TCONS_00052321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052321
Unique NameTCONS_00052321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3541

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052321 ID=TCONS_00052321|Name=TCONS_00052321|organism=Clytia hemisphaerica|type=transcript|length=3541bp
CCCGTATTCAAAGGTCGACCTCGAAAGcggaaaaatattcaaaacccTTT
CTCGAACGATGACGCCGTCACAAACAAAAAGATCAAGACAATCGACATCA
AATCAAACTCTACGAAACAACCGACTCAAatcaaaattgaccataaaacG
AATGGTAGAATCGGTCCTATTCTGAACAAACCGATTGAAATTCATCCGCC
ACCTCCTGTCAAAAGAGTGGTACTTGATCTTCCGAAACCTGAGCCTCCTC
CTGGGCGAGGCGTACGTGGGAGAGATACGATTTgtcatgaaaaaagagaa
tacacattaaagGATAAAGAGGAACACCATCGATTCTCAGAAGATTTGCA
TCGTTACATGTTGAACAATGGAACACCGATTCTCAAGATACCACGTATCG
GCTGTGCGCCAGTCAACCCATTGGTTTTGTACAGAGCTGTCATGGATAGA
GGCGGATTTGCACAGGTAACATTACATCGTAATTGGCGAGACGTATACGA
TTGTTTGGGCCATTCCACTATGATCACAAACGCTGCTACTGCTACAAGGA
AGCTCTATGAACGAATGTTGCTTCCCTACGAGAACCACATGCGTAGTAAC
CCTGGGAACCCTGGGAAAAGAATCAGTGACAAACGCGCTCACCAAGCCAC
CCTACCAAAATTCAGTTCCAATGATCTTATACGACCTCGAGAACATTTTG
AACACAAGAATCCTGAGCAACAGACACACAGACAACAGCAACAACCTATC
GTTATCGCACCAAAAGTCCCGCATGTTAATAGTATGCCACAAAACGCAGT
TAACAGTGCGGAAAATCTCTCTATTTCCTTAATGATGTCCAAACAACGTG
GTCGCCCGTCTAAGAAATTCCGTaaccaaatcgaaaaattacGGTCTCGT
CAAACGATGCAACTCAACGAAGAACAGCAACACGCCCCGATGTTTGCAGG
TAAAACCGCGCGCCTACCACCCCGCAAACAACCCTGGGTTAATGAACTTA
ACGTTGATATTGCTTCGCGTCAGCACACGGAAGTGCCAATGTCTTCAAAC
CCCGCATTTCGCAATAAAGATAAAGAAAGGCGGTTAAGTGATAGCTCAGA
TATAGAGCTTATTTCTCCGCGTCGGGGCACGGAGATCCACTCGCCGCTTC
GCCAGGGACGCCGAATATACCCTTCAACTAAAGATTCAGTGGGTACCTCG
TCAAGTGGAACGAACGGGTTTGTTCCGGACGCTTTTGTATCAAATGTACA
CAACTCTACGGATAAAGAGCAGCCTAATTCACAGAAAAAAGGTCAATGCG
AGTTCAAAATTCAATCAGTGCGTAGCTTAGCAACAGTTGACGAAAACAAG
CCTTCATCTTCACAGCAACCGAATGAAGCAGCCTCTTCAGGCACCACCCA
GTATGTTCATTATCCTTACAGTACAACGAACACTTATGAATATATTCCAA
CCAAATTCTATTCTCTAAGTGGTTCCAATAAACTGGTACCCATTAACGCT
CTACCTGTTGGAAACTCGGGAAAACAACCTACTCAGAAAGCAATGTTCCG
CGATGCTGGATTTTCGATGCGGACTTTTCGACACGATCAATCTGCAGACA
ACACTTCGTACAAAATCAAATCGACTGCTCTTAAAAATCACGAACCTTAC
ATAATACATCACCCTTCGCATTTGAATAGAGGTTACCGTGAAATTCCGGG
ACAATATCCAGTTATTTACACGCATCAGCCGGGTGTGAGAACCACTGGGA
AAAGTGAGCGCTCTACAAATTACGTAAGGCAAGATATGCGGTACGTCACG
AGTGCTCCCGTTGACTATAGCCCACCAAATGGTACTCTTGTTTACGGTCG
