TCONS_00052176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052176
Unique NameTCONS_00052176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2371

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052176 ID=TCONS_00052176|Name=TCONS_00052176|organism=Clytia hemisphaerica|type=transcript|length=2371bp
GTGAAAACGTAATCTATGGGATAAAAGGGACGAGGTGTGATGATTAGGAA
CGAAACCTGTGTAAAAAAGATTGATTTATATTCGATTATATTGCTTAATC
TATCTATTTCAAGCGATATGGAAAACCTAAGGAAAATTTGGAGTCTTAGA
GATATCACTAAATTTTATGATTGAGAAATATTTAAATCACGAAATTGATT
TGTGTTGAAAATTTATCTATTTCAAAATGAGGAATAGACCCATCAGAGTT
TGACTGAATTCGGGACTGAATTATGTGCAGGGATTTGGAAATAAAAAACT
GAAATTCTAACCTTTGaattataatgtttttattCCAACTTGTACACATT
TTTGCAGTGTTTAGTCTGATTTGTTTTGAACCATCATCCGGCAATAAAAC
GTCCCCCGCATCACCTGGAAATGCAGGACGCAATGCAACAACACCATCAT
CACCTGGTAATGCGGGACGCAATACAACAATACCATTATCACCTGGTAAT
GTGGGACACGGCGAGCATGTGCAGAACGATCCAATGTTATGGTTACAACA
TAACGTGTGCACAGTACGATACTCCTTCCGAGACATCACAAAATCCTTTC
AAAATTGCACATTGATTAAAGAACGTAATCCAATATGTGGGCGTGACATT
ACTGTTGTCTATAGCCCGAATCCACCCTTCGCTATGGAAGGCAAGAATAG
TTCTGCTGGATTTGGGACAGGGCAATACAAAGGCATCTTATTCGGAATCC
TCGAAGAAACTATCATCAAAACATGTTGTATGAGTTGTAACAAGTTGAAT
ATATTGCCACCTGTCGGATTCATCGACAAATTCCACAACCGTGAAAAATA
TGACTTGATTTTACCTATCGAGGGTggagaaaataataaaatgtttttct
cgaCACCCTTCTATCCATTGATGACTCTTAAAGCTATCGCGTTCATCGGG
AAGCCCCCGGTCCAACCGAATGTTGATTTGTTGGAGATTGTTTTCGATAC
TGTCTGGTCAAGTTGGTCTCTCGTATTGCTGGCAATTATGATGGCATTTG
CTGCTGGATCGGCTATCTGGGTGTTGGACACATGGTACAATAAACCACAA
TTCCCACGCTCCTTTCCAAGAGGACCATTCGAAGGATTTTGGTGGGCTTA
CGTATCCATGACAACTGTTGGGTACGGTGATCGCACTCCTCAATCGATCG
CAGCTCGACTTTTCGCGATCGTTTGGATCCTTATTGGTATTGTGTTCTTC
AACGTGTACACTTCTATGTTCACATCGGTCTTGAGTGTTCGCATGGGAAC
TAATGTCCAGTTCAGCGTCCTTGGTGAAAAAGTTGGAATCTTGGAAAACA
CATCAGCACCTTTCGTTGGAGCCAGTGCAAATATGGCTCTTATACAAGTT
TATCCGAATCTTTCTTCATTGGGAATCGCTCTTCGTGATAATGAAATCCA
CGCAATTGCAATGGTTGAACTGGCTGCGTTGTTTCATTTGGATTACTTCA
AACGTTTTGACAGTTCAGTGGATATCCAACACAGAACAGAGATCAGTGGG
TCAACATTGGGTGTGATTACAGCCAACATAGATCTGTTTGGTACTATTAG
CACCTTCTTTGATGCGAATGAGGAAAGTTTACAAGCAATCATCACAGGAG
CTGTCATGTCTCAGGTCGATGATTTGGGCTACTTcattagaaagaagaaa
acagacaCCGAATTTACGAGTCTTTTCATTTCTAGCAGTAAAATATGGTA
CGGTTGTCTTATGTTTGGTGGAGTTACTATCGGGCTTGGCATTCTGGGAT
GGTTTTTGAATTATGGGATAAAACACAGAAAATTAGCACGAAATAAAGTT
GAAAAACGAACAAACGATGACAATAACACTCGACCACCAGTGAAACCCTC
CAAATGGATTGGTTTTTATAATAGCCAATATAAAGAATCTTGAACCTTGT
AATCTTGCAAACCAAAGCAAAATCACTGGTGGATAGTAGGGTTAACCAAT
TTATTAGGTTAACCCCGAtcttcattaatttttgcaaaatatttcagttg
TCAAatgattaattatttttttgacatttacaTTAACGTTGGAgattacc
