGTTGAAACTGTTTTTCTTTGCTTAGTGGTCAGAGAGGAAT
AATCCTTTTTCAATCAGTGATTCAAACTTTCATATCATTCCTTTCTCTAA
AGAAGGGTGTCGGAATTAGCCCACTGAGCAAAGAAAAACAGTTTCAACCT
TTCTATCAAGTTCAACTGATAAAAAGGGTGTCAAAATTAGAGGAGGGATG
TCGACATTAGACCAAGTTACAGTATCGTGAGATCAGGTAACTTGCATCAC
TGAAGGCTAACATGCATAGCCCTCAAATGAATGACCTGTCTGGTTGGCAT
GCAAACATTCTCCTGAATGCAACGGGAAGTTCCGGAAAAAAACCATTACC
TCCCTGTGGTGGATGACAGGGTTTTTGGATTTTTTTTCTTTTAGAAATCC
TGAGAAATTTGAAGGTTTTGGAAAATCCAGGATTTTTCCTCATTATTTAG
TTATACTCATATGTATCGGAAAATATATAAAATTTTCTCTGTTTTCTTGC
CAAGTTTAATCCATAAAATTTGCTCTATTTTCTTGCCAAGTATCGGAAAA
TCCAAGATTTGCCCATGAAAAATCTTGAATATTATGGAAATCCTGAAGTT
TTTCAAAAGTAAATTGCTACGGAAAATTGATGTCGTCCACGGGAGTAACG
GACTATAACTTGAACCGCCCAATAACGCTGCAATAACGCTGCGAATCTTG
AGTCAAAAGTCACGTTCTCCCAAAANCCGCCTAATAACGCTGCAATAACG
CTGCGAATCTTGAGTCAATAAGTCACGTTCTCCCAAACAACTATAATCAA
AAGCTTGATTAATGCAAAAGCATAATTTGGTAAACTGTTGTACTAAACGT
TTTGGTGCTGGAGACAGTGGAGTTCTAAACACATTCAATTTGATGTTTCG
GTAAAGGGTTTGTTGGTCCAAGTCACAGGTCATTACGCTAGACATCAAGA
CTAAAAATCTATTTTCTACAAAAAAAAGTGAAGTCACTGACTTGAGGTGT
AGATTTTGAAGGAAAAAATGAAAAATGTTTCCTTGGGCTAACAGTTAAAT
AGTAAAAAAATAACAAGCTTTTCGGTGTTATGTGAAAGGTGATTTTTAGG
TTTTTTTCCTTTGTATGAGCTAGTAGAGGAATATAGTTGTTTGGGAGAAC
GCGACGGTCTTTTGCATAACTAATTACTCCACATTTCTGTGGATTCAAGT
AAAACAAGCAGAAAATTAGATATTACCTATAAATAATTTTTTTCTCAAAT
TGGCACGCTAATATTCTCTCGAATTAGATGCGAATCTTCCCATGCTACGT
CCTATAAAGTATTAGCTCNTTTTCTCAAATTGGCAAGCTAATATTCTCTC
GAATTAGCTGCGAATCTTCCCATGCTACGTCCTATAAAATATTAGCTTGA
GTATTAGGATTTTATTTCTGTAATACAGCCCAGATAATTTCTGGCTCGAA
TGGATGAAATTAGTTTTTTAGCTTTGTAAAATGGGCTTACCTGTCTGTTT
AACTCAATCCAATCAAAAGTTTTGATATTTTTTGTCATTATTATGTCATA
ACTTTACTAAAAAACAGTAATTCTTGAAACAGTCTGCATTCAATGAACCC
TCTATTAATTGATTATTTAAATTCTCTTTTGTATTTTAGACAATGTTGAA
AGTTCAACAGAAAAAGGTCAGTATTCAGTGGTCATACCGGCTGAGCCATG
AAAGGAATAGGTTTTCAATGGTCTTTTTCCATATGTTTCAACAGTTTTAA
AATTATGAGGTTTTAAAGTCAAAGATCTTTTTAAAAATTCCAAAATCCAT
GATAAAAAGGTATTACGCATTAATGTACTAACATTTCATTTTGATCCCTT
GGAAATAACTTAAGTATCTTCAAAGAGTTTGCTATCATGTTTTGCAGTGT
TCTTTTTAATGCAGGTTTTGTCATTTAAAAACTACAGTTGTGTGCTCAAT
CACACTCCTAACTCTGAGTTTTGCTAATTTAGATGTGTGATAAGGCATGC
TATTAACCACTTTTAATAGTCAAGTCTAAATTTATGATACATGGTTGCTT
GCACTCCTCAGAGATTTTAAGTGTGTGTTGAGTTGTGTGGCTATTAACAA
TTTAACCGGCTACTGTAAATTATGGTAATATTGTAAATTACATAAATCCA
TTCATATTGTTGGATTTTGTTTTATCTCAGCTATCATGTTGATACTTTAT
CATCCATTTTTCGTGATGTTTATGATCGCATATTGGCAAGCTATCATGGG
AAGACCTGGGTATATGCCCAAATCAGTATGATTCAAATTTTTTATCTCTT
TTACTATATACTGTTTTTACTTATAGATTGTCAATAATTTGTTAACTTGT
