TCONS_00052113 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052113
Unique NameTCONS_00052113
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1895

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052113 ID=TCONS_00052113|Name=TCONS_00052113|organism=Clytia hemisphaerica|type=transcript|length=1895bp
GAAGGTTtcatacttctagactatacaCATAAGATGAGCACCAAAATTGT
AACTAGAAAATTGGAGAAAGAAAATGCAACTTTGCACTCTATAGCATGCA
ATATATGCCATAATGGCGGAGCAGAAGTTGACAAATACTTTAAAACATGT
ACCAGAGTGGTGGATAATGAAACAGGTATTTTTAAAGCCTCTTTTCGTGG
AAGATGTTTAATGGGGAAGAATGTTCAATTACCTGATGGTTATAAAGgtG
TTGTGTTGAAAGAAACGGCTTCCGTCTATTCTGATCAGCAGGATCGAACT
CTTGAAATCACAGaacattttgaccaaatgaCGTATTGGAATTTGGAAAC
GAAACCAACACAAAACGACCAATTTGTCACTTCTATGGACTGGTTGTCGG
CCGCACAAgttctACATGCTCCAGTTGATgattttgaagaagaagaagaa
gtgaataaagaaaatgattatCAGCCCAAATGTACACCCCCTGAACGATG
ATCCTGAATCTACATCGAGTCGACAATGAACGTGAAAGTTTGCACAACTC
TTGCGATTGATTATTTTGTCGGCTATACACTGGTGTGAAACTTACCAGAA
TATATCAATCATCGAGCGAACATAGATTGGACAATTCCTTTTGCATGCGC
CAGTCACCGACAGCTGGTATAAACGTTTGAAAACCATACAACCAACCATT
TTATCCTTTGCTGGGCTATATTTATCGGATTTGTTGGAAAGTTTTCGGAT
TGAAATTGGTTATGAAAATCAACTCATTTAGATTGAAGAACTTTTTTTAC
ATTCGAACCTTTGGGAAGGTTTTGtcctgttttttttataagacaaAGAA
TTGTATCAATGAAAAgataaatacacgtttttttataagaataagtttat
aagaacacgaggctgaaaattgaccaaaacctaagaactAAGCCCTTCTG
TAAAAAGGGAAATGTttaagccaatccaagaagtatttgtccctctaagt
tattttttcatgtgaaaattctcaattttacgtcttgattcgcgagtaaa
tgtaaatgtcgtgaatttcacgatttttcgtcctcgcgtaAATTTCTGCT
CACTAAAGTTTGTACGCTTAAAGTatttaagaacatcataagaacattgA
GCCTGAAgattcgaaaaattaagaacagcccagcctgagccaaaatttac
tggttcttataaaaaaagtgtgtatttgAGGCTGTGCTCGGAATAAAAGA
ACGAAATAGATTCTctaaaaaagtgtaatgctTTTTTCGAACGAAAATTC
TCATATTTTAAAGGAAGGAACTTTctcggaagaaattttcgtgaGTTCGT
GATTTTTCGGCCAAATCGCGAATATTAAGTCCCGCAAAAAAGGCCAAACG
TCGCCATCCGTGAAAGTTAATTCCCAAGAAATATATAGTGGAATGGGCCA
TTCGCGAATGTGAATTCCGAAATTTGTGATATTTTtgcctcgcgaaagtt
tctttctttagaaaaagtaggCTTGAttaataaatcaaaataaaagttat
caataattcagaaattttatgtCCTGGGTAAAATCTATAACAATCAATAC
ACAGGTTGCGAAATTTAAAGTCTGAAGACTAATCACGCTTTCACCCGAAA
TTTTGATGTTGCTtgttatttctgattggttcgaatttattgacactaat
taATAAGGTAATTAACTGTTGTAATTAAAAGCAAgcaacatgggaataaa
atcacgtgaattttttcgagtaatcacatgtttttaCTGCACATATAACT
TTGCAACCCGTGTTTTCTGCTTTTTTTCGATCGCAATGTACGGGCCTGGA
GTCGAGGCAAATACCAAGGAACACTTTTATTTATTCGAAAGATTT
Run BLAST on NCBI

protein sequence of TCONS_00052113-protein

>TCONS_00052113-protein ID=TCONS_00052113-protein|Name=TCONS_00052113-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp
EGFILLDYTHKMSTKIVTRKLEKENATLHSIACNICHNGGAEVDKYFKTC
TRVVDNETGIFKASFRGRCLMGKNVQLPDGYKGVVLKETASVYSDQQDRT
LEITEHFDQMTYWNLETKPTQNDQFVTSMDWLSAAQVLHAPVDDFEEEEE
VNKENDYQPKCTPPER
Run BLAST on NCBI