TGTGCAACCGCGCTACGAAAAAATCTCCCCACGTAGTTCCGGGACAACGT
CGACGCGTGGGCGAGGGCGTGGACGTGGACGACCGCCGTCACGCCCATCC
TCGTCTACAACTTACGTTAAATACATCGATCCGCCGGCACAATCAGTTCA
AAAGTGGCCTGCTGGTACAGAGCTATTGAAAGTTAAAGCCCATGTTAATA
TGTGATTTGTCCATTTTGAATAGGTcgatgaaaatgttttatttagtgct
ttgtttgtttgttcagAATATCTCTCgtagttttgatttttcgaaatttt
ttaattttttatgtaATACTTTTTACTTCGCTTGAATGATCAGGAACAAA
TGCTTTCTCCTTCAGATGCTTCTATATTTCGCCTGAttggtagtctgaat
cgcagacctctatagacaATATATTGGTCTatcagaaacttttttcgcca
GAAGTTGACCAGAAGCCTACCTAATGTGCCTCGCCTCTGTTTTTGACCAT
CAATAAGCCTTCTTTTGTCTATATACTTAGCTTTTCAAAGTAATATTGTT
GCCTGTTTGGTCGATTGGATGAAAGGTTAAACCTTTAagttaaggctttt
tttttcACTACAAATTAATCGAAAGCGGTTTAAGTCATTTTTTAAAATGG
ATTGTAAAAAAAACCtcgatacacgctttttttttataagaatggtgtaa
atccatttcatcatggattttctaaacttttttgggaaaatcatcctgaa
atattcttacagcattcttaggttaggatcctattCACTGGATTTAatat
ttagtacatacgtctcaaacataaatttttgtgaaaggagtgagccttat
ttgggggtaattgacaattcaattgaaaatgctctaaaaatgacattctt
agcttgagtagcaaaattccatgatggtgatattcttagcatattcttaa
ttttttggccatttttatcatggacattcttataaagtgtattcttattt
taaaaaagcgtgtacacgtCTCGACACCTGAAGatatttaaattgaaaat
ttacttcaaggtcattatttttatgaaatttcgtTCACTAAATGATTATA
TTTTTATGCAAATGTACATAAAACCCTAAAACAATCtttattttttcctc
ttttcagttTTACTATACTACAAGGCCTACAACGTttacttaaattttga
tttttccagtTCAATTTTTAGTTGTAGTTTTATATAACTccgttttattc
atttttacaGTAACAAAGTTTTTTTAGGAATTATTCTTTTATCGTGTACA
AAGTATTGTAGATAGATTATCACTACTCCAAAAtcgaataatttttttga
tttttgacaattttttcacgCCCTCAAGGGGCGTTTTCACCAACGCCGTC
TCTTTCTAGCAAGCATTCTATAATGTACTTATTGAATTCAGAGCTGCAAA
TAACGGGTAGTGATCGGTAATCATCAGACATTTTTTGGTTTCCACCGGCC
ATTTTGAAGagtaaattttacttttgtCCGGTGAAAACTTGAGATGGCTT
GTTGAGTAAATGTAACGAAGCACTTTCCCTGCTCTCTTTTATTTGTCAct
tgttttattttctcataATCAGTAGCATTCAATGACTAGAGAAACATTTA
GTGGTATTTTAAACCTAGATCTTGAGCTATTTTGTCactcc
Run BLAST on NCBI

transcript from alignment at scaffold_213:186463..196990-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052321 ID=TCONS_00052321|Name=TCONS_00052321|organism=Clytia hemisphaerica|type=transcript|length=10528bp|location=Sequence derived from alignment at scaffold_213:186463..196990- (Clytia hemisphaerica)
