TCONS_00052187 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052187
Unique NameTCONS_00052187
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1535

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052187 ID=TCONS_00052187|Name=TCONS_00052187|organism=Clytia hemisphaerica|type=transcript|length=1535bp
CTTAGATTATTGTAAGTGCACAATATGAAAGAAAGGAATAAAGGATGTCT
TGCCAAAATCCATTCGACACCTCCATCATTCTGATACCTCAAGACGAAGA
TGGAATTTGTTTTTGTGGATATATCATTATTGCAGTTGGATTGTAGCTGG
GATGTTTCGCAAACACTTAAAGGGTACGAAGAAGCTATTCAGAAGGTAAT
NTTGTAGCTGGGATGTTTTGCAAACACTTAAAGGGTACGAAGAAGCTATT
CAGAAGAAGCTCAATCAAAGCTCATCAATCCACGAATTTTTGACAGAACT
GAAAGCTCTTGTGGAAAATATCACCTCTTTCTCATCTTTGAATGACCGCC
CAGATGACATTGGCTCACATCAACTTACGGAGATTTTCCAAGAAATTGAA
CAGATAGGCTGGGACAAgtTGGTTTTCACTGACAATAATTTCGGGACTTT
GAAATTTGTGCACTGTGACAAAGAATCGAGAGAGCATATTTTGGTTCTTG
AAAGACAGGGTGCTTTTTCCGATTTTGTTGCATCGACAAATCTTCCTGTA
AACCTACAACAGAAGaaaaatGAGAAGATTCTTGTTAAATACAATAAATT
CGTTAAGATAGTAGACAAATGTCAATTATTTTGGAATGTTCTAAAGGATT
TGGACGAAGAATGTTGGATATTGGAGCCTGAAGTTCCATCATATGATTGT
CAATATCGAAGAATTGCACTCGGTAAGAATGCTTCATTGAGAATCGATGT
CAACCCACTGCAACCGTCCACCTTCCCAGAATGCCGTTTCCTTGGTCCTT
CTACTGttaTCGATCCattaaagcaaaatttgaataaacaCATGCACCTA
TGGGACGATCAGAAAGATTTGTTGGACAATTTACGAACAGTACTTGACAT
CGAATTCCCATCGAAGACAACCGTGGAAATCAATGAATTACGTGTTGAAT
GTGGTATTTGTTATGCATATCAACTGGAGGACGAGATTCCTGATAAAAGT
TGTGAAGATACAAGATGTGCTCAAACTTTTCACTCATCATGCTTACTTGA
GtGGATGCGATGTCTTCCCTCATTCCGTCAAAGTTTTAATGTAGTTTTTG
GTCAATGTCCATACTGTGAAAAGAAATTGACCATCAAATTGAAGAAATGA
ATATCGATTGGGTGAAAAGGAGCGAAAATAAAGATTGTAGCTCGGAATAT
TACGGGCAAACAAAATTGTACAATAATTAATAATGGGTATATTTGTGGAA
CTTATTTTCTATTGCGATGGAACTATGGTATGGAGTTGTTCAAGATGAAT
ATGCTAGCTATGTAGAGGAAAAAAACTTATNcacaggaaaaaattattga
ttcccTAGCCTAGGGATTGTTCATTTTCAGATGTGTTTTTTTATTCGATC
ACATTAGTctagaatttaaagttcgggaaAGTAAGGAACTTAGGGAAACC
TATTTTCCTATGCTGGAAGTGTATTACCAATGTGTTAGTGAAAACGGATT
TCCACATGTggaaaactaatatttttaacattCTA
Run BLAST on NCBI

transcript from alignment at scaffold_212:45667..61087-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052187 ID=TCONS_00052187|Name=TCONS_00052187|organism=Clytia hemisphaerica|type=transcript|length=15421bp|location=Sequence derived from alignment at scaffold_212:45667..61087- (Clytia hemisphaerica)
CTTAGATTATTGTAAGTGCACAATATGAAAGAAAGGAATAAAGGATGTCT TGCCAAAATCCATTCGACACCTCCATCATTCTGATACCTCAAGACGAAGA TGGAATTTGTTTTTGTGGATATATCATTATTGCAGTAAGTATATTGAGCA AAATCATTTTTTTGTCCAAAAACCTTTAGAACTTTGAAAACCTTCTAAAA TGATGAATACAGGATTATCTTTTTTATTGAAATATATCTATTTTTTCAAT ACTTTAAGTTTCTTATTTTTAAAACACATGGGCACCGGCGAGCCATTTTG AGTGAGGGGGCCAAATATTTGGAAAAAAATGTCGCCCACCATGGTTGGGC GACAAATAAAATTTGTCACTTTTTACACCCTCAAAACACCTTAAAACGAT ATATATTTGGGGAGAATAATAGTTTTTGTGCTTTCATTTGGTCTCAAACC AAATTAAAATGGTAACTCTTAAAAACGTATGACATGGTCTTCCAAAAAGG GGGGGGGCCATGGGGCCCCATTGTAGTAAGTGCTCTGAGTTGACTTTTCA ACGATATATACAGGAGTGTTTAGAAAATTGAACATTTCTTTCATTATTCT CTTTAGAACAAAGATGAGTTTAGAGTAAACATACACCTCAAAGAAAAAGG TTCTCTGAAAGATGCAAGGTCAGATTCTTATTTGGAGTATGATGATTATA TCTATCTATAGCGCCAACAATAGCTCCTATTGAAATTTAAGGTGGTCTGG