TACAGGGTTAAAACATTATTAACTAGACCTTCTAAAGTTTTCCTTGTTTC
TTCTTCTAGTTTATGCTGACATATGAAAATTTTGAAAGATATGAAAATTG
TGTAAGTAAATAAATCATTTAAGCCATGAAGATTACTAAACATTTTCTTG
ATAGTAGAGTAATCAATTTCTTGTAAGGGAAAAAAATGCTAGAGTTTTTT
TTGTGCTGTATTACTCTCTATTTGGTTTTGGTCTCCCAAAGGTTTGTTGT
TTTTAAAACTTCCACAAAATAATTGAATAACCGTTTGAAGGGAGAAATGT
TGTCTGCTTATTGAATTTTATGAAAATAGCACTCTACTAAACTTTTCAGA
ACATTCCATGCATACTGATTTGTATTACTTGACAGCTTTAATATATATCA
AAAATATTTTAGGACAATCCTCAAGAGGTATTGAAGGACATTGCAAAAGA
CTTACCAGTTGTAACATATGCTAATAATGATAGTGAGAAATTTATACATT
TGTTTGTTGCATGCACAAACTACCTTATAATCAAATACATATCTGGGTTG
TGGGATGTGCATACTTGTGCAAATTTTTTGTTATTGATTTGATTATAGTT
AAAAGGACTAGTTTTAGAACTAAGTCTTTTTTATACTACCCTAAAATCCC
AATGCTTTTTACATCCCTTGTATTTTCATGCCTTAAAAATGTGTGAAAAT
TGCAGGCACCTCACATGCTCAGCATTAACTTTTGGACGCATCCCTGTGAT
TTTGGGAATAGTGCTGGCAGGGGGGGGGGTCATGCAGTTATTATATAAAC
ACTATGACAATTACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCG
GAAGCAAAAAAATTCAAAACATTTTTTTCAAAAGTCAAAAAAAAATCACA
AAATTTTTTCTTCAATCAAGGCATGAAAGATATTTTAACAAACTTGAGAT
ATGATTGAGATATTTAACTCTTGAACAGTCGTTAATAAGACGTACCCAGT
AAAATGGTATCAAAAATGAGGAATAGTGAAAAAATTGCCAAATTTGGCAT
TTTTGGGGGTGGTATACACCAATTTTGAGGGTAAAATCAGTTAGTACACT
ATGGGATAACTGCGAGGGTGGTGGTGTCTGTAGAAAATGTCCAAAATTGC
AGTTACTCCACATAGTGTCAAGGAGTAACTGCAAGACCCCCCTGGGCATG
TTCCTCATCAATTGAGCACTAAGTTTATAAAATTATCATAATTAGTAATT
GGTGATGATTTTGACCTGCAAATTGTTGAAGCTTAAAAACATAGTGTTGT
TTTAAGTTTACATAGCCTGGTTGCTAAGATCAATTTTAAATGACCAGCAG
ACTGATAGAACGATAAACCTTTTGCAATCTTTACTTTATAGCTGTCAGAT
TTTGTGATACATGCCAAGGAATTAAGCCAGATAGATGCCATCATTGCTCC
ATGTGTCAACAGTAAGTCTTGTTTCTTATTTACCTTGAAGGAAACTACTT
TTTCTCCCCATTTAACAGCAAAAAAAAGTTTCCTAAAAATTTTTCACATG
CATGTTAAACTTTACAAAAAACTGCATTCAGTATTCAGCTCCTCTGCTTA
AGGTATTTTTTTTCTGTAAAAATGTATTTAAAAAAATTTCATAGTATATT
TACTGTTTTTCAGTTGACAATCCAAAATTAAGCTCTCCAATAAATCTCGA
GCCATTGTGTTTTTTTTTCAGGTGTGTTTTAAAGATGGATCATCACTGTC
CATGGGTCAACAACTGTGTTGGATGGGGAAATTATAAATACTTTGTACTC
TTCTTATTTTATGCAATTTTATACACAATGTATGTTGCATTATCCTCACT
AAAATACTTTATCAAGTTTTGGTCGGTAAGTATGATTTTTTTCTGACTCA
ACTTCACTAAACACTTTTTACACAGTTTTACAATATCTGTTTGACCTAGT
TATAATAATTAGCTTTGAGTTACCAAACTGCCATATCATTAATTTGCTCA
CTCAGGCAAAATTCCAAGCACTGGCCATTTTTTGACTTAAAAATTGAGTT
TTGGCCTACAGAGTACTGTAACCATTGTAGGTGGTTGATACGCGCTGCAG
TGACCAAAATTTTTCAAACCACATGTAGGGCACTTTTGAAAGGTTTATTT
TCAGGGATTAAGCATTGTAATTGCGAAAGTGTAAAGAAATGTACTGAATT
GAATTTATTTTCGATCACCATAAAGAGAATATATTTTGATTTTGCTCACT
ATCACATCTGCATCTTTTTGACATTTTTAACAACAAAATAAAAATTCTCC