transcript from alignment at scaffold_210:115840..122437+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052113 ID=TCONS_00052113|Name=TCONS_00052113|organism=Clytia hemisphaerica|type=transcript|length=6598bp|location=Sequence derived from alignment at scaffold_210:115840..122437+ (Clytia hemisphaerica)
GAAGGTTtcatacttctagactatacaCATAAGATGAGCACCAAAATTGT AACTAGAAAATTGGAGAAAGAAAATGCAACTTTGCACTCTATAGCATGCA ATATATGCCATAATGGCGGAGCAGAAGTTGACAAATACTTTAAAACATGT ACCAGAGTGGTGGATAATGAAACAGGTATATTTTTCATCTTATTTTATTC TTAGGTTTTGCTGTTATATTAGGAAGTTAGTTACCTTAAAGGGTATAAAT TAATGCGAGAATAAATTAATGTGAGCAATCCCCCAAAACAATTTATGTTT TGCGGAATGAATTAACGCGAATAGCCCCATTTAGGGATTTTGTGGAATTG GGTCCAGAAAATGAATATTTAGGGTTTACACCTCCAAAATCGGCaatatt ttagagaaaaaaaatgcgAACCTTATAAATGCGAACGACCGAAATTTTGC GGAATCTAATTTTGCGAAAAGGGGCCAAATTCGCATTAACCAGTTCCGCA CGAATTAACTCCGCATTAACTAAttccgcattaatttattctctcgtgaa tttattcccttaaggtatgttTTATTATCAGGATGTCTTCATAGCTCGAA CATGCACGGGGAACACAGATTTGTTCCAGTTAATGAAAGTTCGAGTTATT GAATAGGGTTTAAAtttattgttaactgaagggacgagaaaacttgtttg agttaaggagacgttcgagttaaagagactctactttGTTAAAAAATGAT GCATATTGCAAAGTGACCTCAATAAGTAGTTTTTTGAATGAACTCAAAGG AATTTTCGTAGCACTTTTCCCTACAACTGTTTTCCTCacaatttgaatta aaattgagtTTTAACCACCGTATAAGTGGTAAAAATACttggaaaaaaat aatgaataagtCCCTTGAAATAAGTCATGGTTAAAAGCTCATCATGGTTT CAAAACTCAGCAATTTTCTTGATGCACAGTGTTAGTGTAAGTAAATAtgc ttattggaactaattttcgcgggaattaattttaacgtttttcatggttt ttttggcaaaaccgcaaaatgcaatttttcttttcgaACGCGAatttaag ttcccgcgaaaatgagttccaataaggtatgctTGTCTGGGAAAtataaa taaatccaaaaagtaacatttttacagttattttaaagttatttcaattt aaattttttgcagGTATTTTTAAAGCCTCTTTTCGTGGAAGATGTTTAAT GGGGAAGAATGTTCAATTACCTGATGGTTATAAAGGTTTGTGGTTATTCT CTTTGGCGATTGCAActgttgttttgaaattatggGCTTTAAGGGTGGCa attctaaataaaaaattataaatttttagcataatttttaaacctcgctt tctttatttttatttaatctttattttgaatgcccgtttacttttttttt agtcTAAACAGGTCTCAATCTCAGCATTCtaccctttttttataagaatt gaaGAAGTAGAAGCGAGACTCGTGATTCTTAAAGGGTCTCAAACGTGCGA AAAAGTGGTAAGAGAGAAAACTTAATAAAAAGCCGAAACTACTTTCTATA AGCTTAGCATTGTGTCTCTAAGCGACGCTCGGTTTAAAATCTTTGaagtt ttaagaaaaacattcTCACTGAGAAAAAGATCATTATTGATCATTGTTAT CAAATACCTCCGTGTGACAGACCTGCTGGGACCCCGCCCCGCtgaaaaat ttggtcaaaatgttcgtccccggtggaaaaaatacctATTATCAACCACA CTGGGATATTGACTTTGgttttttacctatttgaaattcaatagaaGAAA GtttcactccaaaaccatttCCACTGGATGTTTTGAGCTAGGAACagtag aatttttatccccattagGATTGGGATCTAGAAATTTTCCACTGgtgctg tgagacaggggtgttattaaGGTTTTAACTTTATctgtattttttttgct tactgGTGCTTTTATCCCTCAACTTatgatttcatttttcaggtGTTGTG TTGAAAGAAACGGCTTCCGTCTATTCTGATCAGCAGGTGAcacatgcttt tttataagaatagcaatgataaaaaaaaatggcTTGCTGAACAAATTTTC TCTGACCACGTATTTTTTTACCGAAGATTACTTTTTATCGACAATTAAGT TTAActgagaatttattttgaacTTACGAATCATTTTTTTTACTGACAAA TTTTTCACTGATAAGGTATTTTGtgaattaaatgaaaattttccagagaT TGGTTATTGTTGGATTAGCTATGAAGCTCTTTGTCTTTTTCCTGCCTATC