ttattggtatatattttcgcgtgttacaagagttttttggtcaattttcg
cgaaatttaataccgtttaaatttttcaaaattacaaaatcgcgaattta
aatacacgcaaaaaaatttttcttagtattttgttagtatttttacatca
aaaacgttgtgtttcaagcaaaatcagtctttttcttgctNatttttctt
agtattttgttagtatttttacatcaaaaacgttgtgtttcaagcaaaat
cagtctttttcttgctttata
Run BLAST on NCBI

transcript from alignment at scaffold_212:32938..43428+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052176 ID=TCONS_00052176|Name=TCONS_00052176|organism=Clytia hemisphaerica|type=transcript|length=10491bp|location=Sequence derived from alignment at scaffold_212:32938..43428+ (Clytia hemisphaerica)
GTGAAAACGTAATCTATGGGATAAAAGGGACGAGGTGTGATGATTAGGAA CGAAACCTGTGTAAAAAAGATTGATTTATATTCGATTATATTGCTTAATC TATCTATTTCAAGCGATATGGAAAACCTAAGGAAAATTTGGAGTCTTAGA GATATCACTAAATTTTATGATTGAGAAATATTTAAATCACGAAATTGATT TGTGTTGAAAATTTATCTATTTCAAAATGAGGAATAGACCCATCAGAGTT TGACTGAATTCGGGACTGAATTATGTGCAGGGATTTGGAAATAAAAAACT GAAATTCTAACCTTTGaattataatgtttttattCCAACTTGTACACATT TTTGCAGTGTTTAGTCTGATTTGTTTTGAACCATCATCCGGCAATAAAAC GTCCCCCGCATCACCTGGAAATGCAGGACGCAATGCAACAACACCATCAT CACCTGGTAATGCGGGACGCAATACAACAATACCATTATCACCTGGTAAT GTGGGACACGGCGAGCATGTGCAGAACGATCCAATGTTATGGTTACAACA TAACGTGTGCACAGTACGATACTCCTTCCGAGACATCACAAAATCCTTTC AAAATTGCACATTGATTAAAGAACGTAATCCAATATGTGGGCGTGACATT ACTGTTGTCTATAGCCCGAATCCACCCTTCGCTATGGAAGGCAAGAATAG TTCTGCTGGATTTGGGACAGGGCAATACAAAGGCATCTTATTCGGTGAGA ATGAATATTGCTCGTCGcaacgcccccccccccacacTGGAAATTCGGTC AAAAAACCTCATTTGCAGATATCCTAAGTCATAAGCTTCTGCTGTTTCAG TTAATAAATAACCCTACTACCCTActaaacaatttttatttttgtgaaaa cataTAAGCAACTTAAAAGGAGCATATTTTAAAGTGACTTCCAAGGGGGT AACTCGGAACCATTATCTTTTGAgagaatttatgattttttttgaactTG CCAACGTTCTTTGCCTAATGTAGGACTTGCACTGGTGTGAAAATGGAACC TATGAACTTTTAACTTTAAATCTATGATTTTAGGAATCCTCGAAGAAACT ATCATCAAAACATGTTGTATGAGTTGTAACAAGTTGAATATATTGCCACC TGTCGGATTCATCGACAAATTCCACAACCGTGAAAAATATGACTTGATTT TACCTATCGAGGGTggagaaaataataaaatgtttttctcgaCACCCTTC TATCCATTGATGACTCTTAAAGCTATCGCGTTCATCGGGAAGCCCCCGGT CCAACCGAATGTTGATTTGTTGGAGATTGTTTTCGATACTGTCTGGTCAA GTTGGTCTCTCGTATTGCTGGCAATTATGATGGCATTTGCTGCTGGATCG GCTATCTGGGTGTTGGTAAGTGTTTTGAAAGCAAGTACAGAACATGTCAT ATTCAACGTTTGGATTTTTGCTGGACCCACGTTGAAgagcttaaaaatct tttaccatttttattttttcctgcCAATAGTGGGGGTTAATGCGAGTTAT GTCtggaaaaagtttttatggATAAAGAACTGGGGGTGATattacccttg ccgaccgacggggtgTGCcgctgatttttgaaaaatggaccctgcgTGGg actcatttaaaaaaaaaaaatccatatttttccaaatttccccAAAAAGC TCTACGAGGGACagattttggtgtttttgcgaccctaccaggAACCCatg gaggtgaaaaaaggtaccgGAGTGGAACATCTccgtacccctttttgccc aagtaccccccccccagccCACGGGAAAAAACTCTTAACTCCTAAAATAA