AAATATTGAGTTTTATAACTCAATTCAAAATTGATTATTTTGGTCGTATA
ACGGCCACAAAAAAGTGCTTGGAATTTTCACCATCACTGCATTTATCAAA
CCTATTGTTGGGCTTATTTTTTGAAACCTTCAAAATGATTTTTTAATTTT
AATGTTTTTTTACAGGGCGGACATCACATGAAAGTCAGCAGTAACCTACA
CGTTTTATTCCTATTTTTTGTGGCAGCCATGTTTTCAATAAGTTTATGGT
CATTATTTGGGTTTCATATTTATTTGCTACTATCCAATCGTACAACTCTA
GGTGAGTGTTGACATACCATATAATATCACAATTTCAATTTGTTTGAACT
CAATCGAGGCTGTTTGGGTTGATGTGTAAAGCCTCGAAAATTATCTACTT
ACCTAAAGCAACTTTTTAAGGTTGTTGTTAAAATTAAAAAAAAAGGTTTT
TGGGGAAATCAACCCTTAAATTCTGTCTAAAATGCTCGTAATTAGGATCT
CCTTGAAAAAGAAGCAATCTACCCAGCCATTTGCTAAAATTAGGTCTCGT
CAGAATTGAAAAATTGCATTATTTGCCAAATAAGTTTCTGCAAAATTTAA
TTTTTTTTAATTTCTATTTTTTTGCCAAAATAAGATCATACCAAAAATTA
GTTCCTTCAAAGGATTAAAACATATGGGCTCTTTCTCCATTCTTTTCTAT
TACTAACTTATTGGACCAAATTTTCAAGCAAAGGCGACACCTATCAAAGT
TTTTCTGACCTATTTGAAATTATAATTTTGACTTGTTGATCGTCTTGTTC
AAAGTTCAAATCTATTAAAGTATTTGTGTCAAGTTTATTAACTATAACTC
ACTTTCAATTTGTCTCTTTCTCTATCTAGAATCATTTCGAGGTCCAATAT
TTCAACATGGGCCAGACAAGAATGGCTTCAATCTTGGACGTTCCAACAAC
TTCCGACAAGTGTTTGGAAATAATAAATGGAAATGGTTCCTACCAATATT
CACAACGTAACTTTTCGATTACTTTAATTCGTTTATACGTCTTCCTATCA
AGGGGATGTCTAACCATTCGGTCAAAAGATGATTATTTGCAAGACTTTCG
GATTTAGCATTGCTTTATAAAATCCATCAACATGTTTTCATTATATTCAT
GACTTTCGACTTGCACTCATCTTTATGGGAAATCAAGGAACTTTAATCAA
ACTTTTATTTAAGTTTCTTGGGAAAATCCACTGCACTGATATACATCGTG
TCCGAAATAAAACAGTCAACTTAAAAAACGGTTCTCAAACAATCAATTTT
TTGATTTTTTTTCTCAGTATTTTAAAAAGACTTGGTAATCAAACTATATT
AGTGAACAAATATTTTATGATAACTATTGTTGACGTTTTATTTAGTACAC
ACTGTACAGGTTGACATCTAAGTTTCTCATGTTTTTATTTTTCTTTAGTC
CGGGTGAAGGTGTTGAATTTCCTGTACGTATGTCGACCTCACAACAAGTT
TAGCCCTTTGGGATTCGGATGGGTAATTAACCAATTTTTCGATTAACCCC
AGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTGTGTTCTGA
ATGATTGTTTCATGGTCACGCTTATGTAGATATCAATTATATATGTGTTA
AATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTCTATTACTAAC
TTATTGGACCAAATTTTCAAGCAAAGGCGACACCTATCAAAGTTTTTCTG
ACCTATTTGAAATTATAATTTTGACTTGTTGATCGTCTTGTTCAAAGTTC
AAATCTATTAAAGTATTTGTGTCAAGTTTATTAACTATAACTCACTTTCA
ATTTGTCTCTTTCTCTATCTAGAATCATTTCGAGGTCCAATATTTCAACA
TGGGCCAGACAAGAATGGCTTCAATCTTGGACGTTCCAACAACTTCCGAC
AAGTGTTTGGAAATAATAAATGGAAATGGTTCCTACCAATATTCACAACG
TAACTTTTCGATTACTTTAATTCATTTATACGTCTTCCTATCAAGGGGAT
GTCTAACCAGTCGGTCAAAAGATGATTATTTGCAAGACTTTCGGATTTAG
CATTGCTTTATAAAATCCATCAACATATTTTCATTATATTCATGACTTTC
GATTTGCACTCATCTTTATGGGAAATCAAGGAACTTTAATCAAACTTTTA
TTTAAGTTTCTTGGGAAAATCCACTGCACTGATATACATCGTGTCCGAAA
TAAAACAGTCAACTTAAAAAACGGTTCTCAAACAATCAATTTTTTGATTT
