TCONS_00052082 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052082
Unique NameTCONS_00052082
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2295

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052082 ID=TCONS_00052082|Name=TCONS_00052082|organism=Clytia hemisphaerica|type=transcript|length=2295bp
ACGTAATACAATCATGATTTTTAACGTATGCAAAATATCACATTATCACA
CTTAAGTTTTTGTCAAGAGTATTTTGTATATAGGCTGAGAGACCATCTTT
ACCTCGAACTACATGAAGATACGAATATTTTTCTCGGATAATCGTAGTAT
GGTGTAtggtatataaaaaaaatcgaaatcagTACCTGAGAAAACCTTCT
AAGATTACCCAACTGAGAAGAATTAAAAGAATCATGTTACGAATTGGGAA
ACTCAATCAATCTTTGCTCTTCATTTGCATTTTGTTCTTTGCACTCAATC
TTTGGTTCAAAATCACTtcattttatgactgtttccAGCTACTCTCCAAG
AGAACCGGAGACCAAAGAAATAATCACCATGTCAGAGATCCAATGAAGCA
GATATTAAATCTAGATTTGAAACAAAGAGTCGATCTTTCTATTGGTATTG
TGTGCCCACCGGATAATTGGTATATAGATGATGTTTATCGCTCTATTACT
TCAATTACGAACCAAGTCAGCCAGCAATCCGAAATCAACACTTACATTGT
CTTCATCGGTATCTTGGCAACGCAACCCGAAATTATTTCACAAGttcaag
aaaagtttgaaaagataTCACAAAATGTATTTAACAGCTCAAGAGAAGAC
TCACAACACGTTCAAATTACTTATATCTCCATATCAGAAGCGCAGTTATC
TCAACGTGTTGATAGCTTAGACACCCAAGCAGCACTTTTCAAGGCTTCCA
AAGGTCTCGTCAAGCGGCGGACCCACGTTAATCTTTTACTTTCATCCTTA
TTAGCATACGGTTCAAAAGCCGGAAAATACTTTCTAATGGCAGACTCAGA
ATATACTCTAAACCCAGGCTCTCTATCTGTCCTTATACAAGAATTTGAAC
AAAAAGGAGGGCGGCACAAACTAATGCgcttaaaagataaaaaagtaaGG
GCCGTCTCTTGCACCCTTTATTCATATGGACGGCCCTTAGAAGCAATAGC
GGAATATTTTTATTGGATGGCTCCCTTTACAGACGCTGTGAATCTTATGT
CGTATTTCGAACATTTACATCGGAGTCATTTGAAGCTGGATACGGATAAA
GCTTTGTTTTCACTACAACAATTATCGGTCCCAGGCCTCGTGGTACAAAA
TAATCCAATTGCTATGGTTACAACTGATATGGTAGTCGCTAATGAATTCT
TTCCCACGAACCCTTACGAACGTGGAGAACTATTCTGGACTTCAACTCCT
AATAAAGGCTGTTTCATTATTATCAAGTTTTTAAAATTACATCGAGTCAA
GTCGATTCGAATCGATACAGGAATAAATGTGTATTTAAGCGATACAATAA
CAAAAGCTGTTTTAGAGGAAGCAAATTCGTTTCAAAGTACAAACCAAGAT
TGTGGTGATTTTAATGAGATAGCGGATTTCAGGGCTGGTCAAGTGTTATT
GAATGACTTAGATGGACGCAATTTATGGACATCTTGTTTGAGAATTAGAA
TGTTAGCTGATGAAGGACACTGGGGTGGTATAAGACTGATACAAGTCACA
ATTTAGTTATTTTCCTTCTTTTAAATACAATCTTTTgtataggctgctgg
catccactaacggattcgtgctacTTATACAACCTGTGGTTTTGAGTTCT
GCGATTCATCTTTTATATGGCTTATCTTTATATGTGTtaagattacgtaa
tttttTCCTATTAGAAACCGATGTTTTCAGGTGTTACCAATAGAGACATT
ACTGTAATAGCAAATTTAGAACGTATGGTGACATGCTATGAATTATCTAT
AAGAGCTCATGTCGGGTGTTTTACGGTACATAAGCTGACATGCCGATCCG
ATCCAATGCATATCATTTATTTATGggagtaaaaaaaatttaaattaaat
ttgtttacttttttatatTATCGCTAGATAGTGAATtattcttaacccta