TTATGCCAAAGTCAGATCTTTTTTCATTCTACATTTATTTTTTAGGATCG AACTCTTGAAATCACAGaacattttgaccaaatgaCGTATTGGAATTTGG AAACGAAACCAACACAAAACGACCAATTTGTCACTTCTATGGACTGGTTG TCGGCCGCACAAgttgtatgtttttaaaaaggcTTCTCTAATTAATTTAT TGCTATATCTAACATGAATTTCATTGGGTGGGTTTACATCTGTAGGGGAG AATCGATTAACACTCCCTTTGTCGATAACAATTCACAACATAAACGaaac aaaagctcaaaatcaaatcaaatcaaaagaaatcgtgGTATTTCTATTGT ATTTCTTAATCGATTCTCTCCTAGATGTAAACCCACCCATTGGAGATTCT GCATTGTTCCATGTGGAGCTTTTAATATTTTATACCTGTTGTTGTGAGAT GATATTAATGCGCCACTCACTTAGTCTAACCTACGGCATGAGCCGCCCTG AGGGTAGGTTTTTCGTGACCCTCGAAATGCACTTTatgggtgtacttttg atagcgTACACTACAATGATCCTCTTTTAGCTGGGTACAGTTTTGACTCA CATCCGTTATAATTTGTTTTGCACATCATTTTATATCATTGAAAAGCTCT CGAGAATGATATAAAGGACTTTTAGGTAGCCTATACAAGACGTCTATTCA TTCCACTTTATTGGAGCCCAGCTTTTCgagctccaaacattcgatttttt gacgtcactttaaactttcgtAGCTCTAGCAGTAGGGAAAAAACGAATAT GCGTCAGAACAGAGGGGGGGATACCAAGTCAGTGTACTGACCCATAAGTT ACTAACTTTATTTTAGgatttatttccaaaaaaaatagaccaccaccctt tttagtacactgtactatttcattgtatttttctcagaggaccacccttt tagacactgtactaactttgtcaatgtatttttctcagaggaccaccctt ttagacactgtactaactttgtcaatgtatttttctcagaggaccaccct tttagtacactgtactaactttgtcaatgtatttttctcagaggaccacc cttttagacactgtactaactttgtcaatgtatttttctcagaggaccac ccttttagtacactgtactaactttgtcaatgtatttttctcagaggacc acccttttagacactgtactaactttgtcaatgtatttttctcagaggac cacccttttagtacactgtactaactttgtcaatgtatttttctcagagg accatcctttcagtacactgtactaactcaatttaatctaaaaaatacac caccccactgaacacttgaaaggcttcgtTTTTCATAAAATCATGAAAGT GGAGCCCATCAAGAAACGAAATGAAATATCCCGGTTTttaaggcgtacaa actttcgcgagcagaaactttcgcgattttctggaattttggcccttttt aacAGGGCAATTTGCGAAACTTTATGCTCGCCAATGTTTATACGCCTAAA ATACTCGCTAATTTTTAAGCGGATATGGTCGATTTCGATTCAAAATTGTT TGTTCTTCCTCTTTGCCTGTatgaaagattttcattttgttatgtgacat ttgttttgacatGTGTATCTCGCTGCATACagttgtttacaaattttgtc agtacttttatgtccctttaaaaaaatcatcaattttatgatttttagct ACATGCTCCAGTTGATgattttgaagaagaagaagaagtgaataaagaaa atgattatCAGCCCAAATGTACACCCCCTGAACGATGATCCTGAATCTAG TAAGTAGGGTAATttatagactagagtctacttctgactgaactttgctt tttgatatttttatgacgCTTTTCTTATAacgagtccagtgaagtagact aggagcatttgacgaggtcgccattttgaaaaaaaaatgttaaaaaaatc caaagaaCAAAAAAGCTCTCACAGTTAAAAGATATAGTTAAGAATAAGAA AcgaacatcaataacagattttcaTCTGTTTTTACCTTCCGAAAACAAAT AAAACCTGCCTAAGCAAAAggatattaccatatactaccggtcCACTTAA TCGCGTCAttcagtctataaaaaaagctttaattgTTCCCGGGGCTAGGT AATTTACTAAATGTTTATTATGCATTCTCAGCAAAAAAGGCGCGCTTCTT ctctatttcataaaaaacattttcaaagctAATCTATACATACAGTGTGT CTCAAAAAGAGCGGAGAAATTTTCATACAAagtaaaatcctaaaaactca TCATTATAAACTGGGCTTAGAATTattaaaataagataaaataaaatctc tGTTCAATTAACAGATATTCAATTCGAAAGACAATTGACTaggttttaaa gatttaaatatTAATTATACAAGcaatgaaattttgcataaattatacGG ATTTTACTTTACATAAACACTTGTCCGTTTTTTGGAACGCACTGTATATA TGAAGCTGATTTAATGAGGGCTACGCCGTATCTtttgtttcgagcgtaaa