CTTATTTAGTAAAAACTTGTCTTCATATTTTGAGTACATTGTAATTTTAA TCATTCATTTAGGTTGGATTGTAGCTGGGATGTTTCGCAAACACTTAAAG GGTACGAAGAAGCTATTCAGAAGGTAATNTTGTAGCTGGGATGTTTTGCA AACACTTAAAGGGTACGAAGAAGCTATTCAGAAGGTAATTTGTTAGCATT ACCTACAGAGGCCGAGAAGGGTCTCCATGTGAGTTCTTTTAAAAATTGTC GAGATCTTTAAGCTGATGAGTCAAGATTTCTTTCAAACTGTTCCACCTCC AGAATGTGTCGCAAAAACATGGTTTCAGCCCACTTTTCAGGTGCCCCTGA AAAGCATGGTGCTCCCAACGAGTTAGGTCCCCTTGAAAAATTGCTTTGAG TTAGGTACCCCTATTCAGCAGATAATTTCTTTGAATTGACACTTTTTGTT CTTTTGTCATTCCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAT AGCAAAAGATGGCGTGATGGGAAACAAAAGAAAAATTGGATGGGAAACTA GGTGCTAGGATAAAAAAATTCAATAATTTGAAATATTTTGAAATATTCGA TTTGGAAAATATTACCAGCCTCCAGAGCCTCCATCAAGACAGCTAGGTAC CCTTAATGAATAGGTAACCCCAAAGAATTGCAAGGCATTAGCCCCCCTCT ACTAACTTGGCCTAGGTGCCCTTCAGATTTCTGGGGGGGGGCTGATACCA TGAAAAACATTTGCTTTCCCAAAAGCTGTCATATTTCCTAGAACTGCTGC GTTTCCAAAATCTAAACTAAACTACCACTTTTTCTTGATGTGATCAGAAG ACCTAAATTAATTATTCTTTTTAACAATGGTAAAAAAAACTCAAAAACTG AATTTTGTGGGAATAGACGATATCGGCTTAACATGAAAAGTCAGATTTGA CCTCCGAGAATCCCTCACAATGCGTTGCGTGGAAAAAAGTTTGCTGTGAA ATATTTTCCACGCAAATCATTGTGGGGAATTCTCGGGGGTCAAATCTGAT TTTTCATGTTAAGCCAATATCGTCTATGAATTTTTTCATTGTTAAAAAAT TAGATCCCTAGGAAAGGTAGATGCATGTATATTTCATTTTACTAATGATT TTAACACTCATGATATATATACAATATCTTCAAGGACCCATTAGCTAAAT TGGTTGTAATTGACGTAAAATCAGTCAATAGACATTTTAATGGTGTATTT CATGAATTTAAAAGGATGAATGAGCCAGTGACGTTTAACAAAATCTTTTC TGATCTCACTTTAAACAATACTATAAACAATACAAAATTTGGCCCAAATG GCGAAAATTTACCGTAAGGCTGGACTTAAAAAATTTTTGGTTTGCCGTCA CCCGACCGACCCTACCTCGAAACCTGCCGACCCAAAAAATTTATTGCCAT TTTAAATAAGATTTTTTTTCCTTCAAAAACTTCAAACAATAAAAAATCAA AACTCGCATCTTGTTTGTCTCAAGCATAATTTCCCTGCTAGCACTTCTGT TTTTTATTCAAAATTTCCTAAATGTAAACAAACTGTTAACCCTTCCATGG ACGAAAATTTCATAAATCGCCAAAATAAAAAAAAATTCCGACCGACCGAC CCACCTCCAAAATCTAGGGTCGGGTGATGGCAAACCAACAATTTTTTAAG CCCAGCCTAATTCGGTCTAATGTCGACATCCCTCATCTAACTCTGACACC CTTTTTATCAGTTGAAATTGATAGAAAGGTCAAAACTATTTTTCTTTGCT TAGTGGTCAGAGAGGAATAATCCTCTTTCAATCAGTGATTCAAACTTTCA TATTATTCCTGTCTCTAAAGAAGGGTGTCGGAATAACACGAGGGATGTCG ATATTAGACCAACTTACGGTAATACCACAAAATGTAACTTTTTCTCTTTT TTTCCGACTGCAAACATTAGTTCTCTCCGGGTTCCTTCCAATCAGAAAAA ACTTATAATTGAATTTTTGTCTGGATAAAAGATTTCGAGGATGTTACCAA ATTTTTCGTTCAATTTGTTGTTGTTTAAAATGATGCGACAGATTGAATAT TAAAGCAGCTTGAACACGACAAAACATGCAATGCAGGGTAAATGCTAATT TTTTTGGTGGCCAGGTTTCAAGGTAGGGTCAATCGGATAACAGCAAGCCA ACACTTAAATCTAGTCTATCTCTTATTCAAGCTAGAAAATTATACCCTCT GTTAGTCAAGTATTTCTACAATTGAAATAAATTTCATTGTCCCATATATA GATCGAATAGCTAAAAAATAATTTTTTTATTGAAGTTCCCAATTCTTATA TCATCATAGAAGCTCAATCAAAGCTCATCAATCCACGAATTTTTGACAGA ACTGAAAGCTCTTGTGGTAAGTTATTATTTTTTTAATAAAAAAGGAAAAA ACAAAACTTTTAATTTGCCTTTCTACTTTTGCCTCTTGTATTCGCTTTCT CAACCTTTCAGATGTCTGATTTTAAAATACCAAGGAAAACTTTAAACATG ATGGGTTTCAAATTAAAAAAAAAACACTTTAAAACAGCTTATCATAACTG TCCCTATCGATGCGATACATAGGCTGTGCACATCCCAAGAATTGATTTTG ATATAGGGATGCGTATCATGTATAAAAACACACGACACATGTTTTGATTG CAATGCAAAACTTTCCATGAGTTATTTTCTTTACAGGAAAATATCACCTC TTTCTCATCTTTGAATGACCGCCCAGATGACATTGGCTCACATCAACTTA CGGAGATTTTCCAAGAAATTGAACAGATAGGCTGGGACAAGTAGATCAAA TTTTTATGAAATATGAATTTAGAATTTAGGCTATTTTGCTATACTAAACA