ttcatactaggcttttagggacggttcaaaactaggggggctgttcctgt
accaccccctaacttttgatctagtgggttttttggatgaaatttggtac
acaagACTAATGTcatataaggtaacttttgacaaaattattttttgatg
acgtcacttatcatgcccaaagtgagcaaagaCCGTAactttcctttgtt
cttttgaatagctattgtattctaataaaggctttagaaaaaagtctaAA
AGGTATGATACAAATTGGTAAAAAATCTGATTGGTTAGCTTGTATCATGT
GAATTATgttcatatttttcaaagtgcAAACTCCCGTACTTACAA
Run BLAST on NCBI

protein sequence of TCONS_00052082-protein

>TCONS_00052082-protein ID=TCONS_00052082-protein|Name=TCONS_00052082-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MVYKKNRNQYLRKPSKITQLRRIKRIMLRIGKLNQSLLFICILFFALNLW
FKITSFYDCFQLLSKRTGDQRNNHHVRDPMKQILNLDLKQRVDLSIGIVC
PPDNWYIDDVYRSITSITNQVSQQSEINTYIVFIGILATQPEIISQVQEK
FEKISQNVFNSSREDSQHVQITYISISEAQLSQRVDSLDTQAALFKASKG
LVKRRTHVNLLLSSLLAYGSKAGKYFLMADSEYTLNPGSLSVLIQEFEQK
GGRHKLMRLKDKKVRAVSCTLYSYGRPLEAIAEYFYWMAPFTDAVNLMSY
FEHLHRSHLKLDTDKALFSLQQLSVPGLVVQNNPIAMVTTDMVVANEFFP
TNPYERGELFWTSTPNKGCFIIIKFLKLHRVKSIRIDTGINVYLSDTITK
AVLEEANSFQSTNQDCGDFNEIADFRAGQVLLNDLDGRNLWTSCLRIRML
ADEGHWGGIRLIQVTI
Run BLAST on NCBI

transcript from alignment at scaffold_21:101778..105381-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052082 ID=TCONS_00052082|Name=TCONS_00052082|organism=Clytia hemisphaerica|type=transcript|length=3604bp|location=Sequence derived from alignment at scaffold_21:101778..105381- (Clytia hemisphaerica)
ACGTAATACAATCATGATTTTTAACGTATGCAAAATATCACATTATCACA
CTTAAGTTTTTGTCAAGAGTATTTTGTATATAGGCTGAGAGACCATCTTT
ACCTCGAACTACATGAAGATACGAATATTTTTCTCGGATAATCGTAGTAT
GGTGTATGGTATATAAAAAAAATCGAAATCAGTACCTGAGAAAACCTTCT
AAGATTACCCAACTGAGAAGAATTAAAAGAATCATGTTACGAATTGGGAA
ACTCAATCAATCTTTGCTCTTCATTTGCATTTTGTTCTTTGCACTCAATC
TTTGGTTCAAAATCAGTAAGTAAATATTTTGGTCAGATTAGTACACCCCC
TACTTCCAAACCCACTGGGAACCCTTCTCACTGGAAAAATTGGCCAAAAT
ATCGTTCCCGTTGGAAAAAATTATACTCTAATTTTTGTTGCCATTGAAAA
TAATCAGATAAGCAAATCCTCACTGCAAAAAACTGTGCTATTTTTTCCAT
CCCCACTGAATTTTATGGCTCAAAAACAATGGAATTCAATTCCCCAGCCT
TTAAAAACACCTGAAAATCGATCCCTATCGCGTTTTGCGGACCGTTATTT
TTACCCCCACTGGCTGAAAAAGTCCTACCGGGTCTGCGAGAAGGGGGTGT
TCTAGTTCATGAAGGGCCTGAATAAAGTGTCGATTGAGATCAGTTTATAT
GAAATAGTCACTATGGAATCCCACTATTTTGTATTTAATTTCCCTGGTTC
AACCACTCTTAAGGATATAGTCGAATTTTTATGGAATCTGAATATCCTAT
CCCCTAGATAGAAAAGTTGCACGTCTTGCGTCGTTTTCAGAAAAAAACGC
TTGGATTGAGATTAAAATGTGTACCAGACCAGACAGATGTCTAAAATGTA
CCATTCAAACAAAAGAAAACAGAAGACTCGTTACGTTGTCAAAAAACGGT