TTTTTCTCAGTATTTTAAAAAGACTTGGTAATCAAACTATATTAGTGAAC
AAATATTTTATGATAACTATTGTTGACGTTTTATTTAGTACACACTGTAC
AGGTTGACATCTAAGTTTCTCATGTTTTTATTTTTCTTTAGTCCGGGTGA
AGGTGTTGAATTTCCTGTACGTATGTCGACCTCACAACAAGTTTAGCCCT
TTGGGATTCGGATGGGTAATTAACCAATTTTTCGATTAACCCCAGCCTTT
CTGTACCTATATGTTTGACAGTTGTTGTCTAAAACGCATTACTATTATGT
TCATCATGAAGTTAAAACATAAATTGTAACAGATTGTAATAATATTTTAA
TTAACACAGAATATGTTGATAACAAAGGTACAGCATAAGATTAATACTGA
ATAACATAATTTAGCAATTTTAACTTTTAAACCTTTTTCGATTGCACTTA
AAGCATAGATTTAATTTGTAATAAATTTAAAATTCCCTAGAATTAATAAG
AATTATTATTTACAATAGCTTTTTATTAATTAATGCTAACTGTCATTATG
CTTAATGCCTTGTAAATTTGTACATTTAACTATGGGAAGTTTCAATTTAG
GAGCCATTAAGAATCTTGGAAACTCTTGACTTCAATCCTTTGTTTATTCT
CTAGGCTTGGCAATGGATATAAATATCCCACATCATTTAGTCATGGAAGT
GGTGGAGTTGCCAGGAATGGAGAATCCAAAGGCCTGCTTTACATTGATGA
ATCCAACGAGCGTGACAATCTCTTGGATTATGAAGAACCATCAGCAGTGT
ATACTGGTGCTACATTTGTCAATGGTGGAGATATCAAGTTGAATGGTTAT
CTGGATGGGCCTGGTGATGGGGAGAGGAATAGATCTGTATCAGATTCTGA
TGACAGTGACGAGGAGATTGCATTTGATTTGTCACAACATAAGAGGAATA
ATGGTCAAACCAATGTTGATATGACAACTCTATTAAGGACACGCACTGAT
AATCAACAATCTTGAAAATATCTGGGTAGTACATTTCACCTTATTTCTGG
TGGTTACTTTTGTATTCTTTTTTTGGACCGGGGTTGCTTCATTTTTTTAT
AGTTTGCTTATTAAAGAGGTTAAATAATTTTCATTCCTTTTCAATATTCT
ATAGGAATTACCAAAAATCCACGACCGCTCTATAATGAATTTTCTTTTGT
ATTAGAACATAAATTCTTTAAGAATTACCCCTTATCATCAACATGAAAAA
TATGAGCTATCTGATTGACTCAAAACGCGTACATAAAACCTGTATTTCAT
ATTGTACCGTAAAAATACAAGACCGCGTTCAAAAAAGGAGTCTGGTAAGC
GAGAGATCATATTTTGTACAATTTTATTCCCAAAATTTTTTCTTTTTCTT
ATCAATTAATTTTCCAATCAAAAGAATGAATGATTTGATCATTTTAATGA
CCGTTCGATTTTTTTTTCGAATGTTTTGATGTCGATTTCATCTAAATAAA
AGGAAAAGAAAAAAAGATTTTAAGAGAAAAAACAAAACAAAGAAAAAGAG
ACACAAATGGAGAGAAAAAAAGTTTGTTGATATTTTTCAAGTTGACGATA
AACCAGTTACTTTTACTCGTACAATACCGGTACCGTGCTATAATTATTAC
ATAACATTAACAAGCATTTTTGACAATTAGTTCATTTAAAAAGGGACCTG
TTTATTTTTAACAAGACTGAGAATTTTATTTCTTTTCGAGTGTTTTTCGT
CACTCGCCGCAATTAGATTCAGTTACTGTTGAATTTTGTATTGCGTCATT
TTATTCTGCCTGTTACACTTGTGAAAAAACTGCCAATTTTGTGCGATTTA
TTTATTAAAAAGCATAGTTTGCTGACCATGACAGATTTTCCTACCCGAAT
TTTTACACAAAGTTTATTTTTCTTGCGTTCGTAATTAATCATTTCAAAGC
ATTTCATCTCGTTTGTATTTATGTAAATCGATTTTTTTTTTCGAATTTAA
TTTTTTAATGAAAAGTTTTCTTGATTGAAAAAGTAATGACTCCCAAACAA
GAATTTGACTTTTGTATTCGATTCTATCTTCTAAGTTTCAAGTACTTGAA
AAATTGATGACGTTTTTTTCAAAATCTTGTGGATGCAGGAAAAGGATTTG
ATTTAACGGAGTTTTCTGCAGGGAGAGTTATGTAGATAAATACAAACTAT
TTTGCAACAATTATTCTGAATGTTTGAATTTTTCTTGTGTTTGTGTTTAA
AAATTTTCCTCGTAATAAATATATAAAATCCAAGAAATAATAAAATCTAG