GTTAAAAAGTCAATGGTTCTTCAAAGTTTAATTTAACCCTATTCTtatag gcttttaggggcggttcaaaactagggggcttttcctgtagccatccctt taacttttgatctagtgggtctttttggacgaaatttggcacacaagatc cttatcacataaggtaacttttgataaaaaaattttcttctcataaatag ctattgtattctaaggctttagaaaaaagttgcctgagtttaaaatactt attttatcctaaatattcaataaattacagttcaaacgatatatttgaca taagaAATAAATTCGttttggaaaagtgtcaatttttgtgacaccttact ttCAGAAAtatcatcatgctcaaggtatataaaattttaggtgtctattt ttttttttttgaagctaaataaaggTTTacagaatttacagaaaatttca tggtaAAAGCTtaattatttcaggagctattaccaataatttggCCTCTG AACAGAaaccctaggccgaatagggttaaggaaaATAGTTGACACCATTG CATTCAGAGCATAAAATTCTGAgcccggggggtacttaggcaaatggagg gtacggtatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggggta aatttctaaaaattgttATGTCCTCTACCCACCAGATTCGATTTTTTTGG AAGAGTCTATTGAGAGAAttaacaataacttttatttttacagGACACAT GGTACAATAAACCACAATTCCCACGCTCCTTTCCAAGAGGACCATTCGAA GGATTTTGGTGGGCTTACGTATCCATGACAACTGTTGGGTAAGTGGCAGT GAGGTTTGAACCAcaaatttataaagcccgaagggctacatgtcatgctt taagccatcgcaggcaaaaaaaattaatgttggaaaaaatattgttgcta ttattttcgaaaacccgaagcgaagcttctgattggtcaagcactgaaat tctattgtaaagtcACGTAATCTAGGTAGgtatttcctacctaaccacgg cacactttccAGCTAAAGCtttacatctagcccttcgggctataAATCTG TGGTTTGAACATAAAAGGGaacaaatgaatgaaaatatttgtaGAACGTG TTTACGTTATCAATACGATCCAAGAATTCTCCACATTTTATTCGCAATGT AGTAATCAGCAGAGGACCTTGAGATAAGTCGAATAAACGTCCCCTGGTTA TTTTTTTAGCTATCAAAAGCTGAATTGCTCTAAAGGGGTCTAAATAAACT GGTTTTAGTAAAAATACCCTTTTGAGGTTTTTTAGATGTACAATTTCCAG CACCATCCCGGATCCCAGAATTTTGAACCCTTACCTTTTCGGGATCTTAG AATATTATTTTTAATGTTAGTGATTGAAGTGGGAGAATTCTTCAGGACTA AAGGGGCTGGTAACGATGTTTATCTAATTTATTCTTAAATTGAGATCGAT CGATCACATCGCATCATTTTAGGTACGGTGATCGCACTCCTCAATCGATC GCAGCTCGACTTTTCGCGATCGTTTGGATCCTTATTGGTATTGTGTTCTT CAACGTGTACACTTCTATGTTCACATCGGTCTTGAGTGTTCGCATGGGAA CTAATGTCCAGTTCAGCGTCCTTGGTGAAAAAGTATGAATGTTTTTTAAT TCAGACAGAACTTTATCTTATATTTACTTTGAGCTTCAACAAAATCGTAA AACtttttgcctgacagcaaacaatttgcaaaaaaatatgcagttgacgc tctctaaagaCCGATCTTCACTTTCGCGTGAAAATGAGCAAACAGTTTTT ATCAATCGTTCCTTAACCTTTTGACCCCAaatgccgtacatatacgtcTT TGATACGTTCCTAATACCGTACATTTACGCAATTTGGTAGACACGTCTTT CTCGTGCCATATCTTTTATTGGCTTGCTTGGTAAtcgttcaaaaaagaag aaaacgaaagtggaaaGCTTTCCGTTGATATGACAACGGAACAGCGGGTT TGAAAGGAATTCGATTTTTAGAACaaagcgtcgtttatgagagttttctT TTGACGGTGTCTTTCAAAATCATCGAGCGTCGTATccaatagtagaacgt cgaaatTTGGGAGTGTCAACAGAGCTGAAATGGCTCTTATTGGACAGAAG ACTtatgtttcttttttactttctgACATAGGTTGGAATCTTGGAAAACA CATCAGCACCTTTCGTTGGAGCCAGTGCAAATATGGCTCTTATACAAGGT agattaatttcaatttttcattttgcatTATCAAAATTNGATCACATCGC ATCATTTTAGGTACGGTGATCGCACTCCTCAATCGATCGCAGCTCGACTT