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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052009 ID=TCONS_00052009|Name=TCONS_00052009|organism=Clytia hemisphaerica|type=transcript|length=1304bp
TCctttctttcttgttttttacTCTTTCTTTTTCGGTACCGTTTTCTCTG
TTTTTGGTTGATCCTTCGCTCTTTGTCGTTAAACCATTTCAAAACAGCCT
TCTCGCAATATTTCTCAATAAACACTTTCAATGTTGGTCCTGTCACTTTA
ATTCTTAACAGAGAGGTCAGATTTTTCTCAGACAAACAATTCCTCCAGTC
AGTTTTGACAATGTGCATCTGACTGAAGAAGCGTTCAAGTGATGCATTTG
ACGATGGTGCACAGAAACAAAGCTCGGCTATTAAGAAAATATCCGACCAG
CCACGTTCAGTTTTTAAGGCGTAGAGGAGCTGCCACATTTTAAGCGGAGG
GTAAACCAAATGATTGTAATGCTTCATGGTGTAAATGACGAGACCTATGT
ATTGCTCTATGACGGTTTCAAGTGTGATGTTTGGTGATGCCTTTCTTAAG
GGTGCCAAGTAGTGATTAAAGACTGTTGTTAAAGCTTTTAGGCTTTTACA
AAGCACAAGCTCAACATTATCAATGGTAGGTGATGTGTCCTCTGGTGGAA
TCCGCTTTTGAGAATCAATCACAAGGCATATATCACGAAGAATAGCGTCG
CCAGCAAGTGGTGTGCCACTGACATCCTCTTGTTGATCTTGTTCGTCTGA
TAATGCAGCAAATCTTTCAGTTATGGCATCAAGGATAAGATCGATGTATT
TGGTAGTGTTCCTTTGAATACTTTCCTTTTctctttcaaaatattgaagt
tTGATATCCTGGTACTTGAAGACTCTTTCCCCATTTTCATTGACTTCCTC
CTTAATGGTTGAAAGGACCTTTTGAAACGTTGGGAGATTTGAGACGTTTT
CAGGATGTTTCTCAAAACGCCTTTTCATCAAAGAATATGTCAAAAACATA
TCATCGATTGCTTCTACCATTCCAAGAATGTTGAAGTTCTCCTTTTGAGA
AATAAGGCTGAACTTCAAGGCAGGATCCAACAGGTCAAAAAACAGGCCAC
AGCGAAGTAAAACATTGGCATCTGTCAATAACCTTCGTTTCCCTTCCAAT
GTTGCTTTGTCGGTTTGCTTTGAAGTATCTGCTATCACATTCTCAAAATG
TTGCAAGTAAAGTCCAAACTTGTCTATCAACCCAGACATACTACGCAGAA
CGTGGGCAATCCAACGGGTACCAGTAGCTTTAGTTGGCTTTACACAGTTA
TCAGAAAATTCATACATTTCCTTAAGAACATTATGAAGCTTTCGTAATTC
CCtgagcttttttgaagatttttggtACAGGTAAAAAAGATTCGTCaagc
tttt Run BLAST on NCBI protein sequence of TCONS_00052009-protein >TCONS_00052009-protein ID=TCONS_00052009-protein|Name=TCONS_00052009-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
KSLTNLFYLYQKSSKKLRELRKLHNVLKEMYEFSDNCVKPTKATGTRWIA
HVLRSMSGLIDKFGLYLQHFENVIADTSKQTDKATLEGKRRLLTDANVLL
RCGLFFDLLDPALKFSLISQKENFNILGMVEAIDDMFLTYSLMKRRFEKH
PENVSNLPTFQKVLSTIKEEVNENGERVFKYQDIKLQYFEREKESIQRNT
TKYIDLILDAITERFAALSDEQDQQEDVSGTPLAGDAILRDICLVIDSQK
RIPPEDTSPTIDNVELVLCKSLKALTTVFNHYLAPLRKASPNITLETVIE
QYIGLVIYTMKHYNHLVYPPLKMWQLLYALKTERGWSDIFLIAELCFCAP
SSNASLERFFSQMHIVKTDWRNCLSEKNLTSLLRIKVTGPTLKVFIEKYC
EKAVLKWFNDKERRINQKQRKRYRKRKSKKQERK Run BLAST on NCBI transcript from alignment at scaffold_208:90282..91585 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052009 ID=TCONS_00052009|Name=TCONS_00052009|organism=Clytia hemisphaerica|type=transcript|length=1304bp|location=Sequence derived from alignment at scaffold_208:90282..91585 (Clytia hemisphaerica)
aaaagcttGACGAATCTTTTTTACCTGTaccaaaaatcttcaaaaaagct
caGGGAATTACGAAAGCTTCATAATGTTCTTAAGGAAATGTATGAATTTT
CTGATAACTGTGTAAAGCCAACTAAAGCTACTGGTACCCGTTGGATTGCC
CACGTTCTGCGTAGTATGTCTGGGTTGATAGACAAGTTTGGACTTTACTT
GCAACATTTTGAGAATGTGATAGCAGATACTTCAAAGCAAACCGACAAAG
CAACATTGGAAGGGAAACGAAGGTTATTGACAGATGCCAATGTTTTACTT
CGCTGTGGCCTGTTTTTTGACCTGTTGGATCCTGCCTTGAAGTTCAGCCT
TATTTCTCAAAAGGAGAACTTCAACATTCTTGGAATGGTAGAAGCAATCG
ATGATATGTTTTTGACATATTCTTTGATGAAAAGGCGTTTTGAGAAACAT
CCTGAAAACGTCTCAAATCTCCCAACGTTTCAAAAGGTCCTTTCAACCAT
TAAGGAGGAAGTCAATGAAAATGGGGAAAGAGTCTTCAAGTACCAGGATA