GACAATTTGAAGGCTCCACTTTTCACTTTTTCTTCCCTTGCAAAATTTTA
AAGATTCGATTCTATACCTTCGGGCTGTTATACGTTATTCGTTTTACGGG
AATTTCTAATAGAGGTTGTTGATTCTTCCGTTAAATCCATTGTTTTGTTC
TAGTTTAGACTGCCGACTTTCTGCCCTGCCTATTCAAATTGTAAGAGTAG
GCCAAAAGTGGGCAAAAAGTTGGCAGTTAAATTCTTTGCTTGGAAAAGAT
TGAAAGAACTCATTGCATTGACGTCAAAAGAGAGCAATGCATTGACTTTA
GACAGCTAACCTTATGTCCACTTTAATTCACAATTAGAATAGACAGGGCG
AAAAGTAAGCTGTCTAAACTAGAGCTTAATACTTTGTGTTACTTTTCTTT
TCCTTCCGCAGCTTCATTTTATGACTGTTTCCAGCTACTCTCCAAGAGAA
CCGGAGACCAAAGAAATAATCACCATGTCAGAGATCCAATGAAGCAGATA
TTAAATCTAGATTTGAAACAAAGAGGTAAAGTTACCCAAGAATTTTTTGA
TACAATTCTTTATATACACCTTATGGCGTAGATTTCGGTCGTAGGAAAAA
TCTATGCCTAGTTACTTTTACTCGACCAATTTACTGATGAATATTTGAAA
CTATATTCATCTCAAGAAATTAAACATTTTGGAAAGCCCAAGATTTTTGT
TTCGCAATTCCTTTTTGCATGCATAATAATGGAGGGAGAAGTCGTGTACT
TTGATAGAATTTTGCTATTATTTCTCTACATATTTTAGTCGATCTTTCTA
TTGGTATTGTGTGCCCACCGGATAATTGGTATATAGATGATGTTTATCGC
TCTATTACTTCAATTACGAACCAAGTCAGCCAGCAATCCGAAATCAACAC
TTACATTGTCTTCATCGGTATCTTGGCAACGCAACCCGAAATTATTTCAC
AAGTTCAAGAAAAGTTTGAAAAGATATCACAAAATGTATTTAACAGCTCA
AGAGAAGACTCACAACACGTTCAAATTACTTATATCTCCATATCAGAAGC
GCAGTTATCTCAACGTGTTGATAGCTTAGACACCCAAGCAGCACTTTTCA
AGGCTTCCAAAGGTCTCGTCAAGCGGCGGACCCACGTTAATCTTTTACTT
TCATCCTTATTAGCATACGGTTCAAAAGCCGGAAAATACTTTCTAATGGC
AGACTCAGAATATACTCTAAACCCAGGCTCTCTATCTGTCCTTATACAAG
AATTTGAACAAAAAGGAGGGCGGCACAAACTAATGCGCTTAAAAGATAAA
AAAGTAAGGGCCGTCTCTTGCACCCTTTATTCATATGGACGGCCCTTAGA
AGCAATAGCGGAATATTTTTATTGGATGGCTCCCTTTACAGACGCTGTGA
ATCTTATGTCGTATTTCGAACATTTACATCGGAGTCATTTGAAGCTGGAT
ACGGATAAAGCTTTGTTTTCACTACAACAATTATCGGTCCCAGGCCTCGT
GGTACAAAATAATCCAATTGCTATGGTTACAACTGATATGGTAGTCGCTA
ATGAATTCTTTCCCACGAACCCTTACGAACGTGGAGAACTATTCTGGACT
TCAACTCCTAATAAAGGCTGTTTCATTATTATCAAGTTTTTAAAATTACA
TCGAGTCAAGTCGATTCGAATCGATACAGGAATAAATGTGTATTTAAGCG
ATACAATAACAAAAGCTGTTTTAGAGGAAGCAAATTCGTTTCAAAGTACA
AACCAAGATTGTGGTGATTTTAATGAGATAGCGGATTTCAGGGCTGGTCA
AGTGTTATTGAATGACTTAGATGGACGCAATTTATGGACATCTTGTTTGA
GAATTAGAATGTTAGCTGATGAAGGACACTGGGGTGGTATAAGACTGATA
CAAGTCACAATTTAGTTATTTTCCTTCTTTTAAATACAATCTTTTGTATA
GGCTGCTGGCATCCACTAACGGATTCGTGCTACTTATACAACCTGTGGTT
TTGAGTTCTGCGATTCATCTTTTATATGGCTTATCTTTATATGTGTTAAG
ATTACGTAATTTTTTCCTATTAGAAACCGATGTTTTCAGGTGTTACCAAT
AGAGACATTACTGTAATAGCAAATTTAGAACGTATGGTGACATGCTATGA
ATTATCTATAAGAGCTCATGTCGGGTGTTTTACGGTACATAAGCTGACAT
GCCGATCCGATCCAATGCATATCATTTATTTATGGGAGTAAAAAAAATTT