CCCGTATTCAAAGGTCGACCTCGAAAGCGGAAAAATATTCAAAACCCTTT CTCGAACGATGACGCCGTCACAAACAAAAAGATCAAGACAATCGACATCA AATCAAACTCTACGAAACAACCGACTCAAATCAAAATTGACCATAAAACG AATGGTAGAATCGGTCCTATTCTGAACAAACCGATTGAAATTCATCCGCC ACCTCCTGTCAAAAGAGTGGTACTTGATCTTCCGAAACCTGAGCCTCCTC CTGGGCGAGGCGTACGTGGGAGAGATACGATTTGTCATGAAAAAAGAGAA TACACATTAAAGGTATTATTTTTTATTTTTTATTTTGAAAGCAATCACAA TACCCTTGAAATAACCACAATAATTCAAACGGGCCTTGTGAGAATGACAG AAGCCTAACCGTAGCTCGGTCTTGTTCGGAGACCCATTTTGAAATTATTT TGACTCTTTTAATTCCTTTTAGTCTTTATTGGCCCTGAAAANCCAAAAAA TTTTTTTGATGATGTCACTCATCATGCCCAAAGTGAGCAAAAACCGAAAA TTTCCTTTGTTCTTATAAATAGCTATTGTATTCTAACAAAAGATTTAGGA AAAAGTTGCCTGAGTTTAAAATATTTTATCCTAAATATTCAATAAATTAC GGTTTAAACGATATATTTGACATTAAAAATCAATTTGTATTGGAAAAGTG TCAATTTTTGTGACACGTTACTGTCAGATATGTCATCATGCTCAAGGTGT GAACATTTTTAGGTGTCAAATTTTTTTTTATTTTGAAGCTAAATAAAAGT TGGGAATTTACAGAAAATTTCACGGCAAAAGATCTATTATTTCAGGAGCT ATTACCAATAGTTTGACCTCCGAACAGAATGAGCCCCACCCCCCCTAGGC CGAATAGGGTTAATGAACTTTCATTATTTTTCACAGTTCTCCTTGATCAC AAATTATTTTTCTCTTTGATTTCATTTAGGATGAAGTTGTGGAAGCTAGC CGTCAAGTTGTTGTGGAATGTTCCAAATTTGCTGCTTGGGAGTGTACATC AAAGAGTTGGCATCAAAGCTATGGGACCACTCTGTATGATGGAGTTGAAG TGGACAAGTTAAAAGCTCTCAGTAAAAATCAACAGAAAATCATACATAGA AATGATAACTCTCTCCGAAAAGTGAAAATTTTGAATTTCCCGCAGTACAA CCGGTACAAAACATGCATCAAAATGCTCAATCTTGGTGTTCCGATGACTT ACTTTCAGCTTTTAGCCAGGGGTGGTTTGGACATCAAGAATTTGAACACT TTGATTTTATTTTCTAAGAAACAATTTGAGAAAGAGGACGTGGAAGACTA CTCGCCAACACTAGACGTACCAGGTTGGTGAACTTAGATTTCAATTCTGA TACAGATCACTTGGTAAATACAATTTTCAAGATTTCATCTAGAGAAATTT TAAAAATGCGGAACCCTATTCGAGGTTATCTGATAGTCGACGTCAAACTT TTTACGACACGCTAAAGGCTCTGAAGTTTGGGGAAATCTTTAACTAGGGG AAGGTTTTCATTATTATAAATTCGATCTCTTGATTACTGATAGACAACGT CCTTTTCAACTCTTTACCCAAGATTTTGATATCCTCATCTTGCTTTTTCA TCAATTGAAAAACTTTACTTTTTCTGTATAGTTCCCGTATTCAAAGGTCG ACCTCGAAAGCGGAAAAATATTCAAAACCCTTTCTCGAACGATGACGCCG TCACAAACAAAAAGATCAAGACAATCGACATCAAATCAAACTCTACGAAA CAACCGACTCAAATCAAAATTGACCATAAAACGAATGGTAGAATCGGTCC TATTCTGAACAAACCGATTGAAATTCATCCGCCACCTCCTGTCAAAAGAG TGGTACTTGATCTTCCGAAACCTGAGCCTCCTCCTGGGCGAGGCGTACGT GGGAGAGATACGATTTGTCATGAAAAAAGAGAATACACATTAAAGGTATT ATTTTTTATTTTTTATTTTGAAAGCAATCACAATACCCTTGAAATAACCA CAATAATTCAAACGGGCCTTGTGAGAATGACAGAAGCCTAACCGTAGCTC GGTCTTGTTCGGAGACCCATTTTGAAATTATTTTGACTCTTTTAATTCCT TTTAGTCTTTATTGGCCCTGAAAATCATCAATTTTTGTGTATTTCAAGTT TTGGTGCGAATCACAGGGGACTGATGTTTTTTACCTAAGTATTGCGCCTT GCGCAATAGATAACATTTTTATTCACCTTGAAGTTTTTGACTGCGCTTTT