TCAaacttcaatattttgaaagagAAAAGGAAAGTATTCAAAGGAACACT
ACCAAATACATCGATCTTATCCTTGATGCCATAACTGAAAGATTTGCTGC
ATTATCAGACGAACAAGATCAACAAGAGGATGTCAGTGGCACACCACTTG
CTGGCGACGCTATTCTTCGTGATATATGCCTTGTGATTGATTCTCAAAAG
CGGATTCCACCAGAGGACACATCACCTACCATTGATAATGTTGAGCTTGT
GCTTTGTAAAAGCCTAAAAGCTTTAACAACAGTCTTTAATCACTACTTGG
CACCCTTAAGAAAGGCATCACCAAACATCACACTTGAAACCGTCATAGAG
CAATACATAGGTCTCGTCATTTACACCATGAAGCATTACAATCATTTGGT
TTACCCTCCGCTTAAAATGTGGCAGCTCCTCTACGCCTTAAAAACTGAAC
GTGGCTGGTCGGATATTTTCTTAATAGCCGAGCTTTGTTTCTGTGCACCA
TCGTCAAATGCATCACTTGAACGCTTCTTCAGTCAGATGCACATTGTCAA
AACTGACTGGAGGAATTGTTTGTCTGAGAAAAATCTGACCTCTCTGTTAA
GAATTAAAGTGACAGGACCAACATTGAAAGTGTTTATTGAGAAATATTGC
GAGAAGGCTGTTTTGAAATGGTTTAACGACAAAGAGCGAAGGATCAACCA
AAAACAGAGAAAACGGTACCGAAAAAGAAAGAgtaaaaaacaagaaagaa
agGA Coding sequence (CDS) from alignment at scaffold_208:90282..91585 >TCONS_00052009 ID=TCONS_00052009|Name=TCONS_00052009|organism=Clytia hemisphaerica|type=CDS|length=1302bp|location=Sequence derived from alignment at scaffold_208:90282..91585 (Clytia hemisphaerica)
aaaagcttGACGAATCTTTTTTACCTGTaccaaaaatcttcaaaaaagct
caGGGAATTACGAAAGCTTCATAATGTTCTTAAGGAAATGTATGAATTTT
CTGATAACTGTGTAAAGCCAACTAAAGCTACTGGTACCCGTTGGATTGCC
CACGTTCTGCGTAGTATGTCTGGGTTGATAGACAAGTTTGGACTTTACTT
GCAACATTTTGAGAATGTGATAGCAGATACTTCAAAGCAAACCGACAAAG
CAACATTGGAAGGGAAACGAAGGTTATTGACAGATGCCAATGTTTTACTT
CGCTGTGGCCTGTTTTTTGACCTGTTGGATCCTGCCTTGAAGTTCAGCCT
TATTTCTCAAAAGGAGAACTTCAACATTCTTGGAATGGTAGAAGCAATCG
ATGATATGTTTTTGACATATTCTTTGATGAAAAGGCGTTTTGAGAAACAT
CCTGAAAACGTCTCAAATCTCCCAACGTTTCAAAAGGTCCTTTCAACCAT
TAAGGAGGAAGTCAATGAAAATGGGGAAAGAGTCTTCAAGTACCAGGATA
TCAaacttcaatattttgaaagagAAAAGGAAAGTATTCAAAGGAACACT
ACCAAATACATCGATCTTATCCTTGATGCCATAACTGAAAGATTTGCTGC
ATTATCAGACGAACAAGATCAACAAGAGGATGTCAGTGGCACACCACTTG
CTGGCGACGCTATTCTTCGTGATATATGCCTTGTGATTGATTCTCAAAAG
CGGATTCCACCAGAGGACACATCACCTACCATTGATAATGTTGAGCTTGT
GCTTTGTAAAAGCCTAAAAGCTTTAACAACAGTCTTTAATCACTACTTGG
CACCCTTAAGAAAGGCATCACCAAACATCACACTTGAAACCGTCATAGAG
CAATACATAGGTCTCGTCATTTACACCATGAAGCATTACAATCATTTGGT
TTACCCTCCGCTTAAAATGTGGCAGCTCCTCTACGCCTTAAAAACTGAAC
GTGGCTGGTCGGATATTTTCTTAATAGCCGAGCTTTGTTTCTGTGCACCA
TCGTCAAATGCATCACTTGAACGCTTCTTCAGTCAGATGCACATTGTCAA
AACTGACTGGAGGAATTGTTTGTCTGAGAAAAATCTGACCTCTCTGTTAA
GAATTAAAGTGACAGGACCAACATTGAAAGTGTTTATTGAGAAATATTGC
GAGAAGGCTGTTTTGAAATGGTTTAACGACAAAGAGCGAAGGATCAACCA
AAAACAGAGAAAACGGTACCGAAAAAGAAAGAgtaaaaaacaagaaagaa
ag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052009-exon-scaffold_208-1491911889:90282..91585 | TCONS_00052009-exon-scaffold_208-1491911889:90282..91585 | Clytia hemisphaerica | exon |
| TCONS_00052009-exon-scaffold_208-1510915933:90282..91585 | TCONS_00052009-exon-scaffold_208-1510915933:90282..91585 | Clytia hemisphaerica | exon |
| TCONS_00052009-exon-scaffold_208-1575043694:90282..91585 | TCONS_00052009-exon-scaffold_208-1575043694:90282..91585 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_208 | supercontig | scaffold_208:90282..91585 . |
Blast
The following BLAST results are available for this feature:
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