AAATTAAATTTGTTTACTTTTTTATATTATCGCTAGATAGTGAATTATTC
TTAACCCTATTCATACTAGGCTTTTAGGGACGGTTCAAAACTAGGGGGGC
TGTTCCTGTACCACCCCCTAACTTTTGATCTAGTGGGTTTTTTGGATGAA
ATTTGGTACACAAGACTAATGTCATATAAGGTAACTTTTGACAAAATTAT
TTTTTGATGACGTCACTTATCATGCCCAAAGTGAGCAAAGACCGTAACTT
TCCTTTGTTCTTTTGAATAGCTATTGTATTCTAATAAAGGCTTTAGAAAA
AAGTCTAAAAGGTATGATACAAATTGGTAAAAAATCTGATTGGTTAGCTT
GTATCATGTGAATTATGTTCATATTTTTCAAAGTGCAAACTCCCGTACTT
ACAA

Coding sequence (CDS) from alignment at scaffold_21:101778..105381-

>TCONS_00052082 ID=TCONS_00052082|Name=TCONS_00052082|organism=Clytia hemisphaerica|type=CDS|length=4203bp|location=Sequence derived from alignment at scaffold_21:101778..105381- (Clytia hemisphaerica)
TCGATCTTTCTATTGGTATTGTGTGCCCACCGGATAATTGGTATATAGAT
GATGTTTATCGCTCTATTACTTCAATTACGAACCAAGTCAGCCAGCAATC
CGAAATCAACACTTACATTGTCTTCATCGGTATCTTGGCAACGCAACCCG
AAATTATTTCACAAGTTCAAGAAAAGTTTGAAAAGATATCACAAAATGTA
TTTAACAGCTCAAGAGAAGACTCACAACACGTTCAAATTACTTATATCTC
CATATCAGAAGCGCAGTTATCTCAACGTGTTGATAGCTTAGACACCCAAG
CAGCACTTTTCAAGGCTTCCAAAGGTCTCGTCAAGCGGCGGACCCACGTT
AATCTTTTACTTTCATCCTTATTAGCATACGGTTCAAAAGCCGGAAAATA
CTTTCTAATGGCAGACTCAGAATATACTCTAAACCCAGGCTCTCTATCTG
TCCTTATACAAGAATTTGAACAAAAAGGAGGGCGGCACAAACTAATGCGC
TTAAAAGATAAAAAAGTAAGGGCCGTCTCTTGCACCCTTTATTCATATGG
ACGGCCCTTAGAAGCAATAGCGGAATATTTTTATTGGATGGCTCCCTTTA
CAGACGCTGTGAATCTTATGTCGTATTTCGAACATTTACATCGGAGTCAT
TTGAAGCTGGATACGGATAAAGCTTTGTTTTCACTACAACAATTATCGGT
CCCAGGCCTCGTGGTACAAAATAATCCAATTGCTATGGTTACAACTGATA
TGGTAGTCGCTAATGAATTCTTTCCCACGAACCCTTACGAACGTGGAGAA
CTATTCTGGACTTCAACTCCTAATAAAGGCTGTTTCATTATTATCAAGTT
TTTAAAATTACATCGAGTCAAGTCGATTCGAATCGATACAGGAATAAATG
TGTATTTAAGCGATACAATAACAAAAGCTGTTTTAGAGGAAGCAAATTCG
TTTCAAAGTACAAACCAAGATTGTGGTGATTTTAATGAGATAGCGGATTT
CAGGGCTGGTCAAGTGTTATTGAATGACTTAGATGGACGCAATTTATGGA
CATCTTGTTTGAGAATTAGAATGTTAGCTGATGAAGGACACTGGGGTGGT
ATAAGACTGATACAAGTCACAATTTAGCTTCATTTTATGACTGTTTCCAG
CTACTCTCCAAGAGAACCGGAGACCAAAGAAATAATCACCATGTCAGAGA
TCCAATGAAGCAGATATTAAATCTAGATTTGAAACAAAGAGATGGTATAT
AAAAAAAATCGAAATCAGTACCTGAGAAAACCTTCTAAGATTACCCAACT
GAGAAGAATTAAAAGAATCATGTTACGAATTGGGAAACTCAATCAATCTT
TGCTCTTCATTTGCATTTTGTTCTTTGCACTCAATCTTTGGTTCAAAATC
ATCGATCTTTCTATTGGTATTGTGTGCCCACCGGATAATTGGTATATAGA
TGATGTTTATCGCTCTATTACTTCAATTACGAACCAAGTCAGCCAGCAAT
CCGAAATCAACACTTACATTGTCTTCATCGGTATCTTGGCAACGCAACCC