TTCGCGATCGTTTGGATCCTTATTGGTATTGTGTTCTTCAACGTGTACAC TTCTATGTTCACATCGGTCTTGAGTGTTCGCATGGGAACTAATGTCCAGT TCAGCGTCCTTGGTGAAAAAGTATGAATGTTTTTTAATTCAGACAGAACT TTATCTTATATTCACTTTGAGTTTCAACAAAATCGTAAAACtttttgcct gacagcaaacaatttgcaaaaaaatatgcagttgacgctctctaaagaCC GATCTTCACTTTCGCGTGAAAATGAGCAAACAGTTTTTATCAATCGTTCC TTAACCTTTTGACCCCAaatgccgtacatatacgtcTTTGATACGTTCCT AATACCGTACATTTACGCAATTTGGTAGACACGTCTTTCTCGTGCCATAT CTTTTATTGGCTTGCTTGGTAAtcgttcaaaaaagaagaaaacgaaagtg gaaaGCTTTCCGTTGATATGACAACGGAACAGCGGGTTTGAAAGGAATTC GATTTTTAGAACaaagcgtcgtttatgagagttttctTTTGACGGTGTCT TTCAAAATCATCGAGCGTCGTATccaatagtagaacgtcgaaatTTGGGA GTGTCAACAGAGCTGAAATGGCTCTTATTGGACAGAAGACTtatgtttct tttttactttctgACATAGGTTGGAATCTTGGAAAACACATCAGCACCTT TCGTTGGAGCCAGTGCAAATATGGCTCTTATACAAGGTAGATtaatttcc atttttcattttgcattatcaaaatttcattctttaaAATTCTTTACAAG GGTGGGTATAAACCTTTACTTTAGCCGGTAAGTCCtagaaaaaacaacag aaaaagaaGGTCATTATAAACTTAGTCAGGGAGGTAAAAGGACagcaatg ttatttttgtgttttcagTTTATCCGAATCTTTCTTCATTGGGAATCGCT CTTCGTGATAATGAAATCCACGGTAAGCTTTTTACgcgtaaaaaaattga aaagttttaacATGAATGTCTTCAGGCTACCTTTTCTGGAAGATATTTGT CcggaaaaaaagaagattctCTTCTACAgtaaactctcgcttattcgagc TTCTATTGTTCAACTTTTTCTacaattcgaacttgtttccagtccccGTC AAAGAGAAACCTTCTCAacgaacttctataattcgaatctctctgtaatt cgaacaaataagatttccCGTGAAAGCTTGTCTCTACTTGtgctagacga tgttatcgtccgttacagtgatagtaaaggcgggaaaaaatggcggtatg gcgttatggcggtatacggaaaaaaatcggcgggagagtttcgaagactg gcaactctgtcgactgttaactcttttcggcaaaaaaacccgtttgcgaa ttttcttcggctttgagcttttttcttagatagtgattcgtcttagacta taacatagtctataCTTGTGCtcgctgcgatcgcaccttttggcttcaat cctttttgcttggaaaaaagattacgtcataaaaatgtagcgcgctcgaa attttttgttcttttgatcAATAGTGTGGAAGCTTCGCTCAataaagtgc gatcgcagcgtgCTCTCTGTCTTATTACATGTAATAACTCGTCTTTTTAC CACCATCAAGCAATTGCAATGGTTGAACTGGCTGCGTTGTTTCATTTGGA TTACTTCAAACGTTTTGACAGTTCAGTGGATATCCAACACAGAACAGAGA TCAGTGGGTCAACATTGGGTGTGATTACAGCCAACATAGATCTGTTTGGT ACTATTAGCACCTTCTTTGATGCGAATGAGGAAAGTTTACAAGCAATCAT CACAGGAGCTGTCATGTCTCAGGTTAGATATATCGTTTGATACGTTATCA GTTTATTGAAAGTTGCTGAAAATGTTGCGCCCGCTCTAAGACTTTTAAGA ACTTTCGCGACTTTTGGCCTCTATTGCAAAATTCTTAACAAGGCATTAAT TAGAGTTTATGCAcgtgaaatattctttcaaaaattgaaattctatAGAA ATTCGAATTTGTGATGAACATCAAATTTAAAGTATATGTtaagtaccctg agtatcagaggttaagttttcaaaaaatatattaacctctgaagacaaat aatagaaattttatcgcgcatgtgtcaatctaatcactgtNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgtc atggttacttttgtcttcgttgattgcgcgctgaatagaatctcgattcg tcggcacagcgtcaatatatgattttgacctgtgctattcacggtatATG TTAAGCCTTCTTATTAATGAATTTAATCATTTTACTCCGAGAAAGTAAAT TTCACGTAAGTTTCACGATTTTTGTACCTTGGAAATAATCTGAACAGGAT