CTTAACTTTAAGGTGTTCCTAACAAATTAAAATTTACTCAAAGTTATGAC AAAAGATTGAAATTATTCAACTTTTCTAAAAAAGTAGTGCACGCCACTTT TAATACAATACAATTTTTTTCAGGTTGGTTTTCACTGACAATAATTTCGG GACTTTGAAATTTGTGCACTGGTAATTATAATTATGATTTTCACTTACCA AGGCTCATCCAATCCCGGGACCATTGCGTTTGAAGTCAAGAAAGAGAGGA ATCTTAACCTTTCTCAAGTAAGAAAAAGTGAAGCCTTGTTTGCCTCACAT TTAGGACTTTTTTTGAAAACACGCGGTTCACGTGTTTTGGATGGGAAATA AGCTGCTTTATTTCCCATCCAAGAGTTTCGGATCCAGCCCTTTTGCGGCT TTGAAATCAATGGGGTGTACTGCCCTTGTCGACCAACAGGGCGTGCTGAA GTTCGACAAAATAGACCCTACGTGGGACACGTAATTTTGAAAATTTTACC AAAATTTGCGTAAAAGGTGACGCTGAATTGGACTAAAATTCCAAATATTC TTAAAATTTGGGCATTCAACATGCTTTCCTTGTAGAAAAAAAGAAAGAAG CCCGAAGGATTGAAAATGATATCTTGATCTTTCCTCAATCCACTTTTACG AACAAGATTCATAAAAAGGGCTCTTCCAGAAAAAATCCGTTCATGGGGGG TGGAGGATATATTATTTTTTTCATGAATTACCCCTGGACATTTTGATTTT TAACCCCCTGGACAAACNNNNNNNNNNNNNNNACAAAAAATTACCCCTGG ACATTGGAATTTACCCCCTGGACATTGCAATTTTTTGGTATTTTTTAAAT ACCCCTGGACAATTCATCCTCCACCCCCCCATGAACGGTTTTTTTCTGGA AGAGCCCAAATGACGTTTTTAAAGATTCACATTCATTACATCGCGACAAA TGGGGTTTCCATGTTTTGACGTCAAAGAATCGAACGTCAGAAAAGACGGG GGTAAACATTCGAAAATATGTCAAAAAGAAGACAAGAAAAAATAATTTGT GATTTTTCCTAAGTAACAACGCTTATTTATTCATTTTTCATACTTCTTTG ATGAAAGAAGTATATATTTTTGAAAAGTAAAATACTTCGTCTATCATTTA CTCTTTTTTGAGCTCTTTACTCCAAGGATTTCTCATTTTGTCAGCCGTTG AACTTCAGTGCTTTTTCGAACAAAATTCTTAAACCCTCCTGTGTTCCAGG GTTCGTAGAAAATCGTGGGCATTTCTTTATCTTGCTAAGGTCCATCTTTC TTTGAAATTCAATCTTAGACCTTTCCAAAAATGTATAACAAATACAAAGT TTCAGGTCTGCGATGCGGTGATTTTTCACTTTGAAAAACAGAGACATTTT TCCTTGAATTCCCCTAATGTTTGTTTACATGTCAGGGAAAACCCGCATTT AACAATAGNTGGTGATTTTTCACTTTGAAAAACAGAGACATTTTTCCCTG AATTCCCCTAATGGTTGTTTACATGTCAGGGAAACCCCGCATTTAACAAT AGCAAAAAATTTGGAGGTCAAAACATTCGAAAAGTATAATCAAAGGGCTT TCCAAATATGTATAATGTTATGGGGTTTCCTTTTGAAGAATGTTGTGATT TTCGAACAAGAAGAGATGGCATAATAAAAACTTTTCTAAAATCTAGATTT TGACGTAAAGGGCATAGGGAATTTTAGCATGAGTATTTCTTAGTTTTTAA TTTCATAAAGAGTTCAAAGCATTTAAAAATCCAAAACATATTTTACATTG ATCAACAAAAGTAAATTAAACATCGAGCTGGGTTTGATTTTCAAACTAGC AGCCTAATTTTCAAATATTACTGGAAAATAGTCTTACTGAATGAAGAACT TCGAAAAAAAAATACCTTTTTCGCACAAATGGCCGACAGTTCACAGATGT TTCTAGCTACTCATTCTTTTTTGCCATTTTTCATTTCCAAATTAAATAAA AACTTACTGGTCATCCTTGGGAGTTTTTTATATCCAAAATTGAATCACCA TTTGATAAGAATAAATTTTAGATAAATAAAGGCTGCCTTCGATAACTGAA TTTTGAAGGCAGGAAAGTACTGTGAAAACTGAAGCAAACAACAAAGCATT CCATTTTATACATACCTCTTTCAATCGAATCTCAATTTAATTAATTTTAC AACTTTCCTTTATTCTCAAGTTTTATTTTTAAGAATGAGAGTAATAATTA AAGCACGATCAGGTTTTATTTTTTGAAAAACTCAATGTGTTCTTTTCAAA AGCCAAAGTCTCAAATGAAACTTTTTGTTTTGATTTTGATTGCAACATTT TCGAATCTTTCGAATGCGTGACGCAATTTGATTGGCACAAAATAGAACGC GCGCGAAAAAACAATGCAATGCAATCTTCTCTGAGATGACAAAAATCGCA ACACCAATTTCGCGCGATGATGTTTGGCTGAAACCTTCAAAGAATTTTTT ATATTTTATCTTTTAGTGACAAAGAATCGAGAGAGCATATTTTGGTTCTT GAAAGACAGGTGAGCTTGAGACTTGCTCTACAAAAATCTATGTTTTAGGC TCATAGGATTTAGCTTTCTTCATAAGTACCACCATGCAAAAAAACTTTGC AAAAGGCAATTCTACAGAATCGTTTCTTTACTGTTTAAGATAATAATATC TGTCTTTTCAGGGTGCTTTTTCCGATTTTGTTGCATCGACAAATCTTCCT GTAAACCTACAACAGAAGGTAAAGCTCTAATTCATCTCTTTGTTATAAAT TTGTTTCTATTTTTTGGTGATTGAAATTTTTAGAAGCATTATCGGCTGGT GAAGAATTCCTGTTTTTTCTAAATAGATCCCTGGTGGATTCCCATCCAGT GAATTCCCACCAAGCTCCATGGCGGATTCTTACCTATTATTTTTGCTATG