TGACGATCCACCCTATTTCTGTTTTGTATTCTAAGTGTTGTTTTTATCTC TTGAATTGTTTTGAAATTCTCTAATAATCTTTCTTATCCGATTTTGATTG TTCCGTTTAGCCAGGATAATTAGTGTCGTGTAACAAATTATAAAAAACTG TAAAAACTTTCAACCGCGGTAGAAAATTTCGTTGAAAATCCTGCCGTAAA AAATCTGAATTCAATTAGTGATAAAGAAATGCTCACTTTCTTCGTTGTGA TTTACTTCATTTTTTCGAGGTCTAAATCAGCTTCTGTGTGAATATTGAAA GTCGTTTCATGGACAAATCAATCAATTCTACGTGTTTGATCTTGTTATGA AGCAAATTTGACACCAAACGTTTTTCGATAATAAACTATTCCTACTGCGT ACTAACTTAAGATAATTGTCCTAGCAGCTTGAACTCGATACTTCTAATGA TTCCAAGAAGGTATGAAATAAATGAGAAAACTTCCCGGTTGTCTAAAGTC ATCATTCATTCCTTTGATGTATCATTATTGGAGGCAAGGAAATTCAAGGT ACAATTTAAGCGGAAATAGGATGTTCAGTTGATTTAAAACAAACCTTATT ATTTTGCGAAAAATACTTGAAACCAGATGTTGTTTTTGTGTCGTCAATAT TGCTATCTTAAATCAAGGAACCTGTTTAAATCCCAGAATATGAGACTTTT TTTTAATGCAATGCATTTTTCTTAGGATAAAGAGGAACACCATCGATTCT CAGAAGATTTGCATCGTTACATGTTGAACAATGGAACACCGATTCTCAAG ATACCACGTATCGGCTGTGCGCCAGGTAAGGATTGAGGAAAAGCATTTTT NAAATCCAAAAAATCAACACTTTGTCTAGCCTGATAGCCCCTCTATACAG TATTTCCTACATTTGAAATAGGTAACTTTTCGTTAGAGGATGAGCCTAAG CTTACACTTTTTTGAAATGAGTGTCGTTACTTTGAGATGGCCTTGAAAAA ATACAATCCACAAAATGAAGGGAAAATGAAAGCAAAAAGGCCTTTAGTCT TATGTAAGCAAAATCGTGGCGTAACTTAAAGGTGTAGCATAATTTGCATT GGCACCAAAGATAAAAGATGTCGACATCCACACTTAAATTGTTTACTGTT TGATGAACTTTCATTATTTTTCACAGTTCTCCTTGATCACAAATTATTTT TTCTTTGATTTCATTTAGGATGAAGTTGTGGAAGCTAGCCGTCAAGTTGT TGTGGAATGTTCCAAATTTGCTGCTTGGGAGTGTACATCAAAGATTTGGC ATCAAAGCTATGGGACCACTCTGTATGATGGAGTTGAAGTGGACAAGTTA AAAGCTCTCAGTAAAAATCAACAGAAAATCATACATAGAAATGATAACTC TCTCCGAAAAGTGAAAATTTTGAATTTCCCGCAGTACAACCGGTACAAAA CATGCATCAAAATGCTCAATCTTGGTGTTCCGATGACTTACTTTCAGCTT TTAGCCAGGGGTGGTTTGGACATCAAGAATTTGAACACTTTGATTTTATT TTCTAAGAAACAATTTGAGAAAGAGGACGTGGAAGACTACTCGCCAACAC TAGACGTACCAGGTTGGTGAACTTAGATTTCAATTCTGATACAGATCACT TGGTAAATACAATTTTCAAGATTTCATCTAGAGAAATTTTAAAAATGCGG AACCCTATTCGAGGTTATCTGATAGTCGACGTCAAACTTTTTACGACACG CTAAAGGCTCTGAAGTTTGGGGAAATCTTTAACTAGGGGAAGGTTTTCAT TATTATAAATTCGATCTCTTGATTACTGATAGACAACGTCCTTTTCAACT CTTTACCCAAGATTTTGATATCCTCATCTTGCTTTTTCATCAATTGAAAA ACTTTACTTTTTCTGTATAGTTCCCGTATTCAAAGGTCGACCTCGAAAGC GGAAAAATATTCAAAACCCTTTCTCGAACGATGACGCCGTCACAAACAAA AAGATCAAGACAATCGACATCAAATCAAACTCTACGAAACAACCGACTCA AATCAAAATTGACCATAAAACGAATGGTAGAATCGGTCCTATTCTGAACA AACCGATTGAAATTCATCCGCCACCTCCTGTCAAAAGAGTGGTACTTGAT