TTTTTATAGTATCCCGGCTGATGATAATACTAAGATGACATTAATCCCCT ATGGttagaaagaaattttaaattttcaggagCTGATAGTTTCTTTAGAG TCCCCCTCCCCTGTTGAGTGGATTAAGTTGACTTTGGAGCCATGCTGTCA TCAGTTAAATGGATAGTAAAGGTGGGAAAATAAGGATGCGCATTTACAGC CGTAATGTCGTTATACTTATACGTAAAAAATTGGAGGTAACGTTTCTGAA ACCGTCAGACTTTACCGAATTTatactcttttcggcaaaaaaaaaacagt ttgtGAATTTCTTCGGGTCTCAGATCGTGATTAGTCTCAGTAGTTAGATA TCTCATTATAACAGTTCTCACTTTCTCTTTCCAGGTCGATGATTTGGGCT ACTTcattagaaagaagaaaacagacaCCGAATTTACGAGTCTTTTCATT TCTAGCAGTAAAATATGGTACGGTTGTCTTATGTTTGGTGGAGTTACTAT CGGGCTTGGCATTCTGGGATGGTTTTTGAATTATGGGATAAAACACAGAA AATTAGCACGAAATAAAGTTGAAAAACGAACAAACGATGACAATAACACT CGACCACCAGTGAAACCCTCCAAATGGATTGGTTTTTATAATAGCCAATA TAAAGAATCTTGAACCTTGTAATCTTGCAAACCAAAGCAAAATCACTGGT GGATAGTAGGGTTAACCAATTTATTAGGTTAACCCCGAtcttcattaatt tttgcaaaatatttcagttgTCAAatgattaattatttttttgacattta caTTAACGTTGGAgattaccttattggtatatattttcgcgtgttacaag agttttttggtcaattttcgcgaaatttaataccgtttaaatttttcaaa attacaaaatcgcgaatttaaatacacgcaaaaaaatttttcttagtatt ttgttagtatttttacatcaaaaacgttgtgtttcaagcaaaatcagtct ttttcttgctNatttttcttagtattttgttagtatttttacatcaaaaa cgttgtgtttcaagcaaaatcagtctttttcttgctttata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033041XLOC_033041Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052176-exon-scaffold_212-1491911889:32938..33681TCONS_00052176-exon-scaffold_212-1491911889:32938..33681Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:32938..33681TCONS_00052176-exon-scaffold_212-1510915933:32938..33681Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:32938..33681TCONS_00052176-exon-scaffold_212-1575043694:32938..33681Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1491911889:34021..34352TCONS_00052176-exon-scaffold_212-1491911889:34021..34352Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:34021..34352TCONS_00052176-exon-scaffold_212-1510915933:34021..34352Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:34021..34352TCONS_00052176-exon-scaffold_212-1575043694:34021..34352Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1491911889:36331..36425TCONS_00052176-exon-scaffold_212-1491911889:36331..36425Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:36331..36425TCONS_00052176-exon-scaffold_212-1510915933:36331..36425Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:36331..36425TCONS_00052176-exon-scaffold_212-1575043694:36331..36425Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1491911889:37110..37269TCONS_00052176-exon-scaffold_212-1491911889:37110..