TTACGTATTTTTTATCAAGCTTTTTTTAGAGAAAATTCCAGAATGAAAAA AGCCTCGAAATGCAATTTTTCAAATATTTCTTTTCGACCACGAAAATTAG TTCCCGCGAAAATTAGTTCCAATAGGGTAGTAGGGGGAACATTGTTCGTT TTTCTGAGGTCGCTTGATTTTTTTAGTCAACGCAGTTGTTATACATTTTT GAAAGCTAAGGGGTAGGTAGTAGGGGAATCAAAATAACTTGGGTGCCAAT TTTTTTTTCGGACACTTTGGTGTGATTTTGGGACAAATATTACGGTCTCA GGTAAAAATCATAGGGTCAAAAATTTATGAAAATTTTAGCTTGAGAAAAC GGAAACTTGTTGTATACTTTTGGAAAGCTTTAAAAATAGTAAGATTACAG ATGTATTGCAAGTATAGGTGATTTCTGTACCTAACTCGAGATATCAACCC TTAAAAACAGTGTTTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTTACG CTTTTTGGAGCTCAATATCTCAAGTTAGGTACTGAAATCACCTATCCCCG CAATATATTTCTAATCTTAATTTTTTAAGAGCTTTCCAAAAATATACAAC AGGTCTCTATTTTTTAAAGCTAAAATTTTCATTAAATTTTGACCCTATAA TTTTTGCCTGAGACCGCCATATTTGTCCCAAAATCACATCAAAGTTTCCG AAAAAAAAATGTTATTTTGATTCCCCTACCCCTTAGCTTTCCAAAAATGT ATAACAAGTACTTCGGCTAAAAATATCGAGCGATTTTACAAACTTCCCCT TACTAATACCCATTTTAATCATATTCTCTTTTCCAAAATGACAATTTTTC GAACCCTAGGCAAACACGCCTGTCTCCTCCGTTCATGGCAATTTTTTTGC GTTCTACCCTCTTTCATTGGATACCTCAGTTTATGCCTTCATTACTTACT CTTGTATGTCTACTTTTAGCTGATTGACTTGTTCGATTGACTGAAATTTG TCCCTGAAGACTAATTTGTCAAATAAAAGAGAATAATAACAGAAACAATT CGTTCCCATGATTATTTGGTACTTTGCAGACCTGTCTGTAAAATACACGT TGATCACCTGCTGGAACTGAGGAACTACTGGAGCTTTTGACTTTCACCAG TGATAGATATTAACCATTTAAAATTTACCTAAAATACTCACAGCGTAACC GCTCCTTCAATTTTGCTTAAATTTTGTCTGGAAGCTTGTATTATCAATAC TTAACTCTTTTCAAGTAATTAGCATTTACCAATTACTAGATACAGTATCC TAGGGCCTATTTAGATAAAAGAGCAATTTAGGCCGGTCTGTGAAATACAC GATACCAACAGGTGTCAAGAATTTATCCTGAGCCCCAATAATGCATGTCA CGTACGTGGAGTTGCCTCACAAAATTTAAGCAAAAAAATATAAGTGAATA AAGTTAGAGGGGGGTCATGTTTTCGGTATTTTCAAAGAGTGACGTCATCA ATGATGCCAAAATTTTAACAAAAGATGCCAATTATTTGGTGAACACTCAG GCACACTTTCTAAAAATCGAATCAATCGGATAAATATTTCAAAGATTATC AAAAAATTCGCCTTTGGCTTCTTTGTTGAATAGAAGGGTTAAAAGAAATT CATCTTTTTATCTTTATTTATTTTATTTTTTTCTTCAGAAAAATGAGAAG ATTCTTGTTAAATACAATAAATTCGTTAAGGTAAAATACTTCTATTCTGT ATTTTCCAGTAAAGTCATCATTAAGACTTCCAAAGACTTCCAGCAACCTT ATATTCTGACATGGATGTTGCTAAGCTGCCAAATTTCAGTCTTAACCAAA TTGAATGTTATTCTTTCTTTTATTTAAGATAGTAGACAAATGTCAATTAT TTTGGAATGTTCTAAAGGATTTGGACGAAGAATGTTGGATATTGGAGCCT GAAGTTCCATCATATGATTGTCAATATCGAAGAATTGCACTCGGTATGAA ACATAATTAAGTTTCTGATAATCTGAAATTTTATTCTGAAATCTTTATTG TTTATATTTATTCAAAGACCTGTATCCAGCTTATGGTGTTTTAAAGTCCG TGTCAAAAAGGTGTGCAGTGTTTAAATTTTTTACCAAAAGTTATGGCCAA AAATAAAACAACTGCAAACTTTTTAGGCAGTAATGTGCCTTTTCGGCTTG TTGTCTCTGTTCACTAGCTTGCCGCAAGTCGTATATTATTGCTATTAAAA TTAGTTGATTTCGTTCCGTTCCGTATCCGGAACTCTAACTCATCTTCAAT AAACTGTTCAATATTCTTCAAGAGTTCTGCATATTTTTCGCGTTGGATGG TCTCCTCTTGCCGAACATCACCCAAAGGATACTTATATCTATACACCAGC TCACCAATTGATGCTAATAGAATCACAAAAACTCCAATGAGAGCTGTATA AATCATTAGGCCTTTATCTAAGCCGTCGAAGATCTCATGTAACGGCCTTA TCACGTATTTGTTTGTTAATAAAGGACTGGCGATTGTTTTAGTAATGGTC TCCTTTTCATCTTCTAACTCTTCGTCCGACATTGCCATCTCATCATCTTC ACAATTCAAAACTGTTCTGTTATAATGAACAAACATTTTCAGACTTGTAT CTGTCTCCAATTCACGTTCAATTACTAAATCCTTCACTTCATCTTCGTGG TCTGCAAAGAAGGATGCTGCAGCATGTTTCTCCATCAAGCCAGCGTCTGC AGTACCGCTTTTCACTGCGTCGATAATTTCATCGTATTCATTAACACTTA CGGATGTACCCAATAAGTTTTTTCGCACGATCAAATCCTCGATGGATCTA TCTATAACAGCGATGCTTTTTCCTTTTGTATCATACTGCTCGTCGATAGC