CTTCCGAAACCTGAGCCTCCTCCTGGGCGAGGCGTACGTGGGAGAGATAC GATTTGTCATGAAAAAAGAGAATACACATTAAAGGTATTATTTTTTATTT TTTATTTTGAAAGCAATCACAATACCCTAGAAATAACCACAATAATTCAA ACGGGCCTTGTGAGAACGACAGAAGCCTAACCGTAGCTCGGACTTGTTCG GAGACCCATTTTGAAATTATGTTGACTCTTTTATTTCCTTTTGGTCTTAT TTGGCCCTGAAAATCATCAATTTTTGTGTATTTCAAGTTTTGGTGCGAAT CACAGGGGACTGATGTTTTTTACCTAAGTATTGCGCCCAATAGATAACAT TTTTATTCACCTTGAAGTTTTTGACTGCGCTTTTTGACGATCCACCCTAT TTCTGTTTTGTATTCTAAGTGTTGTTTTTATCTCTTGAATTGTTTTGAAA TTCTCTAATAATCTTTCTTATCCGATTTTGATTGTTCCGTTTAGCCAGGA TAATTAGTGTCGTGTAACAAATTATAAAAAACTGTAAAAACTTTCAACCG CGGTAGAAAATTTCGTTGAAAATCCTGCCGTAAAAAATCTGAATTCAATT AGTCATACGAAATGCTTCTTTCTTCGTTGTGAATTACTTCATTTTTCGAG GTCTAGAGCAGCTTCTGTGTGAATATTGAAAGTCGTTTCTTGTACAAATC AATCAATTCGACGTGTTTGATCTTGTCTTAGCTATGAAGCAAATTTGACA CCAAACGTTTTTTGATAATCTTGTCAAATATAATTAAATGCCAAACCATT TCTTACTGCGCACTGACTTGAATTGTCCTAGCAGCTTGAACTCAATACTT CTAATGATTCCAGGAGAATACCCGGTTGTCTAAAGTCGTCATTCATTCCT TATGTGCCATTATTGGAGGCAAGGAAATGCAAGGTATAATTTAAGAGGAA ATAGGATGTTCAGTTGATTTAAAAAAAACCTTATTTTGCGAAAAATCCTT GAAACCAGATGTTGTTTTTGTGTCGTCAATATTGCTATCTTAAATCAACC TGTTTAAATACCAGAATATGAGACTTTTTTTTAATCCAATGAGTTTTTCT TAGGATAAAGAGGAACACCATCGATTCTCAGAAGATTTGCATCGTTACAT GTTGAACAATGGAACACCGATTCTCAAGATACCACGTATCGGCTGTGCGC CAGGTAAGGATTGAGGAAAAGCATTTTTTCGTGGTTTTCTGATTATTGCT CTGTTGATTATTTTTTGCAAATAATGCCTTTATTATGTAATACGATAATT GAAGTTCTGTTGTTTAGCTTCATTTAACTTCTAATGATTTTCGAAATTAG AACACTTGAATAATTTTGTGTCCATTTCAGATGACGATGGATGTTAGGAA AGTCTCAAAATTTCTTTTATCCCTGTTTGACCGATTGTCGTTTGCTAAAA TATTTCTGGAATTCGAAATAAATGCTCAAATTATTTCAATTCCTTTTTTA TTCTTTTTCAAGTCAACCCATTGGTTTTGTACAGAGCTGTCATGGATAGA GGCGGATTTGCACAGGTGAGATAACCATCCATGATTTATTTATCGTTTAA AAAACCTGTACGGGTCAACAATTAACGAAAACCGTGAACGTTTATACGTC TAAAGTATTCAATAGTGACTTCATATATTAACCCTATTGAGACCCCTGGT ATGACTGATACCTTTTGGAACAACCCGCAGATTTGACCAGCGTAATCGAG GACGGTAAAAGTGCTGATTTACTGTCGTCTTCAGTCCGTATAACTCTATC TATCCCTATCCGTCACAGGAAAAACGCCATACATAAACTTGAATTCTTGC AAGGCTTATGAAAAAGTAGGTGGGAACCAATGGTGTCCCCATCGAACTTA GGAGGATTTTTTTTCTTGTCAAGCGCTCACCCTGGGCGCTCACTTGTTGC TATCATCCTCGAAGGAAGTACTTATGATTTATCATTACGTTTACATAAAC CCAATTTAAATGATTTTGTGGTCTCGATGCAATATCTAGATTTTAATTCG ATTTTCAAATCGCAATAAGTTTGGCCACTTAAACTAAACTTGAAAACGTT GGGTCTTTCCTTTGTGACTTTCCATTGTCATCTTGTTGTCAAAATTAGAG