GAAATTATTTCACAAGTTCAAGAAAAGTTTGAAAAGATATCACAAAATGT
ATTTAACAGCTCAAGAGAAGACTCACAACACGTTCAAATTACTTATATCT
CCATATCAGAAGCGCAGTTATCTCAACGTGTTGATAGCTTAGACACCCAA
GCAGCACTTTTCAAGGCTTCCAAAGGTCTCGTCAAGCGGCGGACCCACGT
TAATCTTTTACTTTCATCCTTATTAGCATACGGTTCAAAAGCCGGAAAAT
ACTTTCTAATGGCAGACTCAGAATATACTCTAAACCCAGGCTCTCTATCT
GTCCTTATACAAGAATTTGAACAAAAAGGAGGGCGGCACAAACTAATGCG
CTTAAAAGATAAAAAAGTAAGGGCCGTCTCTTGCACCCTTTATTCATATG
GACGGCCCTTAGAAGCAATAGCGGAATATTTTTATTGGATGGCTCCCTTT
ACAGACGCTGTGAATCTTATGTCGTATTTCGAACATTTACATCGGAGTCA
TTTGAAGCTGGATACGGATAAAGCTTTGTTTTCACTACAACAATTATCGG
TCCCAGGCCTCGTGGTACAAAATAATCCAATTGCTATGGTTACAACTGAT
ATGGTAGTCGCTAATGAATTCTTTCCCACGAACCCTTACGAACGTGGAGA
ACTATTCTGGACTTCAACTCCTAATAAAGGCTGTTTCATTATTATCAAGT
TTTTAAAATTACATCGAGTCAAGTCGATTCGAATCGATACAGGAATAAAT
GTGTATTTAAGCGATACAATAACAAAAGCTGTTTTAGAGGAAGCAAATTC
GTTTCAAAGTACAAACCAAGATTGTGGTGATTTTAATGAGATAGCGGATT
TCAGGGCTGGTCAAGTGTTATTGAATGACTTAGATGGACGCAATTTATGG
ACATCTTGTTTGAGAATTAGAATGTTAGCTGATGAAGGACACTGGGGTGG
TATAAGACTGATACAAGTCACAATTTAGCTTCATTTTATGACTGTTTCCA
GCTACTCTCCAAGAGAACCGGAGACCAAAGAAATAATCACCATGTCAGAG
ATCCAATGAAGCAGATATTAAATCTAGATTTGAAACAAAGAGATGGTATA
TAAAAAAAATCGAAATCAGTACCTGAGAAAACCTTCTAAGATTACCCAAC
TGAGAAGAATTAAAAGAATCATGTTACGAATTGGGAAACTCAATCAATCT
TTGCTCTTCATTTGCATTTTGTTCTTTGCACTCAATCTTTGGTTCAAAAT
CATCGATCTTTCTATTGGTATTGTGTGCCCACCGGATAATTGGTATATAG
ATGATGTTTATCGCTCTATTACTTCAATTACGAACCAAGTCAGCCAGCAA
TCCGAAATCAACACTTACATTGTCTTCATCGGTATCTTGGCAACGCAACC
CGAAATTATTTCACAAGTTCAAGAAAAGTTTGAAAAGATATCACAAAATG
TATTTAACAGCTCAAGAGAAGACTCACAACACGTTCAAATTACTTATATC
TCCATATCAGAAGCGCAGTTATCTCAACGTGTTGATAGCTTAGACACCCA
AGCAGCACTTTTCAAGGCTTCCAAAGGTCTCGTCAAGCGGCGGACCCACG
TTAATCTTTTACTTTCATCCTTATTAGCATACGGTTCAAAAGCCGGAAAA
TACTTTCTAATGGCAGACTCAGAATATACTCTAAACCCAGGCTCTCTATC
TGTCCTTATACAAGAATTTGAACAAAAAGGAGGGCGGCACAAACTAATGC
GCTTAAAAGATAAAAAAGTAAGGGCCGTCTCTTGCACCCTTTATTCATAT
GGACGGCCCTTAGAAGCAATAGCGGAATATTTTTATTGGATGGCTCCCTT
TACAGACGCTGTGAATCTTATGTCGTATTTCGAACATTTACATCGGAGTC
ATTTGAAGCTGGATACGGATAAAGCTTTGTTTTCACTACAACAATTATCG
GTCCCAGGCCTCGTGGTACAAAATAATCCAATTGCTATGGTTACAACTGA
TATGGTAGTCGCTAATGAATTCTTTCCCACGAACCCTTACGAACGTGGAG
AACTATTCTGGACTTCAACTCCTAATAAAGGCTGTTTCATTATTATCAAG
TTTTTAAAATTACATCGAGTCAAGTCGATTCGAATCGATACAGGAATAAA
TGTGTATTTAAGCGATACAATAACAAAAGCTGTTTTAGAGGAAGCAAATT
CGTTTCAAAGTACAAACCAAGATTGTGGTGATTTTAATGAGATAGCGGAT