37269Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:37110..37269TCONS_00052176-exon-scaffold_212-1510915933:37110..37269Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:37110..37269TCONS_00052176-exon-scaffold_212-1575043694:37110..37269Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1491911889:38657..38723TCONS_00052176-exon-scaffold_212-1491911889:38657..38723Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:38657..38723TCONS_00052176-exon-scaffold_212-1510915933:38657..38723Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:38657..38723TCONS_00052176-exon-scaffold_212-1575043694:38657..38723Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1491911889:38906..38959TCONS_00052176-exon-scaffold_212-1491911889:38906..38959Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:38906..38959TCONS_00052176-exon-scaffold_212-1510915933:38906..38959Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:38906..38959TCONS_00052176-exon-scaffold_212-1575043694:38906..38959Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1491911889:39648..39859TCONS_00052176-exon-scaffold_212-1491911889:39648..39859Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:39648..39859TCONS_00052176-exon-scaffold_212-1510915933:39648..39859Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:39648..39859TCONS_00052176-exon-scaffold_212-1575043694:39648..39859Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1491911889:42722..43428TCONS_00052176-exon-scaffold_212-1491911889:42722..43428Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1510915933:42722..43428TCONS_00052176-exon-scaffold_212-1510915933:42722..43428Clytia hemisphaericaexon
TCONS_00052176-exon-scaffold_212-1575043694:42722..43428TCONS_00052176-exon-scaffold_212-1575043694:42722..43428Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_212supercontigscaffold_212:32938..43428 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.00140185 tpm) - - (3.93893 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0164354 0.0373695 0.0123986 0.0190961 0.0599813 0.0416208 1.21011 1.25945 2.05962 1.84122 1.48851 1.77473 0.993626 0.00140185 0.0373103 0.0200909 0.244975 0.334395 1.81304 3.93893 0.863702 0.967596 0.169812 0.287972 0.513989 0.749509 0.0928782 0.0647323 0.0183722 0.0499719
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
2004006008001000120014001600180020002200Sequence
Match NameE-valueIdentityDescription
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