CCAAAAAAATAACAATATTTACACTATCTATTTATTCATTAATTTATTGT
ATAAAGTTATCCTTTGTTTATTGCAGAATTTATACTTCCGCGATAGTTTT
TCGCCTAAGAATGCAGTTAAGATGTAATAACTGCTTTTAGGTAATGTCTC
CATGCTCTCTAAGATATAGTCTAGTAGATACAATGGTGCAGAAAGATCGT
TAGTTGTAGCAACATATTCTTCGCTTTTTAATAACCCCATAAACATGAAA
GCTCCTATTGCAAATTGATTGAAATTTTCGTCTGTTATTTTCTGTATAAT
GTGCTCTTTTGTTAAATCTTTGCTTCGTTCTTTATCCAAATGCACCAGAT
ATGTGCTCAGCTTCTCAAAAGCTCTATTCATAAGCGAATCAATGTTGGTT
GTATCCTGTGACAGAGCTCTCATTTTTGCATGATAACATGCTTCGACGAA
TTCTACTCTCTCTTTATGATGCTTAGAAAGATTCTCCGATGGCCTGATTA
AGAAATAAACAAAAGTTTGTATGGTGTGTGCGTCCAAGTCATTGTGTTGT
ATGAGGTGAGTCAGGTATCGTAAAAGTGTTTTCACGTTGATATTATTTGG
TACTGGGTGTTCAGATTTAATGACACCAAGATAACACAAAAGGTCGTTGA
GTACTAACGCAAATTGATCCATATCCTGGTGTGAGAGCAGTTCGTATAAT
TTAAATCCATTATCGGTTTGATCATGGTCAAACTCACTAGTTGAAAGGTG
TAGATAATATATGGTGTATACGTTTGTGTTGTGTATTTTCTTCTTTAGTA
AGTAAGTGCATTGATGGTGATCTTTGAAACGTAGAATCCTTGTGATTGTC
GAAATTTGATTGTCCTCCAGTTCGGTCAATAGTCCTAAAATTTTGAAAAG
GCAGATTGGAACTGTTAAATGAACGTAATGATTTTTAATGGTCTCGATAA
CGAGAAAGAGCAGTGGCAACTACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032824XLOC_032824Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051871-exon-scaffold_205-1575043694:255159..255302TCONS_00051871-exon-scaffold_205-1575043694:255159..255302Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:253237..253263TCONS_00051871-exon-scaffold_205-1575043694:253237..253263Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:252628..252722TCONS_00051871-exon-scaffold_205-1575043694:252628..252722Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:252452..252493TCONS_00051871-exon-scaffold_205-1575043694:252452..252493Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:252071..252140TCONS_00051871-exon-scaffold_205-1575043694:252071..252140Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:250542..250611TCONS_00051871-exon-scaffold_205-1575043694:250542..250611Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:250128..250281TCONS_00051871-exon-scaffold_205-1575043694:250128..250281Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:249402..249537TCONS_00051871-exon-scaffold_205-1575043694:249402..249537Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:248697..248823TCONS_00051871-exon-scaffold_205-1575043694:248697..248823Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:248181..248254TCONS_00051871-exon-scaffold_205-1575043694:248181..248254Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