TTCAGGGCTGGTCAAGTGTTATTGAATGACTTAGATGGACGCAATTTATG
GACATCTTGTTTGAGAATTAGAATGTTAGCTGATGAAGGACACTGGGGTG
GTATAAGACTGATACAAGTCACAATTTAGCTTCATTTTATGACTGTTTCC
AGCTACTCTCCAAGAGAACCGGAGACCAAAGAAATAATCACCATGTCAGA
GATCCAATGAAGCAGATATTAAATCTAGATTTGAAACAAAGAGATGGTAT
ATAAAAAAAATCGAAATCAGTACCTGAGAAAACCTTCTAAGATTACCCAA
CTGAGAAGAATTAAAAGAATCATGTTACGAATTGGGAAACTCAATCAATC
TTTGCTCTTCATTTGCATTTTGTTCTTTGCACTCAATCTTTGGTTCAAAA
TCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032987XLOC_032987Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052082-proteinTCONS_00052082-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052082-exon-scaffold_21-1575043694:105067..105381TCONS_00052082-exon-scaffold_21-1575043694:105067..105381Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1575043694:103907..104020TCONS_00052082-exon-scaffold_21-1575043694:103907..104020Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1575043694:101778..103643TCONS_00052082-exon-scaffold_21-1575043694:101778..103643Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1510915933:105067..105381TCONS_00052082-exon-scaffold_21-1510915933:105067..105381Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1510915933:103907..104020TCONS_00052082-exon-scaffold_21-1510915933:103907..104020Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1510915933:101778..103643TCONS_00052082-exon-scaffold_21-1510915933:101778..103643Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1491911889:105067..105381TCONS_00052082-exon-scaffold_21-1491911889:105067..105381Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1491911889:103907..104020TCONS_00052082-exon-scaffold_21-1491911889:103907..104020Clytia hemisphaericaexon
TCONS_00052082-exon-scaffold_21-1491911889:101778..103643TCONS_00052082-exon-scaffold_21-1491911889:101778..103643Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:101778..105381 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0340151	0.0663401	0.0770273	0.0565194	3.30273	3.47982	28.9504	33.1828	12.8127	13.1763	11.1337	6.00411	0.610929	0.423331	0.0773524	0.0622591	1.11077	0.864009	0.922668	1.07948	0.608423	0.86624	0.175539	0.106406	0.529547	0.537796	0.0466688	0.0250146	0.0566312	0.0384982
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052082 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top