actcctaaaAGGCCTAAAAGCcaggagctgtctattgtgcaGACTAAGCT GATTGCTTATGTTGCAAAAGCAATAGAAAATATTGACTTGATACAATAAA AATATAGACCATTCATTTATcttattcaacattttcaaccTCAAAGCGTT TTGTTTTAATGCAATGATTTAGCAAGTTCAGCATCTTTTTTATAGCGATT CAGAAGTAAATGTAAATATCGTTAACCTGGTTTTAagtttctttttctat tttcgtTGGTTTTAGCATCGAGTCGACAATGAACGTGAAAGTTTGCACAA CTCTTGCGATTGATTATTTTGTCGGCTATACACTGGTGTGAAACTTACCA GAATATATCAATCATCGAGCGAACATAGATTGGACAATTCCTTTTGCATG CGCCAGTCACCGACAGCTGGTATAAACGTTTGAAAACCATACAACCAACC ATTTTATCCTTTGCTGGGCTATATTTATCGGATTTGTTGGAAAGTTTTCG GATTGAAATTGGTTATGAAAATCAACTCATTTAGATTGAAGAACTTTTTT TACATTCGAACCTTTGGGAAGGTTTTGtcctgttttttttataagacaaA GAATTGTATCAATGAAAAgataaatacacgtttttttataagaataagtt tataagaacacgaggctgaaaattgaccaaaacctaagaactAAGCCCTT CTGTAAAAAGGGAAATGTttaagccaatccaagaagtatttgtccctcta agttattttttcatgtgaaaattctcaattttacgtcttgattcgcgagt aaatgtaaatgtcgtgaatttcacgatttttcgtcctcgcgtaAATTTCT GCTCACTAAAGTTTGTACGCTTAAAGTatttaagaacatcataagaacat tgAGCCTGAAgattcgaaaaattaagaacagcccagcctgagccaaaatt tactggttcttataaaaaaagtgtgtatttgAGGCTGTGCTCGGAATAAA AGAACGAAATAGATTCTctaaaaaagtgtaatgctTTTTTCGAACGAAAA TTCTCATATTTTAAAGGAAGGAACTTTctcggaagaaattttcgtgaGTT CGTGATTTTTCGGCCAAATCGCGAATATTAAGTCCCGCAAAAAAGGCCAA ACGTCGCCATCCGTGAAAGTTAATTCCCAAGAAATATATAGTGGAATGGG CCATTCGCGAATGTGAATTCCGAAATTTGTGATATTTTtgcctcgcgaaa gtttctttctttagaaaaagtaggCTTGAttaataaatcaaaataaaagt tatcaataattcagaaattttatgtCCTGGGTAAAATCTATAACAATCAA TACACAGGTTGCGAAATTTAAAGTCTGAAGACTAATCACGCTTTCACCCG AAATTTTGATGTTGCTtgttatttctgattggttcgaatttattgacact aattaATAAGGTAATTAACTGTTGTAATTAAAAGCAAgcaacatgggaat aaaatcacgtgaattttttcgagtaatcacatgtttttaCTGCACATATA ACTTTGCAACCCGTGTTTTCTGCTTTTTTTCGATCGCAATGTACGGGCCT GGAGTCGAGGCAAATACCAAGGAACACTTTTATTTATTCGAAAGATTT

Coding sequence (CDS) from alignment at scaffold_210:115840..122437+

>TCONS_00052113 ID=TCONS_00052113|Name=TCONS_00052113|organism=Clytia hemisphaerica|type=CDS|length=2505bp|location=Sequence derived from alignment at scaffold_210:115840..122437+ (Clytia hemisphaerica)
GAAGGTTtcatacttctagactatacaCATAAGATGAGCACCAAAATTGT
AACTAGAAAATTGGAGAAAGAAAATGCAACTTTGCACTCTATAGCATGCA
ATATATGCCATAATGGCGGAGCAGAAGTTGACAAATACTTTAAAACATGT
ACCAGAGTGGTGGATAATGAAACAGGTATTTTTAAAGCCTCTTTTCGTGG
AAGATGTTTAATGGGGAAGAATGTTCAATTACCTGATGGTTATAAAGgtG
TTGTGTTGAAAGAAACGGCTTCCGTCTATTCTGATCAGCAGGATCGAACT
CTTGAAATCACAGaacattttgaccaaatgaCGTATTGGAATTTGGAAAC
GAAACCAACACAAAACGACCAATTTGTCACTTCTATGGACTGGTTGTCGG
CCGCACAAgttctACATGCTCCAGTTGATgattttgaagaagaagaagaa
gtgaataaagaaaatgattatCAGCCCAAATGTACACCCCCTGAACGATG
AGAAGGTTtcatacttctagactatacaCATAAGATGAGCACCAAAATTG
TAACTAGAAAATTGGAGAAAGAAAATGCAACTTTGCACTCTATAGCATGC
AATATATGCCATAATGGCGGAGCAGAAGTTGACAAATACTTTAAAACATG
TACCAGAGTGGTGGATAATGAAACAGGTATTTTTAAAGCCTCTTTTCGTG
GAAGATGTTTAATGGGGAAGAATGTTCAATTACCTGATGGTTATAAAGgt
