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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051887 ID=TCONS_00051887|Name=TCONS_00051887|organism=Clytia hemisphaerica|type=transcript|length=1047bp
ccgaattttgagctgtgaaccgcgaaattaaatttcgtgaaaattccTTT
CCATGAAAATTTCTCCACTTAAGGTAAATAATGGGAGCGTTTTGAAAATG
AGACTAGGATTGGTGTAATACATCTCTGGGTTACAGCATTTTTCAAGTCA
TCGTGGAGTAACTAATGGAGTGACTCTAAATTTACGGAACCCACAACATT
TTACCCAATGCCTAACTATAGTATATAGCTTTTTAATTATAGACGTACGC
CAGTTGATATCATTGCGCTGATTATGCCGTAATTGACGCCCAAATTTGTG
AAAATCGTAAATAAGGctaaaagaaaatcatcaaaTCGAGGATTCATAGT
AAAATTACATTGAAACTGCTGTTTTAGTTAAGTTATATGGATTTGGAGAG
ACAAATTGGACAAATTTGGCCAGTACACAGGGTTCCAGAGGAACTAATTA
TTAAGACACTTAAAAATTGACGATCAAACAAAGTTTTACCAGTTATTTGA
CTTTTGAATATAACCTCATTCGAAAGTCAATGTAAAAATTGgtctccaaa
accatccccaacGGATTTAGCTGagaataatagaatttctatccctgTCG
GGCTTTCGGTAGAGAACTATTTATTCcccctttttgaaaatgttccaCCG
GGACTGTTAGACAGGGTTGTTAAACTCCCACAATACACCTTTTATATCTT
AATGTAACTAGAAGAACTTGTTGTGAATATCACGGTGTATGAATTTTACA
TCGCCATTAGATCGCCTTAAGATCTACGCTGTAGTTTGTCGGGATCAACC
CAGCGTTTGTCTGAAATCCACGCGGGTCACGCAGGTCACgcactttaatt
ttgaaatttgtggCTTTATTTTCCAACCTAAGAGATTTCTTACTCGCCAT
TCGGGCCTCGAATTGAAGTAAATTAAAGTAATCTTAATTTAGAGCACTTA
TTAACGAAAGACGTTGGTACAATCGTGAGCGCTATTGGAATCACAAAAAG
GCGAGCTAAGGGAATGGCTTCGAGTCtgatatttcatttttcgaaGT Run BLAST on NCBI transcript from alignment at scaffold_205:324684..325730 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051887 ID=TCONS_00051887|Name=TCONS_00051887|organism=Clytia hemisphaerica|type=transcript|length=1047bp|location=Sequence derived from alignment at scaffold_205:324684..325730 (Clytia hemisphaerica)
ACttcgaaaaatgaaatatcaGACTCGAAGCCATTCCCTTAGCTCGCCTT
TTTGTGATTCCAATAGCGCTCACGATTGTACCAACGTCTTTCGTTAATAA
GTGCTCTAAATTAAGATTACTTTAATTTACTTCAATTCGAGGCCCGAATG
GCGAGTAAGAAATCTCTTAGGTTGGAAAATAAAGccacaaatttcaaaat
taaagtgcGTGACCTGCGTGACCCGCGTGGATTTCAGACAAACGCTGGGT
TGATCCCGACAAACTACAGCGTAGATCTTAAGGCGATCTAATGGCGATGT
AAAATTCATACACCGTGATATTCACAACAAGTTCTTCTAGTTACATTAAG
ATATAAAAGGTGTATTGTGGGAGTTTAACAACCCTGTCTAACAGTCCCGG
tggaacattttcaaaaaggggGAATAAATAGTTCTCTACCGAAAGCCCGA
cagggatagaaattctattattctCAGCTAAATCCgttggggatggtttt
ggagacCAATTTTTACATTGACTTTCGAATGAGGTTATATTCAAAAGTCA
AATAACTGGTAAAACTTTGTTTGATCGTCAATTTTTAAGTGTCTTAATAA
TTAGTTCCTCTGGAACCCTGTGTACTGGCCAAATTTGTCCAATTTGTCTC
TCCAAATCCATATAACTTAACTAAAACAGCAGTTTCAATGTAATTTTACT
ATGAATCCTCGAtttgatgattttcttttagCCTTATTTACGATTTTCAC
AAATTTGGGCGTCAATTACGGCATAATCAGCGCAATGATATCAACTGGCG
TACGTCTATAATTAAAAAGCTATATACTATAGTTAGGCATTGGGTAAAAT
GTTGTGGGTTCCGTAAATTTAGAGTCACTCCATTAGTTACTCCACGATGA
CTTGAAAAATGCTGTAACCCAGAGATGTATTACACCAATCCTAGTCTCAT
TTTCAAAACGCTCCCATTATTTACCTTAAGTGGAGAAATTTTCATGGAAA
ggaattttcacgaaatttaatttcgcggttcacagctcaaaattcgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051887-exon-scaffold_205-1491911889:324684..325730 | TCONS_00051887-exon-scaffold_205-1491911889:324684..325730 | Clytia hemisphaerica | exon |
| TCONS_00051887-exon-scaffold_205-1510915933:324684..325730 | TCONS_00051887-exon-scaffold_205-1510915933:324684..325730 | Clytia hemisphaerica | exon |
| TCONS_00051887-exon-scaffold_205-1575043694:324684..325730 | TCONS_00051887-exon-scaffold_205-1575043694:324684..325730 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_205 | supercontig | scaffold_205:324684..325730 . |
Blast
The following BLAST results are available for this feature:
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