AGTTGATGCGTGTTGTTGTGCTTATAAATCGCTCATATTCTGATTGCGTT GATCTTAAGTAAGTATTCAAGCTTCATGTTTTGAACTATCGTTTAATCTG GAGAATTTTTTAAATTATAAGATTTTTAGCATGTAGTTTTAGAAAGCTCT ACGTACTGGAAATATATACTCGCTACGTATAATCTTTCCATACAATATAA AGAAACCCGAAAACTGTGTTTGGCCGTTTACGATAGAAAAATGACGCAAC CAAGACTTGTGTGTGTTAAAGGTTTTTCAGTGTATCATTCTTTTTTCGCA GGTAACATTACATCGTAATTGGCGAGACGTATACGATTGTTTGGGCCATT CCACTATGATCACAAACGCTGCTACTGCTACAAGGAAGCTCTATGAACGG TAAGTACCGTATTACTTCAAATAAAACGCCCGCGCCCCGGGCGTTTATTA ATTCATTTCTTTAGGAGGGGGCATCTAAAAGGAGGGAGAGTTTATTAAAT AATCTATAATGAAGGTCACTTTTAAATGAAGTGTGAGTTCGAATCATAAG TTAGAGATGAAAAACAGGTCAAAACCAGTTTGAATTCAAAAAGAATACAA TTGTTATCATATATCTAAAGTTTCTCTTATTATAATTCCTTACATCTACT TGTATCAAATAAACTCCCCTCCTGGAGGGGAGGTGTTTATTTGAGGGGGC GTTTATTGAAAATTATCTCTCAAAAGAGGGGCGTTTAAAATTTGGGATCG TTTATACGAAGTAATACAGTACTAAAGCAATTGCCTATACAATCAAATCT CGTTAATTCAAACTCTATCATACCCATTTATCTTTGATTCGAACTAAAAT ATTGGTAAACATTTTCCCTCAGCTGGGAAACCGTATTCGAAAATATTTTC TATGTTGAATCTTTTTCTTATTCGAGGAAATGTTCCCTTTTAATCTTTAG AATGTTGCTTCCCTACGAGAACCACATGCGTAGTAACCCTGGGAACCCTG GGAAAAGAATCAGTGACAAACGCGCTCACCAAGCCACCCTACCAAAATTC AGTTCCAATGATCTTATACGACCTCGAGAACATTTTGAACACAAGAATCC TGAGCAACAGACACACAGACAACAGCAACAACCTATCGTTATCGCACCAA AAGTCCCGCATGTTAATAGTATGCCACAAAACGCAGTTAACAGTGCGGAA AATCTCTCTATTTCCTTAATGATGTCCAAACAACGTGGTCGCCCGTCTAA GAAATTCCGTAACCAAATCGAAAAATTACGGTCTCGTCAAACGATGCAAC TCAACGAAGAACAGCAACACGCCCCGATGTTTGCAGGTAAAACCGCGCGC CTACCACCCCGCAAACAACCCTGGGTTAATGAACTTAACGTTGATATTGC TTCGCGTCAGCACACGGAAGTGCCAATGTCTTCAAACCCCGCATTTCGCA ATAAAGATAAAGAAAGGCGGTTAAGTGATAGCTCAGATATAGAGCTTATT TCTCCGCGTCGGGGCACGGAGATCCACTCGCCGCTTCGCCAGGGACGCCG AATATACCCTTCAACTAAAGATTCAGTGGGTACCTCGTCAAGTGGAACGA ACGGGTTTGTTCCGGACGCTTTTGTATCAAATGTACACAACTCTACGGAT AAAGAGCAGCCTAATTCACAGAAAAAAGGTCAATGCGAGTTCAAAATTCA ATCAGTGCGTAGCTTAGCAACAGTTGACGAAAACAAGCCTTCATCTTCAC AGCAACCGAATGAAGCAGCCTCTTCAGGCACCACCCAGTATGTTCATTAT CCTTACAGTACAACGAACACTTATGAATATATTCCAACCAAATTCTATTC TCTAAGTGGTTCCAATAAACTGGTACCCATTAACGCTCTACCTGTTGGAA ACTCGGGAAAACAACCTACTCAGAAAGCAATGTTCCGCGATGCTGGATTT TCGATGCGGACTTTTCGACACGATCAATCTGCAGACAACACTTCGTACAA AATCAAATCGACTGCTCTTAAAAATCACGAACCTTACATAATACATCACC CTTCGCATTTGAATAGAGGTTACCGTGAAATTCCGGGACAATATCCAGTT ATTTACACGCATCAGCCGGGTGTGAGAACCACTGGGAAAAGTGAGCGCTC