GTTGTGTTGAAAGAAACGGCTTCCGTCTATTCTGATCAGCAGGATCGAAC
TCTTGAAATCACAGaacattttgaccaaatgaCGTATTGGAATTTGGAAA
CGAAACCAACACAAAACGACCAATTTGTCACTTCTATGGACTGGTTGTCG
GCCGCACAAgttctACATGCTCCAGTTGATgattttgaagaagaagaaga
agtgaataaagaaaatgattatCAGCCCAAATGTACACCCCCTGAACGAT
GAGAAGGTTtcatacttctagactatacaCATAAGATGAGCACCAAAATT
GTAACTAGAAAATTGGAGAAAGAAAATGCAACTTTGCACTCTATAGCATG
CAATATATGCCATAATGGCGGAGCAGAAGTTGACAAATACTTTAAAACAT
GTACCAGAGTGGTGGATAATGAAACAGGTATTTTTAAAGCCTCTTTTCGT
GGAAGATGTTTAATGGGGAAGAATGTTCAATTACCTGATGGTTATAAAGg
tGTTGTGTTGAAAGAAACGGCTTCCGTCTATTCTGATCAGCAGGATCGAA
CTCTTGAAATCACAGaacattttgaccaaatgaCGTATTGGAATTTGGAA
ACGAAACCAACACAAAACGACCAATTTGTCACTTCTATGGACTGGTTGTC
GGCCGCACAAgttctACATGCTCCAGTTGATgattttgaagaagaagaag
aagtgaataaagaaaatgattatCAGCCCAAATGTACACCCCCTGAACGA
TGAGAAGGTTtcatacttctagactatacaCATAAGATGAGCACCAAAAT
TGTAACTAGAAAATTGGAGAAAGAAAATGCAACTTTGCACTCTATAGCAT
GCAATATATGCCATAATGGCGGAGCAGAAGTTGACAAATACTTTAAAACA
TGTACCAGAGTGGTGGATAATGAAACAGGTATTTTTAAAGCCTCTTTTCG
TGGAAGATGTTTAATGGGGAAGAATGTTCAATTACCTGATGGTTATAAAG
gtGTTGTGTTGAAAGAAACGGCTTCCGTCTATTCTGATCAGCAGGATCGA
ACTCTTGAAATCACAGaacattttgaccaaatgaCGTATTGGAATTTGGA
AACGAAACCAACACAAAACGACCAATTTGTCACTTCTATGGACTGGTTGT
CGGCCGCACAAgttctACATGCTCCAGTTGATgattttgaagaagaagaa
gaagtgaataaagaaaatgattatCAGCCCAAATGTACACCCCCTGAACG
ATGAGAAGGTTtcatacttctagactatacaCATAAGATGAGCACCAAAA
TTGTAACTAGAAAATTGGAGAAAGAAAATGCAACTTTGCACTCTATAGCA
TGCAATATATGCCATAATGGCGGAGCAGAAGTTGACAAATACTTTAAAAC
ATGTACCAGAGTGGTGGATAATGAAACAGGTATTTTTAAAGCCTCTTTTC
GTGGAAGATGTTTAATGGGGAAGAATGTTCAATTACCTGATGGTTATAAA
GgtGTTGTGTTGAAAGAAACGGCTTCCGTCTATTCTGATCAGCAGGATCG
AACTCTTGAAATCACAGaacattttgaccaaatgaCGTATTGGAATTTGG
AAACGAAACCAACACAAAACGACCAATTTGTCACTTCTATGGACTGGTTG
TCGGCCGCACAAgttctACATGCTCCAGTTGATgattttgaagaagaaga
agaagtgaataaagaaaatgattatCAGCCCAAATGTACACCCCCTGAAC
GATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033004XLOC_033004Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052113-proteinTCONS_00052113-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052113-exon-scaffold_210-1491911889:115840..116014TCONS_00052113-exon-scaffold_210-1491911889:115840..116014Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1510915933:115840..116014TCONS_00052113-exon-scaffold_210-1510915933:115840..116014Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1575043694:115840..116014TCONS_00052113-exon-scaffold_210-1575043694:115840..116014Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1491911889:117053..117124TCONS_00052113-exon-scaffold_210-1491911889:117053..117124Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1510915933:117053..117124TCONS_00052113-exon-scaffold_210-1510915933:117053..117124Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1575043694:117053..117124TCONS_00052113-exon-scaffold_210-1575043694:117053..117124Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1491911889:117882..117925TCONS_00052113-exon-scaffold_210-1491911889:117882..117925Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1510915933:117882..117925TCONS_00052113-exon-scaffold_210-1510915933:117882..117925Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1575043694:117882..117925TCONS_00052113-exon-scaffold_210-1575043694:117882..117925Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1491911889:118235..118354TCONS_00052113-exon-scaffold_210-1491911889:118235..118354Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1510915933:118235..118354TCONS_00052113-exon-scaffold_210-1510915933:118235..118354Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1575043694:118235..118354TCONS_00052113-exon-scaffold_210-1575043694:118235..118354Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1491911889:119938..120038TCONS_00052113-exon-scaffold_210-1491911889:119938..120038Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1510915933:119938..120038TCONS_00052113-exon-scaffold_210-1510915933:119938..120038Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1575043694:119938..120038TCONS_00052113-exon-scaffold_210-1575043694:119938..120038Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1491911889:121055..122437TCONS_00052113-exon-scaffold_210-1491911889:121055..122437Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1510915933:121055..122437TCONS_00052113-exon-scaffold_210-1510915933:121055..122437Clytia hemisphaericaexon
TCONS_00052113-exon-scaffold_210-1575043694:121055..122437TCONS_00052113-exon-scaffold_210-1575043694:121055..122437Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_210supercontigscaffold_210:115840..122437 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.14 28.169 16.9209 14.0228 7.47227 5.80706 15.7262 15.976 13.4938 15.9712 10.4055 7.49272 8.04578 6.24607 5.80533 8.1244 10.4094 11.6737 2.38408 4.21168 5.91533 5.1761 13.0565 10.8386 6.36688 9.24546 11.6868 10.6844 17.2251 17.1817
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013924RNase_H2_suC
Vocabulary: Cellular Component
TermDefinition
GO:0032299ribonuclease H2 complex
Vocabulary: Biological Process
TermDefinition
GO:0006401RNA catabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006401 RNA catabolic process
cellular_component GO:0032299 ribonuclease H2 complex
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052113 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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