GTTCCAAGCAGAGGCTGTGATCAAAGCTACCAACATCAATCCAAAAATAA TCCAAATGATAACAATCAATCGACTTAATGGATGTTTAGGAGTTTTATCC CCATAACCTACAGTCGTCATAGTTACAACTGTAAACCAAAAACTGGACCA CAATCCGGTACCGGGCGATCGGGGAAAATGATCACTCCCGGCTAGTGTCT CAATTATCCAAACGATGGTTGCGATAATCAAGGCACAGAGTAAAGAAAAT ACAACAGCCGTCATACATCTTTGAAATGATTTCAAAAATTTGACCAAAAG TAGGACTTCACCCTTGCGCACTATGAGAACTGGTCGTGTGTGAATCAATT TTGATACCTCGTAAAAATTGTCATTCAAATGTTTCATATCATTATAAGTC ATGGGTCCAACCATTATCAAATCGTTTTCAGTAACTGTTTTACTCACATT TAACATTTCCAAAAGTTTTGTCTCATTCTTTTCTTGAATCAAATTCAACA TTTCTGTATGGTGAGCTATTCTGGTGATTCTTGATTCATCTGCCTTCGGA ATGACTTGATCACACAATAGAAGGGTGCCTCGTGTAATCAAATGATTGGC CAGTTTCCCATAAGGGTCTTGATCAAATAAATACAAATGAGTCTTGAACT TCATATCTTCCTCTTCTGCCTTTGATGGTGTCATCAAAACGCAAATAATT CCCATATGCAATAACTTAGTCATATTGCTAGTGAGTCTCTTTGAATTGAA TTGTCGTGGACAGTATATTTTTTGTTTTGATAAGTAAATATGGTAAATTG TCGCTTATTATAGCTCTCAGTACCTCATTGATCCAATAGATGGTATTATG TTATCGCTTTGATTTTCTTTTCGTACAGATGATATATATTCGCTTCAAAG ATTTTGTGTGTTTGATTTCTTAAAACTTTTTCTTTGAATTATTGAATTCT TTTAGCGTGGGTCGACTTGTATATACTCCTTTGATAAAATCCCTATTGAA ATTGTTCTCTTTCTTTGTATCAAGAAGTAATCTCGCTTCTATCGAACCTC TACTGGTTGCCCAAATTTAATTTATTATCCTTCTCAGCATGTAACTGGGA TGTAACTCAAAACAATTCTGACATAGCAGTTCTTCCTTTCCTTGTTTGAA ATCAAAAATTCTTTCTGATAAAATATTGATTTTATTATTATTTTTCCTTG CTATATTTATATTGATAACATTCATATTTCGATCGCCTTTCCACACTATA TTGATATTTTCACATTATTTTCCGCAATTTTTTACAGCCGACATCAATAA CTTGATTTCTTCATTCAATATGATTAACTATCGTCAAGTAACTTTTGACT TTTTCTCTTATTCAATCAGTTAGTTATGTTAACAACAAAACGCGAACGCA AAAGCAATCTGTTCGAAGATAGCAAGGTGTTAAAAAATTATGATGTTTTT AGAAAGCTCCTATAAAACAAAAACAAAAAATAGAAAAATAAAACTTGTTT TCTCCCTTTGNTAGCAAGGTGTTAAAAAATTATGATGTTTTTAGAAAGCT CCTATAAAACAAAAACAAAAAATAGAAAAATAAAACTTGTTTTCTCCCTT TGAATCTTGTTTTATGATGTTAAGAAGGTTCAAAAAATGAAATTATCATT GATTTGTTCCCAAAGTTTTGGCGGAGGCCCCCGCACATCAAACGGCTCAC TGGGACACGCGCAGAAAAATAATCTGCACCCATGCAATGAAAACTTTAAT GAAACCATTTTCCGTTGCAAAATTCTACCGAACTCGTCATTGCCGACAGG TTTAAGTAGTGAGGGGCACAACCCAAGACGGGTTTCCGATTCCACGTTCG GTTCGGTTCGGTTCGTATATAACCAAGCAGGTCGGCCATGAACACACGTA AAATGGCTAGTCGACGCCATTAGATTGGCATTGGAAAATTAATGTTTGCA GGAGTGGAGGAAAGATATATACAAAAAAGTTTTTCTTTTTCAGGGCTACT CTAGAAACAATCTACACTTTCTTCTCTTCTTAGGTAAGAATGCTTCATTG AGAATCGATGTCAACCCACTGCAACCGTCCACCTTCCCAGAATGCCGTTT CCTTGGTCCTTCTACTGGTAAGTCCGCAGTGAAGACCATTTTTAGCCTAC CCCTAATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCAT TGTGGGATTGTTTTGAGTGTATTACAATAGAATTGTAATTACATTACATT ATTGTAATCCACTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAA TCAAAACCTCCGATAAGGTCTATTAGGGGCAGGCTAAAAATGGAGAAAAA AAATTTGGATTACCAAAGCATGGTGTAAAAGGGGCCGGTGTAAAAAGGCC TTCCTACGCTTGTATTTTCGATACCGTCGTCGAAAGAACTTTTTTGTATT TTCGTCACCAGTCTCCTCAAAAACTGACTGCGCCGTTAAGGGTTGATAGG TGTTTTTCCCAGCTGGAACACAGCGTTGTTTTAACGTTAATCTAACGTTA TATGGATGTTGTGAACGTTAGATTAACGTTGAAACAACGTTGTGTGCCAG CTGGGTTGAAGCTTTCTCCTTAGAACTAAAAACTGTCCCATACCGCTAGA TGTCGTATAACATAACTCTCTGTAGTTTCAAAAGTTGAAGAAAACTCGCG GTCTCTTGAAAAATAAGTTGAAAAAGTCAACCCTTCCCAGTCGTTCTTTT CCCTTTATACAAATGCCCAGCTCTATACCCACCCATCCACAGTATCGTAT GGAACTTAGATAGTAGAAGAAGCGATGACGATGATAACTGGATAATGATT