1575043694:244079..246698TCONS_00051871-exon-scaffold_205-1575043694:244079..246698Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:255159..255302TCONS_00051871-exon-scaffold_205-1510915933:255159..255302Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:253237..253263TCONS_00051871-exon-scaffold_205-1510915933:253237..253263Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:252628..252722TCONS_00051871-exon-scaffold_205-1510915933:252628..252722Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:252452..252493TCONS_00051871-exon-scaffold_205-1510915933:252452..252493Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:252071..252140TCONS_00051871-exon-scaffold_205-1510915933:252071..252140Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:250542..250611TCONS_00051871-exon-scaffold_205-1510915933:250542..250611Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:250128..250281TCONS_00051871-exon-scaffold_205-1510915933:250128..250281Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:249402..249537TCONS_00051871-exon-scaffold_205-1510915933:249402..249537Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:248697..248823TCONS_00051871-exon-scaffold_205-1510915933:248697..248823Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:248181..248254TCONS_00051871-exon-scaffold_205-1510915933:248181..248254Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1510915933:244079..246698TCONS_00051871-exon-scaffold_205-1510915933:244079..246698Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:255159..255302TCONS_00051871-exon-scaffold_205-1491911889:255159..255302Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:253237..253263TCONS_00051871-exon-scaffold_205-1491911889:253237..253263Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:252628..252722TCONS_00051871-exon-scaffold_205-1491911889:252628..252722Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:252452..252493TCONS_00051871-exon-scaffold_205-1491911889:252452..252493Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:252071..252140TCONS_00051871-exon-scaffold_205-1491911889:252071..252140Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:250542..250611TCONS_00051871-exon-scaffold_205-1491911889:250542..250611Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:250128..250281TCONS_00051871-exon-scaffold_205-1491911889:250128