TACAAATTACGTAAGGCAAGATATGCGGTACGTCACGAGTGCTCCCGTTG ACTATAGCCCACCAAATGGTACTCTTGTTTACGGTCGTGTGCAACCGCGC TACGAAAAAATCTCCCCACGTAGTTCCGGGACAACGTCGACGCGTGGGCG AGGGCGTGGACGTGGACGACCGCCGTCACGCCCATCCTCGTCTACAACTT ACGTTAAATACATCGATCCGCCGGCACAATCAGTTCAAAAGTGGCCTGCT GGTACAGAGCTATTGAAAGTTAAAGCCCATGTTAATATGTGATTTGTCCA TTTTGAATAGGTCGATGAAAATGTTTTATTTAGTGCTTTGTTTGTTTGTT CAGAATATCTCTCGTAGTTTTGATTTTTCGAAATTTTTTAATTTTTTATG TAATACTTTTTACTTCGCTTGAATGATCAGGAACAAATGCTTTCTCCTTC AGATGCTTCTATATTTCGCCTGATTGGTAGTCTGAATCGCAGACCTCTAT AGACAATATATTGGTCTATCAGAAACTTTTTTCGCCAGAAGTTGACCAGA AGCCTACCTAATGTGCCTCGCCTCTGTTTTTGACCATCAATAAGCCTTCT TTTGTCTATATACTTAGCTTTTCAAAGTAATATTGTTGCCTGTTTGGTCG ATTGGATGAAAGGTTAAACCTTTAAGTTAAGGCTTTTTTTTTCACTACAA ATTAATCGAAAGCGGTTTAAGTCATTTTTTAAAATGGATTGTAAAAAAAA CCTCGATACACGCTTTTTTTTTATAAGAATGGTGTAAATCCATTTCATCA TGGATTTTCTAAACTTTTTTGGGAAAATCATCCTGAAATATTCTTACAGC ATTCTTAGGTTAGGATCCTATTCACTGGATTTAATATTTAGTACATACGT CTCAAACATAAATTTTTGTGAAAGGAGTGAGCCTTATTTGGGGGTAATTG ACAATTCAATTGAAAATGCTCTAAAAATGACATTCTTAGCTTGAGTAGCA AAATTCCATGATGGTGATATTCTTAGCATATTCTTAATTTTTTGGCCATT TTTATCATGGACATTCTTATAAAGTGTATTCTTATTTTAAAAAAGCGTGT ACACGTCTCGACACCTGAAGATATTTAAATTGAAAATTTACTTCAAGGTC ATTATTTTTATGAAATTTCGTTCACTAAATGATTATATTTTTATGCAAAT GTACATAAAACCCTAAAACAATCTTTATTTTTTCCTCTTTTCAGTTTTAC TATACTACAAGGCCTACAACGTTTACTTAAATTTTGATTTTTCCAGTTCA ATTTTTAGTTGTAGTTTTATATAACTCCGTTTTATTCATTTTTACAGTAA CAAAGTTTTTTTAGGAATTATTCTTTTATCGTGTACAAAGTATTGTAGAT AGATTATCACTACTCCAAAATCGAATAATTTTTTTGATTTTTGACAATTT TTTCACGCCCTCAAGGGGCGTTTTCACCAACGCCGTCTCTTTCTAGCAAG CATTCTATAATGTACTTATTGAATTCAGAGCTGCAAATAACGGGTAGTGA TCGGTAATCATCAGACATTTTTTGGTTTCCACCGGCCATTTTGAAGAGTA AATTTTACTTTTGTCCGGTGAAAACTTGAGATGGCTTGTTGAGTAAATGT AACGAAGCACTTTCCCTGCTCTCTTTTATTTGTCACTTGTTTTATTTTCT CATAATCAGTAGCATTCAATGACTAGAGAAACATTTAGTGGTATTTTAAA CCTAGATCTTGAGCTATTTTGTCACTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033089XLOC_033089Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052321-exon-scaffold_213-1575043694:196679..196990TCONS_00052321-exon-scaffold_213-1575043694:196679..196990Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1575043694:191338..191437TCONS_00052321-exon-scaffold_213-1575043694:191338