GTAAAGAAATTTATATGAATGTTTTTTTTTAGTTATCGATCCATTAAAGC AAAATTTGAATAAACACATGCACCTATGGTACGTTTTTCCTCTCTTAAAG CAACCTGACATGCATCTGAGTTAGGCATAATTCCATGCTCGAAACTCTGC TGCTCAATTAATTTAGACCAATGAAAATGCGATTTTATATGGATAAATTT TAGATAAATGTTTGGTAAACTGCTGCAGGATAGTAGTCAATAGGGTGCCA ATCTTCATTTTCAGAAAAAATTTTCTTAGGCACCACCACCCCTTTTCAGT ACCTGGTGCTAACATTTTTGAGAATCCTCATTTGAGAAAAAAATGGACTC AAACCCCTTATTTAAAAGCCAGTAATTAAGAAAATATTGGGTACATTACC CTGGAATATTGCCTTACCATACACACCTAGCATTCAATTTTACCTCACCA ATAAATATACTTCCGGTGAATGCAATCCGATTATTTTCGAGAATTTTAGC GAAAGATTTGAGAAGTTCAAGTTCTGATTTGTCGAAATTGGGGAATCCTT ACCCATTACCTACCTAAATCCAAAATCCAGGACAATAGCTTAAATATGAG AGATCTACCCAGCCCACCCCAAATATAGTACCAGATATTAGTATATAGAT ACCTCCACCCAGCTATTGGTCAGTACTCTGCAGCTGTTCCCCTGTTAATA CTCCTAAGACTATAATTATTGTTCAATAGGGACGATCAGAAAGATTTGTT GGACAATTTACGAACAGTACTTGACATCGAATTCCCATCGAAGACAACCG TGGAAATCAATGTAAGGAATTTTTGATCGTAAGATCNCTCCTAAGACTAT AATTATTGTTCAATAGGGACGATCAGAAAGGTTTGTTGGACAATTTACGA ACAGTACTTGACATCGAATTCCCATCGAAGACAACCGTGGAAATCAATGT AAGGAATTTTTGATCGTAAGATCTACTTTGATCAATATAGAAAGGTTCCA GAAAAACCTAACCTGGAGTCCGCTTAGGGCTCTTGATAGACTGGATGGTG CGATTAGGTGGCCCGGTAGTACATAGACAGCTACAGCTGCCTGAACTTTG CTCTGATGATTTTGAAGTAGACTAGAGGACATCGTAATCTTGAATTAATT CTAAATTCTAAAACCCAGTCAAAGTTTACAAAACTATATTAGCAACATCA AAATACCTCCTAAATTTGAAAAAAATAGTCTAATGGTCATATTTTTCTGT AAGTTTAGCTCCAAAAAGAGACTGGATCTACTGGCATAGATTTGCTACCA CCTCAAGCAAAGTCAAAAAATAGAGTCTGCTAAATTACGCCAGGCCATTT ATCAGCCCTATCCAGTCCATCAATAAGCTACATGTGCATTTAAAAGTTGC AAGTTGCGACTACATTTAAGGGAACTAATTTTCGCGGGAACTAATTTTTG CTGAACTTATTTTCGAGGTACAAGGATTCTAAATTGGCCTATTTTGCGGA ACTAATTTTCGCGGCTGGCACACACTTTTCGCCGAAATTCTTTCGTATTC CTTGGTTTTTTTGAAGGTTTTTGGTAAATTTACATTTTTCGGAACTAATT TTCGCGGTAGACACCCAAAAATGCGAAAATTATTTCTCTTTACATTTATC TGGAATAGTAAAAATTGAGTGCGAAACCTGACGTTTCTTTTCGCAGGAAT TACGTGTTGAATGTGGTATTTGTTATGCATATCAACTGGAGGACGAGATT CCTGATAAAAGTTGTGAAGATACAAGATGTGCTCAAACTTTTCACTCATC ATGCTTACTTGAGGTAAAATCAATGTCGAGAATTATTTTACTTCTAGTTT TTTCTTGTTAGCGATTTTTCAAGTTAGCAATAATCATATTTTTGTACATT ACTCATTACTTCGAGGCTAAACGTAGATTATAGTCCGATAGAATTAGCTC ATAAAAGGCCCTAACCTTGAAATTAATCATATGTGGCTGAAGTTTGGAAC CAAGAACCAACATAAAAACTGTTGTTGCATTTTTATGTTGACCTCAATTT TCAGTACAAACCTCTACAAACAAGATTTCCAAAAGAGATTTGAGCGTTTC GATGGTTAGATCAATAGATAAATGGATTTTAAAGATCAATTATTTTTGAT GAGTCAGTACACTTTAAGCAAATTAAGTCAGCAGAACTTTAAAAATCTTG GTTTAATCACTTAAACTAGGCTTTATATGAGTTTTCCTTATTTTCATTTT CCAGTGGATGCGATGTCTTCCCTCATTCCGTCAAAGTTTTAATGTAGTTT TTGGTCAATGTCCATACTGTGAAAAGGTAATTTCATTCTTTTAATGTTTG AGTTGAGTGTATAAATGCTTTCAAATGACTAGCCTCCAAATGGGTGTAGC CGACTTTGTTGTGCAATGAAATTTCTTTTGACTAAATTATCTTGGTTACT TTTCTTTAGAAATTGACCATCAAATTGAAGAAATGAATATCGATTGGGTG AAAAGGAGCGAAAATAAAGATTGTAGCTCGGAATATTACGGGCAAACAAA ATTGTACAATAATTAATAATGGGTATATTTGTGGAACTTATTTTCTATTG CGATGGAACTATGGTATGGAGTTGTTCAAGATGAATATGCTAGCTATGTA GAGGAAAAAAACTTATNCACAGGAAAAAATTATTGATTCCCTAGCCTAGG GATTGTTCATTTTCAGATGTGTTTTTTTATTCGATCACATTAGTCTAGAA TTTAAAGTTCGGGAAAGTAAGGAACTTAGGGAAACCTATTTTCCTATGCT GGAAGTGTATTACCAATGTGTTAGTGAAAACGGATTTCCACATGTGGAAA ACTAATATTTTTAACATTCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033044XLOC_033044Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052187-exon-scaffold_212-1575043694:60954..61087TCONS_00052187-exon-scaffold_212-1575043694:60954..61087Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:60154..60275TCONS_00052187-exon-scaffold_212-1575043694:60154..60275Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:57722..57778TCONS_00052187-exon-scaffold_212-1575043694:57722..57778Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:57298..57401TCONS_00052187-exon-scaffold_212-1575043694:57298..57401Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:57067..57114TCONS_00052187-exon-scaffold_212-1575043694:57067..57114Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:54679..54721TCONS_00052187-exon-scaffold_212-1575043694:54679..54721Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:54470..54526TCONS_00052187-exon-scaffold_212-1575043694:54470..54526Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:52558..52599TCONS_00052187-exon-scaffold_212-1575043694:52558..52599Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:52295..52409TCONS_00052187-exon-scaffold_212-1575043694:52295..52409Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:49271..49354TCONS_00052187-exon-scaffold_212-1575043694:49271..49354Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:48460..48505TCONS_00052187-exon-scaffold_212-1575043694:48460..48505Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:47727..47808TCONS_00052187-exon-scaffold_212-1575043694:47727..47808Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:46725..46841TCONS_00052187-exon-scaffold_212-1575043694:46725..46841Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:46212..46283TCONS_00052187-exon-scaffold_212-1575043694:46212..46283Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1575043694:45667..46078TCONS_00052187-exon-scaffold_212-1575043694:45667..46078Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:60954..61087TCONS_00052187-exon-scaffold_212-1510915933:60954..61087Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:60154..60275TCONS_00052187-exon-scaffold_212-1510915933:60154..60275Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:57722..57778TCONS_00052187-exon-scaffold_212-1510915933:57722..57778Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:57298..57401TCONS_00052187-exon-scaffold_212-1510915933:57298..57401Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:57067..57114TCONS_00052187-exon-scaffold_212-1510915933:57067..57114Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:54679..54721TCONS_00052187-exon-scaffold_212-1510915933:54679..54721Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:54470..54526TCONS_00052187-exon-scaffold_212-1510915933:54470..54526Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:52558..52599TCONS_00052187-exon-scaffold_212-1510915933:52558..52599Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:52295..52409TCONS_00052187-exon-scaffold_212-1510915933:52295..52409Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:49271..49354TCONS_00052187-exon-scaffold_212-1510915933:49271..49354Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:48460..48505TCONS_00052187-exon-scaffold_212-1510915933:48460..48505Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:47727..47808TCONS_00052187-exon-scaffold_212-1510915933:47727..47808Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:46725..46841TCONS_00052187-exon-scaffold_212-1510915933:46725..46841Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:46212..46283TCONS_00052187-exon-scaffold_212-1510915933:46212..46283Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1510915933:45667..46078TCONS_00052187-exon-scaffold_212-1510915933:45667..46078Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:60954..61087TCONS_00052187-exon-scaffold_212-1491911889:60954..61087Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:60154..60275TCONS_00052187-exon-scaffold_212-1491911889:60154..60275Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:57722..57778TCONS_00052187-exon-scaffold_212-1491911889:57722..57778Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:57298..57401TCONS_00052187-exon-scaffold_212-1491911889:57298..57401Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:57067..57114TCONS_00052187-exon-scaffold_212-1491911889:57067..57114Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:54679..54721TCONS_00052187-exon-scaffold_212-1491911889:54679..54721Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:54470..54526TCONS_00052187-exon-scaffold_212-1491911889:54470..54526Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:52558..52599TCONS_00052187-exon-scaffold_212-1491911889:52558..52599Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:52295..52409TCONS_00052187-exon-scaffold_212-1491911889:52295..52409Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:49271..49354TCONS_00052187-exon-scaffold_212-1491911889:49271..49354Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:48460..48505TCONS_00052187-exon-scaffold_212-1491911889:48460..48505Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:47727..47808TCONS_00052187-exon-scaffold_212-1491911889:47727..47808Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:46725..46841TCONS_00052187-exon-scaffold_212-1491911889:46725..46841Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:46212..46283TCONS_00052187-exon-scaffold_212-1491911889:46212..46283Clytia hemisphaericaexon
TCONS_00052187-exon-scaffold_212-1491911889:45667..46078TCONS_00052187-exon-scaffold_212-1491911889:45667..46078Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_212supercontigscaffold_212:45667..61087 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.220918 0 0.260677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052187 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FANCL1.502e-8037.97E3 ubiquitin-protein ligase FANCL OS=Homo sapiens ... [more]
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