..250281Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:249402..249537TCONS_00051871-exon-scaffold_205-1491911889:249402..249537Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:248697..248823TCONS_00051871-exon-scaffold_205-1491911889:248697..248823Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:248181..248254TCONS_00051871-exon-scaffold_205-1491911889:248181..248254Clytia hemisphaericaexon
TCONS_00051871-exon-scaffold_205-1491911889:244079..246698TCONS_00051871-exon-scaffold_205-1491911889:244079..246698Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:244079..255302 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.94894	2.72379	2.01033	1.74835	6.90538	4.77424	4.68022	5.41912	3.38474	3.83222	2.5622	2.30924	2.9079	2.86036	2.41388	2.96345	2.62803	3.37389	2.50687	2.56689	2.93109	2.29372	2.20689	2.64359	2.51271	2.75574	2.69909	2.03796	1.7794	2.05302
Blast
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BLAST of TCONS_00051871 vs. Swiss-Prot (Human)
Match: ZDHC2 (Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDHHC2 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 4.029e-97
Identity = 150/307 (48.86%), Postives = 206/307 (67.10%), Query Frame = 3 
Query:   30 PKSNSLAFLYKPLGWFPVIIINAIAVWSYFAYVVILCIDNVESSTEKAIMLILYHPFFVMFMIAYWQAIMGRPGYMPKSFMLTYEN---FERYENCDNPQEVLKDIAKDLPVVTYANNDTVRFCDTCQGIKPDRCHHCSMCQQCVLKMDHHCPWVNNCVGWGNYKYFVLFLFYAILYTMYVALSSLKYFIKFWSGGHHMKVSSNLHVLFLFFVAAMFSISLWSLFGFHIYLLLSNRTTLESFRGPIFQHGPDKNGFNLGRSNNFRQVFGNNKWKWFLPIFTTPGEGVEFP---VRMSTSQQV*PFGI 932
            P S++     + L W PV+ I  +  WSY+AY + LCI ++E++ E+ + L+ YH  F MF+ +YW+ I   P    K F L+Y      ER    +  QEVL+  AKDLP+ T   +  +R+CD CQ IKPDRCHHCS+C +C+LKMDHHCPWVNNCVG+ NYK+F+LFL Y++LY +++A + L+YFIKFW+ G      +  H++FLFF AAMFS+SL SLFG+H +L+  N++TLE+FR P+F+HG DKNGF+LG S N RQVFG+ K  W LPIF++ G+G  FP   V     Q   P G+
Sbjct:    6 PGSSARRRCRRVLYWIPVVFITLLLGWSYYAYAIQLCIVSMENTGEQVVCLMAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAATDLQYFIKFWTNGLP-DTQAKFHIMFLFFAAAMFSVSLSSLFGYHCWLVSKNKSTLEAFRSPVFRHGTDKNGFSLGFSKNMRQVFGDEKKYWLLPIFSSLGDGCSFPTCLVNQDPEQASTPAGL 311
The following BLAST results are available for this feature:
BLAST of TCONS_00051871 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZDHC24.029e-9748.86Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDH... [more]
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