..191437Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1575043694:190976..191028TCONS_00052321-exon-scaffold_213-1575043694:190976..191028Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1575043694:189992..190089TCONS_00052321-exon-scaffold_213-1575043694:189992..190089Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1575043694:186463..189440TCONS_00052321-exon-scaffold_213-1575043694:186463..189440Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1510915933:196679..196990TCONS_00052321-exon-scaffold_213-1510915933:196679..196990Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1510915933:191338..191437TCONS_00052321-exon-scaffold_213-1510915933:191338..191437Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1510915933:190976..191028TCONS_00052321-exon-scaffold_213-1510915933:190976..191028Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1510915933:189992..190089TCONS_00052321-exon-scaffold_213-1510915933:189992..190089Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1510915933:186463..189440TCONS_00052321-exon-scaffold_213-1510915933:186463..189440Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1491911889:196679..196990TCONS_00052321-exon-scaffold_213-1491911889:196679..196990Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1491911889:191338..191437TCONS_00052321-exon-scaffold_213-1491911889:191338..191437Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1491911889:190976..191028TCONS_00052321-exon-scaffold_213-1491911889:190976..191028Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1491911889:189992..190089TCONS_00052321-exon-scaffold_213-1491911889:189992..190089Clytia hemisphaericaexon
TCONS_00052321-exon-scaffold_213-1491911889:186463..189440TCONS_00052321-exon-scaffold_213-1491911889:186463..189440Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:186463..196990 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (0.546302 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0.120119 0 0.169959 2.20257e-06 0 0.0592316 0.236296 0 0 1.04134e-10 0.546302 0 0 0 0 0 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
500100015002000250030003500Sequence
Match NameE-valueIdentityDescription
back to top